View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13922_high_19 (Length: 225)
Name: NF13922_high_19
Description: NF13922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13922_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 16991187 - 16991019
Alignment:
| Q |
39 |
gaagggacttatgtacttctatatatttaaagagtaaatgattattgaacataaactcatcaaacttgattttttacaagattaattgaannnnnnnnnn |
138 |
Q |
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| T |
16991187 |
gaagggacttatgtacttctatatatttaaagagtaaatgattatcgaacataaactcatcaaacttgattttttacaagattaattgaa--tttttttt |
16991090 |
T |
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| Q |
139 |
nnnnacaaaaggattaatttaagttaattgttgtgtatattcttgccaatggcaagttgccatatgagtat |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16991089 |
ttttacaaaaggattaatttaagttaattgttgtgtatattcttgccaatggcaagttgccatatgagtat |
16991019 |
T |
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