View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13920_low_21 (Length: 250)
Name: NF13920_low_21
Description: NF13920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13920_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 39999495 - 39999715
Alignment:
| Q |
18 |
attattatggaaaaaaccctacagcatgtctctgctaatcccaacttacctgctaaggtgcttagattgcatttccatgactattttgtcaaggtaaatc |
117 |
Q |
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| T |
39999495 |
attattatggaaaaaaccctacagtatgtctctgctaatcccaacttacctgctaaggtgcttagattgcatttccatgactattttgtcaaggtaaatc |
39999594 |
T |
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| Q |
118 |
catacaccaaaacttttatgcagttatgtttcattttatgaatatttgtgtgtgtaatattacgagtagcatttcaacatgacaatgtgtataacataga |
217 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39999595 |
catacaccaaaacttttatgcagtcatgtttcattttatgaatatttgtgtgtgtaatattacgagtagcatttcaacatgacaatgtgtataacataga |
39999694 |
T |
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| Q |
218 |
ttgcaaatatgtacatttctg |
238 |
Q |
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||||||||||||||||||||| |
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| T |
39999695 |
ttgcaaatatgtacatttctg |
39999715 |
T |
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