View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13925_low_11 (Length: 435)

Name: NF13925_low_11
Description: NF13925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13925_low_11
NF13925_low_11
[»] chr8 (39 HSPs)
chr8 (200-412)||(6869131-6869334)
chr8 (17-112)||(6868907-6869002)
chr8 (205-389)||(44308267-44308441)
chr8 (205-389)||(25630337-25630509)
chr8 (207-386)||(25981-26150)
chr8 (296-389)||(15565376-15565469)
chr8 (296-389)||(20831954-20832047)
chr8 (296-389)||(12502328-12502421)
chr8 (205-348)||(26716-26849)
chr8 (306-356)||(15730744-15730794)
chr8 (203-343)||(12502986-12503114)
chr8 (204-348)||(25631063-25631195)
chr8 (205-256)||(27072506-27072557)
chr8 (205-246)||(37746459-37746500)
chr8 (205-257)||(12383237-12383289)
chr8 (296-348)||(20832603-20832655)
chr8 (205-256)||(3416827-3416878)
chr8 (296-343)||(9879064-9879111)
chr8 (296-343)||(25094372-25094419)
chr8 (213-256)||(27071746-27071789)
chr8 (205-256)||(38714695-38714746)
chr8 (205-255)||(31820464-31820514)
chr8 (205-255)||(36251979-36252029)
chr8 (153-190)||(15601322-15601359)
chr8 (205-246)||(39864105-39864146)
chr8 (205-257)||(1588011-1588063)
chr8 (154-190)||(3416762-3416798)
chr8 (205-257)||(3927635-3927687)
chr8 (205-257)||(7723287-7723339)
chr8 (209-256)||(9263840-9263887)
chr8 (205-257)||(15207605-15207657)
chr8 (205-257)||(15211426-15211478)
chr8 (296-348)||(15564762-15564814)
chr8 (205-257)||(23916056-23916108)
chr8 (205-257)||(35942668-35942720)
chr8 (154-190)||(36573632-36573668)
chr8 (205-257)||(39324623-39324675)
chr8 (205-257)||(39407726-39407778)
chr8 (205-257)||(43085623-43085675)
[»] chr1 (59 HSPs)
chr1 (205-389)||(25376892-25377064)
chr1 (205-389)||(39364998-39365173)
chr1 (207-389)||(29487446-29487619)
chr1 (205-412)||(48731358-48731557)
chr1 (296-389)||(16835217-16835310)
chr1 (296-389)||(42774959-42775052)
chr1 (296-389)||(44431426-44431519)
chr1 (296-389)||(1799554-1799647)
chr1 (205-386)||(21247302-21247473)
chr1 (205-389)||(16798011-16798186)
chr1 (296-386)||(46295280-46295370)
chr1 (205-348)||(23703639-23703771)
chr1 (205-339)||(40315396-40315521)
chr1 (205-255)||(40116841-40116891)
chr1 (313-371)||(45141727-45141785)
chr1 (205-348)||(46294600-46294733)
chr1 (296-348)||(1799006-1799058)
chr1 (296-348)||(44432080-44432132)
chr1 (207-348)||(16834528-16834657)
chr1 (205-255)||(26615691-26615741)
chr1 (205-255)||(27235053-27235103)
chr1 (205-255)||(42233528-42233578)
chr1 (306-371)||(18806874-18806939)
chr1 (203-255)||(8897557-8897609)
chr1 (296-348)||(19076195-19076247)
chr1 (296-348)||(19124085-19124137)
chr1 (296-348)||(21246691-21246743)
chr1 (296-348)||(23703263-23703315)
chr1 (205-256)||(9033728-9033779)
chr1 (205-256)||(13698213-13698264)
chr1 (205-256)||(21246612-21246663)
chr1 (205-256)||(26537666-26537717)
chr1 (296-343)||(27234652-27234699)
chr1 (205-256)||(32814966-32815017)
chr1 (205-256)||(38623725-38623776)
chr1 (205-255)||(1799678-1799728)
chr1 (207-257)||(6918703-6918753)
chr1 (296-334)||(11202031-11202069)
chr1 (205-255)||(27134431-27134481)
chr1 (205-255)||(35156051-35156101)
chr1 (205-255)||(43281948-43281998)
chr1 (205-255)||(48720931-48720981)
chr1 (153-190)||(13534058-13534095)
chr1 (203-256)||(16797296-16797348)
chr1 (154-190)||(22388431-22388467)
chr1 (205-257)||(22775600-22775652)
chr1 (205-257)||(24982807-24982859)
chr1 (203-255)||(28297195-28297247)
chr1 (205-257)||(30634457-30634508)
chr1 (154-190)||(31058645-31058681)
chr1 (205-257)||(31675547-31675599)
chr1 (205-257)||(32832315-32832367)
chr1 (205-257)||(38457237-38457289)
chr1 (154-190)||(40116922-40116958)
chr1 (154-190)||(40315550-40315586)
chr1 (203-255)||(48803524-48803576)
chr1 (205-253)||(49216873-49216921)
chr1 (205-257)||(51000912-51000964)
chr1 (205-257)||(52360209-52360261)
[»] chr5 (40 HSPs)
chr5 (205-389)||(6915203-6915376)
chr5 (205-389)||(17648138-17648312)
chr5 (296-390)||(24087260-24087354)
chr5 (205-389)||(5574125-5574298)
chr5 (207-371)||(19293021-19293176)
chr5 (207-256)||(6914288-6914337)
chr5 (207-348)||(17647448-17647579)
chr5 (205-256)||(6809375-6809426)
chr5 (306-371)||(5577166-5577231)
chr5 (296-348)||(5574856-5574908)
chr5 (296-343)||(26359676-26359723)
chr5 (205-255)||(13545310-13545360)
chr5 (201-255)||(14196026-14196080)
chr5 (205-255)||(38424853-38424903)
chr5 (206-255)||(20731020-20731069)
chr5 (207-256)||(34217197-34217246)
chr5 (205-256)||(2301298-2301349)
chr5 (209-256)||(14197887-14197934)
chr5 (205-256)||(25751867-25751918)
chr5 (205-256)||(38090488-38090539)
chr5 (205-256)||(38977720-38977771)
chr5 (205-255)||(7950949-7950999)
chr5 (205-243)||(21360679-21360717)
chr5 (203-256)||(5574938-5574991)
chr5 (207-256)||(38424264-38424313)
chr5 (205-257)||(1829562-1829614)
chr5 (205-257)||(4844324-4844376)
chr5 (205-257)||(4911952-4912004)
chr5 (205-257)||(6166541-6166593)
chr5 (203-255)||(6835269-6835321)
chr5 (205-257)||(6845606-6845658)
chr5 (296-348)||(26359380-26359432)
chr5 (205-257)||(32272522-32272574)
chr5 (296-336)||(37895848-37895888)
chr5 (205-257)||(38465261-38465313)
chr5 (203-255)||(38978317-38978369)
chr5 (205-257)||(39760731-39760783)
chr5 (205-257)||(40195391-40195443)
chr5 (205-257)||(40315029-40315081)
chr5 (154-190)||(42546280-42546316)
[»] chr2 (35 HSPs)
chr2 (205-412)||(3106807-3107004)
chr2 (205-389)||(9708733-9708906)
chr2 (296-389)||(36207211-36207306)
chr2 (296-389)||(15830704-15830797)
chr2 (319-389)||(38937620-38937690)
chr2 (194-255)||(7337927-7337988)
chr2 (205-348)||(9708030-9708163)
chr2 (205-253)||(21545253-21545301)
chr2 (296-348)||(36207853-36207905)
chr2 (206-256)||(3106311-3106361)
chr2 (205-255)||(38935880-38935930)
chr2 (203-256)||(35059111-35059164)
chr2 (203-255)||(20463574-20463626)
chr2 (205-256)||(12138646-12138697)
chr2 (209-256)||(36207136-36207183)
chr2 (194-256)||(4646935-4646997)
chr2 (203-257)||(5440254-5440308)
chr2 (205-255)||(18060409-18060459)
chr2 (194-256)||(20207178-20207240)
chr2 (205-255)||(23849110-23849160)
chr2 (203-257)||(32892760-32892814)
chr2 (207-255)||(36207936-36207984)
chr2 (202-255)||(39500425-39500478)
chr2 (205-254)||(41425575-41425624)
chr2 (205-257)||(3074871-3074923)
chr2 (154-190)||(6730507-6730543)
chr2 (207-255)||(7275514-7275562)
chr2 (345-389)||(7278055-7278099)
chr2 (205-257)||(8345925-8345977)
chr2 (296-340)||(15830092-15830136)
chr2 (154-190)||(20207123-20207159)
chr2 (205-257)||(33008378-33008429)
chr2 (205-257)||(36566371-36566423)
chr2 (203-255)||(38939147-38939199)
chr2 (205-257)||(40598581-40598633)
[»] chr4 (50 HSPs)
chr4 (297-389)||(48083185-48083277)
chr4 (296-389)||(6336822-6336915)
chr4 (203-385)||(42260071-42260244)
chr4 (296-389)||(56443368-56443461)
chr4 (205-389)||(1613607-1613781)
chr4 (296-389)||(55082676-55082769)
chr4 (206-371)||(17215097-17215249)
chr4 (203-256)||(23590636-23590689)
chr4 (210-348)||(42259445-42259572)
chr4 (205-348)||(36112039-36112173)
chr4 (306-371)||(39334197-39334262)
chr4 (203-255)||(25705986-25706038)
chr4 (205-257)||(52177264-52177316)
chr4 (205-347)||(12800372-12800509)
chr4 (205-348)||(56444020-56444152)
chr4 (206-255)||(15739577-15739626)
chr4 (202-255)||(23395984-23396037)
chr4 (204-256)||(55778129-55778181)
chr4 (204-256)||(55842309-55842361)
chr4 (205-256)||(25705424-25705475)
chr4 (205-255)||(220720-220770)
chr4 (205-255)||(1614816-1614866)
chr4 (205-255)||(36111639-36111689)
chr4 (296-340)||(1614741-1614785)
chr4 (203-255)||(7862817-7862869)
chr4 (205-257)||(23465770-23465822)
chr4 (205-257)||(47838111-47838163)
chr4 (205-256)||(12594734-12594785)
chr4 (205-256)||(23161257-23161308)
chr4 (205-256)||(38575702-38575752)
chr4 (205-256)||(40220745-40220796)
chr4 (205-256)||(55083383-55083434)
chr4 (202-256)||(4940990-4941044)
chr4 (205-255)||(29860092-29860142)
chr4 (205-255)||(29860954-29861004)
chr4 (205-255)||(31559192-31559242)
chr4 (205-255)||(40145806-40145856)
chr4 (203-256)||(21857769-21857822)
chr4 (203-256)||(21913632-21913685)
chr4 (205-254)||(56473658-56473707)
chr4 (205-257)||(6528349-6528401)
chr4 (154-190)||(12594668-12594704)
chr4 (205-257)||(17971600-17971652)
chr4 (205-257)||(24318552-24318604)
chr4 (205-257)||(27716187-27716238)
chr4 (154-190)||(32465563-32465599)
chr4 (205-257)||(34476699-34476751)
chr4 (205-257)||(40131176-40131228)
chr4 (154-190)||(42260273-42260309)
chr4 (207-255)||(48799822-48799870)
[»] chr7 (42 HSPs)
chr7 (205-389)||(26831690-26831864)
chr7 (205-389)||(26928233-26928408)
chr7 (296-389)||(36897634-36897727)
chr7 (308-389)||(14103670-14103751)
chr7 (308-389)||(14413687-14413768)
chr7 (305-389)||(15752471-15752555)
chr7 (205-371)||(29417916-29418072)
chr7 (306-371)||(17774540-17774605)
chr7 (296-348)||(14103059-14103111)
chr7 (296-348)||(14413076-14413128)
chr7 (306-374)||(42260930-42260998)
chr7 (203-255)||(44157614-44157666)
chr7 (209-256)||(15752388-15752435)
chr7 (205-255)||(33227828-33227878)
chr7 (205-255)||(34959043-34959093)
chr7 (205-257)||(2755909-2755961)
chr7 (296-348)||(15753123-15753175)
chr7 (203-255)||(18829221-18829273)
chr7 (205-256)||(23678763-23678814)
chr7 (205-256)||(31308399-31308449)
chr7 (358-389)||(42261055-42261086)
chr7 (205-256)||(43759649-43759700)
chr7 (205-255)||(16083143-16083193)
chr7 (205-255)||(17774451-17774501)
chr7 (210-256)||(24213264-24213310)
chr7 (205-255)||(33210420-33210470)
chr7 (194-255)||(5198379-5198440)
chr7 (205-246)||(21125574-21125615)
chr7 (153-190)||(30023221-30023258)
chr7 (210-255)||(34345846-34345891)
chr7 (203-256)||(48343727-48343780)
chr7 (205-257)||(1730136-1730188)
chr7 (205-257)||(7337326-7337378)
chr7 (205-257)||(8641061-8641113)
chr7 (205-257)||(17272446-17272498)
chr7 (205-257)||(21176621-21176673)
chr7 (203-255)||(31309290-31309342)
chr7 (203-255)||(33697231-33697283)
chr7 (205-257)||(38354133-38354185)
chr7 (296-348)||(44950525-44950576)
chr7 (205-257)||(46100288-46100340)
chr7 (205-257)||(48936317-48936369)
[»] scaffold0132 (2 HSPs)
scaffold0132 (296-389)||(42230-42323)
scaffold0132 (207-255)||(42354-42402)
[»] chr3 (50 HSPs)
chr3 (205-389)||(1092173-1092346)
chr3 (205-389)||(32751538-32751712)
chr3 (296-389)||(24782935-24783028)
chr3 (296-389)||(54627876-54627969)
chr3 (210-387)||(35233904-35234072)
chr3 (296-389)||(20819462-20819555)
chr3 (296-389)||(40066341-40066434)
chr3 (194-389)||(54492867-54493050)
chr3 (296-389)||(35235083-35235176)
chr3 (194-389)||(54602977-54603162)
chr3 (337-412)||(41221894-41221969)
chr3 (205-348)||(32750843-32750978)
chr3 (205-371)||(40791513-40791669)
chr3 (296-372)||(20410995-20411071)
chr3 (296-348)||(35235735-35235787)
chr3 (296-344)||(46650973-46651021)
chr3 (205-256)||(24782248-24782299)
chr3 (205-256)||(55481499-55481550)
chr3 (296-348)||(35234608-35234660)
chr3 (296-348)||(54627266-54627318)
chr3 (205-256)||(29588948-29588998)
chr3 (205-256)||(40009470-40009521)
chr3 (205-256)||(55482245-55482296)
chr3 (205-255)||(33128573-33128623)
chr3 (207-257)||(44405259-44405309)
chr3 (207-255)||(8015516-8015564)
chr3 (296-348)||(24782317-24782369)
chr3 (205-257)||(43727186-43727238)
chr3 (205-256)||(40065648-40065699)
chr3 (205-256)||(50672499-50672550)
chr3 (203-257)||(19238371-19238425)
chr3 (205-255)||(35235002-35235052)
chr3 (205-255)||(40066465-40066515)
chr3 (205-255)||(46651053-46651103)
chr3 (207-257)||(49223377-49223426)
chr3 (206-256)||(54602288-54602338)
chr3 (305-343)||(55482169-55482207)
chr3 (203-256)||(14899341-14899394)
chr3 (206-255)||(24783057-24783106)
chr3 (203-256)||(37332757-37332810)
chr3 (203-255)||(20819379-20819431)
chr3 (296-348)||(20820117-20820169)
chr3 (205-257)||(23908510-23908562)
chr3 (205-257)||(35154053-35154105)
chr3 (205-257)||(36260032-36260084)
chr3 (203-255)||(43914601-43914653)
chr3 (205-257)||(49255811-49255863)
chr3 (296-348)||(50672419-50672471)
chr3 (205-257)||(53628112-53628164)
chr3 (308-348)||(54602378-54602418)
[»] chr6 (14 HSPs)
chr6 (296-383)||(28538051-28538138)
chr6 (296-389)||(11099745-11099838)
chr6 (305-389)||(1563756-1563840)
chr6 (205-371)||(23075118-23075272)
chr6 (209-256)||(1563876-1563923)
chr6 (205-256)||(6138253-6138304)
chr6 (296-348)||(1563136-1563188)
chr6 (205-257)||(25404239-25404291)
chr6 (296-348)||(28537766-28537818)
chr6 (205-256)||(28537685-28537736)
chr6 (205-257)||(749286-749338)
chr6 (205-257)||(1050005-1050057)
chr6 (205-257)||(23066800-23066852)
chr6 (205-257)||(26610319-26610371)
[»] scaffold0340 (2 HSPs)
scaffold0340 (207-389)||(1467-1639)
scaffold0340 (296-348)||(2190-2242)
[»] scaffold0096 (1 HSPs)
scaffold0096 (203-255)||(34947-34999)
[»] scaffold0113 (2 HSPs)
scaffold0113 (296-348)||(12716-12768)
scaffold0113 (154-190)||(12558-12594)
[»] scaffold0083 (1 HSPs)
scaffold0083 (205-256)||(3387-3438)
[»] scaffold0945 (1 HSPs)
scaffold0945 (205-255)||(2102-2152)
[»] scaffold0060 (2 HSPs)
scaffold0060 (205-255)||(46668-46718)
scaffold0060 (205-255)||(67224-67274)
[»] scaffold0095 (1 HSPs)
scaffold0095 (205-257)||(52377-52429)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 8e-65; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 200 - 412
Target Start/End: Original strand, 6869131 - 6869334
Alignment:
Q  200 tttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttat 299  Q
    |||| |||||||||||||||||||||||||||       ||||| |||||||||||||        |||||| || ||||||||||||||||||||||||    
T  6869131 tttcctgaagttttgcacttatgttcaaaatg-------aacttaaaaatttatattatttttt--cttatctttaaaagtgactgcattatcaatttat 6869221  T
Q  300 cacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagaggcacttacat 399  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6869222 cactgaattgtggagcatgttagctaaattttgacggtatacaatcatatatgttccatgaaacgatcaaacattaactatgtattagaggcacttacat 6869321  T
Q  400 tattgtttgttta 412  Q
    |||||||||||||    
T  6869322 tattgtttgttta 6869334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 6868907 - 6869002
Alignment:
Q  17 agaatttgcagttaaactatctccgacgagtatataaacttattctttcttgtaatatatagggtgatattttaaaaaggatgaaatatgcaatta 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  6868907 agaatttgcagttaaactatctccgacgagtatataaacttattctttcttgtaatatacagggtgatattttaaaaaggaggaaatatgcaatta 6869002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 44308267 - 44308441
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| | |||||||||||||||||||||          ||||||||| ||||||| ||||||||||        ||     
T  44308267 tgaagttttgtacttatgtgcaaaatgccccttgaacttgaaaatttatat--atttttttcttatccttaaaagtgattgcattatca--------ctg 44308356  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  44308357 aattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 44308441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 25630337 - 25630509
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||||         ||||||||| |||||||||||||||||| |             
T  25630337 tgaagttttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatatt----tttttcttatccttaaaagtgactgcattatcattg-------- 25630424  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||| ||||||||||||||||||||| |||| ||| ||| |||| |||||||||||||||||||||||||||    
T  25630425 aattgtggagcatattaactaagttttgacggtatacaaccatatatgctccctgaagcgatcaaacattaaccatgtattagag 25630509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 207 - 386
Target Start/End: Original strand, 25981 - 26150
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    |||||||| |||||||| ||||||| | | |||||||||||||||||||          ||||||||| ||||||||||||||||||        || ||    
T  25981 aagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------ctgaa 26070  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtatta 386  Q
    ||||||||||| |||||||||||||||||||| |||| |||| ||||||| | |||||||||||||||||||||||||||    
T  26071 ttgtggagcatattagctaagttttgacggtacacaaccatatatgttcctttaaacgatcaaacattaaccatgtatta 26150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 15565469 - 15565376
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||| |||| ||||||| | |||||||||||| |||||||||||||||||    
T  15565469 ttatcactgaattgtagagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacgttaaccatgtattagag 15565376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 20831954 - 20832047
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||  | ||||||| |||||||||  |||||||||||    
T  20831954 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcatttaaacgataaaacattaaaaatgtattagag 20832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 12502328 - 12502421
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| |||||| |||||| ||||||||| ||  ||| ||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||    
T  12502328 ttatcactgaattgtagagcatattagctaagcttctacgatatacaaccatatatgttccctgaaacgatcaaacattaaccatatattagag 12502421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 26849 - 26716
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||||| | | ||||||||||||||||||         ||||||||| ||||||| ||||        ||||||||     
T  26849 tgaagttttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatatt--ttgttttcttatccttaaaagtgattgca--------ttatcactg 26760  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||||| ||||||||||||||| | ||||||| ||||    
T  26759 aattgtggagcatattagctaagttttgatgatatacaaccata 26716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 356
Target Start/End: Original strand, 15730744 - 15730794
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttcc 356  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  15730744 attgtgaagcatattagctaagttttgacggtatacaatcatatatgttcc 15730794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 343
Target Start/End: Complemental strand, 12503114 - 12502986
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcac 302  Q
    |||||||||||||||||||||  ||||||  || ||||||||||||||||||||         ||||||||| ||| ||||||||        ||||||     
T  12503114 cttgaagttttgcacttatgtgtaaaatgcatcctgaacttgaaaatttatatt----tttttcttatccttaaaaatgactgca--------ttatcag 12503027  T
Q  303 ttaattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    | ||||||||||||| |||||||||||||| ||||||||||    
T  12503026 tgaattgtggagcatattagctaagttttgtcggtatacaa 12502986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 348
Target Start/End: Complemental strand, 25631195 - 25631063
Alignment:
Q  204 ttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcact 303  Q
    ||||| |||||||||||||| ||||||| | | ||||||||||||||||||||         ||||||||| ||||| ||||||||||||        ||    
T  25631195 ttgaaattttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt----tttttcttatccttaaaagttactgcattatca--------ct 25631108  T
Q  304 taattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
     |||| | |||||| ||||||||||||||||||||||||| ||||    
T  25631107 gaattctagagcatattagctaagttttgacggtatacaagcata 25631063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 27072557 - 27072506
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||||||||||| |  |||||||||| ||||||||    
T  27072557 tgaagttttgcacttatgttcaaaatgtcccccgaacttgaaattttatatt 27072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 37746459 - 37746500
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaa 246  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  37746459 tgaagttttgcacttatgtgcaaaatgtcccttgaacttgaa 37746500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 12383237 - 12383289
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||||||||||| |||   ||||| |||||||||||||    
T  12383237 tgaagttttgcacttatgttcaaaatgactcccaaacttaaaaatttatatta 12383289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 20832655 - 20832603
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||| |||||||| ||||||||||||||||| ||||||| ||||    
T  20832655 ttatcactgaattatggagcatattagctaagttttgacgatatacaaccata 20832603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 3416827 - 3416878
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||||  |  |||||||||||||||||||    
T  3416827 tgaagttttgcacttatgtgcaaaatgttccccgaacttgaaaatttatatt 3416878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 9879111 - 9879064
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    |||||||| ||||||||||||| |||||||| |||||||| |||||||    
T  9879111 ttatcactgaattgtggagcatattagctaaattttgacgatatacaa 9879064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 25094372 - 25094419
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    |||||||| ||||||||||||| ||| ||||||||||||| |||||||    
T  25094372 ttatcactgaattgtggagcatattaactaagttttgacgatatacaa 25094419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 27071746 - 27071789
Alignment:
Q  213 tgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||    
T  27071746 tgcacttatgttcaaaatgccccttgaacttaaaaatttatatt 27071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 38714746 - 38714695
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||| |||  |||||||||||||||||||    
T  38714746 tgaaattttgcacttatgtgcaaaatgcctcccgaacttgaaaatttatatt 38714695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 31820514 - 31820464
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||||| | ||||||| |||||||||||    
T  31820514 tgaagttttccacttatgtgcaaaatgtcccctgaactttaaaatttatat 31820464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 36251979 - 36252029
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||||||| | ||||| |||||||||||    
T  36251979 tgaaattttgcacttatgtgcaaaatgtctcctaaacttaaaaatttatat 36252029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 15601322 - 15601359
Alignment:
Q  153 attaattaatttaccctctccgtcaaattcttatgtta 190  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  15601322 attaatcaatttaccccctccgtcaaattcttatgtta 15601359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 39864146 - 39864105
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaa 246  Q
    ||||||||||||||||||| ||||||| | ||||||||||||    
T  39864146 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaa 39864105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 1588011 - 1588063
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  1588011 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 1588063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 3416762 - 3416798
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  3416762 ttaatcaatttaccctctccttcaaattcttatgtta 3416798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 3927687 - 3927635
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  3927687 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 3927635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 7723287 - 7723339
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  7723287 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 7723339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 9263887 - 9263840
Alignment:
Q  209 gttttgcacttatgttcaaaatgtctctt-gaacttgaaaatttatatt 256  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  9263887 gttttgcacttatgtgcaaaatg-ctctttgaacttgaaaatttatatt 9263840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 15207605 - 15207657
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  15207605 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 15207657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 15211478 - 15211426
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  15211478 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 15211426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 15564762 - 15564814
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||| ||| ||||||||||||||| | ||||||| ||||    
T  15564762 ttatcactgaattgtggaacatattagctaagttttgatgatatacaaccata 15564814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 23916056 - 23916108
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  23916056 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 23916108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 35942720 - 35942668
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  35942720 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 35942668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 36573668 - 36573632
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  36573668 ttaatcaatttaccctctccgtcaaattcttctgtta 36573632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 39324623 - 39324675
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  39324623 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 39324675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 39407778 - 39407726
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  39407778 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 39407726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 43085675 - 43085623
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  43085675 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 43085623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 9e-40; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 25376892 - 25377064
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||||||         ||||||||| ||||||||||||||||||        ||     
T  25376892 tgaagttttgcaattatgtgcaaaatgcctcttgaacttgaaaatttatatt----tttttcttatccttaaaagtgactgcattatca--------cta 25376979  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  25376980 aattgtggagcatattagctaagttttgacgctatacaaccatatatgttccctgaaacgatcaaacattaaccatgtattagag 25377064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 39364998 - 39365173
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| ||| ||||||||||||||||||| |        ||||||||| ||||||||||||||||||        ||     
T  39364998 tgaagttttgtacttatgtgcaaaatgcctcatgaacttgaaaatttatat-attttttttcttatccttaaaagtgactgcattatca--------ctg 39365088  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  39365089 aattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 39365173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 207 - 389
Target Start/End: Original strand, 29487446 - 29487619
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    ||||||||||||||||| ||||||||| | |||||||||||| |||||  |        ||||||||| ||||||||||||||||        |||||||    
T  29487446 aagttttgcacttatgtgcaaaatgtcccctgaacttgaaaaattataa-aaaaaaattcttatccttaaaagtgactgcattat--------cacttaa 29487536  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||| ||||||||||||    
T  29487537 ttgtggagcatgttagctaagttttgacggtatacaaccatatatgttccctcaaacgatcaaacattaatcatgtattagag 29487619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 412
Target Start/End: Complemental strand, 48731557 - 48731358
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||  ||||||| |   |||||||||||||||||||          ||||||||| |||||||||||||||||| |             
T  48731557 tgaagttttgcacttatgcgcaaaatgccctctgaacttgaaaatttatatattttttttgcttatccttaaaagtgactgcattatcattg-------- 48731466  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagaggcacttacattattg 404  Q
    ||||||||||||| |||||| ||||||||| | ||| || |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48731465 aattgtggagcatattagcttagttttgacagcatataaccatatatgttccctgaaacgatcaaacattaaccatgtattaaaggcacttacattattg 48731366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 16835310 - 16835217
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  16835310 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 16835217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 42774959 - 42775052
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||| ||||||||||||||    
T  42774959 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttccctgaaacgatcagacatttaccatgtattagag 42775052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 44431426 - 44431519
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||  | ||||||||||||||||||||||||||||||    
T  44431426 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcttttaaacgatcaaacattaaccatgtattagag 44431519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 1799647 - 1799554
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||  |||||| | |||||||||||||||||||||||| |||||    
T  1799647 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatttgttcctttaaacgatcaaacattaaccatgtactagag 1799554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 205 - 386
Target Start/End: Complemental strand, 21247473 - 21247302
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||          ||||||||| ||||||||||||||||||        ||     
T  21247473 tgaagttttgcacttatgtgcaaaatgccccatgaacttgaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------ctg 21247384  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtatta 386  Q
    ||||||||||||| |||||||||||||||  |||||||| |||| ||| ||| | |||||||||||||||||||||||||||    
T  21247383 aattgtggagcatattagctaagttttgattgtatacaaccatatatgatcctttaaacgatcaaacattaaccatgtatta 21247302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 16798186 - 16798011
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||| ||||||||| ||||||||| |  |||||||||||||||||||         || |||||| ||||||||||||||||||        |      
T  16798186 tgaagtttttcacttatgtgcaaaatgtccccagaacttgaaaatttatatt-ttttttttctgatccttaaaagtgactgcattatca--------ccg 16798096  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||||| || ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| || ||||||||    
T  16798095 aattgtggagtatattagctaagttttgacggtatacaaccatatatgttccctgaaacgatcaaacattaactatatattagag 16798011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 46295370 - 46295280
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtatta 386  Q
    |||||||| |||||| |||||| ||||||||||||||||| |||||||  ||| ||||||| | |||||||||||||||||||||||||||    
T  46295370 ttatcactgaattgtagagcatattagctaagttttgacgatatacaacgatatatgttcctttaaacgatcaaacattaaccatgtatta 46295280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 23703771 - 23703639
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||||||          ||||||||| ||||||| ||||||||||        ||     
T  23703771 tgaagttttgcacttatgtgcaaaatgcctcctgaacttgaaaatttatat---attttttcttatccttaaaagtgattgcattatca--------ctg 23703683  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  23703682 aattgtggagcatattagctaagttttgacggtatacaaccata 23703639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 40315521 - 40315396
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| | | ||||||||||||||||||||         ||||||||| ||||||||||||||||||        |||    
T  40315521 tgaagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatatt-ttttttttcttatccttaaaagtgactgcattatca--------ctt 40315431  T
Q  305 aattgtggagcatgttagctaagttttgacggtat 339  Q
    ||||||||||||| |||||||||||||||||||||    
T  40315430 aattgtggagcatattagctaagttttgacggtat 40315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 40116891 - 40116841
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  40116891 tgaagttttgcacttatgtgcaaaatgtccctcgaacttgaaaatttatat 40116841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 371
Target Start/End: Original strand, 45141727 - 45141785
Alignment:
Q  313 agcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    ||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  45141727 agcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 45141785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 348
Target Start/End: Original strand, 46294600 - 46294733
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||         ||||||||| ||||||| ||||||||||        ||     
T  46294600 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt--ttgttttcttatccttaaaagtgattgcattatca--------ctg 46294689  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||||| ||||||||||||||||| |||| |||||||    
T  46294690 aattgtggagcatattagctaagttttgacgatatataatcata 46294733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 1799006 - 1799058
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  1799006 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 1799058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 44432132 - 44432080
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  44432132 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 44432080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 207 - 348
Target Start/End: Original strand, 16834528 - 16834657
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    ||||||||||||||||| ||||||| | | | |||||||||||||||||||        ||||||||| ||||||| ||||||||||        || ||    
T  16834528 aagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatattatgtt----cttatccttaaaagtgattgcattatca--------ctgaa 16834615  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||| ||| ||||||||||||| ||||||| ||||    
T  16834616 ttgtggagcatattaactaagttttgacgatatacaaccata 16834657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 26615741 - 26615691
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||  ||||||| | |||||||||||||||||||||    
T  26615741 tgaagttttgcacttatgagcaaaatgccccttgaacttgaaaatttatat 26615691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 27235103 - 27235053
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| ||| ||||||| |||||||||||    
T  27235103 tgaagttttgcacttatgtgcaaaatgcctcctgaacttaaaaatttatat 27235053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 42233578 - 42233528
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  42233578 tgaagttttgcacttatgtgcaaaatgccacctgaacttgaaaatttatat 42233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 18806874 - 18806939
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    |||||| ||||| |||||||||||||| |||||||||| | || ||||||| |||||| |||||||    
T  18806874 attgtgaagcatattagctaagttttgtcggtatacaaccttatatgttccctgaaacaatcaaac 18806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 8897609 - 8897557
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||| ||||||||| ||||||| |||  ||||||||||||||||||    
T  8897609 cttgaagttttacacttatgtgcaaaatgcctcccgaacttgaaaatttatat 8897557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 19076247 - 19076195
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||| ||| ||||||||||||||||| ||||||| ||||    
T  19076247 ttatcactgaattgtggaacatattagctaagttttgacgatatacaaccata 19076195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 19124137 - 19124085
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||| ||| ||||||||||||||||| ||||||| ||||    
T  19124137 ttatcactgaattgtggaacatattagctaagttttgacgatatacaaccata 19124085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 21246691 - 21246743
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||| | ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  21246691 ttatcaatgaattgtggagcatattagctaagttttgacgatatacaaccata 21246743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 23703263 - 23703315
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||| ||||| ||||||||||||||||| ||||||| ||||    
T  23703263 ttatcactgaattgtgtagcatattagctaagttttgacgatatacaaccata 23703315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 9033728 - 9033779
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  9033728 tgaaattttgcacttatgtgcaaaatgccccttaaacttgaaaatttatatt 9033779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 13698264 - 13698213
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||| ||||||||| ||||||| | | ||||||||||||||||||||    
T  13698264 tgaagttttccacttatgtgcaaaatgccccatgaacttgaaaatttatatt 13698213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 21246612 - 21246663
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| || |||| ||| | ||||||||||||||||||    
T  21246612 tgaagttttgcacttatgtgcagaatgcctcataaacttgaaaatttatatt 21246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 26537717 - 26537666
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | || |||||| ||||||||||||    
T  26537717 tgaagttttgcacttatgtgcaaaatgcccctcgaacttaaaaatttatatt 26537666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 343
Target Start/End: Original strand, 27234652 - 27234699
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    |||||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  27234652 ttatcactgaattgtggaacatattaactaagttttgacggtatacaa 27234699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 32815017 - 32814966
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  32815017 tgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatatt 32814966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 38623776 - 38623725
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  38623776 tgaaattttgcacttatgtgcaaaatgccccttaaacttgaaaatttatatt 38623725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 1799728 - 1799678
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||| |||||||| ||||||| | | |||||||||||||||||||    
T  1799728 tgaagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat 1799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 6918753 - 6918703
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||| ||||||| |||  |||||| |||||||||||||    
T  6918753 aagttttgcacttatgtgcaaaatgcctcccgaacttaaaaatttatatta 6918703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 334
Target Start/End: Complemental strand, 11202069 - 11202031
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgac 334  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  11202069 ttatcactgaattgtggagcatattagctaagttttgac 11202031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 27134431 - 27134481
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||| | | |||||||||||||||||||    
T  27134431 tgaaattttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 27134481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 35156101 - 35156051
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||||||    
T  35156101 tgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatat 35156051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 43281998 - 43281948
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| |||||||  ||| |||||| |||||||||||    
T  43281998 tgaagttttgcacttatgtgcaaaatgcttctcgaacttaaaaatttatat 43281948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 48720931 - 48720981
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||||| |  ||||||||||||||||||    
T  48720931 tgaagttttacacttatgtgcaaaatgtcccccgaacttgaaaatttatat 48720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 13534095 - 13534058
Alignment:
Q  153 attaattaatttaccctctccgtcaaattcttatgtta 190  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  13534095 attaatcaatttaccccctccgtcaaattcttatgtta 13534058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 16797296 - 16797348
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  16797296 cttgaagttttgcacttatgtgcaaaatg-cccctaaacttgaaaatttatatt 16797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 22388431 - 22388467
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  22388431 ttaatcaatttaccctctccgtcaaattcttctgtta 22388467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 22775600 - 22775652
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  22775600 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 22775652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 24982807 - 24982859
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  24982807 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 24982859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 28297247 - 28297195
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||| || |||||| ||||||| | | |||||||||||||||||||    
T  28297247 cttgaagttttacagttatgtgcaaaatgccccctgaacttgaaaatttatat 28297195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 30634457 - 30634508
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||  |||||| |||||||||||||    
T  30634457 tgaagttttgcacttatgtgcaaaatg-ctcccgaacttaaaaatttatatta 30634508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 31058681 - 31058645
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  31058681 ttaatcaatttaccctctccgtcaaattcttctgtta 31058645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 31675547 - 31675599
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  31675547 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 31675599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 32832367 - 32832315
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  32832367 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 32832315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 38457289 - 38457237
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  38457289 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 38457237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 40116958 - 40116922
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  40116958 ttaatcaatttacccactccgtcaaattcttatgtta 40116922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 40315586 - 40315550
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  40315586 ttaattaatttaccccctccgtcaaattcttttgtta 40315550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 48803524 - 48803576
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| | |   |||||||||||||||||    
T  48803524 cttgaagttttgcacttatgtgcaaaatgccccccaaacttgaaaatttatat 48803576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 49216921 - 49216873
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttat 253  Q
    |||| |||||||||||||| ||||||| | | |||||||||||||||||    
T  49216921 tgaaattttgcacttatgtgcaaaatgccccctgaacttgaaaatttat 49216873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 51000964 - 51000912
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  51000964 tgaagttttgcacttatgtgcaaaatgccccctaaacttcaaaatttatatta 51000912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 52360261 - 52360209
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  52360261 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 52360209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 6915376 - 6915203
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||| |||||         ||||||||| ||||||||||||||||||        |||    
T  6915376 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaattaatatt---ttttttcttatccttaaaagtgactgcattatca--------ctt 6915288  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||| |||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||||    
T  6915287 aattgtagagcatattagctaagttttgacggtatacaaccatatatgttccctgaaacgatcaaacattaatcatgtattagag 6915203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 17648312 - 17648138
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| ||| ||||||| |||||||||||          ||||||||| ||||||||||||||||||        ||     
T  17648312 tgaagttttgtacttatgtgcaaaatgcctcctgaacttaaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------cta 17648223  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| | |||| |||||||||||||||||||||||||    
T  17648222 aattgtggagcatattagctaagttttgatggtatacaaccatatatgttcctttaaacaatcaaacattaaccatgtattagag 17648138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 390
Target Start/End: Complemental strand, 24087354 - 24087260
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagagg 390  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||| |||| ||||||| | |||| ||||||||||||||| ||||||||||    
T  24087354 ttatcactgaattgtgaagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacaatcaaacattaaccaagtattagagg 24087260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 5574125 - 5574298
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||  |||||||| ||||||| | |||||||||||||||||||||          ||||||||| ||||||||||||||| ||        ||     
T  5574125 tgaagttttttacttatgtgcaaaatgccccttgaacttgaaaatttatat--atttttttcttatccttaaaagtgactgcattacca--------ctg 5574214  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| | | ||||| ||||||||||| ||||||||||||    
T  5574215 aattgtggagcat-ttagctaagttttgacggtatacaatcatatatgtttctttaaacgttcaaacattaatcatgtattagag 5574298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 207 - 371
Target Start/End: Complemental strand, 19293176 - 19293021
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    ||||||||||||||||| |||||| || | |||||||||||||||||||          ||||||||| |||||||||||||| ||| |          |    
T  19293176 aagttttgcacttatgtgcaaaatatcccctgaacttgaaaatttatatatttttttttcttatccttaaaagtgactgcattgtcactg---------a 19293086  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    ||||| ||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  19293085 ttgtgaagcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 19293021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 6914288 - 6914337
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  6914288 aagttttgcgcttatgtgcaaaatgtctcttgaacttgaaaatttatatt 6914337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 348
Target Start/End: Original strand, 17647448 - 17647579
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    ||||||||||||||||| ||||||| | | |||||||||||||||||||          ||||||||| ||||||||||||||||||        || ||    
T  17647448 aagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------ctgaa 17647537  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||    
T  17647538 ttgtggagcatattagctaagttttgacgatatacaaccata 17647579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 6809426 - 6809375
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  6809426 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatatt 6809375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 5577231 - 5577166
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    |||||| ||||| ||| |||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  5577231 attgtgaagcatattaactaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 5577166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 5574908 - 5574856
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  5574908 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 5574856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 26359723 - 26359676
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  26359723 ttatcactgaattgtggaacatattagctaagttttgacggtatacaa 26359676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 13545360 - 13545310
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| |||  ||||||||||||||||||    
T  13545360 tgaagttttgcacttatgtgcaaaatgcctcccgaacttgaaaatttatat 13545310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 14196026 - 14196080
Alignment:
Q  201 ttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||||| ||||||| | |  ||||||||||||||||||    
T  14196026 ttcttgaagttttgcacttatgtacaaaatgccccccgaacttgaaaatttatat 14196080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 38424903 - 38424853
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  38424903 tgaagttttgcacttatgtgcaaaatgccccatgaacttgaaaatttatat 38424853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 20731020 - 20731069
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||||||| ||||||| | |||| ||||||||||||||||    
T  20731020 gaagttttgcacttatgtgcaaaatgccccttgcacttgaaaatttatat 20731069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 34217246 - 34217197
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||| |||||||||  |||||||| ||||||||||||    
T  34217246 aagttttgcacttatgtgcaaaatgtccgttgaacttaaaaatttatatt 34217197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 2301349 - 2301298
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||| ||||||||| ||||||| | ||| ||||||||||||||||||    
T  2301349 tgaagttttacacttatgtgcaaaatgcccctttaacttgaaaatttatatt 2301298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 14197934 - 14197887
Alignment:
Q  209 gttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||| | ||||||| | ||||||||||||||||||||||    
T  14197934 gttttgcacttatatgcaaaatgccccttgaacttgaaaatttatatt 14197887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 25751867 - 25751918
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||||| | | ||||||||||||||||||    
T  25751867 tgaaattttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatatt 25751918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 38090488 - 38090539
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||||| | | ||||||||||||||||||    
T  38090488 tgaaattttgcacttatgtgcaaaatgtcccataaacttgaaaatttatatt 38090539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 38977720 - 38977771
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||    
T  38977720 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaaattttttatt 38977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 7950949 - 7950999
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||| |||| ||||||  | |||||||||||||||||||||    
T  7950949 tgaagttttgcactaatgtgcaaaataccccttgaacttgaaaatttatat 7950999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 21360679 - 21360717
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaactt 243  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  21360679 tgaagttttgcacttatgtgcaaaatgcctcttgaactt 21360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 5574991 - 5574938
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| | ||||||| | | | ||||||||||||||||||    
T  5574991 cttgaagttttgcacttatatgcaaaatgccccataaacttgaaaatttatatt 5574938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 38424264 - 38424313
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||| |||||| || || |||||| ||||||||||||    
T  38424264 aagttttgcacttatgtgcaaaatatccctcgaacttaaaaatttatatt 38424313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 1829562 - 1829614
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  1829562 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 1829614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 4844376 - 4844324
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  4844376 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 4844324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 4911952 - 4912004
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  4911952 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 4912004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 6166593 - 6166541
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  6166593 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 6166541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 6835321 - 6835269
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| | || ||| || |||||||||||    
T  6835321 cttgaagttttgcacttatgtgcaaaatgcccctcgaatttaaaaatttatat 6835269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 6845658 - 6845606
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  6845658 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 6845606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 26359380 - 26359432
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||||||||| || ||| ||||||||||||| ||||||| ||||    
T  26359380 ttatcactgaattgtggagtatattaactaagttttgacgatatacaaccata 26359432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 32272522 - 32272574
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  32272522 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 32272574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 37895888 - 37895848
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacgg 336  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  37895888 ttatcacttaattgtggagcatattaattaagttttgacgg 37895848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 38465261 - 38465313
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  38465261 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 38465313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 38978369 - 38978317
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| | |  |||||| |||||||||||    
T  38978369 cttgaagttttgcacttatgtgcaaaatgccccccgaactttaaaatttatat 38978317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 39760731 - 39760783
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  39760731 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 39760783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 40195391 - 40195443
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  40195391 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 40195443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 40315029 - 40315081
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  40315029 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 40315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 42546280 - 42546316
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  42546280 ttaatcaatttaccctctccgtcaaattcttctgtta 42546316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 205 - 412
Target Start/End: Complemental strand, 3107004 - 3106807
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | ||||||| |||||||||||          ||||||||| ||||||||||||||||||        ||     
T  3107004 tgaagttttgcacttatgtgcaaaatgccccatgaacttaaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------ctg 3106915  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagaggcacttacattattg 404  Q
    ||||||||||||| |||| |||||||| ||| ||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||    
T  3106914 aattgtggagcatattagttaagttttaacgatatacaaccatatatgttccctgaaacgaccaaacattaaccatgtattagaggcatttatattattg 3106815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 9708906 - 9708733
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| | | ||||||| ||||||||||||         ||||||||| ||||||||||||||||||        ||     
T  9708906 tgaagttttgtacttatgtgcaaaatgccccctgaactttaaaatttatatt---ttttttcttatccttaaaagtgactgcattatca--------ctg 9708818  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  9708817 aattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 9708733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 36207211 - 36207306
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacgg--tatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||| |||| ||||||| |||||||| |||||||||||||||||||||||    
T  36207211 ttatcacttaattgtggagcatattagctaagttttgacggtatatacaaccatatatgttccctgaaacgaacaaacattaaccatgtattagag 36207306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 15830797 - 15830704
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| | |||| |||||||||||| ||||||||||||    
T  15830797 ttatcactgaattgtggagcatattagctaagttttgatggtatacaaccatatatgttcctttaaacaatcaaacattaatcatgtattagag 15830704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 38937620 - 38937690
Alignment:
Q  319 ttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||| |||||||||||||||||||| || | ||||| ||||||||||||||| ||||||||||||||||||    
T  38937620 ttagataagttttgacggtatacaaccacatatgttacatgaaacgatcaaaaattaaccatgtattagag 38937690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 7337927 - 7337988
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||| |||||||||||||||| || ||||||| | |||||||||||||||||||||    
T  7337927 aaatattttcctgaagttttgcacttaagtgcaaaatgacccttgaacttgaaaatttatat 7337988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 348
Target Start/End: Original strand, 9708030 - 9708163
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||         ||||||||| ||||||| ||||||||||        ||     
T  9708030 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt--ttgttttcttatccttaaaagtgattgcattatca--------ctg 9708119  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  9708120 aattgtggagcatattagctaagttttgacgatatacaaccata 9708163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 21545301 - 21545253
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttat 253  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  21545301 tgaagttttgcacttatgtgcaaaatgcctcctgaacttgaaaatttat 21545253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 36207905 - 36207853
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||||||||  || ||||||||||||||||||||||||||||||    
T  36207905 ttatcactgaattgtggacaatattagctaagttttgacggtatacaatcata 36207853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 3106311 - 3106361
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||||||||| ||||||| | | ||||||||||||||||||||    
T  3106311 gaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt 3106361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 38935880 - 38935930
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  38935880 tgaagttttgcacttatgtgcaaaatgccccgtgaacttgaaaatttatat 38935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 35059164 - 35059111
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  35059164 cttgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatatt 35059111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 20463626 - 20463574
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||| ||||||||| |||||||   |||||||||||||||||||||    
T  20463626 cttgaagttttacacttatgtgcaaaatgctccttgaacttgaaaatttatat 20463574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 12138646 - 12138697
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||    
T  12138646 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaaattttttatt 12138697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 36207136 - 36207183
Alignment:
Q  209 gttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||||||  |||||||| | ||||||||||||||||||||    
T  36207136 gttttgcacttatgtgtaaaatgtcccatgaacttgaaaatttatatt 36207183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 4646997 - 4646935
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||| ||| ||||||||||||||||||| ||||||  | | |||| |||||||||||||||    
T  4646997 aaatatcttcctgaagttttgcacttatgtgcaaaatcccccctgaatttgaaaatttatatt 4646935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 5440254 - 5440308
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  5440254 cttgaagttttgcacttatgtgcaaaatgcccctcaaactttaaaatttatatta 5440308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 18060459 - 18060409
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||||| | | |||||||||||||||||    
T  18060459 tgaaattttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat 18060409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 20207178 - 20207240
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||| || |||||||||||||||| || ||||||||| ||  ||||| ||||||||||||    
T  20207178 aaatattctcctgaagttttgcacttacgtgcaaaatgtccctcaaacttaaaaatttatatt 20207240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 23849110 - 23849160
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||| |||||| ||||||||| |  ||||||||||||||||||    
T  23849110 tgaagttttgcaattatgtgcaaaatgtcccccgaacttgaaaatttatat 23849160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 32892814 - 32892760
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  32892814 cttgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 32892760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 36207984 - 36207936
Alignment:
Q  207 aagttttgcacttatgttcaaaatg-tctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  36207984 aagttttgcacttatgtgcaaaatgctctc-tgaacttgaaaatttatat 36207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 39500425 - 39500478
Alignment:
Q  202 tcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||| ||||||||| |||||| || |  ||||||||||||||||||    
T  39500425 tcttgaagttttacacttatgtgcaaaatatcccccgaacttgaaaatttatat 39500478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Original strand, 41425575 - 41425624
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttata 254  Q
    ||||||||||||||||||| ||||||  | | ||||||||||||||||||    
T  41425575 tgaagttttgcacttatgtgcaaaataccccatgaacttgaaaatttata 41425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 3074923 - 3074871
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  3074923 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 3074871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 6730507 - 6730543
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  6730507 ttaatcaatttaccctctccttcaaattcttatgtta 6730543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 7275562 - 7275514
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||||||| | |   |||||||||||||||||    
T  7275562 aagttttgcacttatgttcaaaatgccccccaaacttgaaaatttatat 7275514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 7278055 - 7278099
Alignment:
Q  345 catacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||| ||||||||| |||||||||||||||||||  |||||||||    
T  7278055 catatatgttccataaaacgatcaaacattaaccgcgtattagag 7278099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 8345925 - 8345977
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  8345925 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 8345977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 340
Target Start/End: Original strand, 15830092 - 15830136
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtata 340  Q
    |||||||| |||||||||||||  |||||||||||||||| ||||    
T  15830092 ttatcactgaattgtggagcataatagctaagttttgacgatata 15830136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 20207123 - 20207159
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  20207123 ttaatcaatttaccctctctgtcaaattcttatgtta 20207159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 33008429 - 33008378
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | || ||||||||||| ||||||||    
T  33008429 tgaagttttgcacttatgtgcaaaatg-ccctcgaacttgaaaaattatatta 33008378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 36566423 - 36566371
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  36566423 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 36566371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 38939199 - 38939147
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||||||||||| | | | || || |||||||||||    
T  38939199 cttgaagttttgcacttatgttcaaaatgccgcctaaatttaaaaatttatat 38939147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 40598581 - 40598633
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  40598581 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 40598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 48083185 - 48083277
Alignment:
Q  297 tatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  48083185 tatcactgaattgtggagcatgttagctaaattttgacggtatacaaccatatatgttccctgaaacgatcaaacattaaccatgtattagag 48083277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 6336915 - 6336822
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  6336915 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 6336822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 203 - 385
Target Start/End: Complemental strand, 42260244 - 42260071
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcac 302  Q
    ||||||||||||||||||||| ||||||  | | |||| ||||||||||||| ||        ||||||||| ||||||| ||||        |||||||    
T  42260244 cttgaagttttgcacttatgtgcaaaataccccctgaatttgaaaatttata-tattttttttcttatccttaaaagtgattgca--------ttatcac 42260154  T
Q  303 ttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtatt 385  Q
    ||||||||| ||||| || |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  42260153 ttaattgtgtagcatattggctaagttttgacggtatacaaccatatatgttccctgaaacgatcaaacattaaccatgtatt 42260071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 56443368 - 56443461
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||| ||||| ||||||    
T  56443368 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaatcatgtcttagag 56443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 1613607 - 1613781
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| ||| |||||||||||||||||||          ||||||||| ||||||| ||||||||||        ||     
T  1613607 tgaagttttgtacttatgtgcaaaatgcctcctgaacttgaaaatttatat--atttttttcttatccttaaaagtgattgcattatca--------cta 1613696  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||| |||| || | |||| |||||||||||||||||||||||||    
T  1613697 aattgtggagcatattagctaagttttgatggtatacaaccatatatgtccctttaaacaatcaaacattaaccatgtattagag 1613781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 55082676 - 55082769
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||  ||| ||||||| | |||||||||||||||||| |||||||||||    
T  55082676 ttatcactgaattgtggagcatattagctaaattttgacggtatacaacaatatatgttcctttaaacgatcaaacattaactatgtattagag 55082769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 371
Target Start/End: Original strand, 17215097 - 17215249
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactta 305  Q
    |||||||||||||||||| ||||||| | | ||||||||||||||||||||         ||||||||| |||||||||||||||||| |              
T  17215097 gaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt----tttttcttatccttaaaagtgactgcattatcactg--------- 17215183  T
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    |||||| ||||| |||| |||||||||||||||| ||| |||| ||||||| ||||||||||||||    
T  17215184 attgtgaagcatattagttaagttttgacggtattcaaccatatatgttccctgaaacgatcaaac 17215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 23590636 - 23590689
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  23590636 cttgaagttttgcacttatgtgcaaaatgtctcctgaacttgaaaatttatatt 23590689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 210 - 348
Target Start/End: Original strand, 42259445 - 42259572
Alignment:
Q  210 ttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaattg 309  Q
    ||||||||| |||| ||||||| | | ||||||||||||||||||||         ||||||||| ||||||||||||||||||        || |||||    
T  42259445 ttttgcactcatgtgcaaaatgccccatgaacttgaaaatttatatt---ttatttcttatccttaaaagtgactgcattatca--------ctgaattg 42259533  T
Q  310 tggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42259534 tggagcatattagctaagttttgacggtatacaatcata 42259572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 36112173 - 36112039
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||||||||         ||||||||| ||||||||||||        ||||||||     
T  36112173 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt-ttgtttttcttatccttaaaagtgactgca--------ttatcactg 36112083  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||| ||| |||||||| |||||||||||||||| ||||    
T  36112082 aattgtggaacatattagctaaattttgacggtatacaaccata 36112039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 371
Target Start/End: Complemental strand, 39334262 - 39334197
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    |||||| ||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  39334262 attgtgaagcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 39334197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 25706038 - 25705986
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  25706038 cttgaagttttgcacttatgtgcaaaatgtctcccgaacttgaaaatttatat 25705986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 52177316 - 52177264
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  52177316 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatatta 52177264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 347
Target Start/End: Original strand, 12800372 - 12800509
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaa-cttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcact 303  Q
    ||||||||||||||||||| ||||||| |  || || ||||||||||||||| |        ||||||||| ||||||| ||||||||     |||||||    
T  12800372 tgaagttttgcacttatgtgcaaaatgcccgtttaaacttgaaaatttatat-attttttttcttatccttaaaagtgattgcattat-----tatcact 12800465  T
Q  304 taattgtggagcatgttagctaagttttgacggtatacaatcat 347  Q
     |||||| |||||| ||||||| |||||||||||||||||||||    
T  12800466 gaattgtagagcatattagctatgttttgacggtatacaatcat 12800509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 348
Target Start/End: Complemental strand, 56444152 - 56444020
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| ||||  ||||||||||||||||||         ||||||||| ||||||| ||||||||||        ||     
T  56444152 tgaagttttgcacttatgtgcaaaatgcctcta-aacttgaaaatttatatt--ttgttttcttatccttaaaagtgattgcattatca--------ctg 56444064  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  56444063 aattgtggagcatattagctaagttttgacgatatacaaccata 56444020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 15739626 - 15739577
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  15739626 gaagttttgcacttatgtgcaaaatgccccttgaacttgaaaatttatat 15739577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 23395984 - 23396037
Alignment:
Q  202 tcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| || |||||||||||  ||||||||||||||||||    
T  23395984 tcttgaagttttgcacttacgtacaaaatgtctcccgaacttgaaaatttatat 23396037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 55778181 - 55778129
Alignment:
Q  204 ttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  55778181 ttgaaattctgcacttatgtgcaaaatgtctcctgaacttgaaaatttatatt 55778129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 55842361 - 55842309
Alignment:
Q  204 ttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  55842361 ttgaaattctgcacttatgtgcaaaatgtctcctgaacttgaaaatttatatt 55842309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 25705424 - 25705475
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||| |||||  |||||||||||||||||||    
T  25705424 tgaagttttgcacttatgtgcaaaaagtctcccgaacttgaaaatttatatt 25705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 220770 - 220720
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| ||||||    
T  220770 tgaaattttgcacttatgtgcaaaatgtcccttgaacttgaaaaattatat 220720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 1614866 - 1614816
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  1614866 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 1614816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 36111639 - 36111689
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||||||||||||||||||    
T  36111639 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat 36111689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 1614785 - 1614741
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtata 340  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||    
T  1614785 ttatcactgaattgtggagcatattagctaagttttgacgatata 1614741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 7862869 - 7862817
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||| ||||||||| ||||||||| | | |||||||||||||||||    
T  7862869 cttgaagttttacacttatgtgcaaaatgtcccctaaacttgaaaatttatat 7862817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 23465770 - 23465822
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |  |||||| |||||||||||||    
T  23465770 tgaagttttgcacttatgtgcaaaatgtcccccgaacttaaaaatttatatta 23465822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 47838111 - 47838163
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| |||||||||||   ||||| |||||||||||||    
T  47838111 tgaagttttgcacttatgtgcaaaatgtctcccaaacttaaaaatttatatta 47838163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 12594734 - 12594785
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  12594734 tgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatatt 12594785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 23161257 - 23161308
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||| ||||    
T  23161257 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaaattttttatt 23161308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 38575702 - 38575752
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | || |||||||||||||||||||    
T  38575702 tgaagttttgcacttatgtgcaaaatg-ccctcgaacttgaaaatttatatt 38575752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 40220796 - 40220745
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||||||| || ||||||||| |  |||||||||||||||||||    
T  40220796 tgaagttttgcacttacgtacaaaatgtcccccgaacttgaaaatttatatt 40220745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 55083434 - 55083383
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  55083434 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 55083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 4941044 - 4940990
Alignment:
Q  202 tcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||||  |||||||| |  |||||| ||||||||||||    
T  4941044 tcttgaagttttgcacttatgtgtaaaatgtcccccgaacttaaaaatttatatt 4940990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 29860092 - 29860142
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||||| || |||||||  ||| ||||||||||||||||||    
T  29860092 tgaagttttgcacttacgtgcaaaatgcatctcgaacttgaaaatttatat 29860142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 29861004 - 29860954
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||| |||  ||||||||||||||||||    
T  29861004 tgaagttttacacttatgtgcaaaatgcctcccgaacttgaaaatttatat 29860954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 31559192 - 31559242
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||||||||||||||||||   |||||||||| || |||||    
T  31559192 tgaagttttgcacttatgttcaaaatgtcctatgaacttgaatatatatat 31559242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 40145806 - 40145856
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||||| |  ||||||||||||||||||    
T  40145806 tgaagttttacacttatgtgcaaaatgtcccccgaacttgaaaatttatat 40145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 21857769 - 21857822
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||| ||||||| | |  |||||| ||||||||||||    
T  21857769 cttgaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatatt 21857822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 21913632 - 21913685
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||||| ||||||| | |  |||||| ||||||||||||    
T  21913632 cttgaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatatt 21913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 56473707 - 56473658
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttata 254  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||    
T  56473707 tgaagttttgcacttatgtacaaaatgccccccgaacttgaaaatttata 56473658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 6528349 - 6528401
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  6528349 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 6528401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 12594668 - 12594704
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  12594668 ttaatcaatttaccctctccgtcaaattcttctgtta 12594704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 17971652 - 17971600
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  17971652 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 17971600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 24318604 - 24318552
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  24318604 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 24318552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 27716238 - 27716187
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | |  ||||||||||||||||||||    
T  27716238 tgaagttttgcacttatgtgcaaaatgac-cccgaacttgaaaatttatatta 27716187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 32465599 - 32465563
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  32465599 ttaatcaatttaccccctccgtcaaattcttatgtta 32465563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 34476751 - 34476699
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  34476751 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 34476699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 40131176 - 40131228
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  40131176 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 40131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 42260309 - 42260273
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  42260309 ttaatcaatttaccctctccgtcaaattcttctgtta 42260273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 48799822 - 48799870
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||| ||||||||| ||||||| |||  ||||||||||||||||||    
T  48799822 aagttttacacttatgtacaaaatgcctcccgaacttgaaaatttatat 48799870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 26831690 - 26831864
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| | | ||||||||||||||||||| |        ||||||||| ||||||||||||||||||        ||     
T  26831690 tgaagttttgtacttatgtgcaaaatgccccatgaacttgaaaatttatat-atattttttcttatccttaaaagtgactgcattatca--------ctg 26831780  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||    
T  26831781 aattgtggagcat-ttagctaagttttgacggtatacaataatatatgttcctttaaacgatcaaacattaaccatgtattagag 26831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 26928233 - 26928408
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| | | ||||||||||||||||||| |        ||||||||| ||||||| ||||||||||        ||     
T  26928233 tgaagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat-atattttttcttatccttaaaagtgattgcattatca--------ctg 26928323  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  26928324 aattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 26928408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 36897634 - 36897727
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||| ||||||||||||    
T  36897634 ttatcactgaattgtagagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaatcatgtattagag 36897727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 14103751 - 14103670
Alignment:
Q  308 tgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||||| ||||||||||||||| ||||||||| |||| ||||||| | ||||||||||||||||| ||||||||||||    
T  14103751 tgtggagcatattagctaagttttgatggtatacaaccatatatgttcctttaaacgatcaaacattaatcatgtattagag 14103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 14413768 - 14413687
Alignment:
Q  308 tgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||||| ||||||||||||||| ||||||||| |||| ||||||| | ||||||||||||||||| ||||||||||||    
T  14413768 tgtggagcatattagctaagttttgatggtatacaaccatatatgttcctttaaacgatcaaacattaatcatgtattagag 14413687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 15752471 - 15752555
Alignment:
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||  |||||||    
T  15752471 aattgtggagcatattagataagttttgacggtatacaaccatatatgttccctgaaccgatcaaacattaaccatccattagag 15752555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 371
Target Start/End: Complemental strand, 29418072 - 29417916
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||||||||         ||||||||| |||||||||||||| ||| |             
T  29418072 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt-ttttttttcttatccttaaaagtgactgcattgtcactg-------- 29417982  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
     |||||| ||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  29417981 -attgtgaagcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 29417916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 371
Target Start/End: Original strand, 17774540 - 17774605
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
    |||||| | ||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  17774540 attgtgaatcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 17774605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 14103059 - 14103111
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  14103059 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 14103111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 14413076 - 14413128
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  14413076 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 14413128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 42260930 - 42260998
Alignment:
Q  306 attgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacatt 374  Q
    |||||| | ||| |||||||| |||||||||||||||| |||| ||||||  |||||||||||||||||    
T  42260930 attgtgaaacatattagctaaattttgacggtatacaaccatatatgttctctgaaacgatcaaacatt 42260998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 44157614 - 44157666
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| |||||||  || |||||||||||||||||||    
T  44157614 cttgaagttttgcacttatgtgcaaaatgcttcatgaacttgaaaatttatat 44157666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 15752388 - 15752435
Alignment:
Q  209 gttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  15752388 gttttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatatt 15752435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 33227828 - 33227878
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| |  ||||||||||||||||||||    
T  33227828 tgaagttttgcacttatgtgcaaaatgcccgttgaacttgaaaatttatat 33227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 34959093 - 34959043
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||||| | |||||||||||||||||||    
T  34959093 tgaagttttacacttatgtgcaaaatgtcccctgaacttgaaaatttatat 34959043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 2755961 - 2755909
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | ||||||| |||||||||||||    
T  2755961 tgaagttttgcacttatgtgcaaaatgccccatgaacttaaaaatttatatta 2755909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 15753175 - 15753123
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  15753175 ttatcactgaattgtggagcatattagccaagttttaacggtatacaaccata 15753123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 18829221 - 18829273
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| |||  |||||||||||| |||||    
T  18829221 cttgaagttttgcacttatgtgcaaaatgcctcccgaacttgaaaatatatat 18829273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 23678814 - 23678763
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  23678814 tgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatatt 23678763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 31308399 - 31308449
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||||||||    
T  31308399 tgaagttttgcacttatgtgcaaaatg-cccctgaacttgaaaatttatatt 31308449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 389
Target Start/End: Original strand, 42261055 - 42261086
Alignment:
Q  358 tgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||||||||||||||||||||||    
T  42261055 tgaaacgatcaaacattaaccatgtattagag 42261086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 43759649 - 43759700
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  43759649 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 43759700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 16083143 - 16083193
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||| | ||| |||||||||||||||||    
T  16083143 tgaaattttgcacttatgtgcaaaatgacccttaaacttgaaaatttatat 16083193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 17774451 - 17774501
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| | | |||| ||||||||||||||    
T  17774451 tgaagttttgcacttatgtgcaaaatgccccctgaaattgaaaatttatat 17774501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 24213310 - 24213264
Alignment:
Q  210 ttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||||| ||||||| | ||| ||||||||||||||||||    
T  24213310 ttttgcacttatgtgcaaaatgccccttaaacttgaaaatttatatt 24213264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 33210420 - 33210470
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| |||||||||||||| ||||||||| | | |||||||||||||||||    
T  33210420 tgaaattttgcacttatgtgcaaaatgtcccctaaacttgaaaatttatat 33210470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 5198379 - 5198440
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||| || ||||||||||||||||||| ||||||| | |  |||||| |||||||||||    
T  5198379 aaatattctcctgaagttttgcacttatgtgcaaaatgccacccgaacttaaaaatttatat 5198440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 21125615 - 21125574
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaa 246  Q
    ||||||||||||||||||| ||||||| | ||||||||||||    
T  21125615 tgaagttttgcacttatgtgcaaaatgccccttgaacttgaa 21125574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 30023258 - 30023221
Alignment:
Q  153 attaattaatttaccctctccgtcaaattcttatgtta 190  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  30023258 attaatcaatttaccctctccgtcaaattcttctgtta 30023221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 34345891 - 34345846
Alignment:
Q  210 ttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||    
T  34345891 ttttgcacttatgtgcaaaatgtcccctcaacttgaaaatttatat 34345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 48343727 - 48343780
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||| |||||||||||||| ||||||| | | | ||||||||||||||||||    
T  48343727 cttgaaattttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 48343780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 1730188 - 1730136
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| ||||  ||||| ||||| |||||||    
T  1730188 tgaagttttgcacttatgtgcaaaatgcctctcaaacttaaaaatatatatta 1730136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 7337326 - 7337378
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  7337326 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 7337378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 8641061 - 8641113
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  8641061 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 8641113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 17272498 - 17272446
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  17272498 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 17272446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 21176673 - 21176621
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  21176673 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 21176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 31309342 - 31309290
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| | |  |||||| |||||||||||    
T  31309342 cttgaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatat 31309290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 33697283 - 33697231
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||||| ||||||| | |  |||||| |||||||||||    
T  33697283 cttgaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatat 33697231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 38354133 - 38354185
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  38354133 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 38354185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 44950576 - 44950525
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||| | ||||||||||||| ||||||||| ||||||||||||||| ||||    
T  44950576 ttatcattgaattgtggagcatattagctaag-tttgacggtatacaaccata 44950525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 46100288 - 46100340
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  46100288 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 46100340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 48936317 - 48936369
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | |  |||||| |||||||||||||    
T  48936317 tgaagttttgcacttatgtgcaaaatgccccccgaacttaaaaatttatatta 48936369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 42323 - 42230
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  42323 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 42230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 42402 - 42354
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||| |||||||| ||||||| | | |||||||||||||||||||    
T  42402 aagttttgtacttatgtgcaaaatgccccgtgaacttgaaaatttatat 42354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 8e-31; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Original strand, 1092173 - 1092346
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||||| | |||||||||||||||||||          ||||||||| ||||||||||||||||||        ||     
T  1092173 tgaagttttgtacttatgtgcaaaatgtcccctgaacttgaaaatttatat--atatttttcttatccttaaaagtgactgcattatca--------ctg 1092262  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||||||| ||||| ||||||||||||    
T  1092263 aattgtggagcat-ttagctaagttttgacggtatacaatcatatatgttcctttaaacgatcaaaaattaatcatgtattagag 1092346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 205 - 389
Target Start/End: Complemental strand, 32751712 - 32751538
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| ||| |||| ||||||||||||||          ||||||||| ||||||||||||||||||        ||     
T  32751712 tgaagttttgtacttatgtgcaaaatgcctcctgaatttgaaaatttatat--atttttttcttatccttaaaagtgactgcattatca--------ctg 32751623  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  32751622 aattgtggagcatattagctatgttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 32751538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 24783028 - 24782935
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||| ||||||||||||||||||||||||||    
T  24783028 ttatcactgaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaatgatcaaacattaaccatgtattagag 24782935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 54627969 - 54627876
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| |||| ||||||| | ||||||||||||||||||||||||||||||    
T  54627969 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 54627876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 210 - 387
Target Start/End: Original strand, 35233904 - 35234072
Alignment:
Q  210 ttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaattg 309  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||          ||||||||| ||||||||||||||||||        || |||||    
T  35233904 ttttgcacttatgtgcaaaatgtcccttgaacttgaaaatttatatg-ctttttttcttatccttaaaagtgactgcattatca--------ctgaattg 35233994  T
Q  310 tggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattag 387  Q
    ||||| || ||||||||||||| ||||||||||| |||| || |||  ||||||||||||||||||||||||||||||    
T  35233995 tggaggatattagctaagtttttacggtatacaaccatatattttctctgaaacgatcaaacattaaccatgtattag 35234072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 20819462 - 20819555
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| | |||| |||||||||||||||||||||||||    
T  20819462 ttatcactgaattgtggagcatattagctaagttttgatggtatacaaccatatatgttcctttaaacaatcaaacattaaccatgtattagag 20819555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 40066434 - 40066341
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| |||||||||||||||||||||| || |||| ||||||  | ||||||||||||||||||||||||||||||    
T  40066434 ttatcactgaattgtggagcatattagctaagttttgacggtatagaaccatatatgttcttttaaacgatcaaacattaaccatgtattagag 40066341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 194 - 389
Target Start/End: Original strand, 54492867 - 54493050
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatca 293  Q
    |||||||| | ||||||||||||||||||| ||||||| | | ||||||||||||||||||||          |||||||| ||||||||||||||||||    
T  54492867 aaatatttccctgaagttttgcacttatgtgcaaaatgccgcctgaacttgaaaatttatatttttttg----ttatccttaaaagtgactgcattatca 54492962  T
Q  294 atttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
     |         ||||||||||||| |||| |||||||||||||||||||| |||| ||||||   ||||||||||||||||||  |||||||||||    
T  54492963 ttg--------aattgtggagcatattagttaagttttgacggtatacaaccatatatgttctccgaaacgatcaaacattaatgatgtattagag 54493050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 35235083 - 35235176
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||| ||||||| |||||| || |||| ||||||| | ||||||||||||||||||||||||||||||    
T  35235083 ttatcactgaattgtggagcatattagctatgttttgatggtatataaccatatatgttcctttaaacgatcaaacattaaccatgtattagag 35235176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 194 - 389
Target Start/End: Complemental strand, 54603162 - 54602977
Alignment:
Q  194 aaatattttcttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatca 293  Q
    |||||| ||| |||||||||| |||||||| ||||||| | | |||||||||||||||||||          |||||| || ||||||||||||||||||    
T  54603162 aaatatcttcctgaagttttgtacttatgtgcaaaatgccccatgaacttgaaaatttatat--atttttttcttatctttaaaagtgactgcattatca 54603065  T
Q  294 atttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
            || ||||||||||||| ||||||||||||| ||| ||||||| |||| ||||| | | |||||||| |||||||||||||||||||||    
T  54603064 --------ctgaattgtggagcatattagctaagttttaacgatatacaaccatatatgtttctttaaacgatcgaacattaaccatgtattagag 54602977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 41221894 - 41221969
Alignment:
Q  337 tatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagaggcacttacattattgtttgttta 412  Q
    ||||||| |||| ||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  41221894 tatacaaccatatatgttccctgaaatgatcaaacattaaccatgtattaaagacacttacattattgtttgttta 41221969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 348
Target Start/End: Original strand, 32750843 - 32750978
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    |||||||||| |||||||| ||||||| ||| ||||||||||| |||||||          ||||||||| ||||||||||||||||||        ||     
T  32750843 tgaagttttgtacttatgtgcaaaatgcctcatgaacttgaaattttatatatatttttttcttatccttaaaagtgactgcattatca--------ctg 32750934  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||    
T  32750935 aattgtagagcatattagctaagttttgacggtatacaaccata 32750978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 371
Target Start/End: Original strand, 40791513 - 40791669
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||||||| |        ||||||||| |||||||||||||| ||| |             
T  40791513 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatat-attttttttcttatccttaaaagtgactgcattgtcactg-------- 40791603  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
     |||||| ||||| ||| |||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  40791604 -attgtgaagcatattaactaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 40791669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 372
Target Start/End: Complemental strand, 20411071 - 20410995
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaaca 372  Q
    |||||||| ||||||  ||||| ||||||||||||||||||||||||| |||| ||||| | | |||||||||||||    
T  20411071 ttatcactgaattgtaaagcatattagctaagttttgacggtatacaaccatatatgtttctttaaacgatcaaaca 20410995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 35235787 - 35235735
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||    
T  35235787 ttatcactgaattgtggagcatattagctaagttttgacgatatacaatcata 35235735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 46651021 - 46650973
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaat 344  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  46651021 ttatcactgaattgtggagcatattagctaagttttgacggtatacaat 46650973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 24782248 - 24782299
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  24782248 tgaagttttgcacttatgtgcaaaatgtcccttaaacttgaaaatttatatt 24782299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 55481499 - 55481550
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  55481499 tgaagttttgcacttatgtgcaaaatgtcccctgaacttgaaaatttatatt 55481550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 35234660 - 35234608
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||| | ||| ||||||||||||||||||||||||||||||    
T  35234660 ttatcactgaattgtgcaacatattagctaagttttgacggtatacaatcata 35234608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 54627266 - 54627318
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||||| ||||||| ||||    
T  54627266 ttatcactgaattgtggagcatattagctaagttttgacgatatacaaccata 54627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 29588998 - 29588948
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  29588998 tgaagttttgcacttatgtgcaaaatgtc-cgtgaacttgaaaatttatatt 29588948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 40009470 - 40009521
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||||||    
T  40009470 tgaagttttgcatttatgtacaaaatgcctcatgaacttgaaaatttatatt 40009521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 55482296 - 55482245
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| |||||||||   ||||||||||||||||||||    
T  55482296 tgaagttttgcacttatgtgcaaaatgtccactgaacttgaaaatttatatt 55482245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 33128573 - 33128623
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||| ||| |||||||||| ||||||||| |||||||||||||||||||||    
T  33128573 tgaaatttcgcacttatgtgcaaaatgtcccttgaacttgaaaatttatat 33128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 44405309 - 44405259
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||| ||||||||| | ||||||| |||||||||||||    
T  44405309 aagttttgcacttatgtgcaaaatgtcccctgaacttaaaaatttatatta 44405259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 8015564 - 8015516
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||| |||| || | |||||||||||||||||||||    
T  8015564 aagttttgcacttatgtacaaattgccccttgaacttgaaaatttatat 8015516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 24782317 - 24782369
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||||| ||||    
T  24782317 ttatcactgaattgttgagcatattagctaagttttgacgatatacaaccata 24782369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 43727186 - 43727238
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| |||||||||||   ||||| |||||||||||||    
T  43727186 tgaagttttgcacttatgtgcaaaatgtctcccaaacttaaaaatttatatta 43727238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 40065648 - 40065699
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  40065648 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 40065699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 50672550 - 50672499
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||| |||||||||||||| ||||||| | | ||||||||||||||||||||    
T  50672550 tgaaattttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt 50672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 19238371 - 19238425
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||||||||||||| | |   ||||| |||||||||||||    
T  19238371 cttgaagttttgcacttatgttcaaaatgcccccccaacttaaaaatttatatta 19238425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 35235002 - 35235052
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||| |||||||| ||||||| | | |||||||||||||||||||    
T  35235002 tgaagttttgtacttatgtacaaaatgccccctgaacttgaaaatttatat 35235052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 40066515 - 40066465
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||| |||||||||||||||| | | | |||||||||||||||||    
T  40066515 tgaagttttgtacttatgttcaaaatgccccctaaacttgaaaatttatat 40066465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 46651103 - 46651053
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||| |||||||| ||||||| ||| ||||||| |||||||||||    
T  46651103 tgaagttttgtacttatgtgcaaaatggctcctgaactttaaaatttatat 46651053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 257
Target Start/End: Original strand, 49223377 - 49223426
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||    
T  49223377 aagttttgcacttatgtgcaaaatgt-tctcgaacttaaaaatttatatta 49223426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 54602288 - 54602338
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  54602288 gaagttttgcacttatgtgcaaaatgccccataaacttgaaaatttatatt 54602338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 343
Target Start/End: Complemental strand, 55482207 - 55482169
Alignment:
Q  305 aattgtggagcatgttagctaagttttgacggtatacaa 343  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  55482207 aattgtggagcatattagctaagttttgatggtatacaa 55482169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 14899394 - 14899341
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    |||||| |||||||||||||| ||||||| | | | ||||||||||||||||||    
T  14899394 cttgaaattttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 14899341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 24783106 - 24783057
Alignment:
Q  206 gaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| |||||||| ||||||| | | |||||||||||||||||||    
T  24783106 gaagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat 24783057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 37332757 - 37332810
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||| ||| ||||||| ||   |||||||||||||||||||    
T  37332757 cttgaagttttgcacttgtgtgcaaaatgccttccgaacttgaaaatttatatt 37332810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 20819379 - 20819431
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||| |||||||| ||||||| | | ||||||| |||||||||||    
T  20819379 cttgaagttttgtacttatgtgcaaaatgccccctgaacttaaaaatttatat 20819431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 20820169 - 20820117
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||| ||| |||||||||||||| || ||||||| ||||    
T  20820169 ttatcactgaattgtggaacatattagctaagttttgtcgatatacaaccata 20820117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 23908510 - 23908562
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  23908510 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 23908562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 35154053 - 35154105
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  35154053 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 35154105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 36260084 - 36260032
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | ||  ||||| |||||||||||||    
T  36260084 tgaagttttgcacttatgtgcaaaatgcccctcaaacttaaaaatttatatta 36260032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 43914653 - 43914601
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||| |||||||||||||| ||||||| | | | |||||||||||||||||    
T  43914653 cttgaaattttgcacttatgtgcaaaatgccccataaacttgaaaatttatat 43914601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 49255811 - 49255863
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  49255811 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 49255863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 50672471 - 50672419
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||| ||||||||||||| | ||||| ||||    
T  50672471 ttatcactgaattgtggagcatattaactaagttttgacgatgtacaaccata 50672419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 53628164 - 53628112
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||||||||||| | |   ||||| |||||||||||||    
T  53628164 tgaagttttgcacttatgttcaaaatgccccccaaacttaaaaatttatatta 53628112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 54602378 - 54602418
Alignment:
Q  308 tgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||||| ||||||||||||||||| ||||||| ||||    
T  54602378 tgtggagcatattagctaagttttgacgatatacaaccata 54602418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 8e-28; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 296 - 383
Target Start/End: Complemental strand, 28538138 - 28538051
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgta 383  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||||||    
T  28538138 ttatcactaaattgtggagcatattagctaagttttgacggtatacaaccatatatgttcctttaaacgatcaaacattaaccatgta 28538051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 11099838 - 11099745
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||| ||| | | ||||||||||||||||||||||||||||    
T  11099838 ttatcactaaattgtggagcatattagctaagttttgacggtatacaaccatatatgctcctttatacgatcaaacattaaccatgtattagag 11099745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 1563840 - 1563756
Alignment:
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||||| |||| |||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||||  |||||||    
T  1563840 aattgtggagcatattagataagttttgacggtatacaaccatatatgttccctgaaccgatcaaacattaaccatccattagag 1563756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 205 - 371
Target Start/End: Complemental strand, 23075272 - 23075118
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcactt 304  Q
    ||||||||||||||||||| ||||||| | | ||||||||||||||||||||         ||||||||| ||||||| |||||| ||| |             
T  23075272 tgaagttttgcacttatgtgcaaaatgccccctgaacttgaaaatttatatt---tttattcttatccttaaaagtgattgcattgtcactg-------- 23075184  T
Q  305 aattgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaac 371  Q
     |||||| ||||| |||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  23075183 -attgtgaagcatattagctaagttttgtcggtatacaaccatatatgttccctgaaacgatcaaac 23075118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 1563923 - 1563876
Alignment:
Q  209 gttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  1563923 gttttgcacttatgtgcaaagtgtcccttgaacttgaaaatttatatt 1563876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 6138304 - 6138253
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| ||| ||||||| ||||||||||||    
T  6138304 tgaagttttgcacttatgtgcaaaatgcctcatgaacttaaaaatttatatt 6138253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 1563136 - 1563188
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||| ||||||| ||||||||||| ||||    
T  1563136 ttatcactgaattgtggagcatattagccaagttttaacggtatacaaccata 1563188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 25404239 - 25404291
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| | | ||||| |||||||||||||    
T  25404239 tgaagttttgcacttatgtgcaaaatgtcccctaaacttaaaaatttatatta 25404291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 28537766 - 28537818
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||| |||||||| ||||||||||||||||| ||||||| ||||    
T  28537766 ttatcactgaattttggagcatattagctaagttttgacgatatacaaccata 28537818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 28537685 - 28537736
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | | | ||||||||||||||||||    
T  28537685 tgaagttttgcacttatgtgcaaaatgccccctaaacttgaaaatttatatt 28537736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 749338 - 749286
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  749338 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 749286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 1050005 - 1050057
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| | ||||||| |  |||||| |||||||||||||    
T  1050005 tgaagttttgcacttatgtgccaaatgtcccccgaacttaaaaatttatatta 1050057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 23066800 - 23066852
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| |||   ||||| |||||||||||||    
T  23066800 tgaagttttgcacttatgtgcaaaatgcctcccaaacttaaaaatttatatta 23066852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 26610371 - 26610319
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  26610371 tgaagttttgcacttatgtgcaaaatgccccctaaacttaaaaatttatatta 26610319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 207 - 389
Target Start/End: Original strand, 1467 - 1639
Alignment:
Q  207 aagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatattannnnnnnncttatccttgaaagtgactgcattatcaatttatcacttaa 306  Q
    |||||||| |||||||| ||||||| | | |||||||||||||||||||          ||||||||| |||||||||||||||||| |         ||    
T  1467 aagttttgtacttatgtgcaaaatgccccctgaacttgaaaatttatat--atttttttcttatccttaaaagtgactgcattatcattg--------aa 1556  T
Q  307 ttgtggagcatgttagctaagttttgacggtatacaatcatacatgttccatgaaacgatcaaacattaaccatgtattagag 389  Q
    ||||||||||| ||||||||||||||||| ||||||| |||| ||||||| | || |||||||||||||||||||||||||||    
T  1557 ttgtggagcatattagctaagttttgacgatatacaaccatatatgttcctttaatcgatcaaacattaaccatgtattagag 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 2242 - 2190
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| ||||||||||||| ||||||||||||||| | ||||||| ||||    
T  2242 ttatcactgaattgtggagcatattagctaagttttgatgatatacaaccata 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 34999 - 34947
Alignment:
Q  203 cttgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    |||||||||||||||||| || ||||||| ||| |||||||||||||||||||    
T  34999 cttgaagttttgcacttacgtgcaaaatgcctcctgaacttgaaaatttatat 34947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 12716 - 12768
Alignment:
Q  296 ttatcacttaattgtggagcatgttagctaagttttgacggtatacaatcata 348  Q
    |||||||| |||||| |||||| ||||||||||||||| ||||||||| ||||    
T  12716 ttatcactgaattgtagagcatattagctaagttttgagggtatacaaccata 12768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 12558 - 12594
Alignment:
Q  154 ttaattaatttaccctctccgtcaaattcttatgtta 190  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  12558 ttaatcaatttaccctctccgtcaaattcttctgtta 12594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 3387 - 3438
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatt 256  Q
    ||||||||||||||||||| ||||||| | |  |||||||||||||||||||    
T  3387 tgaagttttgcacttatgtgcaaaatgccccccgaacttgaaaatttatatt 3438  T

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Target: scaffold0945 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0945
Description:

Target: scaffold0945; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 2152 - 2102
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||| |  | ||||||||||||||||||    
T  2152 tgaagttttgcacttatgtgcaaaatgcccatcgaacttgaaaatttatat 2102  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 46668 - 46718
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||||||||||||| ||||||  |||  ||||||||||||||||||    
T  46668 tgaagttttgcacttatgtgcaaaatacctcccgaacttgaaaatttatat 46718  T

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Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 67274 - 67224
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatat 255  Q
    ||||||||| ||||||||| ||||||| | | |||||||||||||||||||    
T  67274 tgaagttttacacttatgtgcaaaatgacccctgaacttgaaaatttatat 67224  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 52377 - 52429
Alignment:
Q  205 tgaagttttgcacttatgttcaaaatgtctcttgaacttgaaaatttatatta 257  Q
    ||||||||||||||||||| ||||||||| |   ||||| |||||||||||||    
T  52377 tgaagttttgcacttatgtgcaaaatgtcccccaaacttaaaaatttatatta 52429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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