View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13920_low_10 (Length: 374)

Name: NF13920_low_10
Description: NF13920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13920_low_10
NF13920_low_10
[»] chr7 (49 HSPs)
chr7 (19-365)||(39513978-39514324)
chr7 (19-121)||(2146667-2146769)
chr7 (19-121)||(4106769-4106871)
chr7 (19-121)||(4107340-4107442)
chr7 (19-121)||(23358216-23358318)
chr7 (19-121)||(31770527-31770629)
chr7 (19-121)||(25546270-25546372)
chr7 (19-121)||(32606325-32606427)
chr7 (29-119)||(44083973-44084063)
chr7 (19-121)||(47570713-47570815)
chr7 (24-121)||(41183846-41183943)
chr7 (19-119)||(8439111-8439211)
chr7 (19-119)||(40058271-40058371)
chr7 (31-121)||(27229484-27229575)
chr7 (19-121)||(5587311-5587413)
chr7 (19-121)||(5592272-5592374)
chr7 (19-120)||(38781203-38781304)
chr7 (19-121)||(43753748-43753851)
chr7 (19-121)||(25112242-25112344)
chr7 (19-121)||(7162785-7162885)
chr7 (19-121)||(28603042-28603144)
chr7 (19-121)||(47250246-47250348)
chr7 (19-121)||(47557812-47557914)
chr7 (19-120)||(48146785-48146886)
chr7 (19-121)||(4001839-4001939)
chr7 (23-121)||(11355854-11355952)
chr7 (19-121)||(29484750-29484852)
chr7 (39-121)||(13887202-13887282)
chr7 (31-121)||(5772826-5772916)
chr7 (19-120)||(27915575-27915677)
chr7 (19-121)||(48444147-48444249)
chr7 (24-113)||(25872802-25872891)
chr7 (24-121)||(43170939-43171036)
chr7 (31-121)||(43203337-43203427)
chr7 (19-119)||(10220468-10220567)
chr7 (29-121)||(15634884-15634976)
chr7 (34-78)||(34763516-34763560)
chr7 (29-121)||(38033760-38033852)
chr7 (22-78)||(40657603-40657659)
chr7 (31-122)||(49078899-49078988)
chr7 (19-74)||(19630663-19630718)
chr7 (18-112)||(23036199-23036291)
chr7 (31-121)||(25049965-25050055)
chr7 (24-120)||(35309886-35309982)
chr7 (19-107)||(35577871-35577959)
chr7 (24-75)||(31288224-31288275)
chr7 (30-112)||(7298131-7298213)
chr7 (19-75)||(5462945-5463001)
chr7 (51-119)||(29255750-29255817)
[»] chr5 (27 HSPs)
chr5 (19-121)||(13203988-13204090)
chr5 (19-121)||(4824934-4825036)
chr5 (19-120)||(31909380-31909481)
chr5 (19-119)||(21018256-21018356)
chr5 (19-121)||(2971015-2971117)
chr5 (29-122)||(1191545-1191638)
chr5 (19-120)||(8734028-8734130)
chr5 (19-121)||(12257387-12257489)
chr5 (19-121)||(35317692-35317794)
chr5 (19-119)||(11124685-11124785)
chr5 (33-121)||(27721462-27721550)
chr5 (29-119)||(6021025-6021115)
chr5 (19-120)||(28591345-28591446)
chr5 (24-121)||(29265906-29266003)
chr5 (19-121)||(21112080-21112182)
chr5 (29-121)||(40177655-40177747)
chr5 (49-120)||(9576986-9577057)
chr5 (19-78)||(32143409-32143468)
chr5 (19-121)||(23262579-23262677)
chr5 (29-121)||(17984747-17984839)
chr5 (18-121)||(35545964-35546067)
chr5 (33-121)||(3386902-3386997)
chr5 (19-59)||(17465170-17465210)
chr5 (23-78)||(2786345-2786399)
chr5 (19-74)||(19181789-19181843)
chr5 (19-65)||(4925673-4925719)
chr5 (19-107)||(14270569-14270657)
[»] chr8 (38 HSPs)
chr8 (19-121)||(1078643-1078745)
chr8 (19-121)||(6602513-6602615)
chr8 (19-121)||(6677966-6678068)
chr8 (19-121)||(32333145-32333247)
chr8 (19-119)||(1335-1435)
chr8 (19-119)||(35779492-35779592)
chr8 (19-121)||(70518-70620)
chr8 (31-121)||(5385369-5385459)
chr8 (19-121)||(28817287-28817389)
chr8 (19-121)||(42885205-42885307)
chr8 (19-121)||(4530977-4531079)
chr8 (19-121)||(31532120-31532222)
chr8 (19-121)||(42192634-42192736)
chr8 (29-120)||(7813354-7813445)
chr8 (19-121)||(12534715-12534815)
chr8 (19-121)||(39303340-39303443)
chr8 (19-121)||(3822427-3822529)
chr8 (19-121)||(45264635-45264736)
chr8 (19-119)||(39435315-39435415)
chr8 (29-121)||(40911252-40911343)
chr8 (19-121)||(10963237-10963337)
chr8 (19-121)||(7792692-7792794)
chr8 (19-121)||(13891121-13891223)
chr8 (21-121)||(31969717-31969817)
chr8 (19-121)||(6099603-6099705)
chr8 (19-121)||(9292049-9292151)
chr8 (19-116)||(9775037-9775134)
chr8 (19-111)||(33731459-33731551)
chr8 (20-65)||(29425438-29425483)
chr8 (19-113)||(2907054-2907147)
chr8 (29-121)||(41849237-41849328)
chr8 (19-121)||(18752372-18752474)
chr8 (19-78)||(31695264-31695323)
chr8 (54-120)||(18386740-18386806)
chr8 (29-119)||(7403700-7403789)
chr8 (19-120)||(14400747-14400848)
chr8 (49-121)||(41753005-41753077)
chr8 (22-74)||(42364700-42364752)
[»] chr4 (49 HSPs)
chr4 (19-121)||(22608016-22608118)
chr4 (19-121)||(28798383-28798485)
chr4 (19-121)||(29581039-29581140)
chr4 (19-121)||(43139901-43140003)
chr4 (19-121)||(1173982-1174084)
chr4 (19-121)||(34739311-34739413)
chr4 (19-119)||(45874088-45874188)
chr4 (19-121)||(53457855-53457957)
chr4 (19-121)||(54768427-54768529)
chr4 (19-119)||(12735464-12735564)
chr4 (29-121)||(23710338-23710430)
chr4 (19-119)||(55214685-55214785)
chr4 (19-121)||(18257360-18257462)
chr4 (19-121)||(19849498-19849600)
chr4 (19-121)||(26424853-26424954)
chr4 (19-120)||(19673924-19674025)
chr4 (19-119)||(23417478-23417578)
chr4 (19-120)||(19814137-19814238)
chr4 (33-121)||(39807875-39807963)
chr4 (30-121)||(238464-238555)
chr4 (19-121)||(12867872-12867974)
chr4 (19-121)||(19225290-19225392)
chr4 (19-121)||(11278013-11278111)
chr4 (19-120)||(24417873-24417974)
chr4 (19-119)||(2864743-2864843)
chr4 (19-78)||(1966624-1966683)
chr4 (24-121)||(55400259-55400356)
chr4 (19-119)||(2075538-2075638)
chr4 (19-77)||(31015057-31015115)
chr4 (36-121)||(22910269-22910354)
chr4 (36-121)||(22968168-22968253)
chr4 (19-120)||(24517978-24518079)
chr4 (34-119)||(52172000-52172085)
chr4 (19-91)||(33770629-33770701)
chr4 (29-119)||(516461-516551)
chr4 (34-120)||(37134080-37134166)
chr4 (39-121)||(49030754-49030835)
chr4 (19-65)||(50347324-50347370)
chr4 (31-119)||(2804555-2804641)
chr4 (30-91)||(37620678-37620739)
chr4 (19-120)||(52768296-52768396)
chr4 (62-121)||(3465783-3465842)
chr4 (19-74)||(23532125-23532180)
chr4 (37-119)||(32778158-32778238)
chr4 (19-106)||(50033428-50033515)
chr4 (19-77)||(51287676-51287735)
chr4 (67-121)||(32441127-32441181)
chr4 (37-78)||(41001535-41001576)
chr4 (31-75)||(48822890-48822934)
[»] chr2 (38 HSPs)
chr2 (19-121)||(33083549-33083651)
chr2 (19-121)||(10639601-10639703)
chr2 (19-121)||(34460400-34460502)
chr2 (19-121)||(37197605-37197707)
chr2 (19-121)||(39535529-39535631)
chr2 (19-119)||(29659213-29659313)
chr2 (19-121)||(26605655-26605757)
chr2 (29-121)||(11708709-11708801)
chr2 (19-119)||(23839892-23839992)
chr2 (19-121)||(11459746-11459848)
chr2 (19-121)||(19048785-19048887)
chr2 (19-121)||(19537338-19537440)
chr2 (19-121)||(38440192-38440294)
chr2 (19-121)||(39831439-39831540)
chr2 (30-121)||(4851351-4851442)
chr2 (19-121)||(11816545-11816648)
chr2 (19-121)||(7275881-7275983)
chr2 (19-91)||(33001763-33001835)
chr2 (33-121)||(40786218-40786306)
chr2 (23-121)||(43778467-43778565)
chr2 (19-121)||(45125160-45125262)
chr2 (19-112)||(27137913-27138006)
chr2 (29-121)||(4800907-4800999)
chr2 (29-117)||(7349133-7349221)
chr2 (19-121)||(42025701-42025804)
chr2 (19-121)||(19816251-19816353)
chr2 (19-77)||(42578243-42578301)
chr2 (19-121)||(43684100-43684202)
chr2 (29-121)||(15782621-15782712)
chr2 (29-121)||(16654394-16654486)
chr2 (81-120)||(25501840-25501879)
chr2 (49-121)||(33564934-33565004)
chr2 (52-121)||(38400500-38400569)
chr2 (19-75)||(44181882-44181938)
chr2 (19-121)||(34239815-34239917)
chr2 (19-104)||(20497585-20497670)
chr2 (20-112)||(34093277-34093370)
chr2 (18-121)||(34234561-34234662)
[»] chr1 (37 HSPs)
chr1 (19-121)||(5055783-5055885)
chr1 (30-121)||(41761417-41761508)
chr1 (19-121)||(5943712-5943814)
chr1 (19-121)||(28455905-28456007)
chr1 (19-121)||(32007105-32007207)
chr1 (31-121)||(39276381-39276471)
chr1 (19-121)||(41808233-41808335)
chr1 (19-121)||(45813006-45813108)
chr1 (19-121)||(48660053-48660155)
chr1 (19-119)||(192448-192548)
chr1 (19-119)||(13109803-13109903)
chr1 (19-121)||(29994378-29994480)
chr1 (24-121)||(20779-20876)
chr1 (19-121)||(46447368-46447474)
chr1 (29-117)||(50106201-50106289)
chr1 (22-119)||(7059500-7059597)
chr1 (19-107)||(26032846-26032934)
chr1 (24-118)||(778608-778702)
chr1 (19-117)||(13097339-13097437)
chr1 (23-105)||(35110098-35110180)
chr1 (19-96)||(41039298-41039375)
chr1 (29-121)||(35945828-35945920)
chr1 (30-121)||(11688294-11688385)
chr1 (18-121)||(21938973-21939076)
chr1 (51-115)||(35224377-35224439)
chr1 (29-120)||(39284322-39284413)
chr1 (60-121)||(29587283-29587344)
chr1 (24-121)||(49783738-49783835)
chr1 (29-121)||(2088910-2089002)
chr1 (19-74)||(25931152-25931207)
chr1 (19-121)||(7275712-7275814)
chr1 (19-78)||(3716436-3716495)
chr1 (19-78)||(9886887-9886946)
chr1 (19-106)||(26264531-26264618)
chr1 (29-119)||(13183181-13183271)
chr1 (67-121)||(47111488-47111542)
chr1 (24-121)||(4065992-4066089)
[»] scaffold1348 (1 HSPs)
scaffold1348 (19-121)||(857-959)
[»] chr6 (22 HSPs)
chr6 (19-121)||(33621525-33621627)
chr6 (31-121)||(33704247-33704337)
chr6 (19-121)||(2959180-2959282)
chr6 (19-121)||(4464158-4464260)
chr6 (19-121)||(21000723-21000825)
chr6 (19-120)||(19145503-19145603)
chr6 (19-119)||(361044-361144)
chr6 (17-119)||(24619072-24619174)
chr6 (19-121)||(28322963-28323065)
chr6 (19-119)||(16518456-16518554)
chr6 (19-120)||(21037323-21037423)
chr6 (54-120)||(11572040-11572106)
chr6 (19-101)||(22576232-22576314)
chr6 (19-112)||(29009645-29009738)
chr6 (19-78)||(35218635-35218694)
chr6 (19-121)||(10999403-10999505)
chr6 (31-121)||(7613334-7613425)
chr6 (18-117)||(12252058-12252157)
chr6 (31-77)||(9454732-9454778)
chr6 (19-84)||(28592123-28592188)
chr6 (31-121)||(584791-584880)
chr6 (67-111)||(33688207-33688251)
[»] chr3 (35 HSPs)
chr3 (19-121)||(7824449-7824551)
chr3 (24-121)||(29689482-29689579)
chr3 (30-119)||(55018040-55018129)
chr3 (19-121)||(4601456-4601558)
chr3 (19-121)||(54151676-54151778)
chr3 (24-121)||(54158297-54158394)
chr3 (29-121)||(9349681-9349773)
chr3 (19-119)||(43247645-43247745)
chr3 (19-121)||(3112990-3113092)
chr3 (19-121)||(36228989-36229091)
chr3 (19-121)||(51665920-51666022)
chr3 (29-121)||(38257308-38257400)
chr3 (19-121)||(28844535-28844638)
chr3 (19-121)||(42392800-42392902)
chr3 (20-118)||(47635001-47635099)
chr3 (19-121)||(33334639-33334741)
chr3 (19-121)||(52500869-52500971)
chr3 (19-120)||(8151380-8151481)
chr3 (18-121)||(35461473-35461576)
chr3 (33-119)||(448884-448970)
chr3 (19-121)||(1778882-1778984)
chr3 (19-120)||(475276-475376)
chr3 (19-119)||(41377617-41377712)
chr3 (29-100)||(7958621-7958692)
chr3 (19-78)||(55320395-55320454)
chr3 (19-121)||(32001419-32001521)
chr3 (24-121)||(29750652-29750748)
chr3 (19-75)||(43775300-43775356)
chr3 (19-74)||(27230744-27230799)
chr3 (19-61)||(2590805-2590847)
chr3 (19-121)||(28458694-28458795)
chr3 (19-89)||(40756722-40756792)
chr3 (19-78)||(50729598-50729657)
chr3 (19-78)||(50783192-50783251)
chr3 (29-77)||(53182808-53182856)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-121)||(22194-22295)
[»] scaffold0119 (2 HSPs)
scaffold0119 (19-121)||(13946-14048)
scaffold0119 (19-121)||(19626-19728)
[»] scaffold0044 (1 HSPs)
scaffold0044 (19-121)||(9968-10070)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-121)||(56512-56614)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-121)||(114283-114385)
[»] scaffold0067 (1 HSPs)
scaffold0067 (19-121)||(34849-34952)
[»] scaffold0352 (1 HSPs)
scaffold0352 (19-121)||(8938-9040)
[»] scaffold0360 (2 HSPs)
scaffold0360 (69-121)||(14526-14578)
scaffold0360 (29-65)||(14592-14628)
[»] scaffold0178 (1 HSPs)
scaffold0178 (31-75)||(15141-15185)


Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 365
Target Start/End: Original strand, 39513978 - 39514324
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||||    
T  39513978 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaatt 39514077  T
Q  119 tcgtgcatgacatgttagggccttcgtttctacttaacttacccccacaattttataatatcccaaacactgtttagtgcttcttattttttcttcgaat 218  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39514078 tcgtccatgacatgatagggccttcgtttctacttaacttacccccacaattttataatatcccaaacactgtttagtgcttcttattttttcttggaat 39514177  T
Q  219 tcccacaccccacattcttcaccataaatatacatttctcttttaataattatatactgttaatgcagtgaaaatatatggtctaggccaagtttgctgt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39514178 tcccacaccccacattcttcaccataaatatacatttctcttttaataattatagactgttaatgcagtgaaaatatatggtctaggccaagtttgctgt 39514277  T
Q  319 ggggaaactatataggcatgtattgaagaacctacatcctttcttct 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39514278 ggggaaactatataggcatgtattgaagaacctacatcctttcttct 39514324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 2146769 - 2146667
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| ||||| |||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  2146769 ttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatt 2146670  T
Q  119 tcg 121  Q
    |||    
T  2146669 tcg 2146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 4106871 - 4106769
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  4106871 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 4106772  T
Q  119 tcg 121  Q
    |||    
T  4106771 tcg 4106769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 4107442 - 4107340
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||  |||||||||||||||||||    
T  4107442 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatt 4107343  T
Q  119 tcg 121  Q
    |||    
T  4107342 tcg 4107340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 23358318 - 23358216
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  23358318 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatt 23358219  T
Q  119 tcg 121  Q
    |||    
T  23358218 tcg 23358216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 31770527 - 31770629
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| ||| |||||||||||||||    
T  31770527 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatt 31770626  T
Q  119 tcg 121  Q
    |||    
T  31770627 tcg 31770629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 25546270 - 25546372
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||  || |||||||| |||||| |||||||||||||||||||    
T  25546270 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatt 25546369  T
Q  119 tcg 121  Q
    |||    
T  25546370 tcg 25546372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 32606325 - 32606427
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| ||||| | |||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  32606325 tttttgtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatt 32606424  T
Q  119 tcg 121  Q
    |||    
T  32606425 tcg 32606427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 44084063 - 44083973
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| |||||||||||||||||||    
T  44084063 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattt 44083973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 47570713 - 47570815
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||| |||||| |||||||||||||||||||    
T  47570713 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatt 47570812  T
Q  119 tcg 121  Q
    |||    
T  47570813 tcg 47570815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 41183943 - 41183846
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| |||||||||| |||||||| |||| ||||||||||||||||||||||||  ||||||||||||  ||||| ||||||||||||||||||||||    
T  41183943 gtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcg 41183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 8439211 - 8439111
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||| ||||||| |||||||||||| |||||||||| | ||||||| ||||||| ||||||||||    
T  8439211 tttttgtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaatt 8439112  T
Q  119 t 119  Q
    |    
T  8439111 t 8439111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 40058371 - 40058271
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||| ||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  40058371 ttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 40058272  T
Q  119 t 119  Q
    |    
T  40058271 t 40058271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 27229484 - 27229575
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||||||  |||||||||||  ||||||||||||||||||||||||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcg 27229575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 5587413 - 5587311
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||| || |||||| |||||| |||||||||    
T  5587413 ttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatt 5587314  T
Q  119 tcg 121  Q
    |||    
T  5587313 tcg 5587311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 5592374 - 5592272
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||| || |||||| |||||| |||||||||    
T  5592374 ttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatt 5592275  T
Q  119 tcg 121  Q
    |||    
T  5592274 tcg 5592272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 38781203 - 38781304
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||| | |||||||||| | |||||||||||||    
T  38781203 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgcaatt 38781302  T
Q  119 tc 120  Q
    ||    
T  38781303 tc 38781304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 43753748 - 43753851
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||| ||| ||||||||||||||||||| ||||||||| |||||| | |||||||||||   |||||||||||  ||||||||||||||||||||||||    
T  43753748 tttttatcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaat 43753847  T
Q  118 ttcg 121  Q
    ||||    
T  43753848 ttcg 43753851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 25112242 - 25112344
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| ||||| |||||| ||||||||||||  |||||||||||  ||||| |||||||| ||||||||||    
T  25112242 ttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatt 25112341  T
Q  119 tcg 121  Q
    |||    
T  25112342 tcg 25112344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 7162785 - 7162885
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||  || |||||||||  | ||||||||| ||||||| |||||||||||| |||||    
T  7162785 tttttgtcttagatgaagtggtaatccactgaaaataaactcacac--aattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatt 7162882  T
Q  119 tcg 121  Q
    |||    
T  7162883 tcg 7162885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28603144 - 28603042
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| || |||||||||||| | || ||||| |||  ||||||||||   ||||||||||||||||||||| |||    
T  28603144 tttttgtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgcgatt 28603045  T
Q  119 tcg 121  Q
    |||    
T  28603044 tcg 28603042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 47250246 - 47250348
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||  ||| ||   |||||||||| |||||| |||||||||||||||||||    
T  47250246 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatt 47250345  T
Q  119 tcg 121  Q
    |||    
T  47250346 tcg 47250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 47557914 - 47557812
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||| | |||||||||||   ||||||||||| |||||| ||||| || ||||| ||||    
T  47557914 tttttgtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatt 47557815  T
Q  119 tcg 121  Q
    |||    
T  47557814 tcg 47557812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 48146886 - 48146785
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||  |||| | |||||||||| ||||||||||||  ||||||||||| |||||||||| || | ||||||||||    
T  48146886 ttttggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatt 48146787  T
Q  119 tc 120  Q
    ||    
T  48146786 tc 48146785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 4001839 - 4001939
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||  | ||| ||||||  | ||||||||| |||||||||| |||||||||||||||    
T  4001839 tttttgtcttagatgaagtggtaaaccattgaaattaaactcacac--agctgagaggtcccgagttcgaacccgggtcacgacatccggccttgcaatt 4001936  T
Q  119 tcg 121  Q
    |||    
T  4001937 tcg 4001939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 11355952 - 11355854
Alignment:
Q  23 tgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||  ||||||||| |  | |||  ||||||| |||||||||||||    
T  11355952 tgtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttcg 11355854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 29484750 - 29484852
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| | |||||||| |||||||| ||||||||||||||| | || |||||||||  |||||| ||||  | ||| |||||||||||||||||||    
T  29484750 tttttgtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatt 29484849  T
Q  119 tcg 121  Q
    |||    
T  29484850 tcg 29484852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 13887282 - 13887202
Alignment:
Q  39 gtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| ||||||||||||| |||  ||||||||||   |||||||||||||||||||||||||||| ||||||| ||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcg 13887202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 5772826 - 5772916
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||| |||| ||||||||||||||||| |||||||||||   | ||||||||| |||||||   ||||| |||||||||||||    
T  5772826 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcg 5772916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 27915575 - 27915677
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaac-ctgggtcacgacgtccggccttgcaat 117  Q
    |||| |||| ||||||||||||||| ||  ||||||||||||| ||| ||||||||| || | ||||||||| |  |||||||||||||| |||||||||    
T  27915575 ttttggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaat 27915674  T
Q  118 ttc 120  Q
    |||    
T  27915675 ttc 27915677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 48444147 - 48444249
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||| ||   |||||||||||  | ||||||||||| | ||| |||||    
T  48444147 tttttgtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttacaatt 48444246  T
Q  119 tcg 121  Q
    |||    
T  48444247 tcg 48444249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 25872891 - 25872802
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttg 113  Q
    |||| ||||||||||||||  ||| |||| |||||||| ||| || ||| ||||||| ||||||||||||| |||||||||||| |||||    
T  25872891 gtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttg 25872802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 43170939 - 43171036
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| |||||| |||||||||||  ||||||||||||||| | ||||| || |||   | || |||||||||| ||||||||||||||||||||||||    
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttcg 43171036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 43203427 - 43203337
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||  ||||||| | || |||||||||||| |||||| |||||  ||||||||||| |||||||| ||||| ||||| ||||||||    
T  43203427 atgaagtgaaaatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttacaatttcg 43203337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 10220468 - 10220567
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||| |||||| |||| ||||||||||||||||| |||||||||||   || ||||||||  | ||| ||||||| ||||| |||||    
T  10220468 tttttgtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaacccagatcatgacgtcctgccttacaatt 10220566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 15634884 - 15634976
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||||| || |||| |||||||||||| |||||||| ||   || |||||| | ||||||||||||||| | || ||||||||    
T  15634884 agatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgactttacaatttcg 15634976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 34763560 - 34763516
Alignment:
Q  34 aagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtc 34763516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 38033852 - 38033760
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||| ||||| |||| |||||||||||| ||||||||||||  || || ||||| || |||| | ||||| |||| ||||||||    
T  38033852 agatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcg 38033760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 40657659 - 40657603
Alignment:
Q  22 ttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    |||||| |||||||||| |||||||| |||||||||||| ||||||||| |||||||    
T  40657659 ttgtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtc 40657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 49078899 - 49078988
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcgt 122  Q
    |||||||||||| | || || |||||| |||||||  ||||||||||||||| |||||||  || |||||||||||| |||| |||||||||    
T  49078899 atgaagtggtaaactactgatattaaattcacaca--actgtgaggtcatggattcgaactcggatcacgacgtccgaccttacaatttcgt 49078988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 19630663 - 19630718
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||    
T  19630663 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 23036199 - 23036291
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcctt 112  Q
    |||||||| | ||||||||||||||||||  |||||||||||  ||||||||||||||||  || ||||||| ||| ||||  ||||||| ||||    
T  23036199 atttttgttttagatgaagtggtaatccattgaaattaaact--cacataactgtgaggttctgagttcgaatctgagtcataacgtccgacctt 23036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 25049965 - 25050055
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||| |||||||||||  |||||||||||||| | ||||||||| ||||| |||| || |  |||||||||||| | |||| ||||||||    
T  25049965 atgaaatggtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttcg 25050055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 35309982 - 35309886
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    |||| |||||||||| ||| |||| |||||||||||| |||| || |||||| ||  || |||||| |  ||||| ||||||||||||| |||||||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaatttc 35309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 35577871 - 35577959
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccg 107  Q
    ||||||||| ||||||| | ||||||||  ||||||||||| ||||| || ||||| |||  ||||||||||  |||||||||| ||||    
T  35577871 tttttgtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtcacgacatccg 35577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 31288224 - 31288275
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    |||| |||||||||||||| |||| ||||||||||| ||||| |||||||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgag 31288275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 112
Target Start/End: Original strand, 7298131 - 7298213
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcctt 112  Q
    |||||||| |||||| ||  ||||||||||| || |||| |||||||||   |||||||| |||||||||||| |||| ||||    
T  7298131 gatgaagtagtaatctactaaaattaaactctcatataattgtgaggtctcaggttcgaatctgggtcacgacatccgacctt 7298213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 5462945 - 5463001
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    |||| |||| ||||||||||||  ||||  ||||||||||||||||| |||||||||    
T  5462945 ttttggtctaagatgaagtggttctccattgaaattaaactcacacacaactgtgag 5463001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 29255817 - 29255750
Alignment:
Q  51 aattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||| || |||||| || || |||||||||||| || |||||||||||  |||||||||||    
T  29255817 aattaaactcacgca-aactgtaagatcctgggttcgaacccggatcacgacgtccaaccttgcaattt 29255750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 13204090 - 13203988
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  13204090 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 13203991  T
Q  119 tcg 121  Q
    |||    
T  13203990 tcg 13203988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 4824934 - 4825036
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||  |||| |||||||||||| ||||||||||||  ||||| ||||||||||||| ||||||||||||||||||    
T  4824934 ttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatt 4825033  T
Q  119 tcg 121  Q
    |||    
T  4825034 tcg 4825036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 31909380 - 31909481
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||| ||||||||||||    
T  31909380 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgcaatt 31909479  T
Q  119 tc 120  Q
    ||    
T  31909480 tc 31909481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 21018356 - 21018256
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||| ||||||    
T  21018356 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaatt 21018257  T
Q  119 t 119  Q
    |    
T  21018256 t 21018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 2971117 - 2971015
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||   |||||||||| ||||||| ||||| | |||| |||||    
T  2971117 tttttgtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatt 2971018  T
Q  119 tcg 121  Q
    |||    
T  2971017 tcg 2971015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 1191545 - 1191638
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcgt 122  Q
    ||||||||| |||| |||| ||||||||||||||||| || |||||||||  ||||||||||| || |||||||||||||||||||||||||||    
T  1191545 agatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgt 1191638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 8734130 - 8734028
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||||||| ||||||||||||||||||| ||| ||||| |||||  | |||||||||||   |||||||||||| ||||||||||||||||||||||||    
T  8734130 tttttgtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaat 8734031  T
Q  118 ttc 120  Q
    |||    
T  8734030 ttc 8734028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 12257489 - 12257387
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| || | ||||||| ||||||||||||  |||||| ||||| |||||| |||||    
T  12257489 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttacaatt 12257390  T
Q  119 tcg 121  Q
    |||    
T  12257389 tcg 12257387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 35317692 - 35317794
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||||| ||  |||||  ||||||| ||||||||||    
T  35317692 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatt 35317791  T
Q  119 tcg 121  Q
    |||    
T  35317792 tcg 35317794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 11124785 - 11124685
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||||||  ||||||||| |||| | || | ||||||  |||||||||| |  |||||||||||||||||||||||||    
T  11124785 tttttgtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgcaatt 11124686  T
Q  119 t 119  Q
    |    
T  11124685 t 11124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 27721550 - 27721462
Alignment:
Q  33 gaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||| ||||||||| ||||| | ||||||||||||  |||||| |||| ||||||||||||||| | |||||||||||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcg 27721462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 6021115 - 6021025
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||| |||||||||||||| |||| |||||||||||| ||||| ||||||  ||||||||| | ||||||| ||||| |||||||||||||    
T  6021115 agataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattt 6021025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 28591345 - 28591446
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| || |||||||||| ||| |||||||||||    |||| ||||| | ||||| ||||||||||||||||||    
T  28591345 tttttgtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaatt 28591444  T
Q  119 tc 120  Q
    ||    
T  28591445 tc 28591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 29266003 - 29265906
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||| | ||||||| || | || ||||| |||||||    
T  29266003 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttcg 29265906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 21112182 - 21112080
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||| |||||||||||| |||| |||||||| ||| |||| |||||||   ||||||||||| |||||||||||  | ||||||||||    
T  21112182 ttttggtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatt 21112083  T
Q  119 tcg 121  Q
    |||    
T  21112082 tcg 21112080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 40177747 - 40177655
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||| |||||||||||| ||| |||| ||   ||||| ||| |  |||||| |||||||||||||||||||||    
T  40177747 agatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcg 40177655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 9576986 - 9577057
Alignment:
Q  49 gaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    ||||||||||||||| | |||||||||||  ||||||||||||  ||||| |||||| ||||||||||||||    
T  9576986 gaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttc 9577057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 32143409 - 32143468
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  32143409 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 32143468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 23262677 - 23262579
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||| ||||  | |||||||||    ||||| || ||| |||||||||||    
T  23262677 ttttagtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac----gtcacaacatccagccttgcaatt 23262582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 17984747 - 17984839
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||| ||| ||||  |||||||||||||||| |||||||||||   ||||||||||| | |||| |||||||   ||||||||||||    
T  17984747 agatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccgagtcaggacgtccaatcttgcaatttcg 17984839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 35546067 - 35545964
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||||||||| |||||||||| ||||||||  ||||||||| |||| | ||||||||||||   ||||||||   || ||||||||| |||  |||||||    
T  35546067 atttttgtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaat 35545968  T
Q  118 ttcg 121  Q
    ||||    
T  35545967 ttcg 35545964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 3386902 - 3386997
Alignment:
Q  33 gaagtggtaatccaccgaaattaaactcacacataactgtgaggt-----cat--gggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||| ||||||||| ||||||| |||| ||||||     | |  ||||||||||| || | ||||||||||||||||||||||||    
T  3386902 gaagtggtaatccactgaaattaaattcacacacaactttgaggttccgacttccgggttcgaacccggataacgacgtccggccttgcaatttcg 3386997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 17465210 - 17465170
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaact 59  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  17465210 tttttgtcttagatgaagtggtaatccactgaaattaaact 17465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 2786399 - 2786345
Alignment:
Q  23 tgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||| ||||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  2786399 tgtcttagatgaagtggtaatccactg-aattaaactcatacacaactgtgaggtc 2786345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 19181843 - 19181789
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    ||||||||| | |||||||| |||||||| ||||||||||||||||| ||||||||    
T  19181843 tttttgtcttaaatgaagtg-taatccactgaaattaaactcacacacaactgtga 19181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 4925719 - 4925673
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacaca 65  Q
    ||||||||| |||||||||||||| |||| ||||||||||| |||||    
T  4925719 tttttgtcttagatgaagtggtaaaccactgaaattaaacttacaca 4925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 14270657 - 14270569
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccg 107  Q
    ||||||||| |||||||||| |||||||| |||| |||||| | ||| |||| |||| ||  ||||| |||   |||||||||||||||    
T  14270657 tttttgtcttagatgaagtgataatccactgaaaataaacttaaacacaactatgagatctcgggttggaatacgggtcacgacgtccg 14270569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 1078643 - 1078745
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  1078643 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatt 1078742  T
Q  119 tcg 121  Q
    |||    
T  1078743 tcg 1078745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 6602513 - 6602615
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  6602513 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 6602612  T
Q  119 tcg 121  Q
    |||    
T  6602613 tcg 6602615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 6677966 - 6678068
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  6677966 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 6678065  T
Q  119 tcg 121  Q
    |||    
T  6678066 tcg 6678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 32333247 - 32333145
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  32333247 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 32333148  T
Q  119 tcg 121  Q
    |||    
T  32333147 tcg 32333145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 1335 - 1435
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  1335 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaatt 1434  T
Q  119 t 119  Q
    |    
T  1435 t 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 35779492 - 35779592
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  35779492 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 35779591  T
Q  119 t 119  Q
    |    
T  35779592 t 35779592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 70518 - 70620
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||| |||| |||||| |||||||| ||||||||||    
T  70518 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatt 70617  T
Q  119 tcg 121  Q
    |||    
T  70618 tcg 70620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 5385459 - 5385369
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||  ||| ||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  5385459 atgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttcg 5385369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28817389 - 28817287
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||    
T  28817389 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatt 28817290  T
Q  119 tcg 121  Q
    |||    
T  28817289 tcg 28817287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 42885307 - 42885205
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||| |||||| |||||||||||||||||||    
T  42885307 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatt 42885208  T
Q  119 tcg 121  Q
    |||    
T  42885207 tcg 42885205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 4530977 - 4531079
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| | ||||||||||  ||||||||||| |||||| ||||||| |||||||||||    
T  4530977 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatt 4531076  T
Q  119 tcg 121  Q
    |||    
T  4531077 tcg 4531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 31532120 - 31532222
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||   ||||| || | ||||||| ||||||||||||||||||    
T  31532120 tttttgttttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatt 31532219  T
Q  119 tcg 121  Q
    |||    
T  31532220 tcg 31532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 42192634 - 42192736
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||  |||||| |||||||||||||||||||    
T  42192634 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatt 42192733  T
Q  119 tcg 121  Q
    |||    
T  42192734 tcg 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 7813445 - 7813354
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| | ||||| || |||||||||||||||||    
T  7813445 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgcaatttc 7813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 12534715 - 12534815
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||| || |||| ||||||||| ||  |||||||| || |||||||||||| || |||||||||||||||||||||||    
T  12534715 tttttgtcttagatgaagtggtaatctactgaaaataaactcacgca--actgtgagatcctgggttcgaacccggatcacgacgtccggccttgcaatt 12534812  T
Q  119 tcg 121  Q
    |||    
T  12534813 tcg 12534815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 39303443 - 39303340
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||||||  |||||| ||||   |||| ||||||||||||||||||    
T  39303443 tttttgtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaat 39303344  T
Q  118 ttcg 121  Q
    ||||    
T  39303343 ttcg 39303340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 3822529 - 3822427
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||| ||||||||||| |||  |||||||||||||||| ||||||||| || |||||||||||| ||||||| ||||||| |||| |||||    
T  3822529 tttttgtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttacaatt 3822430  T
Q  119 tcg 121  Q
    |||    
T  3822429 tcg 3822427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 45264635 - 45264736
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||| | |||||||||| || || |||||||    
T  45264635 tttttgtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacc-tgcaatt 45264733  T
Q  119 tcg 121  Q
    |||    
T  45264734 tcg 45264736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 39435415 - 39435315
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||| |||||||||  |||||||||||||||| ||||||||||||  |||||||||||  | ||| |||||||| ||||||||||    
T  39435415 tttttgtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgcaatt 39435316  T
Q  119 t 119  Q
    |    
T  39435315 t 39435315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 40911343 - 40911252
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||| |||| ||||||||||||||||| |  |||||||||  || |||||||| |||||||||||||||||||||||||||||    
T  40911343 agatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtcccgg-ttcgaacccgggtcacgacgtccggccttgcaatttcg 40911252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 10963237 - 10963337
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| ||||||||||||  |||||||||||  |||||||||||||| |||| |||| |||||||| ||||    
T  10963237 ttttggtcttagatgaagtggtaatccactgaaaataaactcacaca--actgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatt 10963334  T
Q  119 tcg 121  Q
    |||    
T  10963335 tcg 10963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 7792794 - 7792692
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||| ||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||| | ||||| |||||| |||||||||||    
T  7792794 ttttggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatt 7792695  T
Q  119 tcg 121  Q
    |||    
T  7792694 tcg 7792692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 13891223 - 13891121
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||| |||||||||||| | |||||||||| | ||||||  ||  ||||||||| ||    
T  13891223 tttttgtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccgagtcacggtgtttggccttgcactt 13891124  T
Q  119 tcg 121  Q
    |||    
T  13891123 tcg 13891121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 31969717 - 31969817
Alignment:
Q  21 tttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    ||||||| |||||||||||||| |||| ||||||||| ||||||| |||| |||||||  | ||||||||| || ||| |||||| ||||||| ||||||    
T  31969717 tttgtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttc 31969816  T
Q  121 g 121  Q
    |    
T  31969817 g 31969817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 6099705 - 6099603
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| ||||  ||| ||||||||| |  || ||||||||   ||||||||||  |||||| |||||||||||||||||||    
T  6099705 tttttgtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgcaatt 6099606  T
Q  119 tcg 121  Q
    |||    
T  6099605 tcg 6099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 9292151 - 9292049
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||| ||| ||||||||||||||||||| |||| |||||||||||| |||||||| |||  | |||||||   ||||||| ||||||||| || |||||    
T  9292151 tttttttcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatt 9292052  T
Q  119 tcg 121  Q
    |||    
T  9292051 tcg 9292049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 9775037 - 9775134
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaa 116  Q
    ||||||||| ||||||||| ||||||||   ||||||||||||||||||||||||||||   |||||||||||  | ||||||  | |||||||||||    
T  9775037 tttttgtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaacccagatcacgattttcggccttgcaa 9775134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 33731459 - 33731551
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcct 111  Q
    ||||||||| ||| |||||||||| ||||  |||||||||||||||| ||||| ||||||  | ||| ||||| ||||||||||||| |||||    
T  33731459 tttttgtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtcacgacgtctggcct 33731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29425483 - 29425438
Alignment:
Q  20 ttttgtctcagatgaagtggtaatccaccgaaattaaactcacaca 65  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||    
T  29425483 ttttgtcttagatgaagtggtaatccactgaaattaaactcacaca 29425438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 2907147 - 2907054
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccacc-gaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttg 113  Q
    ||||||||| ||| |||||||||||||||  |||||||||||| ||  |||||||||||||  |||||| |||| || |||||||||||| |||||    
T  2907147 tttttgtcttagacgaagtggtaatccacttgaaattaaactccca--taactgtgaggtcccgggttcaaacccggatcacgacgtccgaccttg 2907054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 41849237 - 41849328
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||| |||||||| || ||||||||||||||||| ||| |||||||   || ||||||||  | |||||||||||| |||||||||||||    
T  41849237 agatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttcg 41849328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 18752474 - 18752372
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||| ||| | ||||||||  ||||||| |||||||||| |||||| |||||| ||||   |||||||||||  | |||||||||||| |||| |||||    
T  18752474 tttttttcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatt 18752375  T
Q  119 tcg 121  Q
    |||    
T  18752374 tcg 18752372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 31695264 - 31695323
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| |||||||||||||| |||  ||||||||||||||||| || |||||||||    
T  31695264 tttttgtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtc 31695323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 18386806 - 18386740
Alignment:
Q  54 taaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    |||||||||||| ||||||||||||  ||||||||||| | |||| ||| |||| ||||||||||||    
T  18386806 taaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttc 18386740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 7403700 - 7403789
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||||||| || |||||||| |||||| | |||||||| |||  || |||||||  | ||||||||||||| |||| ||||||    
T  7403700 agatgaagtggtaatc-actgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaattt 7403789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 14400848 - 14400747
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| ||||   |||||||||||| || || |||||||||  |||||| || |  | | |||||||||| || |||||||    
T  14400848 tttttgtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttcaaatccagtttacgacgtccgaccgtgcaatt 14400749  T
Q  119 tc 120  Q
    ||    
T  14400748 tc 14400747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 41753005 - 41753077
Alignment:
Q  49 gaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||| ||||| ||||||||| |  ||||||||||   || ||||||| ||||| ||||||||||||    
T  41753005 gaaattaaacttacacacaactgtgagattttgggttcgaattcggatcacgacatccggtcttgcaatttcg 41753077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 42364700 - 42364752
Alignment:
Q  22 ttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    |||||| |||| ||||||||| | || ||||||||||||||||| ||||||||    
T  42364700 ttgtcttagataaagtggtaaactactgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 22608118 - 22608016
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||||||||||||| ||||||||  ||||||||||||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  22608118 tttttgtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 22608019  T
Q  119 tcg 121  Q
    |||    
T  22608018 tcg 22608016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 28798383 - 28798485
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| |||||| |||||  ||||||||||| ||||||||||||||||||||||||||    
T  28798383 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 28798482  T
Q  119 tcg 121  Q
    |||    
T  28798483 tcg 28798485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 29581039 - 29581140
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  29581039 tttttgtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatt 29581137  T
Q  119 tcg 121  Q
    |||    
T  29581138 tcg 29581140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 43139901 - 43140003
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  43139901 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 43140000  T
Q  119 tcg 121  Q
    |||    
T  43140001 tcg 43140003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 1174084 - 1173982
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||||||||  ||||| |||||||||||||||||||    
T  1174084 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatt 1173985  T
Q  119 tcg 121  Q
    |||    
T  1173984 tcg 1173982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 34739413 - 34739311
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  34739413 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 34739314  T
Q  119 tcg 121  Q
    |||    
T  34739313 tcg 34739311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 45874188 - 45874088
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  45874188 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 45874089  T
Q  119 t 119  Q
    |    
T  45874088 t 45874088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 53457957 - 53457855
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  || |||||||| |||||| |||||||| ||||||||||    
T  53457957 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatt 53457858  T
Q  119 tcg 121  Q
    |||    
T  53457857 tcg 53457855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 54768427 - 54768529
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| ||||  |||||| |||| |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  54768427 ttttggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatt 54768526  T
Q  119 tcg 121  Q
    |||    
T  54768527 tcg 54768529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 12735564 - 12735464
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||| ||||||| ||||| |||||| |||||    
T  12735564 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttacaatt 12735465  T
Q  119 t 119  Q
    |    
T  12735464 t 12735464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 23710338 - 23710430
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||    |||||||| | |||||||||||||||||||||||||||||    
T  23710338 agatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcg 23710430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 55214785 - 55214685
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||| ||| |||| |||||||||||||| |||| |||||||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  55214785 tttttatcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 55214686  T
Q  119 t 119  Q
    |    
T  55214685 t 55214685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 18257462 - 18257360
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||| || ||||||||||||  ||| ||||||| || ||| |||||||||||||||||||    
T  18257462 tttttgtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatt 18257363  T
Q  119 tcg 121  Q
    |||    
T  18257362 tcg 18257360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 19849498 - 19849600
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||  |||| |||||||||||| ||||||||||||  ||||||||||| || |||||||||||||||||||||||    
T  19849498 ttttggtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatt 19849597  T
Q  119 tcg 121  Q
    |||    
T  19849598 tcg 19849600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 26424853 - 26424954
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| ||||||| |||||||||||    
T  26424853 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgcaatt 26424951  T
Q  119 tcg 121  Q
    |||    
T  26424952 tcg 26424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 19673924 - 19674025
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| | ||||||||||||||||| |||||||||||| ||||||| |||||||||  |||||||||||  |||||| |||| |||||||||||||    
T  19673924 tttttgtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgcaatt 19674023  T
Q  119 tc 120  Q
    ||    
T  19674024 tc 19674025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 23417478 - 23417578
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||| | |||  ||||||||||| ||||||| ||||||||||||||||||    
T  23417478 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 23417577  T
Q  119 t 119  Q
    |    
T  23417578 t 23417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 19814238 - 19814137
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||| |||||||||   |||| |||||  ||||||||||||||||||| |||||    
T  19814238 tttttgtcatagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttacaatt 19814139  T
Q  119 tc 120  Q
    ||    
T  19814138 tc 19814137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 39807963 - 39807875
Alignment:
Q  33 gaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||  | ||||||||  ||||||||| ||| |||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttcg 39807875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 238464 - 238555
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||||||||  ||||| | ||||| ||||||||||||||    
T  238464 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcg 238555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 12867974 - 12867872
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| ||||||||| || ||||||||| ||   |||||||||  ||||||||||||||| ||||||||||    
T  12867974 ttttggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatt 12867875  T
Q  119 tcg 121  Q
    |||    
T  12867874 tcg 12867872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19225392 - 19225290
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||| || || |||||||||  ||||||||||| || ||| |||||||||| || |||||    
T  19225392 tttttgtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttacaatt 19225293  T
Q  119 tcg 121  Q
    |||    
T  19225292 tcg 19225290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 11278111 - 11278013
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| |||||||||||||||    |||||||||||  ||||| ||||| |||||| || ||||||||||||||||    
T  11278111 ttttggtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatt 11278016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 24417873 - 24417974
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||||||||  || |||||||||||||||  ||||||||||||  || ||||||||||||  || |||||||| |||||||||||||  |||||||||||    
T  24417873 tttttgtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgcaatt 24417972  T
Q  119 tc 120  Q
    ||    
T  24417973 tc 24417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 2864743 - 2864843
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||| | |||||||||||||| ||   |||||||| |||||||| |||| ||||||  | |||||||||| |||||||||||||| |||||||||||    
T  2864743 tttttgtgttagatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatt 2864842  T
Q  119 t 119  Q
    |    
T  2864843 t 2864843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1966683 - 1966624
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  1966683 tttttgtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtc 1966624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 55400356 - 55400259
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||||||| |||| |||||||||| | |||| ||||||   | ||||||| | || ||| ||||||||||||||||||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcg 55400259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 2075638 - 2075538
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||| ||||| |||  ||  ||||||||||||||||||||||||||||||  |||||||||||    ||| |||||||| ||||||||||    
T  2075638 tttttgtcttagataaagtgataaatcattgaaattaaactcacacataactgtgaggtcccgggttcgaacccaaatcatgacgtccgcccttgcaatt 2075539  T
Q  119 t 119  Q
    |    
T  2075538 t 2075538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 31015115 - 31015057
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggt 77  Q
    ||||||||| ||||||||||||||  ||| ||||||||||||||||| |||||||||||    
T  31015115 tttttgtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 22910269 - 22910354
Alignment:
Q  36 gtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| |  ||||||||||| | ||| ||||||||| ||   |||||||||| ||||||||||||||| |||||||||||||    
T  22910269 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcg 22910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 22968253 - 22968168
Alignment:
Q  36 gtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| |  ||||||||||| | ||| ||||||||| ||   |||||||||| ||||||||||||||| |||||||||||||    
T  22968253 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcg 22968168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 24517978 - 24518079
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||| |||||||||| ||   ||||||||||||||||||| |||||| |   ||||||||||  ||||||| |||||||| ||| |||||    
T  24517978 tttttgtctgagattaagtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtcttacaatt 24518077  T
Q  119 tc 120  Q
    ||    
T  24518078 tc 24518079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 52172000 - 52172085
Alignment:
Q  34 aagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||||| ||||||||||||||||| || ||||||||  | ||||| |||| |  |||||||||| |||||| ||||||    
T  52172000 aagtggtaatccactgaaattaaactcacacacaattgtgaggttctaggttcaaacccgaatcacgacgtctggccttacaattt 52172085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 33770701 - 33770629
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacc 91  Q
    ||||||||| |||||||| ||||| |||| ||||||||||||||||| |||| ||| |||  |||||||||||    
T  33770701 tttttgtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaacc 33770629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 516461 - 516551
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    ||||||||  |||||||||||||| |||||||||||| || |||||| || ||||||| |||  | ||||| ||||||  |||||||||||    
T  516461 agatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttcaaactcgagtcacaacgtccaaccttgcaattt 516551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 37134166 - 37134080
Alignment:
Q  34 aagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    ||||||||| |||| ||||||||||||||||| |||||||| ||   ||||||||||| || ||| ||| |||| ||||| ||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttc 37134080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 49030754 - 49030835
Alignment:
Q  39 gtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| ||| ||||||||||||| |||| ||||||    |||||||||  || ||||||||||||||||||||||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggt-tccggttcgaactcggatcacgacgtccggccttgcaatttcg 49030835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 50347324 - 50347370
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacaca 65  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||    
T  50347324 tttttgtcttagatgaggtggtaatccactgaaattaaactcacaca 50347370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 2804641 - 2804555
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||||||||  |||||||||||||| | |||  | ||||| | |||||||||| ||||||| ||||||| |||| ||||||    
T  2804641 atgaagtggtaatccacttaaattaaactcacataaaac--taaggtcctaggttcgaacccgggtcacaacgtccgaccttacaattt 2804555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 37620739 - 37620678
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacc 91  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||  ||  |||||||||||    
T  37620739 gatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaacc 37620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 52768296 - 52768396
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||| ||||||||||  ||||||||||||||||| ||||||||| || | ||||||||   |  |||||||||||| ||||||| ||    
T  52768296 ttttggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaattcgaatcacgacgtccgaccttgcagtt 52768394  T
Q  119 tc 120  Q
    ||    
T  52768395 tc 52768396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 3465842 - 3465783
Alignment:
Q  62 cacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| |||| |||||||  | |||||||||||| |||| |||||||||||||||||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcg 3465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 23532180 - 23532125
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    ||||||| | ||| ||||||||||| ||| ||||||||||||||||| ||||||||    
T  23532180 tttttgttttagaagaagtggtaattcactgaaattaaactcacacacaactgtga 23532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 32778238 - 32778158
Alignment:
Q  37 tggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||  ||| ||||||||||||  | |||||||||  | ||||||||| || |||||||||||| |||||||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattt 32778158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 106
Target Start/End: Complemental strand, 50033515 - 50033428
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtcc 106  Q
    ||||||||| | ||||||||||||| ||  ||||||||||| ||||| |||||||| |||    ||||||||| ||||||| ||||||    
T  50033515 tttttgtcttatatgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtcacaacgtcc 50033428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 51287735 - 51287676
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggt 77  Q
    ||||||||| ||||||| ||||||| ||| ||||||||| |||||||| |||||||||||    
T  51287735 tttttgtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggt 51287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 32441127 - 32441181
Alignment:
Q  67 aactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||  ||||||||||| |||||| || ||| |||||||||||||||    
T  32441127 aactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcg 32441181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 41001535 - 41001576
Alignment:
Q  37 tggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||| ||| |||||||||||||||||||| |||||||||    
T  41001535 tggtaatgcactgaaattaaactcacacataattgtgaggtc 41001576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 48822934 - 48822890
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    |||||||||||||| |  ||||||||||||||||| |||||||||    
T  48822934 atgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 33083549 - 33083651
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  33083549 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 33083648  T
Q  119 tcg 121  Q
    |||    
T  33083649 tcg 33083651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 10639601 - 10639703
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  10639601 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 10639700  T
Q  119 tcg 121  Q
    |||    
T  10639701 tcg 10639703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 34460502 - 34460400
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||||||||  |||||||||||| ||||||| ||||||||||||||||||    
T  34460502 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatt 34460403  T
Q  119 tcg 121  Q
    |||    
T  34460402 tcg 34460400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 37197605 - 37197707
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  37197605 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatt 37197704  T
Q  119 tcg 121  Q
    |||    
T  37197705 tcg 37197707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 39535529 - 39535631
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||| |  |||||||||||||| | ||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  39535529 tttttgtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatt 39535628  T
Q  119 tcg 121  Q
    |||    
T  39535629 tcg 39535631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 29659213 - 29659313
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||| | || ||||||| |||||    
T  29659213 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggccttacaatt 29659312  T
Q  119 t 119  Q
    |    
T  29659313 t 29659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 26605757 - 26605655
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||| ||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  26605757 ttttggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 26605658  T
Q  119 tcg 121  Q
    |||    
T  26605657 tcg 26605655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 11708801 - 11708709
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  11708801 agatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcg 11708709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 23839992 - 23839892
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||   ||||||||||  |||||| ||||||||||||||||||    
T  23839992 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaatt 23839893  T
Q  119 t 119  Q
    |    
T  23839892 t 23839892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 11459848 - 11459746
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||  |||| ||||| |||||| ||||||||||||  ||||||||||| |||||| |||||||| ||||||||||    
T  11459848 ttttggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatt 11459749  T
Q  119 tcg 121  Q
    |||    
T  11459748 tcg 11459746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19048887 - 19048785
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||| || |||||||||  ||||||||||| || ||| ||||||||||||| |||||    
T  19048887 tttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatt 19048788  T
Q  119 tcg 121  Q
    |||    
T  19048787 tcg 19048785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19537440 - 19537338
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| ||||| |||||| |||||||||||   ||||||||||| || |||| ||||||||||||||||||    
T  19537440 ttttggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatt 19537341  T
Q  119 tcg 121  Q
    |||    
T  19537340 tcg 19537338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 38440192 - 38440294
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||| ||  ||||||   |||||| | | ||||||||||||||||||||||||||    
T  38440192 tttttgtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatt 38440291  T
Q  119 tcg 121  Q
    |||    
T  38440292 tcg 38440294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 39831439 - 39831540
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||| || |||||||||   |||||||||| || ||| |||||||||||||||||||    
T  39831439 tttttgtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtc-ccggttcgaacccggatcatgacgtccggccttgcaatt 39831537  T
Q  119 tcg 121  Q
    |||    
T  39831538 tcg 39831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 4851442 - 4851351
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||  ||||| ||||| || |||||||||||||| || ||||||||    
T  4851442 gatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttcg 4851351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 11816545 - 11816648
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||| | |||||||||||   |||||||||||  |||||||||||||| |||||||||    
T  11816545 ttttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaat 11816644  T
Q  118 ttcg 121  Q
    ||||    
T  11816645 ttcg 11816648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 7275881 - 7275983
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||   |||||||| | ||||| ||||||||||||  ||||||||||| ||| |||||| |||| ||||||||||    
T  7275881 tttttgtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatt 7275980  T
Q  119 tcg 121  Q
    |||    
T  7275981 tcg 7275983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 33001835 - 33001763
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacc 91  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||| || |||||||||    
T  33001835 tttttgtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaacc 33001763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 40786218 - 40786306
Alignment:
Q  33 gaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||| |||| |||  |||||||||||||||  ||||| |||||| | |||||||||| |||||||||||||||||||||||||||||    
T  40786218 gaagtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcg 40786306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 43778467 - 43778565
Alignment:
Q  23 tgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||| ||||||||||||||||||  |||| |||||||||||| |||||||| ||| | ||||||||||  ||||||||| | |||| |||||||||||    
T  43778467 tgtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttcg 43778565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 45125160 - 45125262
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||||||||   | |||||||||   ||||| |||||||||||| |||||    
T  45125160 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatt 45125259  T
Q  119 tcg 121  Q
    |||    
T  45125260 tcg 45125262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 27137913 - 27138006
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcctt 112  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||| | |||||| |||||  |||||||||||  |||||||| || |||||||    
T  27137913 ttttggtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt 27138006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 4800999 - 4800907
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||| ||| | ||||||||||||||||||| | |||||   ||||||||||   ||||||||||||| ||||||||||||||    
T  4800999 agatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttcg 4800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 7349221 - 7349133
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||||||||||| ||||||  ||||||||||||||||||  |||||||||  || |||||||  || ||||||||||||||||||||||    
T  7349221 agatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaat 7349133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 42025804 - 42025701
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaa-actcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||||||| ||||||||||||| ||||| |||||||| ||||||||| || ||||||||  |||||||||||   ||||||||| |||||||||  |||    
T  42025804 tttttgtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggccttaaaat 42025705  T
Q  118 ttcg 121  Q
    ||||    
T  42025704 ttcg 42025701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 19816353 - 19816251
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||| |||||| || |||| |||||||| ||| ||||| |||||   |||||| |||| ||||||| ||||||||||||||||||    
T  19816353 ttttggtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatt 19816254  T
Q  119 tcg 121  Q
    |||    
T  19816253 tcg 19816251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 42578301 - 42578243
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggt 77  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||    
T  42578301 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 43684202 - 43684100
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||| | ||||||||||||||||||  |||| ||||||||||||||| |||| ||||  |||||||||||   |||| |  ||||||||||||||||    
T  43684202 tttttgttttagatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatt 43684103  T
Q  119 tcg 121  Q
    |||    
T  43684102 tcg 43684100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 15782712 - 15782621
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||| |||| |||||||||||| |||| | |||| |||||  ||||||||||| |||||| |||||||| |||| ||||||||    
T  15782712 agatgaagtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcg 15782621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 16654486 - 16654394
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||| || ||| |||  ||| |||||||||||| |||||||||||   ||||||||||  || ||||| ||||||||||||||||||||    
T  16654486 agatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcg 16654394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 25501840 - 25501879
Alignment:
Q  81 gggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  25501840 gggttcgaacctaggtcacgacgtccggccttgcaatttc 25501879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 33564934 - 33565004
Alignment:
Q  49 gaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||||||  ||| | |||||  |||||||||||| ||||||||||||| ||||| ||||||||    
T  33564934 gaaattaaactcacaca--actataaggtctcgggttcgaacctaggtcacgacgtccagccttacaatttcg 33565004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 38400569 - 38400500
Alignment:
Q  52 attaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| |||| |||| ||||||| ||| ||||||||  ||||||||||||||  ||||||||||||    
T  38400569 attaaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaatttcg 38400500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 44181882 - 44181938
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    ||||||||| |||| ||||| |||||||| |||| |||||||||||| |||||||||    
T  44181882 tttttgtcttagattaagtgataatccactgaaaataaactcacacacaactgtgag 44181938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 34239815 - 34239917
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| | |||||||||||||  |  ||||||||||||| ||| |||||| ||||  || ||||||||  | ||||||||||| | |||| |||||    
T  34239815 tttttgtcttaaatgaagtggtaatttattgaaattaaactcatacacaactgtaaggttctgagttcgaactcgagtcacgacgtctgaccttacaatt 34239914  T
Q  119 tcg 121  Q
    |||    
T  34239915 tcg 34239917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 20497585 - 20497670
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgt 104  Q
    |||||| || |||||||||||||| |||| ||||| ||||||||| | || ||||||||   ||||| |||||||  |||||||||    
T  20497585 tttttgccttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacctgaatcacgacgt 20497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 34093370 - 34093277
Alignment:
Q  20 ttttgtctcagatgaagtggtaa-tccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcctt 112  Q
    |||||| | |||||||||||||| ||||| ||||||||||||| |||||  ||||| |||  ||||| ||| |||| |||| ||||||| ||||    
T  34093370 ttttgttttagatgaagtggtaagtccactgaaattaaactcatacatatttgtgatgtctcgggtttgaatctggatcacaacgtccgacctt 34093277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 34234662 - 34234561
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||| |||| |||||||||||| ||| || ||||||||||||||||  |||| |||||||  |||||| |||   | |||| || |||| |||||||||    
T  34234662 attttggtcttagatgaagtggtgatctactgaaattaaactcacac--aactatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaat 34234565  T
Q  118 ttcg 121  Q
    ||||    
T  34234564 ttcg 34234561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 5055783 - 5055885
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  5055783 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 5055882  T
Q  119 tcg 121  Q
    |||    
T  5055883 tcg 5055885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 41761417 - 41761508
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  41761417 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcg 41761508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 5943814 - 5943712
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||| |||||||  ||||||||||||||| | |||||||||||| || ||||||||| ||||||||||||||||||||||||||    
T  5943814 tttttgtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatt 5943715  T
Q  119 tcg 121  Q
    |||    
T  5943714 tcg 5943712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28456007 - 28455905
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||||||||||||||    
T  28456007 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatt 28455908  T
Q  119 tcg 121  Q
    |||    
T  28455907 tcg 28455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 32007207 - 32007105
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  32007207 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 32007108  T
Q  119 tcg 121  Q
    |||    
T  32007107 tcg 32007105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 39276471 - 39276381
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||| ||||||| |||||||||||||||||||||    
T  39276471 atgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcg 39276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 41808335 - 41808233
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||||||||   ||||||||||| |||||| |||||||||||||||||||    
T  41808335 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatt 41808236  T
Q  119 tcg 121  Q
    |||    
T  41808235 tcg 41808233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 45813006 - 45813108
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||||| ||||| ||||||||||    
T  45813006 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatt 45813105  T
Q  119 tcg 121  Q
    |||    
T  45813106 tcg 45813108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 48660155 - 48660053
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||| ||||||  ||||||||||||||||||    
T  48660155 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatt 48660056  T
Q  119 tcg 121  Q
    |||    
T  48660055 tcg 48660053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 192548 - 192448
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||| | |||| |||||||||||| |||||||||||| |||||||||||  || |||| ||||||||||||||||||    
T  192548 ttttggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgcaatt 192449  T
Q  119 t 119  Q
    |    
T  192448 t 192448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 13109903 - 13109803
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||  | ||||||||   |||| |||||||||| ||||||||||    
T  13109903 tttttgtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaatt 13109804  T
Q  119 t 119  Q
    |    
T  13109803 t 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 29994378 - 29994480
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| || |||||||||  ||||||||||| || ||| |||||| ||||||||||||    
T  29994378 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatt 29994477  T
Q  119 tcg 121  Q
    |||    
T  29994478 tcg 29994480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 20876 - 20779
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| |||||||||||||||||||  ||| |||||||||||| ||||||||||||  ||||||||| | |||||||| ||||| ||||||||||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcg 20779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 46447368 - 46447474
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaa----ttaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgc 114  Q
    ||||||||| |||||| |||||||||||| ||||    ||||||||||||||||||||||||||  ||||||||||| |||| ||||||||  |||||||    
T  46447368 tttttgtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagccttgc 46447467  T
Q  115 aatttcg 121  Q
    |||||||    
T  46447468 aatttcg 46447474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 50106201 - 50106289
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||||| ||| ||||||| |||| |||||||||||||||||||||||||  ||||||||||| ||||||| |||| ||||||||||||    
T  50106201 agatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgcaat 50106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 7059597 - 7059500
Alignment:
Q  22 ttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||| |||| ||||||||||||||  |||||||||||||||| ||||||||||||   | |||||||| ||||||||||||| | |||||||||||    
T  7059597 ttgtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattt 7059500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 26032934 - 26032846
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccg 107  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||| |||||||||||    |||||||||| |||||||||||||||    
T  26032934 ttttggtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccg 26032846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 778702 - 778608
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| ||||||| ||||||| ||| ||||||||||||||||| |||||| ||||| | |||||||||||| |||||||||| || ||||| ||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacctgagtcacgacgttcgaccttgtaatt 778608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 13097437 - 13097339
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    ||||||||| ||||||||||||||||||   |||||||||||||| | |||||||||||  | |||| ||| | ||||||||||||||| |||||||||    
T  13097437 tttttgtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 35110098 - 35110180
Alignment:
Q  23 tgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtc 105  Q
    ||||| ||||||||||||||||| |  |||||||||||||||| |||||| ||||| |||||||||||| |||||| ||||||    
T  35110098 tgtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtcatgacgtc 35110180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 41039298 - 41039375
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggt 96  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||    
T  41039298 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggt 41039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 35945920 - 35945828
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||| |||| ||||||| |||||||||||   |||||||||||  |||||| |||||| ||||| ||||||||    
T  35945920 agatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttacaatttcg 35945828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 11688385 - 11688294
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||||||||||||||| |||| |||||||||||| |||| ||| ||| ||  |||||||| ||||||| |||| ||| ||||||||||||    
T  11688385 gatgaagtggtaatccactgaaaataaactcacacacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttcg 11688294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 21939076 - 21938973
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||||| ||| |||||||||||||| || | |||||||||||| |||| |||||||||||| ||| |||||| | || ||| ||| ||||||||| ||||    
T  21939076 atttttctcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaat 21938977  T
Q  118 ttcg 121  Q
    ||||    
T  21938976 ttcg 21938973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 35224439 - 35224377
Alignment:
Q  51 aattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgca 115  Q
    |||||||||||||||  ||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  35224439 aattaaactcacaca--actgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgca 35224377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 39284413 - 39284322
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    ||||||| | |||||||||  |||||||||||||| | |||||||||||| | |||||||||| |  |||||||||||| |||| |||||||    
T  39284413 agatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgaccttacaatttc 39284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 29587344 - 29587283
Alignment:
Q  60 cacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||||| || |||||||||  |||||||||||  ||||||||||||||||||||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcg 29587283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 49783835 - 49783738
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| |||||||||||||| |||| ||||||||| ||||| | |||||||||||   ||||||||||| |  ||| ||||| || |||||||||||||    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcg 49783738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 2088910 - 2089002
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||||| |||||||| | || ||||||||  || ||||||||| | ||||||| ||| | |||| ||||||||    
T  2088910 agatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccgagtcacgatgtctgaccttacaatttcg 2089002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 25931152 - 25931207
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||| || |||||    
T  25931152 tttttgtctcagatgaagtggtaatctattgaaattaaactcacacacaattgtga 25931207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 7275814 - 7275712
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||| | |||||||||||||| |||| ||||||||||||| ||| |||||||| ||   ||||||||| | | ||||  ||||||| |||| |||||    
T  7275814 tttttgttttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatt 7275715  T
Q  119 tcg 121  Q
    |||    
T  7275714 tcg 7275712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 3716495 - 3716436
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| ||||||||||  |||||||  ||| |||||||||||| ||||||||||||    
T  3716495 tttttgtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtc 3716436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 9886887 - 9886946
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    |||| |||| ||||||||||||||| ||  || ||||||||||||||||||||| |||||    
T  9886887 ttttggtcttagatgaagtggtaattcagtgatattaaactcacacataactgttaggtc 9886946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 26264531 - 26264618
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtcc 106  Q
    ||||| ||| |||||||||| |||| ||  ||||||||||||||||| |||||||||||    |||||||| ||||| || |||||||    
T  26264531 tttttttcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaatctgggacatgacgtcc 26264618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 13183181 - 13183271
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    ||||||||||||||| ||| ||||||||||||||| | |||||| ||||  | ||||| |||  || | |||| ||||| |||||||||||    
T  13183181 agatgaagtggtaattcactgaaattaaactcacatacaactgtaaggttctaggttcaaactcggattacgatgtccgaccttgcaattt 13183271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 47111542 - 47111488
Alignment:
Q  67 aactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||| |||||| ||||||| ||||  |||||||||||||| |||||||||||||    
T  47111542 aactgcgaggtcctgggttcaaacccaggtcacgacgtccgaccttgcaatttcg 47111488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 4066089 - 4065992
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||| ||| ||||||||||||||| | || ||| |||||   | |||||||| || |||| |||| | | ||||||||||||    
T  4066089 gtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcg 4065992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 857 - 959
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  857 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 956  T
Q  119 tcg 121  Q
    |||    
T  957 tcg 959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 33621627 - 33621525
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  33621627 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 33621528  T
Q  119 tcg 121  Q
    |||    
T  33621527 tcg 33621525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 33704337 - 33704247
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  33704337 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcg 33704247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 2959282 - 2959180
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||  ||||||||||||  |||||||  |||||||||||||||    
T  2959282 ttttggtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatt 2959183  T
Q  119 tcg 121  Q
    |||    
T  2959182 tcg 2959180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 4464260 - 4464158
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||   |||||||||| || ||| |||||||||||||||||||    
T  4464260 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatt 4464161  T
Q  119 tcg 121  Q
    |||    
T  4464160 tcg 4464158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 21000825 - 21000723
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||| || |||||||||  |||||||||||  ||||| ||||| |||||||||||||    
T  21000825 tttttgtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatt 21000726  T
Q  119 tcg 121  Q
    |||    
T  21000725 tcg 21000723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 19145603 - 19145503
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||||| || |||||||||  |||||| || | ||||||||||||||||||||||||||    
T  19145603 tttttgtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttcaaaac-gggtcacgacgtccggccttgcaatt 19145505  T
Q  119 tc 120  Q
    ||    
T  19145504 tc 19145503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 361144 - 361044
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||| |||||||| ||||||||||||||| |||||||||||||   ||||||||||| | ||||||| || |||||||||||||    
T  361144 tttttgtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgcaatt 361045  T
Q  119 t 119  Q
    |    
T  361044 t 361044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 24619072 - 24619174
Alignment:
Q  17 catttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaa 116  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||| || | |||||||| ||| ||||||  |||||||||||| ||||||| |||    
T  24619072 catttttgtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaa 24619171  T
Q  117 ttt 119  Q
    |||    
T  24619172 ttt 24619174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28323065 - 28322963
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||| || |||||||||  ||||||||||| || ||| ||||||||||||| |||||    
T  28323065 tttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatt 28322966  T
Q  119 tcg 121  Q
    |||    
T  28322965 tcg 28322963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 16518554 - 16518456
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||  ||||||||| || ||||||||||||  |||||| ||||||| ||||||||||    
T  16518554 tttttgtcttagatgaaatggtaatccactgaaaataaactcacac--aactgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgcaatt 16518457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 21037423 - 21037323
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||| ||| |||| |||||||||||| ||||||||||||  || |||||||| | ||||| ||||||||||||||||||    
T  21037423 ttttggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggtc-cggattcgaacccgagtcacaacgtccggccttgcaatt 21037325  T
Q  119 tc 120  Q
    ||    
T  21037324 tc 21037323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 11572106 - 11572040
Alignment:
Q  54 taaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttc 120  Q
    |||||||||||| ||||||||||||  ||||||||||| ||||||||||||| |||||| |||||||    
T  11572106 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttc 11572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 22576314 - 22576232
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacga 101  Q
    ||||||||| ||| ||||||||||| ||  ||||| |||||||||||||||||||||||   ||||||||| |||||||||||    
T  22576314 tttttgtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaatctgggtcacga 22576232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 29009645 - 29009738
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggcctt 112  Q
    ||||||||| ||||||||||||||| |||  ||| |||||||||||| ||||||||||||   ||||||||   |||||| |||||||||||||    
T  29009645 tttttgtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccggcctt 29009738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 35218635 - 35218694
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  35218635 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 35218694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 10999403 - 10999505
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |  |||||||||||||||| ||||||||||||||| | ||||||||| |  ||| |||| |||||| ||||  |||||| ||||||| ||    
T  10999403 tttttgtcttatttgaagtggtaatccactgaaattaaactcacatacaactgtgagattttggattcgtacctggatcacttcgtccgaccttgcagtt 10999502  T
Q  119 tcg 121  Q
    |||    
T  10999503 tcg 10999505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Complemental strand, 7613425 - 7613334
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataact-gtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||  ||| ||||||||||||| ||||| || ||||||||   |||||||||||| |||||||  ||||| ||||||||||||    
T  7613425 atgaagtggtaaatcactgaaattaaactcatacatatcttgtgaggtctcaggttcgaacctgagtcacgatatccggtcttgcaatttcg 7613334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 12252157 - 12252058
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||||| ||| | |||||||||||| |||   |||||||||||||||| |||| |||||||  |||||| ||||  ||||||||| ||||| ||||||||    
T  12252157 atttttctcttaaatgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaat 12252058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 9454732 - 9454778
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggt 77  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  9454732 atgaagtggtaaaccactgaaattaaactcacatataactgtgaggt 9454778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 28592123 - 28592188
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggt 84  Q
    ||||||||| |||| || ||||||||||  |||| |||||||||||| |||||||||||| |||||    
T  28592123 tttttgtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtcttgggt 28592188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 584791 - 584880
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||| ||||| | ||||| ||||||||| | || |||||||||  |  |||||| | |||||||||||||| ||||||||||||||    
T  584791 atgaagtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtcc-gccttgcaatttcg 584880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 33688207 - 33688251
Alignment:
Q  67 aactgtgaggtcatgggttcgaacctgggtcacgacgtccggcct 111  Q
    ||||||||||||  || |||||| |||||||||||||||||||||    
T  33688207 aactgtgaggtctcggattcgaatctgggtcacgacgtccggcct 33688251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 7824449 - 7824551
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  7824449 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 7824548  T
Q  119 tcg 121  Q
    |||    
T  7824549 tcg 7824551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 29689482 - 29689579
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||    
T  29689482 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcg 29689579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 55018040 - 55018129
Alignment:
Q  30 gatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattt 55018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 4601558 - 4601456
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||| |||||||||||   ||||||||||| |||||| |||||||||||||||||||    
T  4601558 tttttgtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatt 4601459  T
Q  119 tcg 121  Q
    |||    
T  4601458 tcg 4601456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 54151676 - 54151778
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||| ||| ||||||||||||  ||||||||||| |||||| |||||||||||||||||||    
T  54151676 ttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatt 54151775  T
Q  119 tcg 121  Q
    |||    
T  54151776 tcg 54151778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 54158394 - 54158297
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| || ||| ||||||||||||||||||||||    
T  54158394 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcg 54158297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 9349681 - 9349773
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| || |||||||||||| |||||||||||||    
T  9349681 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttcg 9349773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 43247645 - 43247745
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  |||||||||||  |||||| ||||||||||||||||||    
T  43247645 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaatt 43247744  T
Q  119 t 119  Q
    |    
T  43247745 t 43247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 3112990 - 3113092
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||| ||  ||||||||||  |||| |||||||||||||||||||||    
T  3112990 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatt 3113089  T
Q  119 tcg 121  Q
    |||    
T  3113090 tcg 3113092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 36228989 - 36229091
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||  |||| |||||||||||| ||||||||||||  ||||||||||| || ||| |||||||||||||||||||    
T  36228989 ttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatt 36229088  T
Q  119 tcg 121  Q
    |||    
T  36229089 tcg 36229091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 51665920 - 51666022
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||||| |||||  |||||||||||  ||||| |||||||||||||||||||    
T  51665920 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatt 51666019  T
Q  119 tcg 121  Q
    |||    
T  51666020 tcg 51666022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 38257308 - 38257400
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||  ||||||||||||  |||||||||||||| |||||||||||||    
T  38257308 agatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttcg 38257400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28844638 - 28844535
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaat-taaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||| |||| ||||||||||||||||||| ||||  |||||||||||| |||||||||||    |||||||||| ||||||| |||||||||||||||||    
T  28844638 ttttggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaat 28844539  T
Q  118 ttcg 121  Q
    ||||    
T  28844538 ttcg 28844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 42392800 - 42392902
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||| |||| ||||||||||||||||| || |||||||||  |||||||| || || ||| |||||||| ||||||||||    
T  42392800 ttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatt 42392899  T
Q  119 tcg 121  Q
    |||    
T  42392900 tcg 42392902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 47635001 - 47635099
Alignment:
Q  20 ttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||||||| |||||||||||||||| || ||||||||||| ||||||||||| |||||| ||| ||||||||  |||||| | ||||| ||||||||||    
T  47635001 ttttgtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaatt 47635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 33334741 - 33334639
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| | |||||||| ||||| || ||||||||||||||||| ||||||||||||  || |||||||   |||||| ||||||||| ||||||||    
T  33334741 tttttgtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgcaatt 33334642  T
Q  119 tcg 121  Q
    |||    
T  33334641 tcg 33334639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 52500971 - 52500869
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| |||||||||||||||| || |||| |||||||||||| |||||||||||    |||||||||| || ||| ||||||||||||| |||||    
T  52500971 ttttggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttacaatt 52500872  T
Q  119 tcg 121  Q
    |||    
T  52500871 tcg 52500869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 8151481 - 8151380
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||| |||||||||  |||||||||  ||||||||||| ||||||||||||||| ||  ||||||||||| || ||||||||| || | ||||||||    
T  8151481 tttttgtttcagatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacccggatcacgacgttcgtctttgcaatt 8151382  T
Q  119 tc 120  Q
    ||    
T  8151381 tc 8151380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 35461473 - 35461576
Alignment:
Q  18 atttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||||| ||| ||||||| || ||||| || |||| |||||||||||| |||||||||||   ||||||||||| || |||| ||||||| |||||||||    
T  35461473 atttttatcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaat 35461572  T
Q  118 ttcg 121  Q
    ||||    
T  35461573 ttcg 35461576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 448884 - 448970
Alignment:
Q  33 gaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||||||||||  |||||||||||||| | |||||||||||| | ||||||||   || ||||||||||||||||| ||||||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattt 448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 1778984 - 1778882
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||||| || ||||||||||||||||||  |||| |||| ||| ||| || ||||||||   ||||||||||| ||||||| | ||||||||||||||||    
T  1778984 tttttggcttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatt 1778885  T
Q  119 tcg 121  Q
    |||    
T  1778884 tcg 1778882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 475276 - 475376
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||| ||| ||| ||||||||||||| |||||||||||   | ||||||||| || ||| |||||||| ||||||||||    
T  475276 ttttagtcttagatgaagtggtaattcactgaa-ttaaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatt 475374  T
Q  119 tc 120  Q
    ||    
T  475375 tc 475376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 41377712 - 41377617
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||| | |||| ||||||||||||     ||||||||  |||||||||||||| ||| ||||||||||||| |||||    
T  41377712 ttttggtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttacaatt 41377618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 7958692 - 7958621
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacg 100  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||||||||| || |||||    
T  7958692 agatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccggatcacg 7958621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 55320395 - 55320454
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||| |||| |||||||    
T  55320395 tttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtc 55320454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 32001419 - 32001521
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| | ||||||||||||  ||| |||| |||||||||||| ||||||||| ||  | |||||||||||| ||| || || ||||||| |||||    
T  32001419 tttttgtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttacaatt 32001518  T
Q  119 tcg 121  Q
    |||    
T  32001519 tcg 32001521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 29750748 - 29750652
Alignment:
Q  24 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    |||| ||||||||||||||||||| ||| |||| ||||| || || |||||||||    ||||||| | |||||||||||||| ||||||||||||||    
T  29750748 gtcttagatgaagtggtaatccactgaatttaa-ctcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcg 29750652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 43775356 - 43775300
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| | | |||||||||    
T  43775356 tttttgtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgag 43775300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 27230799 - 27230744
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtga 74  Q
    ||||||||| ||||||||||||||| ||| ||||||||| ||||||| ||||||||    
T  27230799 tttttgtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga 27230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 2590805 - 2590847
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactca 61  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  2590805 tttttgtcttagatgaagtggtaatccactgaaattaaactca 2590847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 28458795 - 28458694
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||||  |  ||| ||||||| ||||  |||||||||||  ||||||| |||| || ||||||| || ||||||||||||    
T  28458795 tttttgtcttagatgaagtggtaatttattgaagttaaacttacacgcaactgtgaggttctgggttcaaacc-ggatcacgacatctggccttgcaatt 28458697  T
Q  119 tcg 121  Q
    |||    
T  28458696 tcg 28458694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 40756722 - 40756792
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaa 89  Q
    ||||| ||| |||||||||||||| | || ||||||||||||||||  ||||||||||||  |||||||||    
T  40756722 tttttatcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaa 40756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 50729657 - 50729598
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| |||||||||||||||| |  ||||||||||||||| | ||||| ||||||    
T  50729657 tttttgtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtc 50729598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 50783192 - 50783251
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtc 78  Q
    ||||||||| |||||||||||||||| |  ||||||||||||||| | ||||| ||||||    
T  50783192 tttttgtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtc 50783251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 53182856 - 53182808
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacacataactgtgaggt 77  Q
    |||||||||||||| || |  ||||||||||||||||||| ||||||||    
T  53182856 agatgaagtggtaaacccctaaaattaaactcacacataattgtgaggt 53182808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 22295 - 22194
Alignment:
Q  20 ttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaattt 119  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||  ||| ||||||| |||||||||||||||||||| ||||||    
T  22295 ttttgtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaattt 22196  T
Q  120 cg 121  Q
    ||    
T  22195 cg 22194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 13946 - 14048
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| || |||| ||||||||||||||||||    
T  13946 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatt 14045  T
Q  119 tcg 121  Q
    |||    
T  14046 tcg 14048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 19626 - 19728
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| || |||| ||||||||||||||||||    
T  19626 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatt 19725  T
Q  119 tcg 121  Q
    |||    
T  19726 tcg 19728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 9968 - 10070
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| |||| |||||||  ||||||||||| |||| |||||||||||||||||||||    
T  9968 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatt 10067  T
Q  119 tcg 121  Q
    |||    
T  10068 tcg 10070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 56614 - 56512
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||  ||||||||||| ||||||| ||||||| ||||||||||    
T  56614 ttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatt 56515  T
Q  119 tcg 121  Q
    |||    
T  56514 tcg 56512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 114385 - 114283
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| |||||||||||||| |||| |||| |||||||||||| || |||||||||  ||||||||||| || ||| ||||||||||||| |||||    
T  114385 tttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatt 114286  T
Q  119 tcg 121  Q
    |||    
T  114285 tcg 114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 34952 - 34849
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaa-ctcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaat 117  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||| | ||||| |||||| ||| ||||||||   |||||||||||||||||||||||    
T  34952 ttttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaat 34853  T
Q  118 ttcg 121  Q
    ||||    
T  34852 ttcg 34849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 8938 - 9040
Alignment:
Q  19 tttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatt 118  Q
    ||||||||| ||||||||||||||  ||| ||||||||||||||||| |||||||||||| | |||||||||| |  |||  |||||| ||||| |||||    
T  8938 tttttgtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccgaatcataacgtcccgccttacaatt 9037  T
Q  119 tcg 121  Q
    |||    
T  9038 tcg 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 69 - 121
Target Start/End: Complemental strand, 14578 - 14526
Alignment:
Q  69 ctgtgaggtcatgggttcgaacctgggtcacgacgtccggccttgcaatttcg 121  Q
    ||||||||||  ||||||||||| || ||||||||||||||||||||||||||    
T  14578 ctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcg 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 14628 - 14592
Alignment:
Q  29 agatgaagtggtaatccaccgaaattaaactcacaca 65  Q
    |||| |||||||||||||| |||||||||||||||||    
T  14628 agattaagtggtaatccactgaaattaaactcacaca 14592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 15141 - 15185
Alignment:
Q  31 atgaagtggtaatccaccgaaattaaactcacacataactgtgag 75  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||    
T  15141 atgaagtggtaagccactgaaattaaacttacacgtaactgtgag 15185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University