View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13925_low_16 (Length: 344)

Name: NF13925_low_16
Description: NF13925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13925_low_16
NF13925_low_16
[»] chr3 (61 HSPs)
chr3 (3-344)||(4535263-4535605)
chr3 (1-344)||(47883071-47883411)
chr3 (36-321)||(48390444-48390727)
chr3 (4-344)||(11079170-11079507)
chr3 (1-344)||(5858198-5858539)
chr3 (1-143)||(47878360-47878502)
chr3 (1-143)||(10612967-10613109)
chr3 (1-142)||(54193077-54193219)
chr3 (1-340)||(29914142-29914479)
chr3 (1-344)||(54188160-54188502)
chr3 (1-143)||(10896856-10896998)
chr3 (1-141)||(22626173-22626312)
chr3 (1-227)||(27762175-27762396)
chr3 (1-145)||(10949449-10949591)
chr3 (1-240)||(20031507-20031739)
chr3 (208-344)||(10949672-10949809)
chr3 (1-344)||(16461854-16462196)
chr3 (2-143)||(10595224-10595362)
chr3 (161-344)||(4308634-4308817)
chr3 (161-344)||(51727359-51727542)
chr3 (208-344)||(20031743-20031881)
chr3 (1-145)||(38002718-38002862)
chr3 (161-344)||(35918302-35918485)
chr3 (208-344)||(27762419-27762556)
chr3 (1-143)||(6303163-6303303)
chr3 (161-344)||(9604965-9605149)
chr3 (1-143)||(10094263-10094403)
chr3 (1-143)||(10201143-10201283)
chr3 (1-143)||(10208189-10208329)
chr3 (1-115)||(10100280-10100393)
chr3 (161-344)||(25690709-25690892)
chr3 (161-344)||(27101613-27101796)
chr3 (1-143)||(27544125-27544266)
chr3 (1-92)||(3329794-3329886)
chr3 (233-344)||(22627583-22627694)
chr3 (262-344)||(47878598-47878680)
chr3 (264-344)||(54192898-54192978)
chr3 (257-344)||(10595453-10595540)
chr3 (233-344)||(43225828-43225939)
chr3 (262-340)||(29963554-29963632)
chr3 (1-115)||(13893341-13893455)
chr3 (260-344)||(29956218-29956302)
chr3 (260-344)||(30005373-30005457)
chr3 (161-253)||(43228103-43228195)
chr3 (263-344)||(10208448-10208529)
chr3 (26-111)||(7417953-7418037)
chr3 (263-344)||(10100539-10100620)
chr3 (1-132)||(16996737-16996868)
chr3 (262-344)||(10094515-10094597)
chr3 (230-344)||(10201369-10201483)
chr3 (271-344)||(10896656-10896729)
chr3 (1-97)||(26762936-26763031)
chr3 (208-342)||(38002494-38002616)
chr3 (257-321)||(10613221-10613285)
chr3 (280-344)||(10901399-10901463)
chr3 (161-219)||(29956510-29956568)
chr3 (161-219)||(30005665-30005723)
chr3 (271-344)||(45882660-45882733)
chr3 (4-89)||(46966840-46966925)
chr3 (295-344)||(6066241-6066290)
chr3 (14-66)||(27420661-27420713)
[»] chr8 (28 HSPs)
chr8 (1-344)||(21033521-21033863)
chr8 (1-344)||(23179750-23180090)
chr8 (1-344)||(29554974-29555316)
chr8 (1-344)||(9021296-9021637)
chr8 (1-143)||(590645-590787)
chr8 (1-240)||(3276100-3276337)
chr8 (1-344)||(28895154-28895495)
chr8 (208-342)||(3275955-3276090)
chr8 (1-344)||(25684297-25684636)
chr8 (1-143)||(28327761-28327901)
chr8 (1-344)||(4812676-4813017)
chr8 (161-337)||(22685021-22685197)
chr8 (1-92)||(33032556-33032647)
chr8 (3-135)||(2267214-2267346)
chr8 (1-143)||(16752711-16752852)
chr8 (1-92)||(17799613-17799704)
chr8 (1-143)||(16757456-16757597)
chr8 (1-93)||(26268419-26268511)
chr8 (1-143)||(28332484-28332624)
chr8 (1-92)||(30423113-30423205)
chr8 (1-104)||(15944763-15944866)
chr8 (1-97)||(17847576-17847671)
chr8 (233-344)||(16757664-16757775)
chr8 (262-344)||(590467-590549)
chr8 (262-344)||(28327562-28327644)
chr8 (262-344)||(28332285-28332367)
chr8 (1-115)||(15949414-15949527)
chr8 (233-344)||(16752940-16753051)
[»] chr5 (30 HSPs)
chr5 (1-344)||(42237955-42238296)
chr5 (1-344)||(40222415-40222756)
chr5 (1-344)||(1240079-1240421)
chr5 (1-143)||(22672685-22672827)
chr5 (1-143)||(35385641-35385783)
chr5 (1-143)||(2298190-2298332)
chr5 (161-344)||(6747045-6747228)
chr5 (1-115)||(25445370-25445485)
chr5 (1-143)||(25452346-25452488)
chr5 (1-145)||(17841438-17841582)
chr5 (164-344)||(10529457-10529637)
chr5 (161-343)||(39854226-39854408)
chr5 (1-143)||(1170664-1170804)
chr5 (1-92)||(31782646-31782738)
chr5 (161-344)||(6744802-6744985)
chr5 (161-344)||(4409798-4409981)
chr5 (1-139)||(16093479-16093617)
chr5 (2-140)||(11962623-11962759)
chr5 (1-140)||(10627217-10627357)
chr5 (1-115)||(26406662-26406775)
chr5 (208-340)||(17841684-17841816)
chr5 (238-344)||(2298421-2298527)
chr5 (262-344)||(35385879-35385961)
chr5 (233-344)||(22672505-22672616)
chr5 (262-344)||(25452147-25452229)
chr5 (1-111)||(28786289-28786397)
chr5 (1-115)||(25562480-25562592)
chr5 (1-115)||(25837987-25838100)
chr5 (262-344)||(25445220-25445302)
chr5 (262-339)||(1170470-1170547)
[»] chr4 (43 HSPs)
chr4 (1-344)||(4884532-4884867)
chr4 (1-344)||(4556248-4556584)
chr4 (1-344)||(16689129-16689471)
chr4 (1-344)||(25699402-25699742)
chr4 (1-344)||(31300075-31300417)
chr4 (1-344)||(18586617-18586959)
chr4 (1-344)||(8528919-8529260)
chr4 (1-143)||(15830992-15831134)
chr4 (1-143)||(15316809-15316951)
chr4 (1-143)||(16489201-16489342)
chr4 (1-145)||(4569945-4570087)
chr4 (1-105)||(15312205-15312309)
chr4 (1-115)||(16638706-16638820)
chr4 (1-140)||(13072170-13072307)
chr4 (161-341)||(8631778-8631958)
chr4 (1-102)||(55822159-55822258)
chr4 (1-143)||(11853402-11853542)
chr4 (161-344)||(47868196-47868379)
chr4 (257-344)||(16489002-16489089)
chr4 (3-92)||(47566394-47566484)
chr4 (1-93)||(36769379-36769472)
chr4 (257-344)||(15316631-15316718)
chr4 (208-344)||(7050664-7050801)
chr4 (208-299)||(4569751-4569843)
chr4 (257-341)||(15830817-15830901)
chr4 (1-92)||(36771297-36771389)
chr4 (261-344)||(15311995-15312078)
chr4 (257-344)||(40636869-40636956)
chr4 (233-343)||(2485281-2485390)
chr4 (31-92)||(4558212-4558273)
chr4 (1-62)||(7050446-7050507)
chr4 (1-97)||(26557636-26557731)
chr4 (262-344)||(11853203-11853285)
chr4 (260-344)||(6764655-6764739)
chr4 (3-92)||(25614111-25614200)
chr4 (1-97)||(3982367-3982462)
chr4 (80-227)||(7050499-7050641)
chr4 (1-95)||(32274091-32274184)
chr4 (161-219)||(2485230-2485288)
chr4 (161-204)||(6764774-6764817)
chr4 (14-87)||(9022367-9022440)
chr4 (271-344)||(16631069-16631142)
chr4 (1-93)||(4874668-4874760)
[»] chr2 (34 HSPs)
chr2 (1-344)||(38190650-38190990)
chr2 (1-344)||(37170941-37171282)
chr2 (1-344)||(12781410-12781750)
chr2 (1-344)||(20050211-20050553)
chr2 (1-143)||(35894450-35894592)
chr2 (1-143)||(22712705-22712847)
chr2 (1-143)||(30478845-30478987)
chr2 (1-143)||(20054954-20055096)
chr2 (1-143)||(27517828-27517972)
chr2 (1-143)||(17932485-17932627)
chr2 (1-143)||(17943389-17943530)
chr2 (1-344)||(33674594-33674935)
chr2 (1-344)||(22717414-22717755)
chr2 (1-344)||(45567063-45567402)
chr2 (1-143)||(17462289-17462429)
chr2 (1-143)||(39686836-39686976)
chr2 (3-143)||(2736058-2736196)
chr2 (3-143)||(2740794-2740932)
chr2 (1-143)||(39679898-39680038)
chr2 (257-344)||(30478667-30478754)
chr2 (257-344)||(27518063-27518150)
chr2 (262-344)||(22712943-22713025)
chr2 (257-344)||(35894683-35894770)
chr2 (161-288)||(45280340-45280467)
chr2 (271-344)||(17943211-17943284)
chr2 (261-344)||(2740595-2740678)
chr2 (257-344)||(20055212-20055299)
chr2 (262-344)||(2735859-2735941)
chr2 (262-344)||(39679699-39679781)
chr2 (262-344)||(39686637-39686719)
chr2 (1-97)||(33603892-33603987)
chr2 (262-344)||(17462089-17462171)
chr2 (1-93)||(30261962-30262053)
chr2 (208-252)||(21521097-21521141)
[»] chr6 (41 HSPs)
chr6 (1-344)||(22352041-22352385)
chr6 (1-288)||(33215535-33215820)
chr6 (4-341)||(22342993-22343331)
chr6 (1-344)||(26642830-26643169)
chr6 (1-344)||(26748796-26749135)
chr6 (1-344)||(25466088-25466430)
chr6 (1-143)||(17695040-17695182)
chr6 (1-227)||(13467652-13467875)
chr6 (161-344)||(26084726-26084909)
chr6 (1-115)||(3577703-3577817)
chr6 (1-143)||(25941496-25941637)
chr6 (1-344)||(13878381-13878720)
chr6 (1-344)||(13883129-13883468)
chr6 (1-344)||(31248903-31249242)
chr6 (1-344)||(35201515-35201854)
chr6 (161-344)||(26064757-26064940)
chr6 (1-143)||(16785772-16785912)
chr6 (1-143)||(26887413-26887553)
chr6 (161-344)||(28241677-28241859)
chr6 (1-75)||(17035974-17036048)
chr6 (3-139)||(5166007-5166141)
chr6 (1-92)||(19702051-19702143)
chr6 (208-344)||(13467898-13468035)
chr6 (257-344)||(17695294-17695381)
chr6 (261-344)||(1230683-1230766)
chr6 (262-344)||(26887671-26887753)
chr6 (262-344)||(30975145-30975227)
chr6 (262-344)||(30981584-30981666)
chr6 (262-344)||(30987748-30987830)
chr6 (3-62)||(12166337-12166397)
chr6 (262-332)||(25941330-25941400)
chr6 (262-344)||(35209007-35209089)
chr6 (233-344)||(16785573-16785684)
chr6 (1-95)||(24542863-24542956)
chr6 (52-143)||(35208801-35208890)
chr6 (271-344)||(15533146-15533219)
chr6 (161-214)||(1230604-1230657)
chr6 (78-143)||(30974963-30975028)
chr6 (78-143)||(30981402-30981467)
chr6 (78-143)||(30987566-30987631)
chr6 (206-242)||(17696025-17696061)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-143)||(188431-188573)
scaffold0004 (257-344)||(188665-188752)
[»] chr7 (39 HSPs)
chr7 (1-143)||(34547052-34547194)
chr7 (1-143)||(25409982-25410123)
chr7 (1-344)||(42006317-42006656)
chr7 (1-143)||(25351205-25351346)
chr7 (1-143)||(25356899-25357040)
chr7 (1-143)||(7464707-7464849)
chr7 (1-143)||(30246821-30246963)
chr7 (1-143)||(44512714-44512856)
chr7 (1-240)||(44144055-44144290)
chr7 (1-115)||(8378693-8378808)
chr7 (1-140)||(44016850-44016989)
chr7 (208-344)||(44144300-44144437)
chr7 (1-143)||(7069633-7069773)
chr7 (1-143)||(7074640-7074780)
chr7 (1-143)||(25405246-25405386)
chr7 (1-140)||(44010939-44011078)
chr7 (161-343)||(40946076-40946258)
chr7 (1-115)||(15541184-15541297)
chr7 (257-344)||(34547285-34547372)
chr7 (257-344)||(44512969-44513056)
chr7 (1-115)||(3320239-3320352)
chr7 (1-115)||(3324987-3325100)
chr7 (1-94)||(2120798-2120892)
chr7 (1-92)||(21369543-21369635)
chr7 (257-344)||(7464941-7465028)
chr7 (257-344)||(8378861-8378948)
chr7 (257-344)||(30246643-30246730)
chr7 (3-75)||(1099625-1099697)
chr7 (262-344)||(7074441-7074523)
chr7 (257-340)||(25351010-25351093)
chr7 (257-340)||(25356704-25356787)
chr7 (262-344)||(7069434-7069516)
chr7 (262-344)||(25405047-25405129)
chr7 (1-115)||(6067389-6067503)
chr7 (273-339)||(25409809-25409875)
chr7 (262-339)||(3320496-3320573)
chr7 (262-339)||(3325244-3325321)
chr7 (161-219)||(48457525-48457583)
chr7 (3-39)||(1099725-1099761)
[»] chr1 (21 HSPs)
chr1 (1-143)||(9526317-9526459)
chr1 (1-344)||(2393471-2393811)
chr1 (1-140)||(21353535-21353674)
chr1 (1-240)||(25133829-25134064)
chr1 (208-344)||(25133682-25133819)
chr1 (1-115)||(9521593-9521708)
chr1 (204-344)||(2401585-2401725)
chr1 (1-143)||(2232450-2232590)
chr1 (1-140)||(3091295-3091433)
chr1 (1-92)||(4144872-4144963)
chr1 (257-340)||(21353769-21353852)
chr1 (262-344)||(9521368-9521450)
chr1 (161-288)||(13449905-13450032)
chr1 (1-59)||(2401410-2401468)
chr1 (263-344)||(9526118-9526199)
chr1 (260-344)||(2617281-2617365)
chr1 (1-104)||(14996931-14997033)
chr1 (233-344)||(2232263-2232374)
chr1 (274-344)||(23689313-23689383)
chr1 (1-97)||(46783040-46783136)
chr1 (161-219)||(2617384-2617442)
[»] scaffold0209 (2 HSPs)
scaffold0209 (4-143)||(17178-17317)
scaffold0209 (262-344)||(17413-17495)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-344)||(15977-16318)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-143)||(30994-31134)
scaffold0131 (233-343)||(30795-30905)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-140)||(224675-224812)
scaffold0006 (262-321)||(224517-224576)
[»] scaffold0038 (1 HSPs)
scaffold0038 (161-344)||(41839-42021)
[»] scaffold1764 (2 HSPs)
scaffold1764 (39-115)||(1314-1391)
scaffold1764 (261-344)||(1109-1192)
[»] scaffold0552 (2 HSPs)
scaffold0552 (260-344)||(1264-1348)
scaffold0552 (161-204)||(1186-1229)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 3 - 344
Target Start/End: Complemental strand, 4535605 - 4535263
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacact 102  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4535605 gtgaatcaaaacaaacccaaccctagtgttgttgccaagagaaattctctatgaaccctagtttgtatgttggcttctaaaccctgtttttctacacact 4535506  T
Q  103 ttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnn-ttggaacaaatcttcactaaaaatacgttttgtttttatcctcaa 201  Q
    |||||||||||||  || ||||||||||||||||||||||||| |||        ||| |||||||||||||| ||||||||||||||||||||||||||    
T  4535505 ttatcatctgatacaagacttataattatagtggaaagtaaccctttaaacaaaattgaaacaaatcttcactgaaaatacgttttgtttttatcctcaa 4535406  T
Q  202 tcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatc 301  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4535405 tcgtatcatcgtgccacgttacgattcaattgtggcacaatttttccaatgaagatctcagaatcttgtttcaacaatcgtggcacgttgcttctccatc 4535306  T
Q  302 gtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| |  ||||||||||||| |||||||||||||||||||||    
T  4535305 gtgatatgattctccagattcatgattttaagttaactctcac 4535263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 47883071 - 47883411
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||    
T  47883071 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaaatcctg-ttttctacaca 47883169  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
    |||||||||||||||  ||||||||| |||||||||||||||||| ||         ||||||||||||||||| ||||||||||| |||| || || ||    
T  47883170 ctttatcatctgatacaaggcttatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatacgtttatgttattttcttc 47883266  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
    || |||| |||||||||||||||| |||| |||||||||||| ||||||||||||   | |||| |||||||||||||||||||| ||||||||||||||    
T  47883267 aa-cgtaccatcgtgccacgttacaattccattgtggcacgaattttccagtgacttgcatcaggatcttgtttcaacaatcgtgacacgttgcttctcc 47883365  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| |||  ||||||| |||| |||||||||||||||||||||    
T  47883366 atcgtggcacgtttctccaaattcctgattttaagttaactctcac 47883411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 36 - 321
Target Start/End: Original strand, 48390444 - 48390727
Alignment:
Q  36 gccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacactttatcatctgatagtaggcttataattatagtg 135  Q
    ||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  48390444 gccaagagaaattctctataaaccctagtttgtatgtcggcttctaaaccctgtttttctacacactttatcatctgatacgaggcttatatttatagtg 48390543  T
Q  136 gaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtg 235  Q
    |||||||||| ||        ||| |||||||||||||| |||||||||||   || | ||||| |||||| ||||||||||||||||||||| || ||     
T  48390544 gaaagtaaccctt---aaaagttgaaacaaatcttcactgaaaatacgtttctattatttcctccatcgtaccatcgtgccacgttacgattccatcgta 48390640  T
Q  236 gcacgatttttccagtgacgacctc-agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagatt 321  Q
    |||||||||||||||||||  |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  48390641 gcacgatttttccagtgacttcctccagaatcttgcttcaacaattgtggcacgttgcttctccatcgtgacacatttctccagatt 48390727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 4 - 344
Target Start/End: Complemental strand, 11079507 - 11079170
Alignment:
Q  4 tgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacactt 103  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  | | |||||||||    
T  11079507 tgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ctatatacacactt 11079409  T
Q  104 tatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctcaat 202  Q
    ||||||||||||  ||||||||| |||||||||||||||||| ||         | ||| ||||||||||| ||||||||||| |||| || ||||  |     
T  11079408 tatcatctgatacaaggcttatatttatagtggaaagtaaccctt---aaaatatagaataaatcttcactgaaaatacgtttatgttatt-tccttcag 11079313  T
Q  203 cgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatc 301  Q
     ||| ||||||||||||||||||||| || ||||||||| ||||||||||||   | |||| ||||| ||| ||||||||||||||||||||||||||||    
T  11079312 tgtaccatcgtgccacgttacgattccatcgtggcacgaattttccagtgacttgcttcaggatcttttttaaacaatcgtggcacgttgcttctccatc 11079213  T
Q  302 gtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||| |||  |||||||||||  |||||||||||||||||||||    
T  11079212 gtggcacgtttctccagattactgattttaagttaactctcac 11079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 5858539 - 5858198
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5858539 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 5858440  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| |||||||||||||||| |  ||        || |||||||| | ||| ||||||||||||  ||||||| | |    
T  5858439 ctttatcatctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgtttttattttatcttta 5858342  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
         | ||||||| |||| | ||   | || |||||||||  ||||||||  |  ||||||||||||| ||||||||||||||| || |||||||||||    
T  5858341 gcgcgaccatcgtggcacgatgcggggccatcgtggcacgaaatttccagtagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctccat 5858242  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||    
T  5858241 cgtggcacgattctccagattcctgattttaagttaactctcac 5858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 47878360 - 47878502
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47878360 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 47878459  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  47878460 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 47878502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10612967 - 10613109
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10612967 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatttttctacaca 10613066  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||| |||||  ||||||||| ||||||||||||||||    
T  10613067 ctttatcatatgatacaaggcttatatttatagtggaaagtaa 10613109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 54193219 - 54193077
Alignment:
Q  1 aggtgaatcaaaa-caatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54193219 aggtgaatcaaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacac 54193120  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaagta 142  Q
    ||||||||||||||||  ||||||||| |||||||||||||||    
T  54193119 actttatcatctgatacaaggcttatatttatagtggaaagta 54193077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 29914142 - 29914479
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  29914142 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgaatgttggcttctaaaccctgtttttctacaca 29914241  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  29914242 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 29914338  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |||   | ||||||| |||| | ||   | || |||||||||  ||||||||  |  ||   |||||||| ||||||||||||||| || ||||||||||    
T  29914339 aatgcgaccatcgtggcacgatgcggagccatcgtggcacgaaatttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctcca 29914438  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactc 340  Q
    ||||| ||| ||||||||||||  |||||||||||||||||    
T  29914439 tcgtggcacgattctccagatttctgattttaagttaactc 29914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 54188502 - 54188160
Alignment:
Q  1 aggtgaatcaaaa-caatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  54188502 aggtgaatcaaaaacaatcccaaacctagtgttgttgccaagagaaattctctataaaccttagtttgtatgttggtttctaaaccctgtttttctacac 54188403  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    ||||||||| ||||||  ||||||||| |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  54188402 actttatcacctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 54188305  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| |||| | ||  |  || |||||||||    ||||||  |  |||||| |||||| ||||||||||||||| || ||||||||||    
T  54188304 agcgcgaccatcgtggcacgatgcggcttcatcgtggcacgaaaaatccagtagcttcctcaggatcttgcttcaacaatcgtggcgcgatgcttctcca 54188205  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||| ||||||  |||||||||||||||||||||    
T  54188204 tcgtggcacgattcttcagatttctgattttaagttaactctcac 54188160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10896998 - 10896856
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10896998 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatttttctacaca 10896899  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  || ||| |  ||||||||||||||||    
T  10896898 ctttatcatctgatacaagacttgtctttatagtggaaagtaa 10896856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 22626173 - 22626312
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  22626173 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctccataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 22626272  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagt 141  Q
    |||||||||||||||  |||| | || ||||||||||||||    
T  22626273 ctttatcatctgatacaaggc-tgtatttatagtggaaagt 22626312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27762175 - 27762396
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||    
T  27762175 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg--tttctacaca 27762272  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
    |||||||||||||||  || || ||| |||||||||||||||||| ||         ||||||||||||||||| ||||||||||| |||| || ||||     
T  27762273 ctttatcatctgatacaagactaatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatacgtttctgttatt-tcctt 27762368  T
Q  200 aatcgtatcatcgtgccacgttacgatt 227  Q
     | |||| |||| |||||||||||||||    
T  27762369 cagcgtaccatcttgccacgttacgatt 27762396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 10949449 - 10949591
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||  |||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  10949449 aggtgaatcaaaacaatcg-aaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 10949546  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaacc 145  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||    
T  10949547 ctttatcatctgatacaaggcttatatttatagtggaaagtaacc 10949591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 20031507 - 20031739
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||     || ||||||||||||||||||||||||    
T  20031507 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaagcctagtttgtc----ggcttctaaaccctgtttttctacaca 20031602  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  || |||||| ||||||| |||||||| | ||         ||||||||||||||||  |||||||||||   || |||||||     
T  20031603 ctttatcatctgatacaagacttatatttatagtcgaaagtaatcctt---aaaatatggaacaaatcttcacggaaaatacgtttctgttatatcctcc 20031699  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacg 240  Q
    |||||| |||| |||||||||||||||  || ||||||||    
T  20031700 atcgtaccatcatgccacgttacgattacatcgtggcacg 20031739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 10949672 - 10949809
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||||   || ||| ||||||||||||||||||||||||||||||||||||||||| |    
T  10949672 catcgtgccacgttacgattctatcgtggcacgaattttccagtgacttgcttcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggc 10949771  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    ||  |||||||||||| |||||||||||||||||||||    
T  10949772 acgtttctccagattcctgattttaagttaactctcac 10949809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 16462196 - 16461854
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  16462196 aggtgaatcaaaacaatcccaaccctatagttgttgctaagagaaattctctgtaaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 16462097  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgtttt-gtttttatcct 198  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||| ||||||||||||  |||||||| |    
T  16462096 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttattttttatctt 16462000  T
Q  199 caatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
    ||    |  ||||||| |||| | ||  |  || |||||||||||||||||||     ||   |||||||| ||||||||||||||| || |||||||||    
T  16461999 cagcgatgccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctcc 16461900  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| || |||||||||  |||||||||||||||||||||    
T  16461899 atcgtggcacgatactccagatttctgattttaagttaactctcac 16461854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 10595224 - 10595362
Alignment:
Q  2 ggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac 101  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  10595224 ggtgaatcaaaacaatccaaaccctagtgttgttgccaagataaattctctataaaccctagtttgtatgttggtttctaaa-cctttttttctacacac 10595322  T
Q  102 tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
      ||||||||||||  || |||||| ||||||||||||||||    
T  10595323 --tatcatctgatacaagacttatatttatagtggaaagtaa 10595362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 4308634 - 4308817
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||| |||| |||||||||||||||||||||   |       
T  4308634 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtgattgctct 4308733  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||| ||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  4308734 agaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcac 4308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 51727359 - 51727542
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||  | ||||||| |||| | ||||  ||| |||||||||||||||||||||   |  |    
T  51727359 aacaaatcttcaataaaaatacgttttatttttatcttcaatcacaccatcgtggcacgattcgatcaaatcgtggcacgatttttccagtgattgctcc 51727458  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  51727459 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 51727542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 20031743 - 20031881
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacc-tcagaatcttgtttcaacaatcgtggcacgttgc-ttctccatcgtga 305  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  || ||||||||||| ||||||||||||||||| |||| ||||||||||||     
T  20031743 catcgtgccacgttacgattccatcgtggcacgatttttccagtgacttccttcagaatcttgcttcaacaatcgtggcacattgctttctccatcgtgg 20031842  T
Q  306 cacaattctccagattcttgattttaagttaactctcac 344  Q
    |||  |||||||||||  |||||||||||||||||||||    
T  20031843 cacgtttctccagatttctgattttaagttaactctcac 20031881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 38002862 - 38002718
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||| |||| |||||||||||    
T  38002862 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttgacttctaaatcctg-ttttctacaca 38002764  T
Q  101 ctttatcatctgatagtaggc-ttataattatagtggaaagtaacc 145  Q
     | |||||| |||||  |||| ||||| ||||||||||||||||||    
T  38002763 gtgtatcatttgatacaaggctttatatttatagtggaaagtaacc 38002718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 35918302 - 35918485
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||  | |||| |||| |||  ||||||||||||||||  ||  |    
T  35918302 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcactattcgatccaatcgtgctacgatttttccagtgattactcc 35918401  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||| | |  |||||||||||||||||||||    
T  35918402 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccataattctgattttaagttaactctcac 35918485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 27762419 - 27762556
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    ||||||||||||||||||||| || ||||||| | ||||||||||||    | ||| ||||||||||||||||||||||||||||||||||||||||| |    
T  27762419 catcgtgccacgttacgattccatcgtggcacaaattttccagtgacttgtttcaggatcttgtttcaacaatcgtggcacgttgcttctccatcgtggc 27762518  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    ||  |||| ||||||| |||||||||||||||||||||    
T  27762519 acgtttcttcagattcctgattttaagttaactctcac 27762556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6303303 - 6303163
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  6303303 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 6303206  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  6303205 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 6303163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 9604965 - 9605149
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacga-tttttccagtgacgacct 259  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||| | |||||||||||| | ||||||| | ||||||||| ||||||||||||   |      
T  9604965 aacaaatcttcaataaaaatatgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcagtcgtggcacgattttttccagtgattgctc 9605064  T
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||   ||||||||||||  ||| |||||||||| |  |||||||||||||||||||||    
T  9605065 cagaattttgcttcaacaatcgtggcacgaaacttctccatcgtagcacgattctccagaattctgattttaagttaactctcac 9605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10094263 - 10094403
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  10094263 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 10094360  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  10094361 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 10094403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10201143 - 10201283
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  10201143 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 10201240  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  10201241 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 10201283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 10208189 - 10208329
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  10208189 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 10208286  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  10208287 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 10208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 10100280 - 10100393
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  10100280 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 10100377  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  10100378 cttttatcatctgata 10100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 25690709 - 25690892
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||  | |||| ||||  ||||||||||||||||||||   |  |    
T  25690709 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacaattcgatccaatcatggcacgatttttccagtgattgctcc 25690808  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||  ||||||||||||||||||  |||||||||||||| ||| ||||  |||| |  |||||||||||||||||||||    
T  25690809 agaatttttcttcaacaatcgtggcacgaagcttctccatcgtggcacgattcatcagaattctgattttaagttaactctcac 25690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 27101613 - 27101796
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | |||| || |||| | |||| |||| |||||||||||||||||||||      |    
T  27101613 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcttggcacgattcgatccaatcgtggcacgatttttccagtgattgttcc 27101712  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| |||||||||| ||||||    ||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  27101713 agaattttgcttcaacaatcatggcacaaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 27101796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27544266 - 27544125
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctg-tttttctacac 99  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| || |||||||||||    
T  27544266 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgttttttctacac 27544169  T
Q  100 ac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    || ||||||||||||||  |||| | || ||||||||||||||||    
T  27544168 acttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 27544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 3329886 - 3329794
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttg-ttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    ||||||||||||||| |||||||| |||||||  ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  3329886 aggtgaatcaaaacattcccaaccctagtgtttattgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttt 3329794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 233 - 344
Target Start/End: Original strand, 22627583 - 22627694
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||  |  ||||||||||||| |||||||||||||||  | ||||||||||||||| ||| || |||||||||  |||||||||    
T  22627583 gtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgagatgcttctccatcgtggcacgatactccagatttctgattttaa 22627682  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  22627683 gttaactctcac 22627694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 47878598 - 47878680
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  47878598 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 47878680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 54192978 - 54192898
Alignment:
Q  264 atcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  54192978 atcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 54192898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 10595453 - 10595540
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| |  || |||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  10595453 cctcagaatcttgcttcaacaatcgtggcgcaatgtttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 10595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 43225939 - 43225828
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||||   |  |||||| ||| |||||||||||| |||||  |||||||||||||| ||| |||||||||| |  |||||||||    
T  43225939 gtggcacgatttttccagtgattgctccagaattttgcttcaacaatcgtagcacgaagcttctccatcgtggcacgattctccagaattctgattttaa 43225840  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  43225839 gttaactctcac 43225828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 262 - 340
Target Start/End: Original strand, 29963554 - 29963632
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactc 340  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||    
T  29963554 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 29963632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13893455 - 13893341
Alignment:
Q  1 aggtgaatcaaaa-caatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctaca 98  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||| || ||||||||||||| ||| |||||||  ||||||||| || |||||||||    
T  13893455 aggtgaatcaaaaacaatcccaaccctagtgtttgttgccaagagaa-ttctctataaaccctagtttttatgttgacttctaaaccttg-ttttctaca 13893358  T
Q  99 cactttatcatctgata 115  Q
    |||||| |||| |||||    
T  13893357 cactttttcatttgata 13893341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 29956302 - 29956218
Alignment:
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||  |||||||||||||||||| ||| |||||| |  |||||||||||||||||||||    
T  29956302 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 29956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 30005457 - 30005373
Alignment:
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||  |||||||||||||||||| ||| |||||| |  |||||||||||||||||||||    
T  30005457 cagaattttgcttcaacaatcgtggcacgaagcttctccatcgtgacacgattatccagaattctgattttaagttaactctcac 30005373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 253
Target Start/End: Complemental strand, 43228195 - 43228103
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtga 253  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||| |||| |||||||||||||||| ||||    
T  43228195 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttcccgtga 43228103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 10208448 - 10208529
Alignment:
Q  263 aatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  10208448 aatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 10208529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 7418037 - 7417953
Alignment:
Q  26 tagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacactttatcatct 111  Q
    ||||||| ||||||||||||||| | ||||||||||| ||| |||||||| |||||||||| | |||||||||||| | |||||||    
T  7418037 tagtgttattgccaagagaaattctttataaaccctagtttttatgttggcttctaaaccccg-ttttctacacacataatcatct 7417953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 10100539 - 10100620
Alignment:
Q  263 aatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||| |||||| |||||||| || ||||||||||||||| ||| || ||| |||||  |||||||||||||||||||||    
T  10100539 aatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgattttaagttaactctcac 10100620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 16996868 - 16996737
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttg-ttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||||||||||||| | |||||| |||||||  || ||||||||| || ||||||||||||| ||||| |||||| ||||||||| ||| |||||  ||    
T  16996868 aggtgaatcaaaacatttccaaccctagtgtttattaccaagagaa-ttctctataaaccctagtttgtttgttggcttctaaaccttgtgtttcttaac 16996770  T
Q  100 actttatcatctgatagtaggcttataattata 132  Q
    ||||| | ||||||||  ||| ||||| |||||    
T  16996769 acttttttatctgatacaaggtttatatttata 16996737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 10094515 - 10094597
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||| | || |||||||||||||||  || || |||||||||  |||||||||||||||||||||    
T  10094515 gaatcttgcttcaaccatcgtgacgcgatgcttctccatcgtggaacgatactccagatttctgattttaagttaactctcac 10094597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 10201369 - 10201483
Alignment:
Q  230 attgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattt 329  Q
    ||||||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || |||||||||||||||  || || |||||||||  ||||||    
T  10201369 attgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggaacgatactccagatttctgattt 10201468  T
Q  330 taagttaactctcac 344  Q
    |||||||| ||||||    
T  10201469 taagttaaatctcac 10201483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 10896729 - 10896656
Alignment:
Q  271 ttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| |||||||||| || ||||||||||||||| ||| || ||||| |||  |||||||||||||||||||||    
T  10896729 ttcagcaatcgtggcgcgatgcttctccatcgtggcacgatactccatatttctgattttaagttaactctcac 10896656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26763031 - 26762936
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||||||| ||||| ||||| ||||||| ||| ||| |||||||  |||||||| |||| ||||| |||| |||||||||||||||||||||||    
T  26763031 aggtgaatcaaatcaatcacaaccctagtgtttgttcccaggagaaatc-tctataaatcctagtttgt-tgttcgtttctaaaccctgtttttctac 26762936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 342
Target Start/End: Complemental strand, 38002616 - 38002494
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgaca 307  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||||            ||| |||||||||| || || ||||||| |||||| |||||    
T  38002616 catcgtgcaacgttacgattccatcgtggcacgaattttccagtgac------------ttgcttcaacaatcatgacatgttgcttatccatcatgaca 38002529  T
Q  308 caattctccagattcttgattttaagttaactctc 342  Q
    |  |||||||||||  |||||||||||||||||||    
T  38002528 cgtttctccagattactgattttaagttaactctc 38002494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 10613221 - 10613285
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagatt 321  Q
    ||||||||||||| ||||||||||||||  || || |||||||||||| ||| ||||||||||||    
T  10613221 cctcagaatcttgcttcaacaatcgtggtgcgatgtttctccatcgtggcacgattctccagatt 10613285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 10901463 - 10901399
Alignment:
Q  280 cgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  10901463 cgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 10901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 29956568 - 29956510
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacg 219  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  29956568 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacg 29956510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 30005723 - 30005665
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacg 219  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  30005723 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacg 30005665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 45882733 - 45882660
Alignment:
Q  271 ttcaacaatcgtggcacgttgcttctccatcgtgacac-aattctccagattcttgattttaagttaactctcac 344  Q
    |||||| |||||||||||||| |||||||||||| ||| | || | |||| || |||||||||||||||||||||    
T  45882733 ttcaaccatcgtggcacgttgtttctccatcgtggcacgatttttgcaga-tcctgattttaagttaactctcac 45882660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 46966840 - 46966925
Alignment:
Q  4 tgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgt 89  Q
    |||||| |||||||| ||||| ||||||| ||||||||||| |||  |||||||||| ||||||   |||||| |||||||||||||    
T  46966840 tgaatcgaaacaatctcaaccctagtgtttgttgccaagaggaatc-tctataaaccttaattttgttgttggcttctaaaccctgt 46966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 6066241 - 6066290
Alignment:
Q  295 ctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||||| ||||||||| ||||  | |||||||||||||||||||||    
T  6066241 ctccatcgtgccacaattctgcagaaacctgattttaagttaactctcac 6066290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27420713 - 27420661
Alignment:
Q  14 caatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaattt 66  Q
    ||||||||||||||||| |||||||||||| ||||| |||| ||||||||||||    
T  27420713 caatcccaaccatagtgtttgttgccaaga-aaattctctacaaaccctaattt 27420661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 21033863 - 21033521
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21033863 aggtgaatcaaaacaatcccaagcctagtgttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 21033764  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||  ||        || |||||||||||||| |||||||||||| |||||||| |||    
T  21033763 ctttatcatctgatacaaggcttatatttatagtggaaagtaaccccttaaaaaac-tgaaacaaatcttcactgaaaatacgttttatttttatcttca 21033665  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    |||| | ||||||| |||| | ||||||||||||||||||||||||||||||||  | ||| || |||| ||||||||||||||||||||||||||||||    
T  21033664 atcgcaccatcgtggcacgattcgattcaattgtggcacgatttttccagtgactgcttcacaaacttgcttcaacaatcgtggcacgttgcttctccat 21033565  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||| || | ||||||||||||||||||||    
T  21033564 cgtggcacgattctccagtttttagattttaagttaactctcac 21033521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 23179750 - 23180090
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||| |     
T  23179750 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctactct 23179849  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
      || ||||||||||  || |||||| ||||||||||||||| |  ||         ||||||||||||||||| |||||||||||   || | ||||      
T  23179850 tcttttcatctgatacaagacttatatttatagtggaaagtatctcttaaaata---tggaacaaatcttcactgaaaatacgtttcaattatttccttc 23179946  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    | |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  23179947 agcgtaccatcgtgccacgttacgattcaatcgtgacacgatttttccagtgacgacctcagaatcttgtttcaacaatcatagcacgatgcttctccat 23180046  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||  ||| ||||||||||||| |||||||||||||||||||||    
T  23180047 cgtagcacgattctccagattcctgattttaagttaactctcac 23180090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 29554974 - 29555316
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  29554974 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctaaaaaccctagtttgtatgatggtttctaaaccctgtttttctacaca 29555073  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcact-aaaaatacgttttgtttttatcctc 199  Q
    |||||||||||||||  | ||||||| |||||||| ||||||| |  ||        || |||||||| | ||| ||||||||||||| |||||||| ||    
T  29555074 ctttatcatctgatacaacgcttatatttatagtgaaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaaatacgttttatttttatcttc 29555171  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| |||| | |    | || |||||||||  |||||| |  |  ||||||||||||| ||||||||||||||| || ||||||||||    
T  29555172 agcgcgaccatcgtggcacgatgcagggccatcgtggcacgaaatttccaatagctccctcagaatcttgcttcaacaatcgtggcgcgatgcttctcca 29555271  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||  ||| ||||||||||||  |||||||||||||||||||||    
T  29555272 tcgtagcacgattctccagatttctgattttaagttaactctcac 29555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 9021296 - 9021637
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9021296 aggtgaatcaaaacaatccgaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 9021395  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| ||||||| |||||||| |  ||        || |||||||||  ||| ||||||||||||    ||||| |||    
T  9021396 ctttatcatctgatacaaggcttatatttatagt-gaaagtaaacccttaaaaaac-tgaaacaaatctaaactgaaaatacgttttaaaattatcttca 9021493  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
     |  || ||||||| |||  | ||  |  || |||||||||   |||||||  |  ||||||||||||| ||||||||||||| | || |||||||||||    
T  9021494 gtgataccatcgtggcacaatgcggcttcatcgtggcacgaaaattccagtagcttcctcagaatcttgcttcaacaatcgtgacgcgatgcttctccat 9021593  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| |||||||||| |  |||||||||||||||||||||    
T  9021594 cgtggcacgattctccagaattctgattttaagttaactctcac 9021637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 590787 - 590645
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  590787 aggtgaatcaaaacaatcccaacccaagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacact 590688  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||| | ||||||||||||||||    
T  590687 ctttatcatctgatacaaggcttagatttatagtggaaagtaa 590645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3276337 - 3276100
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||| ||||||||||||||||||| | | |||||||| |||| ||||| ||||||||||||| ||| | |||||| ||||||||||||||||||||||||    
T  3276337 aggtaaatcaaaacaatcccaaccctggagttgttgcaaagaaaaattctctataaaccctagtttttgtgttggcttctaaaccctgtttttctacaca 3276238  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    ||||||||||| |||  ||||||||| |||||||| |||||||||  ||       |||||||||||||||||  |||||||||||   || | ||||      
T  3276237 ctttatcatctaatacaaggcttatatttatagtgaaaagtaacctctt--aaaaattggaacaaatcttcacagaaaatacgtttctattatttccttc 3276140  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacg 240  Q
    | |||| ||||||||||||||||||||  || ||||||||    
T  3276139 aacgtaccatcgtgccacgttacgattgcatcgtggcacg 3276100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 28895495 - 28895154
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||     
T  28895495 aggtgaatcaaaacaatctcaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacacc 28895396  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagt-aaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcct 198  Q
    | ||||||||||||||  |||| | || |||||||||||||| |||| |||        || |||||||| | ||| |||||||||||| |||||||| |    
T  28895395 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaaccctttaaaaac--tgaaacaaatc-taactgaaaatacgttttatttttatctt 28895300  T
Q  199 caatcgtatcatcgtgccacgttac-gattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctc 297  Q
    ||     | ||||||| ||||  || | ||| || |||||||||||||||||||  |  ||   |||||||| ||||||||||||||| || |||||||     
T  28895299 caccgcgaccatcgtggcacggcactgcttc-atcgtggcacgatttttccagtagcttcccaggaatcttgcttcaacaatcgtggcgcgatgcttcta 28895201  T
Q  298 catcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||| ||| |||||||| | | || |||||||||||| ||||||    
T  28895200 catcgtggcacgattctccaaaatttttattttaagttaagtctcac 28895154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 208 - 342
Target Start/End: Complemental strand, 3276090 - 3275955
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    |||||||||||||||| |||| || ||||||||||||||| ||||||  ||| |||||||||| ||||||||||||||||| |||||||||||||||| |    
T  3276090 catcgtgccacgttaccattccatcgtggcacgatttttcaagtgacttccttcagaatcttgcttcaacaatcgtggcacattgcttctccatcgtggc 3275991  T
Q  307 acaattctccagattcttgattttaagttaactctc 342  Q
    ||  |||||||||||  |||||||||||||||||||    
T  3275990 acgtttctccagatttctgattttaagttaactctc 3275955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 25684636 - 25684297
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  25684636 aggtgaatcaaaacaatcccaaccctagagttgttgctaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 25684539  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  ||| || || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  25684538 cttttatcatctgatacaagg-ttgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 25684442  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| | || | ||  |  || |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || ||||||||||    
T  25684441 agcgcgaccatcgtggcgcgatgcgtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcca 25684342  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| || |||||||||  |||||||||||||||||||||    
T  25684341 tcgtggcacgatgctccagatttctgattttaagttaactctcac 25684297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28327901 - 28327761
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  28327901 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 28327804  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  28327803 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 28327761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 4812676 - 4813017
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||| ||||||| ||||| |||||||  ||||||| ||||||||||||||    
T  4812676 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctatgaaccctagtttgtttgttggt--ctaaaccttgtttttctacaca 4812773  T
Q  101 cttt-atcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcact--aaaaatacgttttgtttttatcc 197  Q
    |||| |||||||||||  |||||  || |||||||||||||||| |  ||       | | |||||||||  |||  ||||||||||||||||||||||     
T  4812774 cttttatcatctgatacaaggctg-tatttatagtggaaagtaaacccttaaaaaact-gaaacaaatcta-actgaaaaaatacgttttgtttttatct 4812870  T
Q  198 tcaatcgtatcatcgtgccacgtt-acgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttct 296  Q
    |||     | ||||||| | || | | | |||| | |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || |||||||    
T  4812871 tcagcgcgaccatcgtggcgcgatgaggcttca-tcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttct 4812969  T
Q  297 ccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||| || |||||||||  |||||||||||||||||||||    
T  4812970 ccatcgtggcacgatactccagatttctgattttaagttaactctcac 4813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 337
Target Start/End: Original strand, 22685021 - 22685197
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||||| || ||||||| |||||||||||||   |  |    
T  22685021 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgattcgatcgtggcacaatttttccagtgattgctcc 22685120  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaa 337  Q
    ||||| ||| ||||||||||||||||||  |||||| ||||||| ||| ||||| |||| |  ||||||||||||||    
T  22685121 agaattttggttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaa 22685197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33032647 - 33032556
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||||    
T  33032647 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccatgtttt 33032556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 2267214 - 2267346
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac 101  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||||    
T  2267214 gtgaatcaaaacaatctcaaccgtagtgtttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccatg-ttttctacacac 2267312  T
Q  102 tttatcatctgatagtaggcttataattatagtg 135  Q
     |  ||||||||||  ||| ||||| ||||||||    
T  2267313 atattcatctgatacaaggtttatatttatagtg 2267346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16752711 - 16752852
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctg-tttttctacac 99  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| || |||||||||||    
T  16752711 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgttttttctacac 16752808  T
Q  100 ac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    || ||||||||||||||  |||| | || ||||||||||||||||    
T  16752809 acttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 16752852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17799613 - 17799704
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||| |||| |||||||||||| ||||||||||||||||    
T  17799613 aggtgaatcaaaacaatcccaaccctagtgttgttgcctagacaaattctctataaatcctagtttgtatgttggcttctaaaccctgtttt 17799704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 16757456 - 16757597
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctg-tttttctacac 99  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||| ||| ||||||||||||| ||||| ||||||  |||||||| || |||||||||||    
T  16757456 aggtgaatcaaaacaatcccaaccctagagttgttgtcaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgttttttctacac 16757553  T
Q  100 ac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    || ||||||||||||||  |||| | || ||||||||||||||||    
T  16757554 acttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 16757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 26268419 - 26268511
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgttttt 93  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||| |||||||    
T  26268419 aggtgaatcaaaacaatctcaactctagtgttgttgccaagagaaattctctataaaccctagtttgtatgtaggcttctaaaccttgttttt 26268511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28332624 - 28332484
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| |||||| |||||||| ||| | ||||||||||| ||||| | ||||  |||||||| ||||||||||||||    
T  28332624 aggtgaatcaaaacaatcccaaccctagagttgttaccaagagagattctttataaaccctagtttgtttattgg--tctaaaccttgtttttctacaca 28332527  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  28332526 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 28332484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30423205 - 30423113
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| || || ||||||| |||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||||||||    
T  30423205 aggtgaatcaaaacaatctcagccctagtgtttgttgccaagagaaattctctataaaccctagtttgtttgttggcttctaaaccctgtttt 30423113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15944866 - 15944763
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||| |||||  |||| ||||||| ||||||||||||  || ||||||||||||||||||| |||| | |||||||||||||||||| ||||    
T  15944866 aggtgaatcaaagcaatcagaaccctagtgtttgttgccaagagat-ttctctataaaccctaatttgtttgttagcttctaaaccctgtttttccacac 15944768  T
Q  100 acttt 104  Q
    |||||    
T  15944767 acttt 15944763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17847671 - 17847576
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| | |||||||||| || ||||| ||||  |||||||||| |||||||||||    
T  17847671 aggtgaatcaaaacaatcccaaccatagtgtttgttgcctagagaaa-tctctataaaccttagtttgt-tgttcatttctaaaccttgtttttctac 17847576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 344
Target Start/End: Original strand, 16757664 - 16757775
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||  |  ||   |||||||| |||||| |||||||| || ||| ||||||||||| ||| || |||||||||  |||||||||    
T  16757664 gtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctccatcgtggcacgatgctccagatttctgattttaa 16757763  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  16757764 gttaactctcac 16757775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 590549 - 590467
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || |||||||  |||||| ||| || |||||||||  |||||||||||||||||||||    
T  590549 gaatcttgcttcaacaatcgtggcgcgatgcttctttatcgtggcacgatactccagatttctgattttaagttaactctcac 590467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 28327644 - 28327562
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||| | |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  28327644 gaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 28327562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 28332367 - 28332285
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||| | |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  28332367 gaatcttgcttcagccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 28332285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15949527 - 15949414
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||||||| |||||||| ||| | ||||||| ||||  ||||||| || ||| ||||||||| ||||| |||||| || |||||||||||||||  |||    
T  15949527 aggtgaatccaaacaatcacaaacctagtgtttgttgtaaagagaa-ttctctgtaaaccctagtttgtgtgttggcttttaaaccctgtttttcctcac 15949429  T
Q  100 actttatcatctgata 115  Q
    ||||| ||||||||||    
T  15949428 acttt-tcatctgata 15949414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 344
Target Start/End: Original strand, 16752940 - 16753051
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||  |  ||   |||||||| |||||| |||||||| || ||| |||| |||||| ||| || |||||||||  |||||||||    
T  16752940 gtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcctctctatcgtggcacgatgctccagatttctgattttaa 16753039  T
Q  333 gttaactctcac 344  Q
    ||||| ||||||    
T  16753040 gttaagtctcac 16753051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 42238296 - 42237955
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  42238296 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 42238197  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    ||||||||| |||||  ||| ||||| |||||||||||||||||| |||       ||| |||||||||||||| ||||||||||||  |||||||||||    
T  42238196 ctttatcat-tgatacaaggtttatatttatagtggaaagtaaccctttaaaaaa-ttgaaacaaatcttcactgaaaatacgtttttgttttatcctca 42238099  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    |||| | |||||||||||||| |||||  || ||||||||||||||||||||||  | ||| ||||||| ||||||||||||||||||||||||||||||    
T  42238098 atcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcaaaatcttgcttcaacaatcgtggcacgttgcttctccat 42237999  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||||||  |||||||||||||||||||||    
T  42237998 cgtggcacgattctccagatttctgattttaagttaactctcac 42237955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 40222756 - 40222415
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  40222756 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccttgtttttctacaca 40222657  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| |||||||| ||||||| | |||       ||| ||||||| |||||| |||| |||||||  |||||||||||    
T  40222656 ctttatcatctgatacaaggcttatatttatagtg-aaagtaatcctttaaaaaa-ttgaaacaaattttcactgaaaacacgtttttattttatcctca 40222559  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    |||||| |||||||||||||| |||||  || |||||||||||||||| |||||  | ||||||||||| ||||||||||||||||||||||||||||||    
T  40222558 atcgtaccatcgtgccacgttgcgatttcatcgtggcacgatttttcctgtgactgcttcagaatcttgcttcaacaatcgtggcacgttgcttctccat 40222459  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||||||  |||||||||||||||||||||    
T  40222458 cgtggcacgattctccagatttctgattttaagttaactctcac 40222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 1240421 - 1240079
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  1240421 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagagaaaatatctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 1240322  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| ||||||| |||||||||| | |        || ||||||| |||| |||||||||||||| |||||||| |||    
T  1240321 ctttatcatctgatacaaggcttatatttatagtagaaagtaacc-tcttaaaaaactgaaacaaatgttcaataaaaatacgttttatttttatcttca 1240223  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    || | | ||||||| |||| | |||| |||| |||||||||||||||||||||   |  |||||| ||| ||||||||||||||||||  ||||||||||    
T  1240222 attgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtgattgctccagaattttgcttcaacaatcgtggcacgaagcttctccat 1240123  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| |||||||||| |  |||||||||||||||||||||    
T  1240122 cgtggcacgattctccagaattctgattttaagttaactctcac 1240079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 22672827 - 22672685
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22672827 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 22672728  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  |||||| || ||||||||||||||||    
T  22672727 ctttatcatctgatacaaggcttctatttatagtggaaagtaa 22672685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35385641 - 35385783
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||  ||||||||||||||    
T  35385641 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttagtttctaaactttgtttttctacaca 35385740  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||| |||||  ||||||||| ||||||||||||||||    
T  35385741 ctttatcatttgatacaaggcttatatttatagtggaaagtaa 35385783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 2298190 - 2298332
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  2298190 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 2298289  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | |||||||| |||||  |||| | || ||||||||||||||||    
T  2298290 cttttatcatatgatacaaggc-tgtatttatagtggaaagtaa 2298332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 6747228 - 6747045
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||| |||| ||||||||| |||||||||||   |  |    
T  6747228 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgacttttccagtgattgctcc 6747129  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  6747128 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 6747045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25445485 - 25445370
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  25445485 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttatctacaca 25445386  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  25445385 cttttatcatctgata 25445370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25452488 - 25452346
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  25452488 aggtgaatcaaaacaatcccaacgctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 25452389  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | |||||||||| |||  |||| | || ||||||||||||||||    
T  25452388 cttttatcatctaatacaaggc-tgtatttatagtggaaagtaa 25452346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 17841438 - 17841582
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgtt-gccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||| ||||| |||| ||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||||||| |    
T  17841438 aggtgaatcaaaacaatctcaaccctagtattgtttgccaagagaaattctctataaaccctagtttgtatgatggtttctaaaccctg-ttttctacgc 17841536  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaagtaacc 145  Q
    ||||||||||| ||||  ||||||||| |||||||||||| |||||    
T  17841537 actttatcatccgatacaaggcttatatttatagtggaaattaacc 17841582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 10529457 - 10529637
Alignment:
Q  164 aaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcaga 263  Q
    ||||||||| |||||||||||||| |||||||| ||||||| ||||||||| |||| | ||||  ||| |||||||||||||||||||||   |   |||    
T  10529457 aaatcttcaataaaaatacgttttatttttatcttcaatcgcatcatcgtggcacgattcgatctaatcgtggcacgatttttccagtgattgctctaga 10529556  T
Q  264 atcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    || ||| ||||||||||||||||||  ||||||| |||||| ||| |||||||||| |  |||||||||||||||||||||    
T  10529557 attttgcttcaacaatcgtggcacgaagcttctcgatcgtggcacgattctccagaattctgattttaagttaactctcac 10529637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 161 - 343
Target Start/End: Complemental strand, 39854408 - 39854226
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||| | ||||||||  ||| |||||||||||||||||   |  |    
T  39854408 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtgattgctcc 39854309  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctca 343  Q
    ||||| ||| ||||||||||||||||||   |||||| ||| |||||| |||||||||| |  | ||||||||||||||||||    
T  39854308 agaattttgcttcaacaatcgtggcacgaaacttctctatcatgacacgattctccagaattctaattttaagttaactctca 39854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 1170804 - 1170664
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  1170804 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 1170707  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| |||| ||||||| ||||||||    
T  1170706 cttttatcatctgatacaaggc-tatatttatagtagaaagtaa 1170664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31782646 - 31782738
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  31782646 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaaaccctgtttt 31782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 6744985 - 6744802
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||  |||||||||||||| |||||||| ||||||| | ||||||  |||| | |||| |||| |||||||||||||||||||||   |  |    
T  6744985 aacaaatcttcgataaaaatacgttttatttttatcttcaatcgcaccatcgtagcacgattcgatccaatcgtggcacgatttttccagtgattgctcc 6744886  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  | |||||||||||| ||| |||||||||| |  ||||||||| |||||||||||    
T  6744885 agaattttgcttcaacaatcgtggcacgaagtttctccatcgtggcacgattctccagaattctgattttaaattaactctcac 6744802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 4409981 - 4409798
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| ||||||||  | |||| | ||||||| |||| | |||| ||||||||||||||||||||||||||   |  |    
T  4409981 aacaaatcttcaataaaaatacgttttatttttatctgccatcgcaccatcgtggcacgattcgatccaattgtggcacgatttttccagtgattgctcc 4409882  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||| ||||||| ||| ||||| ||||    |||||||||||||||| ||||    
T  4409881 agaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaactctgattttaagttaactttcac 4409798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 16093479 - 16093617
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  16093479 aggtgaatcaaaaagatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacac 16093577  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaa 139  Q
    || | || || |||||  |||  |||| ||||||||||||    
T  16093578 acataattatttgatacaaggtatatatttatagtggaaa 16093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 11962623 - 11962759
Alignment:
Q  2 ggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac 101  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||| || |||||||||||| |||||||||||| |||||||||||     
T  11962623 ggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctatgaaccatagtttgtatgttggcttctaaaccctg-ttttctacacaa 11962721  T
Q  102 tttatcatctgatagtaggcttataattatagtggaaag 140  Q
    | | |||| |||||  ||| ||||| |||||||||||||    
T  11962722 tat-tcatatgatacaaggtttatatttatagtggaaag 11962759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 10627357 - 10627217
Alignment:
Q  1 aggtgaatcaaaa-caatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctaca 98  Q
    ||||||||||||| |||||| |||| ||||||| ||||| |||||||||| ||||||||| ||| |||||||||||| |||||||||||| |||||||||    
T  10627357 aggtgaatcaaaaacaatcctaaccctagtgtttgttgctaagagaaattctctataaacactagtttgtatgttggcttctaaaccctg-ttttctaca 10627259  T
Q  99 cactttatcatctgatagtaggcttataattatagtggaaag 140  Q
    ||| | || ||||||||  ||||||||| |||||||||||||    
T  10627258 cacataataatctgatacaaggcttatatttatagtggaaag 10627217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 26406662 - 26406775
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||| ||||||||||    
T  26406662 aggtgaatcaaaacaatctcaaccctagtgtttgttgccaagagaa-ttctctataaaccctagtttgtttgttggtttctaaaccctg-ttttctacac 26406759  T
Q  100 actttatcatctgata 115  Q
    || || |||| |||||    
T  26406760 acattttcatatgata 26406775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 340
Target Start/End: Original strand, 17841684 - 17841816
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    ||||||||||||||| ||||| || ||||||||| ||||||| ||||   || ||| ||||||||| |||||||||| || |||||||||||||||||||    
T  17841684 catcgtgccacgttatgattccatcgtggcacgaattttccaatgacttgcttcaggatcttgttt-aacaatcgtgacatgttgcttctccatcgtgac 17841782  T
Q  307 acaattctccagattcttgattttaagttaactc 340  Q
    ||  |||||||||||| ||||||||| |||||||    
T  17841783 acgtttctccagattcctgattttaaattaactc 17841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 238 - 344
Target Start/End: Original strand, 2298421 - 2298527
Alignment:
Q  238 acgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaa 337  Q
    ||||||||||||||  |  ||||||||||||| ||||||| ||||||| || ||||||||||||||| ||| || |||||||||  ||||||||||||||    
T  2298421 acgatttttccagtagcttcctcagaatcttgcttcaacagtcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaa 2298520  T
Q  338 ctctcac 344  Q
    |||||||    
T  2298521 ctctcac 2298527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 35385879 - 35385961
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| || ||| |||||  |||||||||||||||||||||    
T  35385879 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgatactctagatttctgattttaagttaactctcac 35385961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 22672616 - 22672505
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||  |||||||| ||  ||||||||||||| ||||||||| ||||| |  ||||| ||||||||| ||| |||||||||| |  | |||||||    
T  22672616 gtggcacgaaatttccagtaactccctcagaatcttgcttcaacaattgtggcgcaatgcttttccatcgtggcacgattctccagaattctaattttaa 22672517  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  22672516 gttaactctcac 22672505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 25452229 - 25452147
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||| |||||||||| || ||||||||||||||| ||| |||||||| |||  | |||||||||||||||||||    
T  25452229 gaatcttgcttcatcaatcgtggcgcgatgcttctccatcgtggcacgattctccatatttctaattttaagttaactctcac 25452147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28786397 - 28786289
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||| || | ||| ||||||  |||||||||||  ||||||| ||||||||||||| ||    
T  28786397 aggtgaatcaaaacaattccaaccctagtgttgttg-caagagaagttctttat-aacccttgtttgtatgttgccttctaaatcctgtttttctacgca 28786300  T
Q  101 ctttatcatct 111  Q
    | || ||||||    
T  28786299 ccttttcatct 28786289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25562480 - 25562592
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||| ||| | || | || ||| |||| ||||||| |||||||| ||||||||||||||||||||||||  |||  ||||||||||    
T  25562480 aggtgaatcaaaacaatctcaatcctaatatttgttcccaaaagaaatt-tctataaatcctaatttgtatgttggtttctaa--ccttattttctacac 25562576  T
Q  100 actttatcatctgata 115  Q
    || || ||||||||||    
T  25562577 acgttttcatctgata 25562592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 25838100 - 25837987
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||| ||||| ||||| ||||| ||||||| |||| |||||||||| || ||| | |||||| ||||||||| || ||||||||||    
T  25838100 aggtgaatcaaaacaatctcaaccctagtgtttgttaccaagag-aattctctataaaccatagtttctttgttggcttctaaaccttg-ttttctacac 25838003  T
Q  100 actttatcatctgata 115  Q
    || || |||| |||||    
T  25838002 acgttttcatatgata 25837987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 25445302 - 25445220
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||| |||||||||| || |||||||||||| ||  || ||||||||||||  | |||||||||||||||||||    
T  25445302 gaatcttgcttcatcaatcgtggcgcgatgcttctccatcatggtacgattctccagatttctaattttaagttaactctcac 25445220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 1170547 - 1170470
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaact 339  Q
    |||||||| |||| | || ||||| || ||||||||||||||| ||| || |||||||||  ||||||||||||||||    
T  1170547 gaatcttgcttcagccattgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaact 1170470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 178; Significance: 6e-96; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 4884867 - 4884532
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||||| ||  ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4884867 aggtgaatcaaaacaatcccacccccagtgttgttgcaaagagaaattctctataaaccctaatttgtatgttggcttctaaaccctgtttttctacaca 4884768  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| ||||| |||||||||||| |||       ||| |||||||||||||| |||||||||||||||||||||||||    
T  4884767 ctttatcatctgatacaaggcttatatttataatggaaagtaaccctttaaaaaaattgaaacaaatcttcactgaaaatacgttttgtttttatcctca 4884668  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
            ||||||||||||| | |||  || ||||||| ||||||||||||||  | | ||||||||| ||||||||||||| ||||||||||||||||    
T  4884667 --------atcgtgccacgttgcaatttcatcgtggcacaatttttccagtgactgctttagaatcttgcttcaacaatcgtgacacgttgcttctccat 4884576  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||||||  |||||||||||||||||||||    
T  4884575 cgtggcacgattctccagatttctgattttaagttaactctcac 4884532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 4556248 - 4556584
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  4556248 aggtgaatcgaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtaagttggtttctaaaccctgtttttctacaca 4556347  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||  ||        || |||||||||||||| |||||||||||| |||||||| |||    
T  4556348 ctttatcatctgatacaaggcttatatttatagtggaaagtaaccccttaaaaaac-tgaaacaaatcttcactgaaaatacgttttatttttatcttca 4556446  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
    |||| | |||||||||||||| |||||  || |||||||||||||||| |      | |||||| ||| ||||||||||||||||| |||||||||||||    
T  4556447 atcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttcctg------cttcagaaacttatttcaacaatcgtggcatgttgcttctccat 4556540  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||| ||||||||| ||   ||||||||||||||||||||    
T  4556541 cgtggcacgattctccagttttcagattttaagttaactctcac 4556584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 16689129 - 16689471
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||| |||| | ||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  16689129 aggtgaatcaaaacaattccaaacctagagttgttgcaaagagaaattatctataaaccctagtttgaatgttggtttctaaaccctgtttttctacaca 16689228  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcact-aaaaatacgttttgtttttatcctc 199  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||  ||       ||| |||||||||||||| |||||||||||||  ||||||||||    
T  16689229 ctttatcatctgatacaaggcttatatttatagtggaaagtaacccctt-aaaaaattgaaacaaatcttcactgaaaaatacgtttttattttatcctc 16689327  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    ||||| | |||||||||||||| |||||  || ||||||||||||||||||||||  | ||| || |||| ||||||||||| || |||  |||||||||    
T  16689328 aatcgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcaaaaacttgcttcaacaatcgcggaacg-agcttctcca 16689426  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||| ||   ||||||||||||||||||||    
T  16689427 tcgtggcacgattctccagttttcagattttaagttaactctcac 16689471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 25699742 - 25699402
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||||||| |||||||||||    
T  25699742 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttttaaaccctg-ttttctacaca 25699644  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
    ||||||||| |||||  || |||||| |||||||||||||||||| ||         ||||||||||||||||  ||||||||||| |||| || ||||     
T  25699643 ctttatcatatgatacaagacttatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcacagaaaatacgtttatgttatt-tcctt 25699548  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
     | |||| |||||||||||||||| |||| || ||| ||||| ||||||||||||   | |||| |||||||||||||||||||||||||||||||||||    
T  25699547 cagcgtaccatcgtgccacgttacaattccatcgtgtcacgaattttccagtgacttgcttcaggatcttgtttcaacaatcgtggcacgttgcttctcc 25699448  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| |||| |||| | ||||| |||||||||||||||||||||    
T  25699447 atcgtggcacatttcttctgattcctgattttaagttaactctcac 25699402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 31300417 - 31300075
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  31300417 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgaatgttggtttctaaaccctgtttttctacaca 31300318  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    ||||||||| |||||  | ||||||| ||||||||||||||||||  ||        || |||||||||||||| |||||||||||| |||||||| |||    
T  31300317 ctttatcatatgatacaaagcttatatttatagtggaaagtaaccccttaaaaaac-tgaaacaaatcttcactgaaaatacgttttatttttatcttca 31300219  T
Q  201 atcgtatcatcgtgccacgttac-gattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
        |  |||||||||||||||| ||||| || |||||||||  ||||||||  |  ||||||||||||| |||||||||||||||  | ||||||||||    
T  31300218 gcaatgccatcgtgccacgttacggattc-atcgtggcacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgtgatgcttctcca 31300120  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  31300119 tcgtggcacgattctccagatttctgattttaagttaactctcac 31300075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 18586959 - 18586617
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  18586959 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatttttctacaca 18586860  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcact-aaaaatacgttttgtttttatcctc 199  Q
    |||||||||||||||  ||||||||| |||||||||||||||| |  ||        || |||||||| | ||| ||||||||||||| |||||||| ||    
T  18586859 ctttatcatctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaaatacgttttatttttatcttc 18586762  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | |||| || |||| | ||  |  || ||||||| |||||||||||  |  ||||||||||||| ||||||||||||||  || ||||||||||    
T  18586761 agcgcgaccatcatggcacgatgcggcttcatcgtggcacaatttttccagtagcttcctcagaatcttgcttcaacaatcgtggtgcgatgcttctcca 18586662  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  18586661 tcgtggcacgattctccagatttctgattttaagttaactctcac 18586617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 8529260 - 8528919
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  8529260 aggtgaatcaaaacaatcccaaccctagtggtgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctatttttctacaca 8529161  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagta-accatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    |||||| ||||||||  | ||||||| ||||||||||||||| ||| ||         || |||||||| | ||| |||||| |||||     |||| ||    
T  8529160 ctttatgatctgatacaaagcttatatttatagtggaaagtataccctt--aaaaaactgaaacaaatc-taactgaaaatatgttttaaaaatatcttc 8529064  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    ||||| | ||||||| |||| | ||  |  || |||||||||||||||||||  |  ||||||||||||| ||||||||||||||| || ||||||||||    
T  8529063 aatcgcaccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctcca 8528964  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||| ||||||||||    |||||||||||||||||||||    
T  8528963 tcgtgacacgattctccagaaatctgattttaagttaactctcac 8528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15831134 - 15830992
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15831134 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagaaaaattttctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 15831035  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  15831034 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 15830992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15316951 - 15316809
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||| |||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15316951 aggtaaatcaaaacaatccgaaccctagtgttgctgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 15316852  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||| |||||||||  ||||||||| ||||||||||||||||    
T  15316851 ctttaccatctgatacaaggcttatatttatagtggaaagtaa 15316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16489342 - 16489201
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  16489342 aggtgaatcaaaacaatctcaaccttagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctg-ttttctacaca 16489244  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| | ||||||||||||||    
T  16489243 ctttatcatctgatacaaggcttatattcatagtggaaagtaa 16489201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4570087 - 4569945
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||| ||| |||||||||||    
T  4570087 aggtgaatcaaaacaatcccaaccctagtgatgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaactctg-ttttctacaca 4569989  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaacc 145  Q
    |||||||||||||||  ||||||||| ||||||| ||||||||||    
T  4569988 ctttatcatctgatacaaggcttatatttatagt-gaaagtaacc 4569945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15312309 - 15312205
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  15312309 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 15312210  T
Q  101 cttta 105  Q
    |||||    
T  15312209 cttta 15312205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16638820 - 16638706
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  16638820 aggtgaatcaaaacaatcccaaccctagtgtttgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacac 16638722  T
Q  100 actttatcatctgata 115  Q
    ||||| ||||||||||    
T  16638721 actttttcatctgata 16638706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13072170 - 13072307
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| || |||||||||||    
T  13072170 aggtgaatcaaaacaatcccaaccctagtgatgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccttg-ttttctacaca 13072268  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaag 140  Q
     | | ||||||||||  ||| |||||  ||||||||||||    
T  13072269 atat-tcatctgatacaaggtttatatctatagtggaaag 13072307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 341
Target Start/End: Original strand, 8631778 - 8631958
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||| ||||  |||||||||||||  |||||      |    
T  8631778 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcttggcacgatttttttagtgattgttcc 8631877  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactct 341  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  ||||||||||||||||||    
T  8631878 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactct 8631958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 55822258 - 55822159
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||| ||||||  |||||||| ||||||||||||||    
T  55822258 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctaatttgtttgttgg--tctaaaccttgtttttctacaca 55822161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11853542 - 11853402
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||| ||| ||||||||||||| ||| | ||||||  |||||||| ||||||||||||||    
T  11853542 aggtgaatcaaaacaatctcaaccctagagttgttgccaagagagattctctataaaccctagtttatttgttgg--tctaaaccttgtttttctacaca 11853445  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  11853444 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 11853402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 47868379 - 47868196
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| |  |||||| |||| |  ||| |||| |||||||||||||||||||||   |  |    
T  47868379 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcactatcgtggcacgattagatccaatcgtggcacgatttttccagtgattgctcc 47868280  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    | ||| ||| ||||||||| ||| ||||  |||||| ||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  47868279 aaaattttgcttcaacaatggtgacacgaagcttcttcatcgtggcacgattctccagaattctgattttaagttaactctcac 47868196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 16489089 - 16489002
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  16489089 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 16489002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 47566484 - 47566394
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||| ||||| ||||||| |||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  47566484 gtgaatcaaaacaatctcaaccctagtgtttgttgccaagataaattctctataaaccctagtttgtatgttggcttctaaaccctgtttt 47566394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 36769472 - 36769379
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgttttt 93  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||  |||||||| |||||||||||| ||||||||| |||||||    
T  36769472 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgttggcttctaaaccttgttttt 36769379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 15316718 - 15316631
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||| | || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  15316718 cctcagaatcttgcttcaacaatcgtgacgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 15316631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 7050664 - 7050801
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    |||||||||||||||| |||| |  ||||||||| ||||||| ||||   || | |  ||||||||||||||||||||||||||||||||| |||||| |    
T  7050664 catcgtgccacgttacaattccaccgtggcacgaattttccaatgacttgcttcggggtcttgtttcaacaatcgtggcacgttgcttctctatcgtggc 7050763  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    ||  |||||||||||| |||||||||| | ||||||||    
T  7050764 acgtttctccagattcctgattttaagctgactctcac 7050801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 4569843 - 4569751
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    ||||||||||||||||||||| ||  |||||||| ||||||||||||   || ||| ||||||||||||||||||||||||||||||||||||    
T  4569843 catcgtgccacgttacgattccatcatggcacgaattttccagtgacttgcttcaggatcttgtttcaacaatcgtggcacgttgcttctcca 4569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 15830901 - 15830817
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactct 341  Q
    ||||||||||||| |||||||||||||||  | ||||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  15830901 cctcagaatcttgcttcaacaatcgtggcgtgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactct 15830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 36771389 - 36771297
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||| |||  |||||||| |||||||||||| ||||||||||| ||||    
T  36771389 aggtgaatcaaaacaatctcaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgttggcttctaaaccctatttt 36771297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 15312078 - 15311995
Alignment:
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||| ||||||||||||||  || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  15312078 agaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 15311995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 40636956 - 40636869
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||| | |  |||||||||||||||||||||    
T  40636956 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaaattctgattttaagttaactctcac 40636869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 2485281 - 2485390
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||||   |  |||||| ||| ||||||||||||||||||  |||||||||||||| ||| ||||||| || || |||||||||    
T  2485281 gtggcacgatttttccagtgattgctccagaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctcctgaatc-tgattttaa 2485379  T
Q  333 gttaactctca 343  Q
    |||||||||||    
T  2485380 gttaactctca 2485390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 4558273 - 4558212
Alignment:
Q  31 ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  4558273 ttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttt 4558212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 7050446 - 7050507
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaacccta 62  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  7050446 aggtgaatcaaaacaatcacaaccttagtgttgttgccaagagaaattctctataaacccta 7050507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26557731 - 26557636
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||| ||||| | || |||||||| ||||||||||||||    
T  26557731 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaa-tctctataaaccctagtttgt-tttttgtttctaatccctgtttttctac 26557636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 11853285 - 11853203
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  11853285 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 11853203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 6764739 - 6764655
Alignment:
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||  |||||| ||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  6764739 cagaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcac 6764655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 25614111 - 25614200
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||| | | ||||||||||| |||||||  |||||||    
T  25614111 gtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccat-agttgtatgttggcttctaaattctgtttt 25614200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3982367 - 3982462
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||| ||||||||| ||||| ||||||| ||||||||||||||| | |||| ||||||| ||||| |||| |||||| |||||| |||||||||    
T  3982367 aggtgaataaaaacaatctcaaccctagtgtttgttgccaagagaaatca-ctatgaaccctagtttgt-tgtttgtttctgaaccctatttttctac 3982462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 7050499 - 7050641
Alignment:
Q  80 taaaccct-gtttttctacacactttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaa-tcttcactaaa 177  Q
    |||||||| ||||||||||||||||||||||    ||  ||||||||| |||||||||||||||||| ||         ||||||||| |||||||||||    
T  7050499 taaaccctagtttttctacacactttatcat----tacaaggcttatatttatagtggaaagtaacccttaaaata---tggaacaaaatcttcactaaa 7050591  T
Q  178 aatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgatt 227  Q
    ||||||||||  || | ||||  | |||| ||||||||||||||||||||    
T  7050592 aatacgtttttgttatttccttcagcgtaccatcgtgccacgttacgatt 7050641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32274091 - 32274184
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttct 95  Q
    |||||||||||||||||| ||||  ||||| |||||||||| ||||| | ||||||||| ||| ||||| |||||| ||||||||| |||||||||    
T  32274091 aggtgaatcaaaacaatctcaactctagtgtttgttgccaatagaaa-tctctataaactctagtttgt-tgttggcttctaaaccttgtttttct 32274184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 2485230 - 2485288
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacg 219  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  2485230 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacg 2485288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 6764817 - 6764774
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcg 204  Q
    |||||||||||| |||||||||||||| |||||||| |||||||    
T  6764817 aacaaatcttcaataaaaatacgttttatttttatcttcaatcg 6764774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 9022440 - 9022367
Alignment:
Q  14 caatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccct 87  Q
    ||||||||||||||||| ||||||||||||| |||| |||| |||||||| |||  ||||||  |||||||||||    
T  9022440 caatcccaaccatagtgtttgttgccaagag-aattctctacaaaccctagttttgatgttgacttctaaaccct 9022367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 16631142 - 16631069
Alignment:
Q  271 ttcaacaatcgtggcacgttgcttctccatcgtgacac-aattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||||||||||||||||  |||||| ||| | || ||||||  | |||||||||||||||||||||    
T  16631142 ttcaacaatcgtggcacgttgcttctgaatcgtggcacgatttttccaga-acctgattttaagttaactctcac 16631069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 4874668 - 4874760
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgttttt 93  Q
    |||||||||||||||| ||||||  ||||| |||||| | |||| |||| ||| |||| |||| ||||| |||||| ||||||||| |||||||    
T  4874668 aggtgaatcaaaacaaacccaactctagtgtttgttgtctagag-aattctctttaaatcctagtttgtttgttggcttctaaaccttgttttt 4874760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 162; Significance: 2e-86; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 38190990 - 38190650
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  38190990 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattatttataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 38190892  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa-ccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcct 198  Q
    |||||||||||||||  || |||||| |||||||||||||||| |||| |        ||||||||||||||||| ||||||||||| |||| || ||||    
T  38190891 ctttatcatctgatacaagacttatatttatagtggaaagtaacccatataata----tggaacaaatcttcactgaaaatacgtttctgttatt-tcct 38190797  T
Q  199 caatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctc 297  Q
      | |||| ||||||||||||||||||||  || ||||||||| ||||||||||||   | |||| ||||||||||||||||||||||||||||||||||    
T  38190796 tcagcgtaccatcgtgccacgttacgattacatcgtggcacgaattttccagtgacttgcttcaggatcttgtttcaacaatcgtggcacgttgcttctc 38190697  T
Q  298 catcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||| |||  ||||||| |||| ||||||||| |||||||||||    
T  38190696 catcgtggcacgtttctccatattcctgattttaaattaactctcac 38190650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 37170941 - 37171282
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37170941 aggtgattcaaaacaatcccaaccctggtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 37171040  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||| ||||| |||||||||||||||||| ||         ||||||||||||||||| ||||||||||||  || | ||||      
T  37171041 ctttatcatctgatacaaggtttatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatacgtttttgttatttccttc 37171137  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    | || | ||||||||||||||||||||| || ||||||||| |||| || ||||   | |||| ||||||||||||||||| ||||||||||||||||||    
T  37171138 agcgcaccatcgtgccacgttacgattccatcgtggcacgaatttttcaatgacttgcttcaggatcttgtttcaacaatcatggcacgttgcttctcca 37171237  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| |||  |||||||||||| | |||||||||||||||||||    
T  37171238 tcgtggcacgtttctccagattccttattttaagttaactctcac 37171282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 12781410 - 12781750
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  12781410 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgaatgttggtttctaaaccctg-ttttctacaca 12781508  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| |||    
T  12781509 ctttatcatctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttca 12781606  T
Q  201 atcgtatcatcgtgccacgttac-gattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
        |  |||||||||||| ||| |  || || ||| |||||  ||||||||  |  ||||||||||||| ||||||||||||||| || ||||||||||    
T  12781607 gcgatgccatcgtgccacgatacagggtc-atcgtgccacgaaatttccagtagcttcctcagaatcttgcttcaacaatcgtggcgcgatgcttctcca 12781705  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||| ||||||||  |||||||||||||||||||||    
T  12781706 tcgtggcacgattatccagatttctgattttaagttaactctcac 12781750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 20050211 - 20050553
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  20050211 aggtgaatcaaaacaatcccaaccctagagttgttgcaaagagaaattttctataaaccctagtttgtatgttggtttctataccctgtttttctacaca 20050310  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| |||||||||||||||| |  ||        || |||||||||| ||| ||||||||||||     |||| |||    
T  20050311 ctttatcatctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatctttactgaaaatacgttttaaaagtatcttca 20050409  T
Q  201 -atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
       |||  ||||||| |||||| ||  |  || |||||||||   |||||||  |  ||||||||||||| | |||||||||||||||| ||||||||||    
T  20050410 gcgcgt-ccatcgtggcacgttgcggcttcatcgtggcacgaaaattccagtagcttcctcagaatcttgctgcaacaatcgtggcacgatgcttctcca 20050508  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||    
T  20050509 tcgtggcacgattctccagaattttgattttaagttaactctcac 20050553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35894450 - 35894592
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35894450 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 35894549  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  35894550 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 35894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22712705 - 22712847
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22712705 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 22712804  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  22712805 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 22712847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30478987 - 30478845
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  30478987 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaactctgtttttctacaca 30478888  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  30478887 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 30478845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 20054954 - 20055096
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  20054954 aggtgaatcaaaacaatcccaaccctagagttgttgcaaagagaaattctctataaaccttagtttgtatgttggtttctataccctgtttttctacaca 20055053  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  20055054 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 20055096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27517828 - 27517972
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttct--aca 98  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  27517828 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 27517927  T
Q  99 cactttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||| |||||  ||||||||| ||||||||||||||||    
T  27517928 cactttatcatttgatacaaggcttatatttatagtggaaagtaa 27517972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17932627 - 17932485
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17932627 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttataaaccctgtttttctacaca 17932528  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  17932527 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 17932485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17943530 - 17943389
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |||||||||||| |||||||||||  |||||||||||    
T  17943530 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccatagtttgtatgttggcttctaaaccct-attttctacaca 17943432  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | |||||||||||||  ||||||||| ||||||||||||||||    
T  17943431 ccttatcatctgatacaaggcttatatttatagtggaaagtaa 17943389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 33674594 - 33674935
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  33674594 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccatagtttatatgttggtttctaaaccctgtttttctacaca 33674693  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  || | | || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| ||||||||  |    
T  33674694 cttttatcatctgatacaagac-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatctac 33674790  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| ||||  |||  |  || |||||||||||||||||||  |  ||   |||||||  ||||||||||||||| || | ||||||||    
T  33674791 agcgcgaccatcgtggcacgacacggcttcatcgtggcacgatttttccagtagcttcccaggaatcttacttcaacaatcgtggcgcgatacttctcca 33674890  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| |||||| |||||  |||||||||||||||||||||    
T  33674891 tcgtggcacgattctctagatttctgattttaagttaactctcac 33674935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 22717414 - 22717755
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  22717414 aggtgaatcaaaacaatcccaaccctatagttgttgctaagagaaattctctgtaaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 22717513  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  22717514 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 22717610  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |    |  ||||||| |||| | ||  |  || |||||||||||||||||||     ||   |||||||| ||||||||||||||| || ||||||||||    
T  22717611 agcgatgccatcgtggcacgatgcggcttcatcgtggcacgatttttccagtagtttcccaggaatcttgcttcaacaatcgtggcgcgatgcttctcca 22717710  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| || || ||||||  |||||||||||||||||||||    
T  22717711 tcgtggcacgatacttcagatttctgattttaagttaactctcac 22717755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 45567402 - 45567063
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  45567402 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 45567305  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | |||||||||||||||| |||||||| ||    
T  45567304 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttataaaac-tgaaacaaatc-taactaaaaatacgttttatttttatcttc 45567208  T
Q  200 aatcgtatcatcgtgccacg-ttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
    |     | ||||||| | || | | | ||| || |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || |||||||||    
T  45567207 agcgcgaccatcgtggcgcgatgaggcttc-atcgtggcacgaaatttccagtgtctgcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcc 45567109  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| || |||||||||  ||||||||||||||| |||||    
T  45567108 atcgtggcacgatgctccagatttctgattttaagttaacgctcac 45567063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17462429 - 17462289
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  17462429 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 17462332  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  17462331 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 17462289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 39686976 - 39686836
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  39686976 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 39686879  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  39686878 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 39686836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 2736196 - 2736058
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac- 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| |||||||||||||||     
T  2736196 gtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacacact 2736099  T
Q  102 tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||||||  |||| | || ||||||||||||||||    
T  2736098 tttatcatctgatacaaggc-tgtatttatagtggaaagtaa 2736058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 2740932 - 2740794
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac- 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| |||||||||||||||     
T  2740932 gtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacacact 2740835  T
Q  102 tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||||||  |||| | || ||||||||||||||||    
T  2740834 tttatcatctgatacaaggc-tgtatttatagtggaaagtaa 2740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 39680038 - 39679898
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| ||| ||||||||||||| ||||| ||||||||  |||||| ||||||||||||||    
T  39680038 aggtgaatcaaaacaatcccaaccctagagttgttgccaaaagagattctctataaaccctagtttgtttgttggtt--taaaccttgtttttctacaca 39679941  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  39679940 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 39679898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 30478754 - 30478667
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  30478754 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 30478667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 27518063 - 27518150
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||| ||||||||| || ||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  27518063 cctcagaatcttgcttcaaaaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattttgattttaagttaactctcac 27518150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 22712943 - 22713025
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  22712943 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 22713025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 35894683 - 35894770
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||   ||||||||||||| |  |||||||||||||||||||||    
T  35894683 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagtacaattctccagaattctgattttaagttaactctcac 35894770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 45280340 - 45280467
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| |||| | |||| |||| ||||||||||||||  |||||   |  |    
T  45280340 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttttagtgattgctcc 45280439  T
Q  261 agaatcttgtttcaacaatcgtggcacg 288  Q
    ||||| ||| ||||||||||||||||||    
T  45280440 agaattttgcttcaacaatcgtggcacg 45280467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 271 - 344
Target Start/End: Complemental strand, 17943284 - 17943211
Alignment:
Q  271 ttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  17943284 ttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 17943211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 2740678 - 2740595
Alignment:
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  2740678 agaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 2740595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 20055212 - 20055299
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||  || ||||||||||||||| ||  |||||||||| |  |||||||||||||||||||||    
T  20055212 cctcagaatcttgcttcaacaatcgtggtgcgatgcttctccatcgtggcatgattctccagaattctgattttaagttaactctcac 20055299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 2735941 - 2735859
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  2735941 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 2735859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 39679781 - 39679699
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  39679781 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 39679699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 39686719 - 39686637
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  39686719 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 39686637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 33603987 - 33603892
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||||||||||||||||||| || || |||||||||| ||||| | ||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  33603987 aggtgaatcaaaacaatcccaaccctaatgtttgttgccaaaagaaa-tctctataaaccctagtttgt-tgtttgtttctaaaccatgtttttctac 33603892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 17462171 - 17462089
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||| | |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  17462171 gaatcttgcttcatccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 17462089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 30261962 - 30262053
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgttttt 93  Q
    |||||||||||||||||| ||||| ||||| || |||||||||||||   |||||||||| || ||||| |||||| ||||||||| |||||||    
T  30261962 aggtgaatcaaaacaatctcaaccctagtgtttattgccaagagaaa-actctataaaccgtagtttgt-tgttggcttctaaaccatgttttt 30262053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 21521097 - 21521141
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtg 252  Q
    |||||||||||||| |||| | || ||||||||||||||||||||    
T  21521097 catcgtgccacgttgcgatcccatcgtggcacgatttttccagtg 21521141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 156; Significance: 8e-83; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 22352041 - 22352385
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  22352041 aggtgattcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 22352140  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa-ccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    |||||||||||||||  ||| ||||| |||||||||||||||| || ||         || |||||||||||| ||||||||||||||||||||||| ||    
T  22352141 ctttatcatctgatacaaggtttatatttatagtggaaagtaaccccttaaaaaaaactgaaacaaatcttcaataaaaatacgttttgtttttatcttc 22352240  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    ||||| | ||||||| |||| | |||| |||| ||||||| |||||||||||||   |  |||||| ||| ||||||||||||||||||  |||||||||    
T  22352241 aatcgcaccatcgtggcacgattcgatccaatcgtggcacaatttttccagtgaatgctccagaattttgattcaacaatcgtggcacgaagcttctcca 22352340  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    | ||  ||| |||||| ||| | | ||||||||||||||||||||    
T  22352341 ttgtagcacgattctctagaatttagattttaagttaactctcac 22352385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 33215820 - 33215535
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||| ||||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  33215820 aggtgaatcaaaacaatcacaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaactctgtttttctacaca 33215721  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    ||||||||||||| |  ||||||||| ||||||| ||||||||||  ||       |||||||||||||||||| |||||||||||   |||||||||||    
T  33215720 ctttatcatctgacacaaggcttatatttatagt-gaaagtaacccctt-taaaaattggaacaaatcttcactgaaaatacgtttctgttttatcctca 33215623  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacg 288  Q
    || ||| |||||||||||||| |||||  || ||||||||||||||||||||||  | ||||||||||  ||||||||||||||||||    
T  33215622 atggtaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtgactgcttcagaatctttcttcaacaatcgtggcacg 33215535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 4 - 341
Target Start/End: Original strand, 22342993 - 22343331
Alignment:
Q  4 tgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacactt 103  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  22342993 tgaatcaaaacaatctcaaccctagtgttgttgccaagagagattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacacactt 22343092  T
Q  104 tatcatctgatagtaggcttataattatagtggaaagtaa-ccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctcaat 202  Q
    |||||| |||||  ||||||||| |||||| ||||||||| || ||         || |||||||||||| ||||||||||||||||||||||| |||||    
T  22343093 tatcatatgatacaaggcttatatttataggggaaagtaaccccttaaaaaaaactgaaacaaatcttcaataaaaatacgttttgtttttatcttcaat 22343192  T
Q  203 cgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcg 302  Q
    || | |||||||  ||| |  ||| |||| ||||||||||||||||| |||   |  |||| | ||| ||||||||||||||||||  ||||||||||||    
T  22343193 cgcaccatcgtggtacgatttgatccaatcgtggcacgatttttccaatgaatgctccagagttttgcttcaacaatcgtggcacgaagcttctccatcg 22343292  T
Q  303 tgacacaattctccagattcttgattttaagttaactct 341  Q
    || |   |||||||||| |  ||||||||||||||||||    
T  22343293 tggcttgattctccagaattctgattttaagttaactct 22343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 26643169 - 26642830
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||| |||  |     
T  26643169 aggtgaatcaaaacaatcccaaccctagtgttgtgggcaagagaaattctctataaaccctagtttgtatgttggcttctaaaccttgtttt-ctattct 26643071  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
     ||| ||||||||||  || |||||| |||||||||||||||||| ||         ||||| |||||||| || ||||||||||| |||| ||  | ||    
T  26643070 gtttctcatctgatacaagacttatatttatagtggaaagtaacccttaaaata---tggaataaatcttccctgaaaatacgtttctgttatttccttc 26642974  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    || |||| ||||||||||||||||||||| || || ||||||  |||||||||||  | |||||||||||||||||||||||| ||||||| ||||||||    
T  26642973 aa-cgtaccatcgtgccacgttacgattccatcgttgcacgaagtttccagtgactgcttcagaatcttgtttcaacaatcgttgcacgttccttctcca 26642875  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| |||  |||||||||||| |||||||||||||||||||||    
T  26642874 tcgtggcacgtttctccagattcctgattttaagttaactctcac 26642830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 26749135 - 26748796
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||||| |||||||||||| ||||||||| |||||| |||  |     
T  26749135 aggtgaatcaaaacaatcccaaccctagtgttgtgggcaagagaaattctctataaaccctagtttgtatgttggcttctaaaccttgtttt-ctattct 26749037  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
     ||| ||||||||||  || |||||| |||||||||||||||||| ||         ||||| |||||||| || ||||||||||| |||| ||  | ||    
T  26749036 gtttctcatctgatacaagacttatatttatagtggaaagtaacccttaaaata---tggaataaatcttccctgaaaatacgtttctgttatttccttc 26748940  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    || |||| ||||||||||||||||||||| || || ||||||  |||||||||||  | |||||||||||||||||||||||| ||||||| ||||||||    
T  26748939 aa-cgtaccatcgtgccacgttacgattccatcgttgcacgaagtttccagtgactgcttcagaatcttgtttcaacaatcgttgcacgttccttctcca 26748841  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| |||  |||||||||||| |||||||||||||||||||||    
T  26748840 tcgtggcacgtttctccagattcctgattttaagttaactctcac 26748796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 25466088 - 25466430
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25466088 aggtgaatcaaaacaatctcaaccttagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 25466187  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctca 200  Q
    |||||||||||||||  ||||||||| |||||||||||||||| |  ||        || |||||||||   || ||| |||||||| |||||||| |||    
T  25466188 ctttatcatctgatacaaggcttatatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatctatgctgaaagtacgttttatttttatcttca 25466286  T
Q  201 atcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccat 300  Q
        || ||||||| || | | ||  |  || |||||||||  ||||||||  |  ||| ||||||||| ||||||||| |||||||| |||||||||||    
T  25466287 gcgataccatcgtggcatgatgcggcttcatcgtggcacgaaatttccagtagcttccttagaatcttgcttcaacaattgtggcacgatgcttctccat 25466386  T
Q  301 cgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||| ||  |||||| |||||  |||||||||||||||||||||    
T  25466387 cgtggcatgattctctagatttctgattttaagttaactctcac 25466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 17695040 - 17695182
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17695040 aggtgaatcaaaacaatcccaaccctagttttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 17695139  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  17695140 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 17695182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 13467652 - 13467875
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  13467652 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagataaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 13467751  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||| ||         | ||||||||||||||| ||||||||||| |||| || ||||     
T  13467752 ctttatcatttgatacaaggcttatatttatagtggaaagtaaccctt---aaaatatagaacaaatcttcactgaaaatacgtttatgttatt-tcctt 13467847  T
Q  200 aatcgtatcatcgtgccacgttacgatt 227  Q
     | |||| ||||||||||||||||||||    
T  13467848 cagcgtaccatcgtgccacgttacgatt 13467875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 26084909 - 26084726
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||| | ||||||||| |||||||||||||||||||||   |  |    
T  26084909 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtgattgctcc 26084810  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  26084809 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 26084726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3577703 - 3577817
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3577703 aggtgaatcaaaacaatcccaaccctagtgttgttgcaaagagaaattctctataaaccctagtttgtatgttggtttttaaaccctgtttttctacaca 3577802  T
Q  101 ctttatcatctgata 115  Q
    |||||||||||||||    
T  3577803 ctttatcatctgata 3577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25941637 - 25941496
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| ||||||| ||||| |||| ||||||||||||||||| ||||||||||||||    
T  25941637 aggtgaatcaaaacaatcccaaccctagagttgttaccaagagaaattctctataa-ccctagtttgaatgttggtttctaaaccatgtttttctacaca 25941539  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  25941538 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 25941496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 13878720 - 13878381
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  13878720 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 13878623  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  13878622 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttataaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 13878526  T
Q  200 aatcgtatcatcgtgccacgttac-gattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
    |     | ||||||| ||||   | | ||| || |||||||||||||||||||  |  ||   |||||||| |||||| |||||||| || |||||||||    
T  13878525 agcgcgaccatcgtggcacgaccctgcttc-atcgtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcc 13878427  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||| || ||| || |||||||||  |||||||||||||||||||||    
T  13878426 atcatggcacgatgctccagatttctgattttaagttaactctcac 13878381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 13883468 - 13883129
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  13883468 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 13883371  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||| |||||||||||| |||||||| ||    
T  13883370 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactgaaaatacgttttatttttatcttc 13883274  T
Q  200 aatcgtatcatcgtgccacg-ttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
    |     | ||||||| | || | | | ||| || |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || |||||||||    
T  13883273 agcgcgaccatcgtggcgcgatgaggcttc-atcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcc 13883175  T
Q  299 atcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| || |||||||||  |||||||||||||||||||||    
T  13883174 atcgtggcacgatactccagatttctgattttaagttaactctcac 13883129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 31248903 - 31249242
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||    
T  31248903 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttggt--ctaaaccttgtttttctacaca 31249000  T
Q  101 cttt-atcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    |||| |||||||||||  |||||  || |||||||||||||||| |  ||       | | |||||||||  ||| |||||||||||| |||||||| ||    
T  31249001 cttttatcatctgatacaaggctg-tatttatagtggaaagtaaacccttaaaaaact-gaaacaaatcta-actgaaaatacgttttatttttatcttc 31249097  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| | || |  |  |  || |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || ||||||||||    
T  31249098 agcgcgaccatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcca 31249197  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| || |||||||||  |||||||||||||||||||||    
T  31249198 tcgtggcacgatactccagatttctgattttaagttaactctcac 31249242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 35201515 - 35201854
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| |||||||  ||||||| ||||||||||||||    
T  35201515 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttggt--ctaaaccttgtttttctacaca 35201612  T
Q  101 cttt-atcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    |||| |||||||||||  |||||  || |||||||||||||||| |  ||       | | |||||||||  ||| |||||||||||| |||||||| ||    
T  35201613 cttttatcatctgatacaaggctg-tatttatagtggaaagtaaacccttaaaaaact-gaaacaaatcta-actgaaaatacgttttatttttatcttc 35201709  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| | || |  |  |  || |||||||||  ||||||||| |  ||   |||||||| |||||| |||||||| || ||||||||||    
T  35201710 agcgcgaccatcgtggcgcgatgagtcttcatcgtggcacgaaatttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctcca 35201809  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| || |||||||||  |||||||||||||||||||||    
T  35201810 tcgtggcacgatactccagatttctgattttaagttaactctcac 35201854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 344
Target Start/End: Complemental strand, 26064940 - 26064757
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||  |||| |||||| |||| ||| ||||| ||||  |||||   |  |    
T  26064940 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtaacacgatacgatacaatcgtgacacgaattttaaagtgattgctcc 26064841  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  26064840 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 26064757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 16785912 - 16785772
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  16785912 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 16785815  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||| ||  |||| | || ||||||||||||||||    
T  16785814 cttttatcatctgctacaaggc-tgtatttatagtggaaagtaa 16785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26887413 - 26887553
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| |||||||||||||     
T  26887413 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacacg 26887510  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  26887511 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 26887553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 28241677 - 28241859
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    ||||||| |||| |||||||||||||| |||||||| ||||||| |  |||||| |||| | |||| |||| ||||||||||||||||||||    || |    
T  28241677 aacaaattttcaataaaaatacgttttatttttatcttcaatcgcactatcgtggcacgattcgatacaatcgtggcacgatttttccagtgtttgcc-c 28241775  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||  ||| | ||||||||||||||||  |||||||||||||| ||| ||||| |||| |  |||||||||||||||||||||    
T  28241776 agaactttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcac 28241859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17036048 - 17035974
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttgg 75  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17036048 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttgg 17035974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 5166007 - 5166141
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacact 102  Q
    ||||||||||||| |||||||| |||| || |||||  |||||||| |||||||||||||  ||||||||||| |||||||||||| ||||||||||||     
T  5166007 gtgaatcaaaaca-tcccaaccctagtattcttgccttgagaaattctctataaaccctagcttgtatgttggcttctaaaccctg-ttttctacacaca 5166104  T
Q  103 ttatcatctgatagtaggcttataattatagtggaaa 139  Q
    | |||||||||||  || |||||| ||||||||||||    
T  5166105 taatcatctgatacaagacttatatttatagtggaaa 5166141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 19702051 - 19702143
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||| |||||||||||| ||||||||| ||||||    
T  19702051 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacgctagtttgtatgttggcttctaaaccttgtttt 19702143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 13467898 - 13468035
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    |||||||||||||||| |||| || ||||||||| ||||| ||||||   || | | |||||| ||||||||||||||||||||||||||||||||||      
T  13467898 catcgtgccacgttactattccatcgtggcacgaattttctagtgacttgcttctggatcttgcttcaacaatcgtggcacgttgcttctccatcgtggt 13467997  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    |   ||||||| |||| |||||||||||||||||||||    
T  13467998 atgtttctccaaattcctgattttaagttaactctcac 13468035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 17695294 - 17695381
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  17695294 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 17695381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 261 - 344
Target Start/End: Original strand, 1230683 - 1230766
Alignment:
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||||||||  |||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  1230683 agaattttgcttcaacaatcgtggcacgaagcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 1230766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 26887671 - 26887753
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  26887671 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 26887753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 30975145 - 30975227
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  30975145 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 30975227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 30981584 - 30981666
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  30981584 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 30981666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 30987748 - 30987830
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  30987748 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 30987830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 12166337 - 12166397
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaacccta 62  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  12166337 gtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacccta 12166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 332
Target Start/End: Complemental strand, 25941400 - 25941330
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||    
T  25941400 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaa 25941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 35209007 - 35209089
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||| ||| ||| || |||||||||  |||||||||||||||||||||    
T  35209007 gaatcttgcttcaaccatcgtggcgcgatgcttctccattgtggcacgatactccagatttctgattttaagttaactctcac 35209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 16785684 - 16785573
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    ||||||| |||||||||||| |  ||   |||||||| |||||| |||||||| || ||||| || |||||| ||| || |||||||||  |||||||||    
T  16785684 gtggcacaatttttccagtgtcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttttcgatcgtggcacgatgctccagatttctgattttaa 16785585  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  16785584 gttaactctcac 16785573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24542863 - 24542956
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttct 95  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| || ||||  |||||| ||||||||| | |||||||    
T  24542863 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaa-tctctataaaccatagtttg-gtgttggcttctaaaccttatttttct 24542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 143
Target Start/End: Original strand, 35208801 - 35208890
Alignment:
Q  52 tataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||| ||||| |||||||  ||||||| ||||||||||||||| ||||||||||||||  |||| | || ||||||||||||||||    
T  35208801 tataaaccctagtttgtttgttggt--ctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 35208890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 344
Target Start/End: Original strand, 15533146 - 15533219
Alignment:
Q  271 ttcaacaatcgtggcacgttgcttctccatcgtgacac-aattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||||||||||||||||||||||||||| ||| | ||||  ||| || |||||||||||||||||||||    
T  15533146 ttcaaccatcgtggcacgttgcttctccatcgtggcacgatttctgtaga-tcctgattttaagttaactctcac 15533219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 1230604 - 1230657
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtg 214  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | |||||||    
T  1230604 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtg 1230657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 30974963 - 30975028
Alignment:
Q  78 tctaaaccctgtttttctacacac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||| ||||||||||||||| ||||||||||||||  |||| | || ||||||||||||||||    
T  30974963 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 30975028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 30981402 - 30981467
Alignment:
Q  78 tctaaaccctgtttttctacacac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||| ||||||||||||||| ||||||||||||||  |||| | || ||||||||||||||||    
T  30981402 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 30981467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 30987566 - 30987631
Alignment:
Q  78 tctaaaccctgtttttctacacac-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||| ||||||||||||||| ||||||||||||||  |||| | || ||||||||||||||||    
T  30987566 tctaaaccttgtttttctacacacttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 30987631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 17696061 - 17696025
Alignment:
Q  206 atcatcgtgccacgttacgattcaattgtggcacgat 242  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  17696061 atcatcgtgccacgttacgatccaatcgtggcacgat 17696025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 119; Significance: 9e-61; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 188431 - 188573
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  188431 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 188530  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  188531 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 188573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 188665 - 188752
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||||||| ||||||||||||||| || ||||||||||||||  ||| ||||||||||||  | |||||||||||||||||||    
T  188665 cctcataatcttgcttcaacaatcgtggcgcgatgcttctccatcgtagcacgattctccagatttctaattttaagttaactctcac 188752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 2e-58; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34547052 - 34547194
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34547052 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 34547151  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  || |||||| ||||||||||||||||    
T  34547152 ctttatcatctgatacaagacttatatttatagtggaaagtaa 34547194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25410123 - 25409982
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  25410123 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 25410025  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  25410024 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 25409982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 42006656 - 42006317
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| || ||||| |||||| ||||||||||||||||||||||||    
T  42006656 aggtgaatcaaaacaatcccaaccctagtgttcttgccaagagaaattttctataaaccatagtttgtttgttggcttctaaaccctgtttttctacaca 42006557  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
     ||| |||||| |||   || ||||| |||||||  ||||||||| ||         ||||||||||||||||| ||||||||||| |||| || ||||     
T  42006556 -tttttcatcttatacacggtttatatttatagt-aaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatacgtttatgttatt-tcctt 42006463  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgac-gacctcagaatcttgtttcaacaatcgtggcacgttgcttctcc 298  Q
     | |||| ||||||||||||||||||||| || ||| |||||||||| |||||||   | |||| |||||||||||| |||||||||||||| |||||||    
T  42006462 caacgtaccatcgtgccacgttacgattccatcgtgccacgattttttcagtgacttgcttcaggatcttgtttcaataatcgtggcacgttacttctcc 42006363  T
Q  299 atcgtgacac-aattctccagattcttgattttaagttaactctcac 344  Q
    | ||||| || | ||||||| |  | |||||||||||||||||||||    
T  42006362 aacgtgagacgatttctcca-aaacctgattttaagttaactctcac 42006317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25351346 - 25351205
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  25351346 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 25351248  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  25351247 ctttatcatctgatataaggcttatatttatagtggaaagtaa 25351205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25357040 - 25356899
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  25357040 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 25356942  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  25356941 ctttatcatctgatataaggcttatatttatagtggaaagtaa 25356899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7464707 - 7464849
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||    
T  7464707 aggtgaatcaaaacaatccaaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttttaaaccctgtttttctacaca 7464806  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||| |||  || |||||| ||||||||||||||||    
T  7464807 ctttatcatcttatacaagacttatatttatagtggaaagtaa 7464849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30246963 - 30246821
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||   |||||| ||||||||||||||||||| ||||    
T  30246963 aggtgaatcaaaacaatcccaaccgtagtgttgttgccaagagaaattctctataaaccctagttttgttgttggcttctaaaccctgtttttctccaca 30246864  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  30246863 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 30246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 44512714 - 44512856
Alignment:
Q  1 aggtgaatcaaaacaatcccaacca-tagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||||||||||||||||||||||  |||||||||||| |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44512714 aggtgaatcaaaacaatcccaacccctagtgttgttgcaaaga-aaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacac 44512812  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||| |||  ||||||||| ||||||||||||||||    
T  44512813 actttatcatcttatacaaggcttatatttatagtggaaagtaa 44512856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44144055 - 44144290
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    ||||||||||||||||||  |||| ||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||| || |||||||||||    
T  44144055 aggtgaatcaaaacaatcataaccctagtgttgttgccaagaaaaattctctataaaccctagtttgtatgttggcttctaaaccttg-ttttctacaca 44144153  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
    ||||||| |||||||  || |||||| |||||||||||||||||| ||         ||||||||||||||||| ||||||||||| |||| || ||||     
T  44144154 ctttatcgtctgatacaagacttatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatacgtttatgttatt-tcctt 44144249  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacg 240  Q
     | |||| ||||||||||||||||||||  || ||||||||    
T  44144250 gagcgtaccatcgtgccacgttacgattacatcgtggcacg 44144290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8378693 - 8378808
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  8378693 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 8378792  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  8378793 cttttatcatctgata 8378808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44016850 - 44016989
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  44016850 aggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacac 44016948  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaag 140  Q
    || | |||||||||||  ||| ||||| |||||||||||||    
T  44016949 acataatcatctgatacaaggtttatatttatagtggaaag 44016989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 208 - 344
Target Start/End: Original strand, 44144300 - 44144437
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacct-cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    |||||||||||||||| |||| |||||||||||| ||||| ||||||   || ||| |||||||||||||||||||||||||||| |||||||||||| |    
T  44144300 catcgtgccacgttacaattccattgtggcacgaattttctagtgacttgcttcaggatcttgtttcaacaatcgtggcacgttgtttctccatcgtggc 44144399  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    ||  ||||| |||||| |||||||||||||||||||||    
T  44144400 acgtttctctagattcctgattttaagttaactctcac 44144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7069773 - 7069633
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  7069773 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 7069676  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  7069675 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 7069633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 7074780 - 7074640
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  7074780 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 7074683  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  7074682 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 7074640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 25405386 - 25405246
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  25405386 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 25405289  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  25405288 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 25405246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44010939 - 44011078
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    ||||| |||||||||||||||||| ||||||| |||||||||| ||||| |||||||||| || |||||||||||| |||||||||||| ||||||||||    
T  44010939 aggtggatcaaaacaatcccaaccctagtgtttgttgccaagaaaaattctctataaaccatagtttgtatgttggcttctaaaccctg-ttttctacac 44011037  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaag 140  Q
    || | |||||||||||  ||| ||||| |||||||||||||    
T  44011038 acataatcatctgatacaaggtttatatttatagtggaaag 44011078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 161 - 343
Target Start/End: Complemental strand, 40946258 - 40946076
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||| | ||||||| |||| | |||| |||| ||| |||||||||||||||||   |  |    
T  40946258 aacaaatcttcaataaaaatatgttttatttttatcttcaatcgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagtgattgctcc 40946159  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctca 343  Q
    ||||| ||| ||||||||||||||||||  |||||| ||||||| ||| ||||| |||| |  ||||||||||||||||||||    
T  40946158 agaattttgcttcaacaatcgtggcacgaagcttcttcatcgtggcacgattcttcagaattctgattttaagttaactctca 40946076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15541184 - 15541297
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  15541184 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 15541281  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  15541282 cttttatcatctgata 15541297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 34547285 - 34547372
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  34547285 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtgacacgattctccagatttctgattttaagttaactctcac 34547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 44512969 - 44513056
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  44512969 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacaattctccagaattttgattttaagttaactctcac 44513056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3320239 - 3320352
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| ||| ||||||||||||| ||||| |||||   |||||||| ||||||||||||||    
T  3320239 aggtgaatcaaaacaatcccaaccctagagttgttgccaatagagattctctataaaccctagtttgtttgttg--atctaaaccttgtttttctacaca 3320336  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  3320337 cttttatcatctgata 3320352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3324987 - 3325100
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||| ||| ||||||||||||| ||||| |||||   |||||||| ||||||||||||||    
T  3324987 aggtgaatcaaaacaatcccaaccctagagttgttgccaatagagattctctataaaccctagtttgtttgttg--atctaaaccttgtttttctacaca 3325084  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  3325085 cttttatcatctgata 3325100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2120892 - 2120798
Alignment:
Q  1 aggtgaatcaa-aacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttc 94  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||| ||||||||    
T  2120892 aggtgaatcaacaacaatcccaaccctagagttgttgccaagagaaaatctctataaaccctagtttgtatgttggcttctaaaccttgtttttc 2120798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 21369635 - 21369543
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| ||||| || |||| ||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||||    
T  21369635 aggtgaatcaaaacaatctcaaccctaatgtttgttgccaagagaatttctctataaaccctagtttgtatgttggcttctaaaccctgtttt 21369543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 7464941 - 7465028
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  7464941 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 7465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 8378861 - 8378948
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| |||||||| |||  |||||||||||||||||||||    
T  8378861 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactctcac 8378948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 344
Target Start/End: Complemental strand, 30246730 - 30246643
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  30246730 cctcagaatcttgcttcaacaatcgtggcgcaatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 30246643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 1099625 - 1099697
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttgg 75  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  1099625 gtgaatcaaaacaatttcaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttgg 1099697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 7074523 - 7074441
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| ||||||||||| ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  7074523 gaatcttgcttcaaccatcgtggcacgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 7074441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 25351093 - 25351010
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactc 340  Q
    |||||| |||||| | |||||||||||||||| ||||||||||||||| ||| |||||||| |||  |||||||||||||||||    
T  25351093 cctcaggatcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactc 25351010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 340
Target Start/End: Complemental strand, 25356787 - 25356704
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactc 340  Q
    |||||| |||||| | |||||||||||||||| ||||||||||||||| ||| |||||||| |||  |||||||||||||||||    
T  25356787 cctcaggatcttgctccaacaatcgtggcacgatgcttctccatcgtggcacgattctccaaatttctgattttaagttaactc 25356704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 7069516 - 7069434
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  7069516 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 7069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 25405129 - 25405047
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  25405129 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatttctgattttaagttaactctcac 25405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6067389 - 6067503
Alignment:
Q  1 aggtgaatcaaaa-caatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctaca 98  Q
    ||||||||||||| ||||||||||| ||||||| ||| ||||||||| || ||||||||||||| ||||| |||||| ||||||||| || |||||| ||    
T  6067389 aggtgaatcaaaaacaatcccaaccctagtgtttgttaccaagagaa-ttctctataaaccctagtttgtttgttggcttctaaaccatg-ttttcttca 6067486  T
Q  99 cactttatcatctgata 115  Q
    ||| || ||||||||||    
T  6067487 cacgttttcatctgata 6067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 25409875 - 25409809
Alignment:
Q  273 caacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaact 339  Q
    ||||||||||||| || ||||||||||||||| ||| ||||||||||||  ||||||||||||||||    
T  25409875 caacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaact 25409809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 3320496 - 3320573
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaact 339  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  ||||||||||||||||    
T  3320496 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaact 3320573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 339
Target Start/End: Original strand, 3325244 - 3325321
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaact 339  Q
    |||||||| |||||| |||||||  || ||||||||||||||| ||| || || ||||||  ||||||||||||||||    
T  3325244 gaatcttgcttcaaccatcgtggtgcgatgcttctccatcgtggcacgatgcttcagatttctgattttaagttaact 3325321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 48457583 - 48457525
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacg 219  Q
    |||||||||||| |||||||||||||| |||| ||| ||||||| | ||||||| ||||    
T  48457583 aacaaatcttcaataaaaatacgttttattttaatcttcaatcgcaccatcgtggcacg 48457525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 1099725 - 1099761
Alignment:
Q  3 gtgaatcaaaacaatcccaaccatagtgttgttgcca 39  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  1099725 gtgaatcaaaacaatctcaaccctagtgttgttgcca 1099761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 9526459 - 9526317
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9526459 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacaca 9526360  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    |||||||||||||||  ||||||||| ||||||||||||||||    
T  9526359 ctttatcatctgatacaaggcttatatttatagtggaaagtaa 9526317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 2393471 - 2393811
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| || |||| ||||||| ||||||||| || |||||||| |     
T  2393471 aggtgaatcaaaacaatcccaaccctagtgttattgccaagagaaattctctataaaccttagtttgcatgttggcttctaaaccttg-ttttctactct 2393569  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcact-aaaaatacgttttgtttttatcctc 199  Q
     ||| ||||||||||  ||||||||| |||||||||||| || || ||         ||||||||||||||||| ||||||||||||      |||||      
T  2393570 gtttttcatctgatacaaggcttatatttatagtggaaaatatccctt---aaaatatggaacaaatcttcactgaaaaatacgtttcaaaaatatccat 2393666  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
     | |||| |||||||||||| ||||||||||  |||||||||||||| |||||| || |  ||||||||| |||||||||||||||  |  |||||||||    
T  2393667 tagcgtaccatcgtgccacgatacgattcaaccgtggcacgatttttacagtgatgatcatagaatcttgcttcaacaatcgtggcgtgaagcttctcca 2393766  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  2393767 tcgtggcacgattctccagatttctgattttaagttaactctcac 2393811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 21353535 - 21353674
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21353535 aggtgaatcaaaacaatcccaaccctagtgttgttaccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctacaca 21353634  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaag 140  Q
    |||||||||||||||  ||||||||| |||||||||||||    
T  21353635 ctttatcatctgatacaaggcttatatttatagtggaaag 21353674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25134064 - 25133829
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  25134064 aggtgaatcaaaacaatcacaaccatagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacaca 25133966  T
Q  101 ctttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttt-tgtttttatcctc 199  Q
     ||||||||||||||  || |||||| |||||||||||||||||| ||         ||||||||||||||||| |||||| |||| |||| || ||||     
T  25133965 ttttatcatctgatacaagacttatatttatagtggaaagtaaccctt---aaaatatggaacaaatcttcactgaaaatatgtttctgttatt-tcctt 25133870  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacg 240  Q
     | |||| ||||||||||||||||||||  || ||||||||    
T  25133869 cagcgtaccatcgtgccacgttacgattacatcgtggcacg 25133829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 208 - 344
Target Start/End: Complemental strand, 25133819 - 25133682
Alignment:
Q  208 catcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc-agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgac 306  Q
    ||||||||||||||| ||||| || ||||||||||||||||| ||||   ||  || |||||| ||||||||||||||||||||||||||||||||||||    
T  25133819 catcgtgccacgttatgattccatcgtggcacgatttttccaatgacttgctttaggatcttgcttcaacaatcgtggcacgttgcttctccatcgtgac 25133720  T
Q  307 acaattctccagattcttgattttaagttaactctcac 344  Q
    ||  |||||||||||| |||||||||||||||||||||    
T  25133719 acgtttctccagattcctgattttaagttaactctcac 25133682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9521708 - 9521593
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| |||   |||| |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  9521708 aggtgaatcaaaacaatcccaaccctagaaatgttaccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacaca 9521609  T
Q  101 c-tttatcatctgata 115  Q
    | ||||||||||||||    
T  9521608 cttttatcatctgata 9521593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 344
Target Start/End: Original strand, 2401585 - 2401725
Alignment:
Q  204 gtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgt 303  Q
    ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||| |  ||||||||| |||||||||||||||     |||||||||||||    
T  2401585 gtatcattgtgccacgttacaattcaatcgtggcacgattttttcagtgacgatcatagaatcttgcttcaacaatcgtggcgaaaagcttctccatcgt 2401684  T
Q  304 gacacaattctccagattcttgattttaagttaactctcac 344  Q
    | ||| ||||||||||||  |||||||||||||||||||||    
T  2401685 ggcacgattctccagatttctgattttaagttaactctcac 2401725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 2232590 - 2232450
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||  ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  2232590 aggtgaatcaaaacaatcccaaccctaaagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 2232493  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  2232492 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 2232450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3091295 - 3091433
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  3091295 aggtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctg-ttttctacac 3091393  T
Q  100 actttatcatctgatagtaggcttataattatagtggaaag 140  Q
    || |  ||||||||||  ||| ||||| |||||||||||||    
T  3091394 acatattcatctgatacaagg-ttatatttatagtggaaag 3091433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4144872 - 4144963
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttt 92  Q
    |||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  4144872 aggtgaatcaaaacaatctcaaccctagtgtttttgccaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttt 4144963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 21353769 - 21353852
Alignment:
Q  257 cctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactc 340  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||    
T  21353769 cctcagaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactc 21353852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 262 - 344
Target Start/End: Complemental strand, 9521450 - 9521368
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  9521450 gaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 9521368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 13449905 - 13450032
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    |||||||||||| |||||||||||||| ||||||||  | |||| | ||||||| |||| | |||| |||| |||||||||||||||||||||   |  |    
T  13449905 aacaaatcttcaataaaaatacgttttatttttatctaccatcgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtgattgctcc 13450004  T
Q  261 agaatcttgtttcaacaatcgtggcacg 288  Q
    ||||| ||| ||||||||||||||||||    
T  13450005 agaattttgcttcaacaatcgtggcacg 13450032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2401410 - 2401468
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaacc 59  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  2401410 aggtgaatcaaaacaatctcaaccctagtgttgttgccaagagaaattctctataaacc 2401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 9526199 - 9526118
Alignment:
Q  263 aatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||  |||||||||||||||||||||    
T  9526199 aatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaagttaactctcac 9526118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 344
Target Start/End: Complemental strand, 2617365 - 2617281
Alignment:
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||   ||||||||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  2617365 cagaattttgcttcaacaatcgtggcacgaaacttctccatcgtggcacgattctccagaattctgattttaagttaactctcac 2617281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14997033 - 14996931
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttg-ttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacac 99  Q
    |||||||| ||||||||||||||| |||||||  || ||||||||| || | ||||||||||| ||||| |||||| |||||||||||| ||||||||||    
T  14997033 aggtgaataaaaacaatcccaaccctagtgtttattaccaagagaa-ttctttataaaccctagtttgtttgttggcttctaaaccctg-ttttctacac 14996936  T
Q  100 acttt 104  Q
    |||||    
T  14996935 acttt 14996931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 344
Target Start/End: Complemental strand, 2232374 - 2232263
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||  |  ||   |||||||| |||||| |||||||| || ||||||||||||||| ||  || |||||||||  |||||||||    
T  2232374 gtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcatgatgctccagatttctgattttaa 2232275  T
Q  333 gttaactctcac 344  Q
    ||||||||||||    
T  2232274 gttaactctcac 2232263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 23689313 - 23689383
Alignment:
Q  274 aacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||||||| || ||||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||    
T  23689313 aacaatcgtggcgcgatgcttctccatcgtggcatgattctctagatttttgattttaagttaactctcac 23689383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 46783136 - 46783040
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgtt-gttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctac 97  Q
    |||||||||||||| ||| ||||| ||||||| ||||| |||| || || |||||||||| || ||||| |||||| ||||||||||| |||||||||    
T  46783136 aggtgaatcaaaacgatctcaaccctagtgtttgttgcaaagataa-ttctctataaaccatagtttgtttgttggcttctaaaccctatttttctac 46783040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 2617442 - 2617384
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacg 219  Q
    |||||||||||| |||||||||||||| |||||||| ||||||| | ||||||| ||||    
T  2617442 aacaaatcttcaataaaaatacgttttatttttatcttcaatcgcaccatcgtggcacg 2617384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 17178 - 17317
Alignment:
Q  4 tgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacactt 103  Q
    |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  17178 tgaaacaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgtttttctacactctt 17277  T
Q  104 tatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    ||||||||||||  ||||||||| ||||||||||||||||    
T  17278 tatcatctgatacaaggcttatatttatagtggaaagtaa 17317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 262 - 344
Target Start/End: Original strand, 17413 - 17495
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||||| ||||||||||||||| || |||||||| |||||| ||| || |||||||||  |||||||||||||||||||||    
T  17413 gaatcttgcttcaacaatcgtggcgcgatgcttctctatcgtggcacgatactccagatttctgattttaagttaactctcac 17495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 16318 - 15977
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  16318 aggtgaatcaaaacaatcccaaccctagtgttgttgccaagagaaattctctataaaccctagtttgaatgttggcttctaaaccctgtttttctacaca 16219  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaaccatttnnnnnnnttggaacaaatcttcactaaaaatacgttttgtttttatcctc 199  Q
    | ||||||||||||||  |||| | || |||||||||||||||| |  ||        || |||||||| | ||||||||||||||||  ||||||| ||    
T  16218 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaaacccttaaaaaac-tgaaacaaatc-taactaaaaatacgtttttattttatcttc 16122  T
Q  200 aatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctcca 299  Q
    |     | ||||||| |||| | ||   | || |||||||||  |||| |||  |  ||   ||| |||| ||||||||||||||| || ||||||||||    
T  16121 agcgcgaccatcgtggcacgatgcggggccatcgtggcacgaaatttctagtagcttcccaggaagcttgcttcaacaatcgtggcgcgatgcttctcca 16022  T
Q  300 tcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||||    
T  16021 tcgtggcacgattctccagatttctgattttaagttaactctcac 15977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 31134 - 30994
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  31134 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 31037  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaagtaa 143  Q
    | ||||||||||||||  |||| | || ||||||||||||||||    
T  31036 cttttatcatctgatacaaggc-tgtatttatagtggaaagtaa 30994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 30905 - 30795
Alignment:
Q  233 gtggcacgatttttccagtgacgacctcagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaa 332  Q
    |||||||||||||||||||  |  ||   |||||||| |||||| ||| |||| || ||||||||||||||| ||| || |||||||||  |||||||||    
T  30905 gtggcacgatttttccagtagcttcccaggaatcttgcttcaaccatcctggcgcgatgcttctccatcgtggcacgatgctccagatttctgattttaa 30806  T
Q  333 gttaactctca 343  Q
    |||||||||||    
T  30805 gttaactctca 30795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 224812 - 224675
Alignment:
Q  1 aggtgaatcaaaacaatcccaaccatagtgttgttgccaagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacaca 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||| ||||||  |||||||| ||||||||||||||    
T  224812 aggtgaatcaaaacaatcccaaccctagagttgttgccaagagagattctctataaaccctagtttgtttgttgg--tctaaaccttgtttttctacaca 224715  T
Q  101 c-tttatcatctgatagtaggcttataattatagtggaaag 140  Q
    | ||||||||||||||  |||| | || |||||||||||||    
T  224714 cttttatcatctgatacaaggc-tgtatttatagtggaaag 224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 224576 - 224517
Alignment:
Q  262 gaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagatt 321  Q
    |||||||| |||||| |||||||| || ||||||||||||||| ||| || |||||||||    
T  224576 gaatcttgcttcaaccatcgtggcgcgatgcttctccatcgtggcacgatactccagatt 224517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 161 - 344
Target Start/End: Original strand, 41839 - 42021
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcgtatcatcgtgccacgttacgattcaattgtggcacgatttttccagtgacgacctc 260  Q
    ||||||| |||| |||||||||||||| |||||||| ||||||| |  |||||| |||| | |||| |||| ||||||||||||||||||||    || |    
T  41839 aacaaattttcaataaaaatacgttttatttttatcttcaatcgcactatcgtggcacgattcgatacaatcgtggcacgatttttccagtgtttgcc-c 41937  T
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||  ||| | ||||||||||||||||  |||||||||||||| ||| ||||| |||| |  |||||||||||||||||||||    
T  41938 agaactttgctccaacaatcgtggcacgaagcttctccatcgtggcacgattcttcagaattctgattttaagttaactctcac 42021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 1391 - 1314
Alignment:
Q  39 aagagaaattatctataaaccctaatttgtatgttggtttctaaaccctgtttttctacacac-tttatcatctgata 115  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1391 aagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacacacttttatcatctgata 1314  T

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Target: scaffold1764; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 261 - 344
Target Start/End: Complemental strand, 1192 - 1109
Alignment:
Q  261 agaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    ||||||||| ||||||||||||||| || ||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  1192 agaatcttgcttcaacaatcgtggcgcgatgcttctccatcgtggcacgattctccagatttctgattttaagttaactctcac 1109  T

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Target: scaffold0552 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 260 - 344
Target Start/End: Original strand, 1264 - 1348
Alignment:
Q  260 cagaatcttgtttcaacaatcgtggcacgttgcttctccatcgtgacacaattctccagattcttgattttaagttaactctcac 344  Q
    |||||| ||| ||||||||||||||||||  |||||| ||||||| ||| |||||||||| |  |||||||||||||||||||||    
T  1264 cagaattttgcttcaacaatcgtggcacgaagcttctacatcgtggcacgattctccagaattctgattttaagttaactctcac 1348  T

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Target: scaffold0552; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 1186 - 1229
Alignment:
Q  161 aacaaatcttcactaaaaatacgttttgtttttatcctcaatcg 204  Q
    |||||||||||| |||||||||||||| |||||||| |||||||    
T  1186 aacaaatcttcaataaaaatacgttttatttttatcttcaatcg 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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