View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13923_low_2 (Length: 294)

Name: NF13923_low_2
Description: NF13923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13923_low_2
NF13923_low_2
[»] chr8 (66 HSPs)
chr8 (13-169)||(37985850-37986006)
chr8 (13-168)||(17841645-17841801)
chr8 (13-169)||(26041907-26042064)
chr8 (13-169)||(40779923-40780080)
chr8 (13-168)||(6108028-6108184)
chr8 (24-169)||(15187686-15187831)
chr8 (13-169)||(1645758-1645916)
chr8 (13-166)||(20091598-20091752)
chr8 (13-166)||(34665496-34665649)
chr8 (13-168)||(3596836-3596992)
chr8 (13-168)||(25581034-25581190)
chr8 (13-166)||(38017048-38017201)
chr8 (13-168)||(42754837-42754993)
chr8 (68-168)||(10044518-10044618)
chr8 (13-169)||(32064859-32065017)
chr8 (68-167)||(14129029-14129128)
chr8 (68-166)||(24211169-24211267)
chr8 (74-169)||(1503637-1503732)
chr8 (13-168)||(30055631-30055786)
chr8 (13-156)||(35353155-35353299)
chr8 (13-156)||(32393972-32394114)
chr8 (13-143)||(8453948-8454078)
chr8 (27-157)||(39772608-39772739)
chr8 (80-169)||(31347570-31347659)
chr8 (69-166)||(37132477-37132575)
chr8 (78-169)||(7022159-7022250)
chr8 (76-165)||(3890412-3890502)
chr8 (30-169)||(30834849-30834989)
chr8 (76-137)||(41819594-41819655)
chr8 (30-168)||(24844655-24844793)
chr8 (78-169)||(7017652-7017743)
chr8 (13-58)||(24211459-24211504)
chr8 (13-58)||(7017771-7017816)
chr8 (92-156)||(27782105-27782170)
chr8 (92-156)||(32064757-32064822)
chr8 (92-156)||(34665394-34665459)
chr8 (92-156)||(42755030-42755095)
chr8 (92-164)||(30835035-30835107)
chr8 (106-156)||(1886621-1886672)
chr8 (92-164)||(6108221-6108294)
chr8 (92-156)||(7021990-7022055)
chr8 (13-58)||(7022092-7022137)
chr8 (92-156)||(17841838-17841903)
chr8 (92-156)||(20091789-20091854)
chr8 (92-129)||(25581227-25581264)
chr8 (13-54)||(27782027-27782068)
chr8 (13-128)||(27835288-27835404)
chr8 (92-137)||(31347770-31347815)
chr8 (92-164)||(39772789-39772862)
chr8 (92-156)||(40780117-40780182)
chr8 (13-58)||(41819684-41819729)
chr8 (101-156)||(38016983-38017039)
chr8 (99-137)||(3890611-3890649)
chr8 (92-138)||(7017853-7017899)
chr8 (92-165)||(24844847-24844920)
chr8 (92-137)||(3597029-3597074)
chr8 (92-156)||(8453846-8453911)
chr8 (13-58)||(10044457-10044502)
chr8 (92-156)||(14128876-14128941)
chr8 (92-156)||(15187572-15187637)
chr8 (92-137)||(15972865-15972910)
chr8 (92-156)||(26042104-26042169)
chr8 (13-58)||(31347688-31347733)
chr8 (92-156)||(32393870-32393935)
chr8 (92-156)||(35353053-35353118)
chr8 (92-156)||(37986043-37986108)
[»] chr7 (35 HSPs)
chr7 (13-169)||(45637826-45637982)
chr7 (13-168)||(24395086-24395241)
chr7 (13-169)||(3962093-3962249)
chr7 (13-169)||(48880721-48880878)
chr7 (13-168)||(34482949-34483108)
chr7 (13-169)||(42611925-42612082)
chr7 (13-168)||(30848683-30848839)
chr7 (13-166)||(4974532-4974686)
chr7 (15-169)||(15577641-15577799)
chr7 (13-169)||(15329387-15329545)
chr7 (13-168)||(25167651-25167801)
chr7 (68-169)||(35445567-35445668)
chr7 (68-168)||(35876414-35876514)
chr7 (13-169)||(42696197-42696355)
chr7 (206-277)||(16848140-16848211)
chr7 (68-159)||(29737314-29737406)
chr7 (13-167)||(37476876-37477031)
chr7 (13-166)||(20009895-20010049)
chr7 (13-169)||(18037092-18037248)
chr7 (78-169)||(15238564-15238655)
chr7 (92-156)||(4974723-4974788)
chr7 (92-156)||(42611823-42611888)
chr7 (92-156)||(45637724-45637789)
chr7 (13-55)||(15238496-15238538)
chr7 (95-156)||(15577841-15577903)
chr7 (102-168)||(40880641-40880706)
chr7 (92-137)||(15238414-15238459)
chr7 (92-156)||(15329285-15329350)
chr7 (92-156)||(34482847-34482912)
chr7 (104-168)||(36790271-36790336)
chr7 (92-156)||(48880915-48880980)
chr7 (13-55)||(35444672-35444714)
chr7 (92-156)||(18036990-18037055)
chr7 (92-156)||(24394984-24395049)
chr7 (92-129)||(35444598-35444635)
[»] chr3 (52 HSPs)
chr3 (13-169)||(22426139-22426295)
chr3 (24-168)||(30385526-30385670)
chr3 (13-168)||(19650695-19650850)
chr3 (13-169)||(33113907-33114065)
chr3 (13-169)||(3137208-3137365)
chr3 (13-169)||(3456178-3456335)
chr3 (13-168)||(3574321-3574477)
chr3 (13-169)||(37216847-37217004)
chr3 (13-168)||(3089531-3089689)
chr3 (13-169)||(6041998-6042148)
chr3 (68-169)||(34482682-34482783)
chr3 (13-168)||(37522167-37522323)
chr3 (68-167)||(8320378-8320477)
chr3 (13-168)||(2754831-2754989)
chr3 (13-169)||(48161019-48161177)
chr3 (68-168)||(47738281-47738382)
chr3 (13-166)||(33145826-33145980)
chr3 (68-168)||(26612916-26613017)
chr3 (26-169)||(36864826-36864969)
chr3 (78-169)||(40328011-40328103)
chr3 (13-156)||(33839645-33839794)
chr3 (68-167)||(46919064-46919164)
chr3 (78-169)||(8361833-8361924)
chr3 (78-168)||(9796824-9796914)
chr3 (69-168)||(24343720-24343820)
chr3 (78-169)||(41224414-41224505)
chr3 (13-128)||(42297978-42298092)
chr3 (68-166)||(42921295-42921394)
chr3 (13-153)||(41883031-41883174)
chr3 (92-164)||(9797017-9797090)
chr3 (13-58)||(30385125-30385170)
chr3 (92-156)||(2754729-2754794)
chr3 (92-156)||(47738117-47738182)
chr3 (92-156)||(3137402-3137467)
chr3 (92-156)||(3574515-3574580)
chr3 (92-156)||(6041896-6041961)
chr3 (13-58)||(8361951-8361996)
chr3 (92-137)||(8362033-8362078)
chr3 (92-164)||(19650888-19650961)
chr3 (13-50)||(34482824-34482861)
chr3 (13-58)||(40327939-40327984)
chr3 (13-58)||(42297468-42297513)
chr3 (13-58)||(47738219-47738264)
chr3 (13-105)||(11347382-11347476)
chr3 (92-156)||(33145725-33145789)
chr3 (13-58)||(9796935-9796980)
chr3 (92-156)||(11347280-11347345)
chr3 (92-164)||(22426332-22426405)
chr3 (92-156)||(37217041-37217106)
chr3 (29-58)||(41224363-41224392)
chr3 (92-137)||(41883211-41883256)
chr3 (92-155)||(30385024-30385088)
[»] chr1 (42 HSPs)
chr1 (13-169)||(44094812-44094968)
chr1 (13-169)||(36966502-36966659)
chr1 (13-167)||(40215102-40215257)
chr1 (13-169)||(19015518-19015675)
chr1 (13-168)||(25463790-25463946)
chr1 (13-169)||(41876236-41876393)
chr1 (13-169)||(51737619-51737776)
chr1 (13-168)||(6883601-6883757)
chr1 (13-168)||(9910086-9910244)
chr1 (13-168)||(37821629-37821785)
chr1 (13-169)||(20304924-20305082)
chr1 (13-168)||(3559731-3559887)
chr1 (23-168)||(25973533-25973677)
chr1 (68-169)||(18404618-18404719)
chr1 (92-168)||(19722894-19722970)
chr1 (78-169)||(33786425-33786516)
chr1 (78-168)||(32000061-32000151)
chr1 (13-166)||(44690818-44690980)
chr1 (78-166)||(40273888-40273976)
chr1 (13-169)||(27523049-27523206)
chr1 (68-169)||(10167569-10167671)
chr1 (92-165)||(33786623-33786696)
chr1 (96-167)||(52064373-52064445)
chr1 (92-156)||(16045786-16045851)
chr1 (92-156)||(40215000-40215065)
chr1 (92-164)||(40273706-40273779)
chr1 (13-58)||(40273816-40273861)
chr1 (76-131)||(52329453-52329508)
chr1 (92-156)||(18404454-18404519)
chr1 (13-58)||(18404556-18404601)
chr1 (92-156)||(25463688-25463753)
chr1 (92-156)||(44094710-44094775)
chr1 (92-143)||(6883513-6883564)
chr1 (27-58)||(32000173-32000204)
chr1 (13-56)||(33786543-33786586)
chr1 (92-156)||(9910281-9910346)
chr1 (92-156)||(19015416-19015481)
chr1 (92-156)||(32000255-32000320)
chr1 (92-156)||(36966696-36966761)
chr1 (92-156)||(37821822-37821887)
chr1 (92-156)||(44691017-44691082)
chr1 (76-168)||(22157333-22157425)
[»] scaffold0085 (2 HSPs)
scaffold0085 (13-168)||(47964-48119)
scaffold0085 (92-155)||(47863-47927)
[»] chr4 (58 HSPs)
chr4 (13-168)||(36073464-36073619)
chr4 (13-169)||(2624951-2625108)
chr4 (13-169)||(53123145-53123302)
chr4 (13-169)||(7744906-7745063)
chr4 (13-169)||(21802114-21802273)
chr4 (13-169)||(46441958-46442115)
chr4 (13-169)||(22199375-22199530)
chr4 (13-166)||(9088984-9089138)
chr4 (13-169)||(47290180-47290337)
chr4 (13-169)||(49387681-49387839)
chr4 (13-169)||(36073061-36073222)
chr4 (13-169)||(44893007-44893164)
chr4 (13-169)||(50156373-50156529)
chr4 (13-169)||(10442581-10442740)
chr4 (13-168)||(44893540-44893696)
chr4 (13-169)||(4751560-4751718)
chr4 (13-169)||(31078613-31078770)
chr4 (13-166)||(24128353-24128507)
chr4 (68-168)||(33530479-33530579)
chr4 (13-158)||(23964269-23964416)
chr4 (13-170)||(37934734-37934892)
chr4 (13-137)||(30563323-30563448)
chr4 (68-169)||(37219801-37219903)
chr4 (13-166)||(17655544-17655699)
chr4 (13-168)||(42671783-42671939)
chr4 (71-169)||(11314045-11314144)
chr4 (78-166)||(24392854-24392942)
chr4 (19-167)||(44744554-44744698)
chr4 (102-168)||(25063369-25063436)
chr4 (92-156)||(33530676-33530741)
chr4 (92-156)||(10442777-10442842)
chr4 (92-156)||(31078807-31078872)
chr4 (76-168)||(36073256-36073349)
chr4 (92-156)||(49387876-49387941)
chr4 (13-57)||(36073650-36073694)
chr4 (92-155)||(36073731-36073795)
chr4 (92-156)||(2624849-2624914)
chr4 (92-156)||(7745100-7745165)
chr4 (92-156)||(21802310-21802375)
chr4 (92-156)||(22199273-22199338)
chr4 (92-164)||(23964453-23964526)
chr4 (92-156)||(24392679-24392744)
chr4 (13-58)||(24392781-24392826)
chr4 (92-156)||(36072959-36073024)
chr4 (13-58)||(37219739-37219784)
chr4 (92-156)||(46441856-46441921)
chr4 (92-156)||(47290078-47290143)
chr4 (92-156)||(53123042-53123108)
chr4 (92-138)||(17655461-17655507)
chr4 (92-156)||(4751458-4751523)
chr4 (92-129)||(9088910-9088947)
chr4 (92-156)||(24128251-24128316)
chr4 (92-156)||(36073362-36073427)
chr4 (92-156)||(42671681-42671746)
chr4 (92-129)||(44893201-44893238)
chr4 (92-129)||(44893466-44893503)
chr4 (128-168)||(53998979-53999020)
chr4 (13-57)||(33530596-33530639)
[»] chr5 (37 HSPs)
chr5 (13-169)||(4892316-4892473)
chr5 (13-169)||(3521801-3521957)
chr5 (13-168)||(33584124-33584280)
chr5 (13-168)||(6043307-6043462)
chr5 (13-168)||(8145489-8145643)
chr5 (13-169)||(25398352-25398509)
chr5 (13-169)||(37321587-37321744)
chr5 (13-169)||(14138782-14138938)
chr5 (13-165)||(12850915-12851069)
chr5 (13-167)||(3362892-3363048)
chr5 (13-168)||(2477750-2477906)
chr5 (13-168)||(38899520-38899677)
chr5 (13-147)||(11360947-11361082)
chr5 (13-126)||(4433845-4433958)
chr5 (13-168)||(22912852-22913005)
chr5 (68-169)||(12614531-12614633)
chr5 (13-137)||(31640767-31640891)
chr5 (78-169)||(17545476-17545567)
chr5 (213-276)||(1166020-1166083)
chr5 (92-164)||(8145379-8145452)
chr5 (29-168)||(27481952-27482095)
chr5 (92-156)||(12614721-12614786)
chr5 (92-156)||(22913042-22913107)
chr5 (97-156)||(10458409-10458469)
chr5 (75-131)||(13664736-13664792)
chr5 (13-55)||(17545594-17545636)
chr5 (92-156)||(2477648-2477713)
chr5 (92-164)||(3521994-3522067)
chr5 (92-156)||(6043499-6043564)
chr5 (92-156)||(11361119-11361184)
chr5 (92-137)||(17545673-17545718)
chr5 (92-137)||(31640928-31640973)
chr5 (92-156)||(3362790-3362855)
chr5 (92-156)||(4433995-4434060)
chr5 (92-156)||(4892214-4892279)
chr5 (92-156)||(25398250-25398315)
chr5 (92-156)||(38899714-38899779)
[»] chr6 (37 HSPs)
chr6 (13-168)||(17175816-17175972)
chr6 (13-169)||(33696810-33696968)
chr6 (13-168)||(18365369-18365524)
chr6 (13-168)||(18370633-18370788)
chr6 (13-169)||(17705263-17705416)
chr6 (13-169)||(28675262-28675419)
chr6 (13-168)||(33695121-33695278)
chr6 (13-169)||(32702319-32702476)
chr6 (13-168)||(2309218-2309374)
chr6 (13-157)||(6031546-6031692)
chr6 (13-169)||(23290875-23291035)
chr6 (13-137)||(18889470-18889594)
chr6 (78-166)||(11548386-11548474)
chr6 (13-127)||(6127390-6127506)
chr6 (68-169)||(29693615-29693717)
chr6 (13-100)||(9752109-9752196)
chr6 (13-58)||(25987044-25987089)
chr6 (102-167)||(34238883-34238948)
chr6 (90-168)||(582522-582602)
chr6 (13-134)||(8515556-8515677)
chr6 (114-168)||(2121004-2121059)
chr6 (13-58)||(29693552-29693597)
chr6 (92-156)||(33695315-33695380)
chr6 (92-156)||(33696708-33696773)
chr6 (92-156)||(6127287-6127352)
chr6 (92-137)||(11548576-11548621)
chr6 (92-156)||(23291072-23291137)
chr6 (102-156)||(8515723-8515778)
chr6 (102-156)||(25986942-25986997)
chr6 (92-137)||(9752233-9752278)
chr6 (13-58)||(11548495-11548539)
chr6 (92-156)||(17176009-17176074)
chr6 (92-156)||(17705453-17705518)
chr6 (92-156)||(18365561-18365626)
chr6 (92-156)||(18370825-18370890)
chr6 (92-156)||(28675160-28675225)
chr6 (92-156)||(18889685-18889749)
[»] chr2 (37 HSPs)
chr2 (13-168)||(23267857-23268013)
chr2 (13-168)||(33380321-33380477)
chr2 (13-168)||(35160871-35161029)
chr2 (13-168)||(9293370-9293527)
chr2 (13-164)||(3989190-3989342)
chr2 (13-165)||(31174633-31174785)
chr2 (13-168)||(10662001-10662158)
chr2 (13-168)||(7475303-7475459)
chr2 (24-169)||(13354972-13355119)
chr2 (78-169)||(43331092-43331183)
chr2 (24-137)||(21936207-21936321)
chr2 (68-169)||(22592880-22592984)
chr2 (13-168)||(9723519-9723677)
chr2 (68-137)||(16767288-16767357)
chr2 (78-166)||(21393483-21393570)
chr2 (78-129)||(34320991-34321042)
chr2 (92-156)||(14941354-14941419)
chr2 (78-147)||(37335824-37335894)
chr2 (13-58)||(16767378-16767423)
chr2 (92-164)||(31174822-31174895)
chr2 (123-168)||(39819272-39819317)
chr2 (14-128)||(14941199-14941317)
chr2 (92-156)||(9293564-9293629)
chr2 (92-156)||(27847644-27847709)
chr2 (93-138)||(37335744-37335789)
chr2 (13-169)||(40262530-40262687)
chr2 (92-156)||(10661899-10661964)
chr2 (92-164)||(13354850-13354923)
chr2 (13-58)||(21393594-21393639)
chr2 (92-156)||(21936093-21936158)
chr2 (92-156)||(23268050-23268115)
chr2 (13-58)||(27847746-27847791)
chr2 (92-156)||(35160769-35160834)
chr2 (92-156)||(43330924-43330989)
chr2 (13-58)||(43331026-43331071)
chr2 (92-156)||(9723417-9723482)
chr2 (104-163)||(22591487-22591547)
[»] scaffold0096 (2 HSPs)
scaffold0096 (13-168)||(41125-41280)
scaffold0096 (92-156)||(41023-41088)
[»] scaffold0228 (6 HSPs)
scaffold0228 (13-169)||(26050-26207)
scaffold0228 (13-169)||(16098-16255)
scaffold0228 (13-101)||(8516-8605)
scaffold0228 (92-156)||(8414-8479)
scaffold0228 (92-156)||(15996-16061)
scaffold0228 (92-156)||(25948-26013)
[»] scaffold0178 (2 HSPs)
scaffold0178 (13-168)||(11735-11891)
scaffold0178 (92-156)||(11633-11698)
[»] scaffold0204 (2 HSPs)
scaffold0204 (13-168)||(4510-4666)
scaffold0204 (92-156)||(4408-4473)
[»] scaffold0471 (2 HSPs)
scaffold0471 (13-166)||(12956-13110)
scaffold0471 (92-156)||(12854-12919)
[»] scaffold0041 (1 HSPs)
scaffold0041 (102-168)||(85577-85642)
[»] scaffold0665 (1 HSPs)
scaffold0665 (92-156)||(3080-3145)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 1e-62; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37986006 - 37985850
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||    
T  37986006 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgt 37985907  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37985906 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 17841801 - 17841645
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  17841801 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17841702  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  17841701 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 26042064 - 26041907
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  26042064 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26041965  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  26041964 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 40780080 - 40779923
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  40780080 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 40779981  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40779980 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 6108184 - 6108028
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  6108184 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 6108085  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  6108084 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 15187686 - 15187831
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 123  Q
    ||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15187686 ctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatt 15187785  T
Q  124 cttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  15187786 cttggatctttcttataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 1645916 - 1645758
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 1645817  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  1645816 gtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcct 1645758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 20091752 - 20091598
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  20091752 aaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 20091653  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20091652 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 34665496 - 34665649
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  |||||| ||||||||| |||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  34665496 aaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgt 34665595  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34665596 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 3596992 - 3596836
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  3596992 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 3596893  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  3596892 tgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25581190 - 25581034
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  25581190 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25581091  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25581090 tgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 38017048 - 38017201
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga-ttattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| | ||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38017147 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 42754993 - 42754837
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  42754993 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 42754894  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    | ||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  42754893 taccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  168 c 168  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 32064859 - 32065017
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||| || |||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  32064859 aaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 32064958  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  32064959 gtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  74 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 30055631 - 30055786
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||| ||||||||||||||| |||||||| |||||||||||    
T  30055631 aaaatctcag-ctggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgattattg 30055729  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  30055730 tgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 35353155 - 35353299
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||| | |||| |||||||||||||||    
T  35353155 aaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattg 35353254  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35353255 tgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 32393972 - 32394114
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  32393972 aaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 32394071  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    | |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394072 g-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 8453948 - 8454078
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8454047  T
Q  113 gccatgtcattcttgaatctttcttataaaa 143  Q
    ||||||||||||||||||  |||||||||||    
T  8454048 gccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 39772739 - 39772608
Alignment:
Q  27 gccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 125  Q
    ||||||||||||||| ||||||||||||||||          |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  39772739 gccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattct 39772640  T
Q  126 tgaatctttcttataaaatcattcttgatatc 157  Q
    || |||||||||||||||||||||||||||||    
T  39772639 tggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 31347659 - 31347570
Alignment:
Q  80 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 31347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  69 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 7022159 - 7022250
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||   |||||||| |||||||||| |||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcct 7022250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattt 165  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 30834989 - 30834849
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||||||||||||||||||||||||         || |||  || | |||| | |||||||||||| |||| ||||| || |||||||||||| ||    
T  30834989 ggaaatcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaa 30834890  T
Q  130 tctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  30834889 tctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 24844793 - 24844655
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||| |||||||||||||||||||         ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||||| ||||||| ||    
T  24844793 ggaaatcatagggtggtgggtgttatgtatttttttt-atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaa 24844695  T
Q  130 tctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  24844694 tctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 7017743 - 7017652
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||| |||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcct 7017652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 24211504 - 24211459
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  24211504 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7017816 - 7017771
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  7017816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 27782105 - 27782170
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||| |||||||  ||||||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatat 27782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 32064822 - 32064757
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 32064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 34665459 - 34665394
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 34665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30835035 - 30835107
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatt 164  Q
    ||||| || |||||||||| ||||||||||||||||||| |||   |||||||| |||||||||| |||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatatataacatt 30835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  106 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 6108221 - 6108294
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacatt 6108294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7022092 - 7022137
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||    
T  7022092 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 7022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 17841838 - 17841903
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 17841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 20091789 - 20091854
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  ||||||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 20091854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 25581227 - 25581264
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaa 25581264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 27782068 - 27782027
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgtta 54  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  27782068 aaaatcttagtctggccggaaatcattgggtggtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 27835404 - 27835288
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || | ||||||||||||| ||||||||||||||||          || |||| ||||||||||||| |||||||||| | |||||||||    
T  27835404 aaaatctcagcctagacggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattg 27835305  T
Q  112 tgccatgtcattcttga 128  Q
    || ||| ||||| ||||    
T  27835304 tgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31347770 - 31347815
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 31347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 39772789 - 39772862
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||| | |||||||  |||||||||| |||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacatt 39772862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 40780117 - 40780182
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 40780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41819729 - 41819684
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||    
T  41819729 aaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  101 ggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 3890611 - 3890649
Alignment:
Q  99 aaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 7017853 - 7017899
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttctta 7017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattt 165  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| || |||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 3597029 - 3597074
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| ||| |||||| |||||||||||||||||| |||||||    
T  3597029 aaatctaagggtaattattctgccatgtcattcttgaaactttctt 3597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8453911 - 8453846
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| ||||||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatat 8453846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10044457 - 10044502
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||| ||||| |||||||||||| ||||||| |||||||||    
T  10044457 aaaatctcaatctggtcggaaatcatggagtggtggttgttatgta 10044502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 14128941 - 14128876
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| || |||||||| ||||||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 14128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 15187637 - 15187572
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 15187572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| || |||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 26042104 - 26042169
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatat 26042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 31347733 - 31347688
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  31347733 aaaatctctgtcgggccagaaatcatggggtagtgggtgttatgta 31347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 32393935 - 32393870
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 32393870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 35353118 - 35353053
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 35353053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 37986043 - 37986108
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||| | |||||||| ||||||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 37986108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 45637826 - 45637982
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  45637826 aaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 45637925  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  45637926 gccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 24395086 - 24395241
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  24395086 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 24395185  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  24395186 gccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 3962093 - 3962249
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  3962093 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3962192  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  3962193 gccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcct 3962249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 48880878 - 48880721
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||| ||||||||||    
T  48880878 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattg 48880779  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  48880778 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 34482949 - 34483108
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||              ||||||||||||||||||||| ||||||||||||||||||    
T  34482949 aaaatctcagtctggccggaaatcatggg-tggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgatt 34483047  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34483048 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 42611925 - 42612082
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||||||||    
T  42611925 aaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattg 42612024  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  42612025 tgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 30848683 - 30848839
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||    
T  30848683 aaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattg 30848782  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  30848783 tgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 4974686 - 4974532
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  4974686 aaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 4974587  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4974586 tgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 15577799 - 15577641
Alignment:
Q  15 aatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||             || ||||||||||||||||||||||||||||||||||||||||    
T  15577799 aatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 15577700  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  15577699 gtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 15577641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 15329387 - 15329545
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |            ||||||||||||||||||||||||||||||||| |||||||||    
T  15329387 aaaatctcagactggccggaaatcatggggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattatt 15329486  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  15329487 gtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttcct 15329545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25167801 - 25167651
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||||||||||||||||| |||||||||||||          ||||||||||      ||||||||||||||||||||||||||||    
T  25167801 aaaatctcagtctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattg 25167708  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25167707 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 35445567 - 35445668
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  168 ct 169  Q
    ||    
T  35445667 ct 35445668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||| |||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  168 c 168  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 42696197 - 42696355
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||||| |||||||||| |||||||||          ||||||  |||||||||||||||||||||||| |||||||||||    
T  42696197 aaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattg 42696296  T
Q  112 tgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    | ||||||||||||||||| ||| || ||||||||||| ||||||||||||||||||||    
T  42696297 taccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 16848140 - 16848211
Alignment:
Q  206 atcatccaatttaatttgagtcaatcttaaaccccaagtaattctacataaactcgacattataaatacttg 277  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16848140 atcatccaatttaatttgagtcaatcttaaaccccaagcaattctacataaactcgacattataaatacttg 16848211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 159  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 37477031 - 37476876
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatga-aagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||            | || || |||||||||||||||||||||| |||||||||||    
T  37477031 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattg 37476932  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    |||||||||||| || ||||||||||   ||||||||||||||||||| |||||||    
T  37476931 tgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 20010049 - 20009895
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||| |||||||  |||||||||||||         || |||| ||||||||||||||| ||||||||   ||||||||||    
T  20010049 aaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgt 20009950  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    | |||||||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009949 gtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 18037092 - 18037248
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||          |   |||  |||||||| ||||||||||||| ||||||||||||    
T  18037092 aaaatctctgtcgggccagaaatcatggggtggtgggtgttatgtatttttttttttatgagaggaataaatgtgactgaaatctaagggtgattattgt 18037191  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
     ||||||||||||| ||||||||||   |||||||| |||||||||| |||||||||    
T  18037192 accatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcct 18037248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||| |||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 4974723 - 4974788
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 4974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 42611888 - 42611823
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 45637789 - 45637724
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 45637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15238496 - 15238538
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  15238496 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 15577841 - 15577903
Alignment:
Q  95 tctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||| ||| || ||||||||  || ||||||||||||||||||| ||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 15329350 - 15329285
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 15329285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 34482912 - 34482847
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatat 34482847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  104 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||| |||||||||||||||||||| || |||||| |||| ||||||| || ||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 48880915 - 48880980
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 48880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35444672 - 35444714
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||||| ||||||| |||||||||| |||||||||||||    
T  35444672 aaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||| ||| |||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 24395049 - 24394984
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||||||||||  ||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 24394984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 35444635 - 35444598
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaa 35444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 22426295 - 22426139
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||    
T  22426295 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgt 22426196  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22426195 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 22426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 30385526 - 30385670
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 123  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  124 cttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  30385626 cttgaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 19650850 - 19650695
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  19650850 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 19650751  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19650750 gtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 33113907 - 33114065
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| |||||||||||||||||||||    
T  33113907 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattatt 33114006  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33114007 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 33114065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 3137365 - 3137208
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  3137365 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 3137266  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  3137265 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 3137208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 3456178 - 3456335
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||| ||    
T  3456178 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtg 3456277  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3456278 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 3456335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 3574477 - 3574321
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||| ||||||||||||    
T  3574477 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattg 3574378  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3574377 tgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37217004 - 37216847
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || || | ||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37217004 aaaatctcagccttgctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37216905  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37216904 taccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 37216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3089531 - 3089689
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  3089531 aaaatctcagcttggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 3089630  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  3089631 tgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 6041998 - 6042148
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||| ||||||||||||||||||||| |||||| |          |||||| ||||||||||||||||||||||||||||||||||||||    
T  6041998 aaaatctcagcctgaccggaaatcatggggtggtggttgttattt------ttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgt 6042091  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  6042092 gccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 6042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 34482783 - 34482682
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  168 ct 169  Q
    ||    
T  34482683 ct 34482682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 37522167 - 37522323
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||     
T  37522167 aaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatta 37522266  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  37522267 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2754831 - 2754989
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||    
T  2754831 aaaatctcagcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattat 2754930  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  2754931 tgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 48161019 - 48161177
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| || |||||||| |||||||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||    
T  48161019 aaaatctcagcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattatt 48161118  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| |||||| |||||| || |||||||||||||||||||||||||||| |||||||||    
T  48161119 gtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttcct 48161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 47738281 - 47738382
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  167 cc 168  Q
    ||    
T  47738381 cc 47738382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 33145826 - 33145980
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||| ||| ||||||||||| ||||||          ||||||| ||||||||| |||||||||||||| |||||||||||    
T  33145826 aaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattg 33145925  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33145926 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  167 cc 168  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 36864969 - 36864826
Alignment:
Q  26 ggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 125  Q
    |||||||||||||||| ||||||||||||||||         ||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  36864969 ggccggaaatcatgggatggtgggtgttatgtattttttat-atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattct 36864871  T
Q  126 tgaatctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||| || |||||||||||||||||||||| |||||||||    
T  36864870 tgaatcttttttgataaaatcattcttgatatctagcattttcct 36864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 40328011 - 40328103
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcct 40328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 33839645 - 33839794
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||              ||||||| |||||||||||||||||||| ||| |||||||    
T  33839645 aaaatctcaatctggccgtaaatcatggggtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactgaaatttaagggtgatt 33839744  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33839745 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  167 c 167  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 8361924 - 8361833
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 8361833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  69 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttc 167  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  |||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  168 c 168  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| |||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 42297978 - 42298092
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||||||||||||||||||||||| | |||||||||         ||||||| |||||||||||||||||||||||| |||| |||||||    
T  42297978 aaaatctcagtctggccggaaatcatggggtggtagatgttatgtatttttttt-atgaaaggttaataaatgagactgaaatctaagggtggttattgt 42298076  T
Q  113 gccatgtcattcttga 128  Q
    | ||||||||||||||    
T  42298077 gtcatgtcattcttga 42298092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||| ||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 41883174 - 41883031
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||           || |||| || |||||| ||||||||||| |||| ||||||||    
T  41883174 aaaatctcagactggctagaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattatt 41883075  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttga 153  Q
     | |||||||||||||||||||||||| ||||||||||| ||||    
T  41883074 ttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9797017 - 9797090
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacatt 9797090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 30385125 - 30385170
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  30385125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 2754794 - 2754729
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2754729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3137402 - 3137467
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 3137467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3574515 - 3574580
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 3574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 6041961 - 6041896
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 6041896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8361996 - 8361951
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  8361996 aaaatctctgtcgggccggaaatcatggggtggtgggtgtcatgta 8361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 19650888 - 19650961
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||| |||| |||||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacatt 19650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 34482861 - 34482824
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggt 50  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34482861 aaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40327939 - 40327984
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||    
T  40327939 aaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 42297468 - 42297513
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  42297468 aaaatctcagcctgaccggaaatcatggggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 47738219 - 47738264
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||    
T  47738219 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 47738264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 11347382 - 11347476
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta--nnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga 105  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||           |||||| |||||||||||||| ||||||||||||||||    
T  11347382 aaaatctcagagtggctagaaatcatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 33145789 - 33145725
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| | |||||||| ||||||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatat 33145725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 9796980 - 9796935
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  9796980 aaaatctctgtcgggccgaaaatcatggggtggtgggtcttatgta 9796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 11347345 - 11347280
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| ||| |||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11347280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 22426332 - 22426405
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| |||||||||||| || ||  |||||| |||||||| ||||| |||| |||||||    
T  22426332 aaatctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacatt 22426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 37217041 - 37217106
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 37217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 41224363 - 41224392
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgta 41224392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 30385088 - 30385024
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 155  Q
    |||| ||| |||||||||| |||||||||||| |||||  |||||| |||||||| |||||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgata 30385024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 44094812 - 44094968
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  44094812 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 44094911  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    | ||||||||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  44094912 gtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcct 44094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 36966659 - 36966502
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  36966659 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 36966560  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  36966559 tgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttcct 36966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 40215102 - 40215257
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||||||||||    
T  40215102 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattg 40215201  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40215202 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 19015518 - 19015675
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  19015518 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 19015617  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||    
T  19015618 tgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 25463790 - 25463946
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||||||||    
T  25463790 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattg 25463889  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  25463890 tgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 41876393 - 41876236
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  41876393 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 41876294  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  41876293 tgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 41876236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 51737619 - 51737776
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  51737619 aaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 51737718  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  51737719 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 51737776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 6883601 - 6883757
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||     
T  6883601 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatatta 6883700  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  6883701 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 9910244 - 9910086
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |            ||||||||||||||||| || |||||||||||||||||||||    
T  9910244 aaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattat 9910145  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9910144 tgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 37821785 - 37821629
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37821785 aaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37821686  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  37821685 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 20305082 - 20304924
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||  |||||| |||||||||| ||||||||||||||||           |||||||||| ||||||||||||||||||||||||||||||||    
T  20305082 aaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgattatt 20304983  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20304982 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 20304924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3559731 - 3559887
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgtta-tgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||| |||||||||||||||    
T  3559731 aaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgattattg 3559830  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || ||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3559831 tgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 25973533 - 25973677
Alignment:
Q  23 tctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 122  Q
    |||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgtatttttttt-atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcat 25973631  T
Q  123 tcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  25973632 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 18404618 - 18404719
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  168 ct 169  Q
    ||    
T  18404718 ct 18404719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 33786516 - 33786425
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 33786425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 44690980 - 44690818
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--------atgaaagattaataaatgagactgaaatctaaaggtg 104  Q
    |||||||||||||||||||||||||||||||| |||||||||||||                 || |||||||||||||| |||||| ||||||| ||||    
T  44690980 aaaatctcagtctggccggaaatcatggggtgttgggtgttatgtatttattttttattttttataaaagattaataaataagactggaatctaagggtg 44690881  T
Q  105 attattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  44690880 attattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 27523206 - 27523049
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||         ||||||  ||||||||| ||||| ||||| || |||||||| | |    
T  27523206 aaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatct 27523107  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    |||||   ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  27523106 gccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcct 27523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 10167569 - 10167671
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||| |||  ||| |||||||||||||||| |||| |||||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  167 cct 169  Q
    |||    
T  10167669 cct 10167671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattt 165  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  96 ctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttc 167  Q
    |||| ||||| |||| || ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 16045786 - 16045851
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 16045851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 40215065 - 40215000
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 40215000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||||| ||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40273816 - 40273861
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  40273816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 40273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 131  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 18404519 - 18404454
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||||||||||||||||| | ||||||||||||| ||  |||||| |||||||| ||||||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatat 18404454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18404556 - 18404601
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||    
T  18404556 aaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 25463753 - 25463688
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatat 25463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 44094775 - 44094710
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  ||||||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 44094710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 6883564 - 6883513
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaa 143  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||| ||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaa 6883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 58
Target Start/End: Complemental strand, 32000204 - 32000173
Alignment:
Q  27 gccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||||    
T  32000204 gccggaaatcatggggtggtgggtgttatgta 32000173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33786586 - 33786543
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatg 56  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||    
T  33786586 aaaatctctgtcgggccggaaatcatggggtggtggatgttatg 33786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 9910281 - 9910346
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 9910346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 19015481 - 19015416
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| ||||||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 19015416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 32000255 - 32000320
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||| ||||| || |||||||||||||||| |||||| | |||||| ||||||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatat 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 36966696 - 36966761
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| ||||||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 36966761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 37821822 - 37821887
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| ||||||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatat 37821887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44691017 - 44691082
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatc-tttcttataaaatcattcttgatat 156  Q
    ||||||||  || |||||| |||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  44691017 aaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 22157425 - 22157333
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||| ||| |||||| |||  ||||||||| | ||||||||||||| ||||  || ||  || ||||| |||||||||| ||||||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 47964 - 48119
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| ||||||||||    
T  47964 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgt 48063  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48064 gctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 48119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 47927 - 47863
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 155  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgata 47863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 36073464 - 36073619
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  36073464 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 36073563  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  36073564 gccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 2624951 - 2625108
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 2625050  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2625051 tgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcct 2625108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 53123145 - 53123302
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  53123145 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 53123244  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  53123245 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 53123302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 7745063 - 7744906
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||| |||||||||||||| ||||||||||||||||||||||    
T  7745063 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattg 7744964  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7744963 tgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 21802273 - 21802114
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgg---gtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||         |||||||||||||||||||||||||||||||| |||||||||    
T  21802273 aaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattat 21802174  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21802173 tgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 46441958 - 46442115
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  46441958 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 46442057  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  46442058 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 46442115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 22199375 - 22199530
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  22199375 aaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 22199473  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  22199474 gccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcct 22199530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 9088984 - 9089138
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  9088984 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 9089083  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  9089084 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 47290180 - 47290337
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||||||||||||||||||||    
T  47290180 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattg 47290279  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  47290280 taccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 47290337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 49387839 - 49387681
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| || |||||||||||||||||||||| |||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  49387839 aaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 49387740  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  49387739 gtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttcct 49387681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 36073061 - 36073222
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||| ||    
T  36073061 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 36073160  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  36073161 attgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcct 36073222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 44893164 - 44893007
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  44893164 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893065  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  44893064 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 50156529 - 50156373
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||||||||||     
T  50156529 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattatta 50156431  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50156430 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 10442740 - 10442581
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaagattaa-taaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||           |  |||||||||| ||||||||||||||||||||||||||||||    
T  10442740 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattat 10442641  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10442640 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 44893540 - 44893696
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  44893540 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893639  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  44893640 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 4751560 - 4751718
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  4751560 aaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 4751659  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||    
T  4751660 gtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcct 4751718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 31078770 - 31078613
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||| |||||||||||| |||||||||    
T  31078770 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattg 31078671  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  31078670 tgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcct 31078613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 24128353 - 24128507
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  24128353 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 24128452  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    || |||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  24128453 tgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  168 c 168  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 23964416 - 23964269
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||           ||||||||||||||||||||| |||||||||||| ||||||||    
T  23964416 aaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattatt 23964317  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatct 158  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964316 atgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37934892 - 37934734
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||         ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  37934892 aaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgt 37934793  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcctc 170  Q
    | ||| ||||| ||||||||||||| ||||||||| || | ||||||||||||||||||    
T  37934792 gtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcctc 37934734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 30563323 - 30563448
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||| ||||||||| ||||||||||||||  ||||||||||    
T  30563323 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattg 30563422  T
Q  112 tgccatgtcattcttgaatctttctt 137  Q
    || |||||||||||||||||||||||    
T  30563423 tgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 37219801 - 37219903
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  167 cct 169  Q
    |||    
T  37219901 cct 37219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 17655544 - 17655699
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat--gtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||         ||||||| |||||||||||||||||||||||||||| ||||||    
T  17655544 aaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtatttttttt-atgaaaggttaataaatgagactgaaatctaaaggtaattatt 17655642  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
     || |||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  17655643 atgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 42671783 - 42671939
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||| | ||||||||||| |||||||| || |||||||||          | ||||| |||| |||||||||| ||||||||   |||||||| |    
T  42671783 aaaatctcaatttggccggaaattatggggtgatgagtgttatgtttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattat 42671882  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42671883 gtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 11314144 - 11314045
Alignment:
Q  71 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcct 169  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||||||   ||||||||||||||||||| ||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 44744554 - 44744698
Alignment:
Q  19 tcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 118  Q
    |||||||||||||||||||| |||||||||||||||||||          | | || ||||||||| |||||||||||||| | | ||||||| | ||||    
T  44744554 tcagtctggccggaaatcatagggtggtgggtgttatgtatttttttttgt-ataggttaataaataagactgaaatctaaggataattattgagtcatg 44744652  T
Q  119 tcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||||||||||||||   | ||||||||||| ||||||||||||||||||    
T  44744653 tcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 33530676 - 33530741
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatat 33530741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 10442777 - 10442842
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 10442842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 31078807 - 31078872
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 31078872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| ||||||||||| ||  |||||| ||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 49387876 - 49387941
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 49387941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 36073694 - 36073650
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgt 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  36073694 aaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 155  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 2624914 - 2624849
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatat 2624849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 7745100 - 7745165
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 7745165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 21802310 - 21802375
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  ||||||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatat 21802375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 22199338 - 22199273
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 22199273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23964453 - 23964526
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||| | |||||||| |||||||||| |||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacatt 23964526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 24392744 - 24392679
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 24392679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24392781 - 24392826
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||    
T  24392781 aaaatctctgtcgggccggaaatcatggggtgatgggtgttatgta 24392826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 36073024 - 36072959
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 36072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 37219739 - 37219784
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||    
T  37219739 aaaatctcagtctggccggaaatcattgggtgatggatgttatgta 37219784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 46441921 - 46441856
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatat 46441856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 47290143 - 47290078
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 47290078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 53123108 - 53123042
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt--ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||  | |||||| ||||||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatat 53123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 4751523 - 4751458
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 4751458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 24128316 - 24128251
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 24128251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 36073427 - 36073362
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 36073362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 42671746 - 42671681
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||| || |||||||| || |||||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatat 42671681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 44893503 - 44893466
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaa 44893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 53999020 - 53998979
Alignment:
Q  128 aatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  53999020 aatctttcttgataaaatcattcttgatatctaatattttcc 53998979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33530639 - 33530596
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgt 57  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  33530639 aaaatttcagcctggccggaaatcat-gggtggtgggtgttatgt 33530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 4892316 - 4892473
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||    
T  4892316 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 4892415  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  4892416 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 3521957 - 3521801
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  3521957 aaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3521858  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  3521857 gccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33584280 - 33584124
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  33584280 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 33584181  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33584180 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 6043462 - 6043307
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  6043462 aaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 6043363  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  6043362 gccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 8145489 - 8145643
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  8145489 aaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8145587  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8145588 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 25398352 - 25398509
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  25398352 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25398451  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||    
T  25398452 tgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcct 25398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37321744 - 37321587
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37321744 aaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37321645  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  37321644 tgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 14138782 - 14138938
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||    
T  14138782 aaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgt 14138881  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  14138882 gccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 12850915 - 12851069
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  12850915 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 12851014  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattt 165  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  12851015 gtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 3362892 - 3363048
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  3362892 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 3362991  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    ||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  3362992 gtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2477750 - 2477906
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||| ||||    
T  2477750 aaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattg 2477849  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||    
T  2477850 tgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 38899677 - 38899520
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||| ||||||    
T  38899677 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattg 38899578  T
Q  112 tgccatgtcattcttgaa-tctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||    
T  38899577 tgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 11361082 - 11360947
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||| |||||||||||| |||||||||    
T  11361082 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattg 11360983  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  11360982 tgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 4433958 - 4433845
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||| |||||||||||||||||||||||||||    
T  4433958 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgt 4433859  T
Q  113 gccatgtcattctt 126  Q
    ||||||||||||||    
T  4433858 gccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 22913005 - 22912852
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||| ||| |||| |||||||||||||||||| |||||||||         |||| |||  |||||||||||||||||||||| ||||||||||||    
T  22913005 aaaatctctgtcgggccagaaatcatggggtggtggatgttatgtatttttttttatgagaga--aataaatgagactgaaatctaagggtgattattgt 22912908  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||||||||||   ||||||||||||||||||| ||||||||    
T  22912907 gccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||| ||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  167 cct 169  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 31640891 - 31640767
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         ||||||| ||||||||| |||    |||||||||  ||||||| |    
T  31640891 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattct 31640792  T
Q  113 gccatgtcattcttgaatctttctt 137  Q
    |||||||||||||||||||||||||    
T  31640791 gccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   ||||||||||||||||||| |||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 1166020 - 1166083
Alignment:
Q  213 aatttaatttgagtcaatcttaaaccccaagtaattctacataaactcgacattataaatactt 276  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||    
T  1166020 aatttaatttgagtcaatcttaaatctcaagtaattctacatagactcgacactataaatactt 1166083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 8145452 - 8145379
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 27481952 - 27482095
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaa-tctaaaggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||||||||||          || |||| ||||||||| ||| | ||| |||||||||||||||| ||  |||||||||||    
T  27481952 cggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattctt 27482051  T
Q  127 gaatctttctt-ataaaatcattc-ttgatatctaacattttcc 168  Q
    |||||||| || |||||||||||| || |||||||| |||||||    
T  27482052 gaatcttttttgataaaatcattctttaatatctaatattttcc 27482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 12614721 - 12614786
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||  ||||||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatat 12614786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 22913042 - 22913107
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatat 22913107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  97 taaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  75 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 131  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 17545636 - 17545594
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  17545636 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 2477713 - 2477648
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 2477648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3521994 - 3522067
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| |||||||||||| |||||  |||||| | |||||| |||||||||| |||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacatt 3522067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 6043499 - 6043564
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| |||||||| ||||||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatat 6043564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 11361119 - 11361184
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 11361184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 3362855 - 3362790
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 3362790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 4433995 - 4434060
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| ||||||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatat 4434060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 4892279 - 4892214
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4892214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 25398315 - 25398250
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 25398250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 38899714 - 38899779
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatat 38899779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 17175972 - 17175816
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  17175972 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17175873  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17175872 taccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 33696810 - 33696968
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  33696810 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33696909  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  33696910 gtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcct 33696968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 18365524 - 18365369
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18365524 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18365425  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18365424 gctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 18370788 - 18370633
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18370788 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18370689  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18370688 gctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 17705416 - 17705263
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  17705416 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt--atgaaaggttaataaatgagactgaaatctaa-ggtgattattgt 17705320  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17705319 gtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 17705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 28675262 - 28675419
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  28675262 aaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattg 28675361  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28675362 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 28675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33695278 - 33695121
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  33695278 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33695179  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||| ||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  33695178 gtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 32702319 - 32702476
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  32702319 aaaatctgagtctagccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 32702418  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    || |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  32702419 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 32702476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 2309374 - 2309218
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  2309374 aaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 2309275  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  2309274 tgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 13 - 157
Target Start/End: Complemental strand, 6031692 - 6031546
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||           || ||||||||||||||||||||||||||||||||||||||||    
T  6031692 aaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 6031593  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatc 157  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6031592 gtgccatgtcattcttaaatcttttttataaaatcattcttgatatc 6031546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 23291035 - 23290875
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgatta 108  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||             |||||||||||||||||||||||||||||||||||| ||||    
T  23291035 aaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaatta 23290936  T
Q  109 ttgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  23290935 ttgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcct 23290875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 18889594 - 18889470
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18889594 aaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18889495  T
Q  113 gccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| |||||    
T  18889494 gccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||| ||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 6127390 - 6127506
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||         ||  ||||||||||||||||||||||||||||||| |||||||||    
T  6127390 aaaatatcagtttggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattatt 6127489  T
Q  111 gtgccatgtcattcttg 127  Q
    |||||||||||||||||    
T  6127490 gtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 29693615 - 29693717
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatttt 166  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  167 cct 169  Q
    |||    
T  29693715 cct 29693717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 9752196 - 9752109
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaa 100  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||         ||||||| |||||||||||||||||||||||||    
T  9752196 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 25987044 - 25987089
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25987044 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 167  Q
    |||||||||||| |||||||||||||||||||  | |||||||||||||||||||||| |||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  90 tgaaatctaaaggtgattattgtgcc-atgtcattcttgaatctttctta-taaaatcattcttgatatctaacattttcc 168  Q
    |||||||||| |||||||||| |||| || |||||||| ||| ||||||| ||||||||||||||||||||||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 8515677 - 8515556
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||         ||||||  ||||||||| ||||||||||||||  ||||||||| |    
T  8515677 aaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattct 8515578  T
Q  113 gccatgtcattcttgaatcttt 134  Q
     |||||||||| || |||||||    
T  8515577 accatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  114 ccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29693552 - 29693597
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||    
T  29693552 aaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 33695315 - 33695380
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 33696773 - 33696708
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 33696708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 6127352 - 6127287
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 6127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 11548576 - 11548621
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 11548621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 23291072 - 23291137
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 23291137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 8515723 - 8515778
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||||| ||||||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatat 8515778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 25986997 - 25986942
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatat 25986942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| |||||| |||||||||||| ||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 11548539 - 11548495
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||    
T  11548539 aaaatctctgtcgggccggaaatcatggggt-gtgggtgttatgta 11548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 17176009 - 17176074
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  ||| || |||||||| ||||||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatat 17176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 17705453 - 17705518
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| ||||||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatat 17705518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 18365561 - 18365626
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||| | |||||||| ||||||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18365626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 18370825 - 18370890
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||| | |||||||| ||||||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 18370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 28675225 - 28675160
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| ||||||||||  | |||||||||||||||  |||||| |||||||| ||||||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatat 28675160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 18889685 - 18889749
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    |||||||| ||| |||||| ||||||||||||||||||  ||||||   ||||| ||||||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatat 18889749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 23268013 - 23267857
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  23268013 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 23267914  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  23267913 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 33380321 - 33380477
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||    
T  33380321 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 33380420  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33380421 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 35160871 - 35161029
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  35160871 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 35160970  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  35160971 tgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 9293527 - 9293370
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||    
T  9293527 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattatt 9293428  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9293427 gtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 3989190 - 3989342
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  3989190 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattg 3989289  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatt 164  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  3989290 tgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 31174785 - 31174633
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||| | |||||||    
T  31174785 aaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgt 31174686  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattt 165  Q
    | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31174685 gtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 10662001 - 10662158
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  10662001 aaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 10662100  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  10662101 gtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 7475459 - 7475303
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||     
T  7475459 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatta 7475360  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    || ||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  7475359 tgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 13354972 - 13355119
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 121  Q
    ||||||||||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13354972 ctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtca 13355071  T
Q  122 ttcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13355072 ttcttggatctttcttataaaatcattcttgatatctagcattttcct 13355119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||||||| |||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 21936207 - 21936321
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 122  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21936207 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcat 21936306  T
Q  123 tcttgaatctttctt 137  Q
    ||||| ||| |||||    
T  21936307 tcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 22592880 - 22592984
Alignment:
Q  68 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  165 ttcct 169  Q
    |||||    
T  22592980 ttcct 22592984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 9723519 - 9723677
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||           ||||||  | ||||||| |||||||||||||||||||||||||    
T  9723519 aaaatctcagcctcaccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattatt 9723618  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 168  Q
     || |||||||||||| ||| |||||| || ||||||||||||||||||||||||||||    
T  9723619 ctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||| ||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 34321042 - 34320991
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaa 34320991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 14941354 - 14941419
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatat 14941419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcat 147  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 16767423 - 16767378
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  16767423 aaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31174822 - 31174895
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacatt 31174895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  123 tcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 14941317 - 14941199
Alignment:
Q  14 aaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||             ||||||| ||||||||| ||| |||||||||| | |||||||    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattat 14941218  T
Q  110 tgtgccatgtcattcttga 128  Q
    |||| ||||||||||||||    
T  14941217 tgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 9293564 - 9293629
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatat 9293629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  93 aatctaaaggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 40262687 - 40262530
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  ||| |||||||| ||||||||||||||||||||||          ||||||  |||| |||| | ||||||||||||  || ||||||     
T  40262687 aaaatctcaccctgaccggaaattatggggtggtgggtgttatgtatttattttttatgaaacgttaacaaataaaactgaaatctaagagttattattc 40262588  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    | ||||||||||||||||||  || |  |||  ||||||||||||||| |||||||||    
T  40262587 taccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcattttcct 40262530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 10661964 - 10661899
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 10661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 13354923 - 13354850
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 164  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacatt 13354850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 21393639 - 21393594
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||    
T  21393639 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 21393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 21936158 - 21936093
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 21936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 23268050 - 23268115
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 23268115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27847746 - 27847791
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||    
T  27847746 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 35160834 - 35160769
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatat 35160769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 43330989 - 43330924
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| || | |||||| ||||||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatat 43330924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 43331026 - 43331071
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||    
T  43331026 aaaatttctgtcgggccggaaatcatggggtggtgggtgttatgta 43331071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 9723482 - 9723417
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| || |||||||||||| |||||||||| |||||||| ||||| ||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatat 9723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 163
Target Start/End: Complemental strand, 22591547 - 22591487
Alignment:
Q  104 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacat 163  Q
    ||||||| |||||| |||||||||||| ||| || |||||||| |||||||||| ||||||    
T  22591547 gattattctgccatatcattcttgaattttttttaataaaatctttcttgatatttaacat 22591487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 41125 - 41280
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  41125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 41224  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
     |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  41225 accatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 41280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 41088 - 41023
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||| | |||||||| ||||||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatat 41023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 26050 - 26207
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  26050 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26149  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  26150 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 26207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 16098 - 16255
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  16098 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattg 16197  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  16198 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 16255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 8516 - 8605
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 101  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8516 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 11735 - 11891
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  11735 aaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 11834  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  11835 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 11698 - 11633
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatat 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 4510 - 4666
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  4510 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 4609  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  4610 tgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 4666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 4473 - 4408
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 12956 - 13110
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  12956 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 13055  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacatttt 166  Q
    || |||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  13056 tgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 12919 - 12854
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| ||||||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatat 12854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 168  Q
    |||||||||||||||||| ||| || ||||||||  || ||||||||||||||||||| ||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 3145 - 3080
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| || |||||||| ||||||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatat 3080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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