View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13925_low_17 (Length: 328)

Name: NF13925_low_17
Description: NF13925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13925_low_17
NF13925_low_17
[»] chr8 (68 HSPs)
chr8 (13-169)||(37985850-37986006)
chr8 (13-168)||(17841645-17841801)
chr8 (13-169)||(26041907-26042064)
chr8 (13-169)||(40779923-40780080)
chr8 (13-168)||(6108028-6108184)
chr8 (13-172)||(1645755-1645916)
chr8 (24-169)||(15187686-15187831)
chr8 (13-172)||(34665496-34665655)
chr8 (13-166)||(20091598-20091752)
chr8 (13-168)||(3596836-3596992)
chr8 (13-168)||(25581034-25581190)
chr8 (13-166)||(38017048-38017201)
chr8 (13-168)||(42754837-42754993)
chr8 (68-168)||(10044518-10044618)
chr8 (13-169)||(32064859-32065017)
chr8 (68-167)||(14129029-14129128)
chr8 (68-166)||(24211169-24211267)
chr8 (74-169)||(1503637-1503732)
chr8 (13-168)||(30055631-30055786)
chr8 (169-312)||(36783400-36783541)
chr8 (13-156)||(35353155-35353299)
chr8 (13-156)||(32393972-32394114)
chr8 (13-143)||(8453948-8454078)
chr8 (80-172)||(31347567-31347659)
chr8 (27-157)||(39772608-39772739)
chr8 (69-171)||(37132472-37132575)
chr8 (78-171)||(7022159-7022252)
chr8 (76-165)||(3890412-3890502)
chr8 (30-169)||(30834849-30834989)
chr8 (76-137)||(41819594-41819655)
chr8 (78-170)||(7017651-7017743)
chr8 (30-168)||(24844655-24844793)
chr8 (13-58)||(24211459-24211504)
chr8 (92-164)||(27782105-27782178)
chr8 (92-164)||(32064749-32064822)
chr8 (92-164)||(34665386-34665459)
chr8 (13-58)||(7017771-7017816)
chr8 (92-164)||(17841838-17841911)
chr8 (92-164)||(20091789-20091862)
chr8 (92-164)||(31347770-31347843)
chr8 (92-164)||(40780117-40780190)
chr8 (92-156)||(42755030-42755095)
chr8 (92-163)||(25581227-25581299)
chr8 (106-156)||(1886621-1886672)
chr8 (92-165)||(24844847-24844920)
chr8 (92-164)||(7017853-7017926)
chr8 (92-156)||(7021990-7022055)
chr8 (13-58)||(7022092-7022137)
chr8 (92-164)||(8453838-8453911)
chr8 (92-164)||(14128868-14128941)
chr8 (92-164)||(15187564-15187637)
chr8 (92-164)||(26042104-26042177)
chr8 (13-54)||(27782027-27782068)
chr8 (13-128)||(27835288-27835404)
chr8 (92-164)||(32393862-32393935)
chr8 (92-164)||(35353045-35353118)
chr8 (92-164)||(37986043-37986116)
chr8 (13-58)||(41819684-41819729)
chr8 (92-156)||(30835035-30835099)
chr8 (101-156)||(38016983-38017039)
chr8 (99-137)||(3890611-3890649)
chr8 (92-137)||(3597029-3597074)
chr8 (92-156)||(6108221-6108286)
chr8 (13-58)||(10044457-10044502)
chr8 (92-137)||(15972865-15972910)
chr8 (92-164)||(27835441-27835514)
chr8 (13-58)||(31347688-31347733)
chr8 (92-129)||(39772789-39772826)
[»] chr3 (52 HSPs)
chr3 (13-172)||(22426136-22426295)
chr3 (13-172)||(33113907-33114068)
chr3 (24-168)||(30385526-30385670)
chr3 (13-168)||(19650695-19650850)
chr3 (13-170)||(3137207-3137365)
chr3 (13-170)||(3456178-3456336)
chr3 (13-168)||(3574321-3574477)
chr3 (13-170)||(37216846-37217004)
chr3 (13-170)||(6041998-6042149)
chr3 (68-170)||(34482681-34482783)
chr3 (13-168)||(3089531-3089689)
chr3 (13-168)||(37522167-37522323)
chr3 (68-167)||(8320378-8320477)
chr3 (13-168)||(2754831-2754989)
chr3 (13-170)||(48161019-48161178)
chr3 (13-166)||(33145826-33145980)
chr3 (26-171)||(36864824-36864969)
chr3 (68-177)||(47738281-47738391)
chr3 (68-168)||(26612916-26613017)
chr3 (78-170)||(40328011-40328104)
chr3 (78-170)||(8361832-8361924)
chr3 (78-168)||(9796824-9796914)
chr3 (13-156)||(33839645-33839794)
chr3 (68-171)||(42921295-42921399)
chr3 (78-169)||(41224414-41224505)
chr3 (13-168)||(42297978-42298122)
chr3 (68-167)||(46919064-46919164)
chr3 (69-168)||(24343720-24343820)
chr3 (13-153)||(41883031-41883174)
chr3 (92-164)||(2754721-2754794)
chr3 (13-58)||(30385125-30385170)
chr3 (92-164)||(3137402-3137475)
chr3 (92-164)||(3574515-3574588)
chr3 (92-164)||(6041888-6041961)
chr3 (92-156)||(9797017-9797082)
chr3 (92-156)||(47738117-47738182)
chr3 (92-164)||(33145717-33145789)
chr3 (13-58)||(8361951-8361996)
chr3 (92-137)||(8362033-8362078)
chr3 (92-164)||(11347272-11347345)
chr3 (13-50)||(34482824-34482861)
chr3 (92-164)||(37217041-37217114)
chr3 (13-58)||(40327939-40327984)
chr3 (13-58)||(42297468-42297513)
chr3 (13-58)||(47738219-47738264)
chr3 (13-105)||(11347382-11347476)
chr3 (13-58)||(9796935-9796980)
chr3 (92-156)||(19650888-19650953)
chr3 (92-164)||(30385015-30385088)
chr3 (92-164)||(34482898-34482971)
chr3 (29-58)||(41224363-41224392)
chr3 (92-137)||(41883211-41883256)
[»] chr7 (39 HSPs)
chr7 (13-169)||(45637826-45637982)
chr7 (13-168)||(24395086-24395241)
chr7 (13-170)||(3962093-3962250)
chr7 (13-169)||(48880721-48880878)
chr7 (13-169)||(42611925-42612082)
chr7 (15-172)||(15577638-15577799)
chr7 (13-168)||(30848683-30848839)
chr7 (13-166)||(4974532-4974686)
chr7 (13-168)||(34482949-34483108)
chr7 (13-172)||(15329387-15329548)
chr7 (13-168)||(25167651-25167801)
chr7 (68-174)||(35445567-35445673)
chr7 (68-168)||(35876414-35876514)
chr7 (13-167)||(37476876-37477031)
chr7 (13-169)||(42696197-42696355)
chr7 (68-159)||(29737314-29737406)
chr7 (13-171)||(18037092-18037250)
chr7 (13-166)||(20009895-20010049)
chr7 (78-169)||(15238564-15238655)
chr7 (92-164)||(4974723-4974796)
chr7 (92-164)||(42611815-42611888)
chr7 (92-164)||(45637716-45637789)
chr7 (95-164)||(15577841-15577911)
chr7 (102-168)||(40880641-40880706)
chr7 (92-164)||(15329277-15329350)
chr7 (92-164)||(34482839-34482912)
chr7 (104-168)||(36790271-36790336)
chr7 (92-164)||(48880915-48880988)
chr7 (13-55)||(15238496-15238538)
chr7 (92-137)||(15238414-15238459)
chr7 (92-164)||(24394976-24395049)
chr7 (92-164)||(35444562-35444635)
chr7 (13-55)||(35444672-35444714)
chr7 (103-164)||(37477079-37477141)
chr7 (92-164)||(3961983-3962056)
chr7 (92-156)||(18036990-18037055)
chr7 (92-164)||(25167838-25167911)
chr7 (92-164)||(29737143-29737216)
chr7 (92-164)||(36790454-36790527)
[»] chr1 (43 HSPs)
chr1 (13-170)||(44094812-44094969)
chr1 (13-179)||(36966492-36966659)
chr1 (13-167)||(40215102-40215257)
chr1 (13-169)||(19015518-19015675)
chr1 (13-168)||(25463790-25463946)
chr1 (13-172)||(51737619-51737779)
chr1 (13-171)||(41876234-41876393)
chr1 (13-168)||(6883601-6883757)
chr1 (13-172)||(20304921-20305082)
chr1 (13-168)||(37821629-37821785)
chr1 (13-168)||(3559731-3559887)
chr1 (23-168)||(25973533-25973677)
chr1 (68-170)||(18404618-18404720)
chr1 (13-168)||(9910086-9910244)
chr1 (78-171)||(33786423-33786516)
chr1 (78-168)||(32000061-32000151)
chr1 (92-168)||(19722894-19722970)
chr1 (78-166)||(40273888-40273976)
chr1 (13-172)||(44690812-44690980)
chr1 (13-170)||(27523048-27523206)
chr1 (92-165)||(33786623-33786696)
chr1 (68-171)||(10167569-10167673)
chr1 (96-167)||(52064373-52064445)
chr1 (92-164)||(16045786-16045859)
chr1 (92-164)||(40214992-40215065)
chr1 (92-164)||(40273706-40273779)
chr1 (92-164)||(18404446-18404519)
chr1 (92-164)||(25463680-25463753)
chr1 (13-58)||(40273816-40273861)
chr1 (92-164)||(44094702-44094775)
chr1 (76-131)||(52329453-52329508)
chr1 (92-164)||(6883491-6883564)
chr1 (92-164)||(9910281-9910354)
chr1 (13-58)||(18404556-18404601)
chr1 (92-164)||(19015408-19015481)
chr1 (92-164)||(32000255-32000328)
chr1 (92-164)||(36966696-36966769)
chr1 (92-164)||(37821822-37821895)
chr1 (76-168)||(22157333-22157425)
chr1 (27-58)||(32000173-32000204)
chr1 (13-56)||(33786543-33786586)
chr1 (92-164)||(3559621-3559694)
chr1 (92-156)||(44691017-44691082)
[»] scaffold0085 (2 HSPs)
scaffold0085 (13-173)||(47964-48124)
scaffold0085 (92-164)||(47854-47927)
[»] chr4 (58 HSPs)
chr4 (13-168)||(36073464-36073619)
chr4 (13-170)||(53123145-53123303)
chr4 (13-172)||(22199375-22199533)
chr4 (13-170)||(46441958-46442116)
chr4 (13-169)||(21802114-21802273)
chr4 (13-172)||(47290180-47290340)
chr4 (13-170)||(2624951-2625109)
chr4 (13-166)||(9088984-9089138)
chr4 (13-170)||(36073061-36073223)
chr4 (13-169)||(7744906-7745063)
chr4 (13-169)||(44893007-44893164)
chr4 (13-170)||(4751560-4751719)
chr4 (13-169)||(10442581-10442740)
chr4 (13-168)||(44893540-44893696)
chr4 (13-170)||(31078612-31078770)
chr4 (13-170)||(49387680-49387839)
chr4 (13-166)||(24128353-24128507)
chr4 (13-169)||(50156373-50156529)
chr4 (68-168)||(33530479-33530579)
chr4 (13-158)||(23964269-23964416)
chr4 (13-166)||(17655544-17655699)
chr4 (13-137)||(30563323-30563448)
chr4 (13-169)||(37934735-37934892)
chr4 (71-170)||(11314044-11314144)
chr4 (68-171)||(37219801-37219905)
chr4 (78-171)||(24392854-24392947)
chr4 (13-168)||(42671783-42671939)
chr4 (102-168)||(25063369-25063436)
chr4 (19-167)||(44744554-44744698)
chr4 (92-164)||(33530676-33530749)
chr4 (92-164)||(10442777-10442850)
chr4 (92-164)||(31078807-31078880)
chr4 (76-168)||(36073256-36073349)
chr4 (92-164)||(49387876-49387949)
chr4 (92-164)||(2624841-2624914)
chr4 (92-164)||(7745100-7745173)
chr4 (92-164)||(21802310-21802383)
chr4 (92-164)||(22199265-22199338)
chr4 (92-164)||(24392671-24392744)
chr4 (92-164)||(36072951-36073024)
chr4 (92-164)||(46441848-46441921)
chr4 (92-164)||(47290070-47290143)
chr4 (13-57)||(36073650-36073694)
chr4 (92-155)||(36073731-36073795)
chr4 (92-164)||(53123034-53123108)
chr4 (92-164)||(4751450-4751523)
chr4 (92-164)||(24128243-24128316)
chr4 (13-58)||(24392781-24392826)
chr4 (92-164)||(36073354-36073427)
chr4 (13-58)||(37219739-37219784)
chr4 (92-164)||(44893430-44893503)
chr4 (92-162)||(42671675-42671746)
chr4 (92-138)||(17655461-17655507)
chr4 (92-129)||(9088910-9088947)
chr4 (92-156)||(23964453-23964518)
chr4 (92-129)||(44893201-44893238)
chr4 (92-164)||(50156566-50156639)
chr4 (13-57)||(33530596-33530639)
[»] chr5 (39 HSPs)
chr5 (13-169)||(4892316-4892473)
chr5 (13-169)||(3521801-3521957)
chr5 (13-172)||(25398352-25398512)
chr5 (13-168)||(33584124-33584280)
chr5 (13-168)||(6043307-6043462)
chr5 (13-168)||(8145489-8145643)
chr5 (13-169)||(37321587-37321744)
chr5 (13-169)||(14138782-14138938)
chr5 (13-165)||(12850915-12851069)
chr5 (13-167)||(3362892-3363048)
chr5 (13-168)||(2477750-2477906)
chr5 (13-168)||(38899520-38899677)
chr5 (13-147)||(11360947-11361082)
chr5 (13-168)||(22912852-22913005)
chr5 (13-126)||(4433845-4433958)
chr5 (68-169)||(12614531-12614633)
chr5 (13-137)||(31640767-31640891)
chr5 (78-169)||(17545476-17545567)
chr5 (92-164)||(12614721-12614794)
chr5 (92-164)||(22913042-22913115)
chr5 (29-151)||(27481952-27482077)
chr5 (92-164)||(2477640-2477713)
chr5 (92-164)||(6043499-6043572)
chr5 (92-156)||(8145387-8145452)
chr5 (92-164)||(11361119-11361192)
chr5 (97-156)||(10458409-10458469)
chr5 (75-131)||(13664736-13664792)
chr5 (13-55)||(17545594-17545636)
chr5 (92-164)||(3362782-3362855)
chr5 (92-164)||(4433995-4434068)
chr5 (92-164)||(4892206-4892279)
chr5 (92-137)||(17545673-17545718)
chr5 (92-164)||(25398242-25398315)
chr5 (92-137)||(31640928-31640973)
chr5 (92-164)||(38899714-38899787)
chr5 (138-177)||(12614483-12614522)
chr5 (92-156)||(3521994-3522059)
chr5 (92-164)||(12850805-12850878)
chr5 (92-164)||(33584317-33584390)
[»] scaffold0228 (6 HSPs)
scaffold0228 (13-172)||(26050-26210)
scaffold0228 (13-172)||(16098-16258)
scaffold0228 (13-101)||(8516-8605)
scaffold0228 (92-156)||(8414-8479)
scaffold0228 (92-156)||(15996-16061)
scaffold0228 (92-156)||(25948-26013)
[»] chr6 (37 HSPs)
chr6 (13-168)||(17175816-17175972)
chr6 (13-170)||(33696810-33696969)
chr6 (13-168)||(18365369-18365524)
chr6 (13-168)||(18370633-18370788)
chr6 (13-172)||(17705260-17705416)
chr6 (13-170)||(28675262-28675420)
chr6 (13-170)||(32702319-32702477)
chr6 (13-168)||(33695121-33695278)
chr6 (13-168)||(2309218-2309374)
chr6 (13-170)||(23290874-23291035)
chr6 (13-166)||(6031537-6031692)
chr6 (13-137)||(18889470-18889594)
chr6 (78-166)||(11548386-11548474)
chr6 (68-170)||(29693615-29693718)
chr6 (13-127)||(6127390-6127506)
chr6 (102-167)||(34238883-34238948)
chr6 (13-100)||(9752109-9752196)
chr6 (13-58)||(25987044-25987089)
chr6 (13-134)||(8515556-8515677)
chr6 (92-164)||(33695315-33695388)
chr6 (92-164)||(33696700-33696773)
chr6 (90-168)||(582522-582602)
chr6 (92-164)||(6127279-6127352)
chr6 (92-164)||(23291072-23291145)
chr6 (13-58)||(29693552-29693597)
chr6 (114-168)||(2121004-2121059)
chr6 (102-164)||(8515723-8515786)
chr6 (92-162)||(11548576-11548647)
chr6 (102-164)||(25986934-25986997)
chr6 (92-164)||(17176009-17176082)
chr6 (92-164)||(17705453-17705526)
chr6 (92-164)||(18365561-18365634)
chr6 (92-164)||(18370825-18370898)
chr6 (92-164)||(28675152-28675225)
chr6 (92-164)||(18889685-18889757)
chr6 (92-137)||(9752233-9752278)
chr6 (13-58)||(11548495-11548539)
[»] chr2 (40 HSPs)
chr2 (13-168)||(23267857-23268013)
chr2 (13-168)||(33380321-33380477)
chr2 (13-168)||(35160871-35161029)
chr2 (13-168)||(9293370-9293527)
chr2 (13-164)||(3989190-3989342)
chr2 (13-165)||(31174633-31174785)
chr2 (13-168)||(10662001-10662158)
chr2 (13-168)||(7475303-7475459)
chr2 (24-171)||(13354972-13355121)
chr2 (78-169)||(43331092-43331183)
chr2 (68-172)||(22592880-22592987)
chr2 (24-137)||(21936207-21936321)
chr2 (13-168)||(9723519-9723677)
chr2 (78-166)||(21393483-21393570)
chr2 (68-137)||(16767288-16767357)
chr2 (78-170)||(34320961-34321042)
chr2 (92-164)||(14941354-14941427)
chr2 (78-147)||(37335824-37335894)
chr2 (92-164)||(9293564-9293637)
chr2 (13-58)||(16767378-16767423)
chr2 (13-172)||(40262527-40262687)
chr2 (14-128)||(14941199-14941317)
chr2 (92-164)||(10661891-10661964)
chr2 (92-164)||(21936085-21936158)
chr2 (92-164)||(23268050-23268123)
chr2 (92-156)||(27847644-27847709)
chr2 (92-156)||(31174822-31174887)
chr2 (92-164)||(35160761-35160834)
chr2 (93-138)||(37335744-37335789)
chr2 (123-168)||(39819272-39819317)
chr2 (92-164)||(43330916-43330989)
chr2 (92-164)||(9723409-9723482)
chr2 (13-58)||(21393594-21393639)
chr2 (13-58)||(27847746-27847791)
chr2 (13-58)||(43331026-43331071)
chr2 (129-170)||(27847791-27847833)
chr2 (92-164)||(7475496-7475569)
chr2 (92-156)||(13354858-13354923)
chr2 (92-164)||(21393676-21393749)
chr2 (92-164)||(33380211-33380284)
[»] scaffold0096 (2 HSPs)
scaffold0096 (13-168)||(41125-41280)
scaffold0096 (92-164)||(41015-41088)
[»] scaffold0204 (2 HSPs)
scaffold0204 (13-168)||(4510-4666)
scaffold0204 (92-164)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (13-168)||(11735-11891)
scaffold0178 (92-164)||(11625-11698)
[»] scaffold0471 (2 HSPs)
scaffold0471 (13-166)||(12956-13110)
scaffold0471 (92-164)||(12846-12919)
[»] scaffold0041 (1 HSPs)
scaffold0041 (102-168)||(85577-85642)
[»] scaffold0665 (1 HSPs)
scaffold0665 (92-164)||(3072-3145)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 6e-65; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37986006 - 37985850
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||| ||||||||||||||||||||||||||    
T  37986006 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatctaaaggtgattattgt 37985907  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37985906 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 37985850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 17841801 - 17841645
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  17841801 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17841702  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17841701 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 17841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 26042064 - 26041907
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  26042064 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26041965  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26041964 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 26041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 40780080 - 40779923
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  40780080 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 40779981  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40779980 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 40779923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 6108184 - 6108028
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  6108184 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 6108085  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6108084 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 1645916 - 1645755
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  1645916 aaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 1645817  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  1645816 gtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttcctttt 1645755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 15187686 - 15187831
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 123  Q
    ||||||||||||||||| |||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15187686 ctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatt 15187785  T
Q  124 cttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15187786 cttggatctttcttataaaatcattcttgatatctagcattttcct 15187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 34665496 - 34665655
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  |||||| ||||||||| |||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  34665496 aaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgt 34665595  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34665596 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttttctttt 34665655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 20091752 - 20091598
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || ||||||||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  20091752 aaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 20091653  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20091652 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 20091598  T

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Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 3596992 - 3596836
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  3596992 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 3596893  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  3596892 tgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 3596836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25581190 - 25581034
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  25581190 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25581091  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25581090 tgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25581034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 38017048 - 38017201
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga-ttattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||| | ||||||    
T  38017048 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttt-tgaaagattaataaatgagactgaaatctaaaggtaaattattg 38017146  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38017147 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 42754993 - 42754837
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  42754993 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 42754894  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  42754893 taccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 42754837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 10044518 - 10044618
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  168 c 168  Q
    |    
T  10044618 c 10044618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 32064859 - 32065017
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||| || |||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  32064859 aaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 32064958  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  32064959 gtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 32065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 14129029 - 14129128
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14129029 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttcttataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 1503732 - 1503637
Alignment:
Q  74 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 1503637  T

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Target: chr8; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 30055631 - 30055786
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          ||||||| ||||||||||||||| |||||||| |||||||||||    
T  30055631 aaaatctcag-ctggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaatctaagggtgattattg 30055729  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30055730 tgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcc 30055786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 169 - 312
Target Start/End: Original strand, 36783400 - 36783541
Alignment:
Q  169 ttttcatataccaaataaaaattagaataccttttttgtataacttgtaaaagaaaggtnnnnnnnnnnnnnnnctttgaatctataaatatcatatcaa 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               |||| |||||||||||||||||||||    
T  36783400 ttttcatataccaaataaaaattagaataccttttttgtataacttgtaaaagaaaggtacaaaaaaaaaaa--cttttaatctataaatatcatatcaa 36783497  T
Q  269 acctgagtgtggattaccaattctccaataatagtaggtaaaag 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36783498 acctgagtgtggattaccaattctccaataatagtaggtaaaag 36783541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 35353155 - 35353299
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||          ||||||||||||||||||||| | |||| |||||||||||||||    
T  35353155 aaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattg 35353254  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35353255 tgccatgtcattcttgaatttttcttataaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 32393972 - 32394114
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  32393972 aaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 32394071  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    | |||||||||||| ||| ||| |||||||||||||||||||||    
T  32394072 g-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 143
Target Start/End: Original strand, 8453948 - 8454078
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  8453948 aaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8454047  T
Q  113 gccatgtcattcttgaatctttcttataaaa 143  Q
    ||||||||||||||||||  |||||||||||    
T  8454048 gccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 31347659 - 31347567
Alignment:
Q  80 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcctttt 31347567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 39772739 - 39772608
Alignment:
Q  27 gccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 125  Q
    ||||||||||||||| ||||||||||||||||          |||||||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  39772739 gccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattct 39772640  T
Q  126 tgaatctttcttataaaatcattcttgatatc 157  Q
    || |||||||||||||||||||||||||||||    
T  39772639 tggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 37132575 - 37132472
Alignment:
Q  69 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 167  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||     
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcattttt 37132476  T
Q  168 cttt 171  Q
    ||||    
T  37132475 cttt 37132472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 7022159 - 7022252
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
    |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||   |||||||| ||||||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttccttt 7022252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 165  Q
    ||||||||| ||| | |||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 30834989 - 30834849
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||||||||||||||||||||||||         || |||  || | |||| | |||||||||||| |||| ||||| || |||||||||||| ||    
T  30834989 ggaaatcatggggtggtgggtgttatgtattttattttatcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaa 30834890  T
Q  130 tctttctt-ataaaatcattcttgatatctagcattttcct 169  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  30834889 tctttcttgataaaatcattcttgatatctatcattttcct 30834849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 137
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 7017743 - 7017651
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcctt 7017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 24844793 - 24844655
Alignment:
Q  30 ggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    ||||||||| |||||||||||||||||||         ||||||| ||||||| | ||| | ||||||||  ||||||||| ||||||| ||||||| ||    
T  24844793 ggaaatcatagggtggtgggtgttatgtatttttttt-atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaa 24844695  T
Q  130 tctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    |||||||| ||||||||||| |||||||||| ||||||||    
T  24844694 tctttcttgataaaatcattattgatatctaacattttcc 24844655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 24211504 - 24211459
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  24211504 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 27782105 - 27782178
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||| |||||||  |||||||||| |||||||    
T  27782105 aaatctaagggtgattattctgccatgtcattattgaatctttcttgataaaatatttcttgatatatagcatt 27782178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 7017816 - 7017771
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  7017816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 7017771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcat 163  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 156
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  106 ttattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 165  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||||||| |||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||| |||||||||||| |||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7022092 - 7022137
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||    
T  7022092 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 7022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 27782068 - 27782027
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgtta 54  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  27782068 aaaatcttagtctggccggaaatcattgggtggtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 27835404 - 27835288
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || | ||||||||||||| ||||||||||||||||          || |||| ||||||||||||| |||||||||| | |||||||||    
T  27835404 aaaatctcagcctagacggaaatcatgggatggtgggtgttatgtatttttgttttataaaaggttaataaatgagattgaaatctaaggatgattattg 27835305  T
Q  112 tgccatgtcattcttga 128  Q
    || ||| ||||| ||||    
T  27835304 tgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 41819729 - 41819684
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||    
T  41819729 aaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatat 156  Q
    ||||| || |||||||||| ||||||||||||||||||| |||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  101 ggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 3890611 - 3890649
Alignment:
Q  99 aaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  3890611 aaggtgattattctgccatgtcattcttgaatttttctt 3890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 3597029 - 3597074
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| ||| |||||| |||||||||||||||||| |||||||    
T  3597029 aaatctaagggtaattattctgccatgtcattcttgaaactttctt 3597074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 6108221 - 6108286
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||||||||    
T  6108221 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatat 6108286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10044457 - 10044502
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||| ||||| |||||||||||| ||||||| |||||||||    
T  10044457 aaaatctcaatctggtcggaaatcatggagtggtggttgttatgta 10044502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 15972865 - 15972910
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| || |||||||||||| ||||||||||    
T  15972865 aaatctaagggtgattattctgtcatgtcattcttcaatctttctt 15972910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 27835441 - 27835514
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| | ||||||||||||||||| |||||| |||| ||| || ||||||| |||||||    
T  27835441 aaatctaaggatgattattttaccatgtcattcttgaatttttcttaataagatctttattgatatatagcatt 27835514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 31347733 - 31347688
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  31347733 aaaatctctgtcgggccagaaatcatggggtagtgggtgttatgta 31347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 39772789 - 39772826
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  39772789 aaatctaagggtgattattctgccatgtcattcttgaa 39772826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 22426295 - 22426136
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||    
T  22426295 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaatgtgattattgt 22426196  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22426195 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 22426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 33113907 - 33114068
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| |||||||||||||||||||||    
T  33113907 aaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattatt 33114006  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33114007 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 33114068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 24 - 168
Target Start/End: Original strand, 30385526 - 30385670
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 123  Q
    |||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30385526 ctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatt 30385625  T
Q  124 cttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  30385626 cttgaatctttcttataaaatcattcttgatatttagcattttcc 30385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 19650850 - 19650695
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  19650850 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 19650751  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19650750 gtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 19650695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 3137365 - 3137207
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  3137365 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 3137266  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3137265 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 3137207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 3456178 - 3456336
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||| ||    
T  3456178 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtg 3456277  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456278 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 3456336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 3574477 - 3574321
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||| ||||||||||||    
T  3574477 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattg 3574378  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3574377 tgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 37217004 - 37216846
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| || || | ||||||| |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37217004 aaaatctcagccttgctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37216905  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37216904 taccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 37216846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 6041998 - 6042149
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||| ||||||||||||||||||||| |||||| |          |||||| ||||||||||||||||||||||||||||||||||||||    
T  6041998 aaaatctcagcctgaccggaaatcatggggtggtggttgttattt------ttttatgaaaaattaataaatgagactgaaatctaaaggtgattattgt 6042091  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6042092 gccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctt 6042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 34482783 - 34482681
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  168 ctt 170  Q
    |||    
T  34482683 ctt 34482681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3089531 - 3089689
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  3089531 aaaatctcagcttggccggaaatcatggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 3089630  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  3089631 tgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 3089689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 37522167 - 37522323
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||     
T  37522167 aaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatta 37522266  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  37522267 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 37522323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2754831 - 2754989
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||            |||||||||||||||||||||||||||| |||||||||||||    
T  2754831 aaaatctcagcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaatttaaaggtgattat 2754930  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  2754931 tgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttcc 2754989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 48161019 - 48161178
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| || |||||||| |||||||||||||||||||||||           |||||| ||||||||||||||||||||||||||||||||||||    
T  48161019 aaaatctcagcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatctaaaggtgattatt 48161118  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||    
T  48161119 gtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttcctt 48161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 33145826 - 33145980
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| |||||||| ||| ||||||||||| ||||||          ||||||| ||||||||| |||||||||||||| |||||||||||    
T  33145826 aaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatctaagggtgattattg 33145925  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33145926 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 36864969 - 36864824
Alignment:
Q  26 ggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattct 125  Q
    |||||||||||||||| ||||||||||||||||         ||||||  |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  36864969 ggccggaaatcatgggatggtgggtgttatgtattttttat-atgaaatgttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattct 36864871  T
Q  126 tgaatctttctt-ataaaatcattcttgatatctagcattttccttt 171  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||    
T  36864870 tgaatcttttttgataaaatcattcttgatatctagcattttccttt 36864824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 47738281 - 47738391
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  167 ccttttcatat 177  Q
    || ||| ||||    
T  47738381 ccattttatat 47738391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 26612916 - 26613017
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  167 cc 168  Q
    ||    
T  26613016 cc 26613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 40328011 - 40328104
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcctt 40328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 8361924 - 8361832
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcctt 8361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 33839645 - 33839794
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||              ||||||| |||||||||||||||||||| ||| |||||||    
T  33839645 aaaatctcaatctggccgtaaatcatggggtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactgaaatttaagggtgatt 33839744  T
Q  108 attgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33839745 attgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 42921295 - 42921399
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T
Q  167 ccttt 171  Q
     ||||    
T  42921395 tcttt 42921399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 41224414 - 41224505
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcct 41224505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 42297978 - 42298122
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||||||||||||||||||||||| | |||||||||         ||||||| |||||||||||||||||||||||| |||| |||||||    
T  42297978 aaaatctcagtctggccggaaatcatggggtggtagatgttatgtatttttttt-atgaaaggttaataaatgagactgaaatctaagggtggttattgt 42298076  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    | |||||||||||||          ||||||||||||||||||| |||||||||||    
T  42298077 gtcatgtcattcttg----------ataaaatcattcttgatatttagcattttcc 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||| || |||||||||||||||||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  167 c 167  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 24343720 - 24343820
Alignment:
Q  69 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 167  Q
    |||||| ||||||||| |||||||||||||| |||||||||  |  |||||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  168 c 168  Q
    |    
T  24343820 c 24343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 41883174 - 41883031
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||           || |||| || |||||| ||||||||||| |||| ||||||||    
T  41883174 aaaatctcagactggctagaaatcatggggtggtgggtgttatgtatttttttttttataaaaggttgataaataagactgaaatccaaagatgattatt 41883075  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttga 153  Q
     | |||||||||||||||||||||||| ||||||||||| ||||    
T  41883074 ttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 30385125 - 30385170
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  30385125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||||| |||||| |||||| |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 8361996 - 8361951
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||||||||||||||||||||||||| |||||    
T  8361996 aaaatctctgtcgggccggaaatcatggggtggtgggtgtcatgta 8361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||| |||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 34482861 - 34482824
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggt 50  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34482861 aaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40327939 - 40327984
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||    
T  40327939 aaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 42297468 - 42297513
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||    
T  42297468 aaaatctcagcctgaccggaaatcatggggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 47738219 - 47738264
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||    
T  47738219 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 47738264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 105
Target Start/End: Original strand, 11347382 - 11347476
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta--nnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtga 105  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||           |||||| |||||||||||||| ||||||||||||||||    
T  11347382 aaaatctcagagtggctagaaatcatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 9796980 - 9796935
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||| ||||||||||||||||||| |||||||    
T  9796980 aaaatctctgtcgggccgaaaatcatggggtggtgggtcttatgta 9796935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 19650888 - 19650953
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||| ||||    
T  19650888 aaatctaatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatat 19650953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 30385088 - 30385015
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| |||||||||||| |||||  |||||| |||||||| |||||||||  |||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcatt 30385015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 34482898 - 34482971
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| | |||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  34482898 aaatctaagggtgattattctaccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 34482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 58
Target Start/End: Original strand, 41224363 - 41224392
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||    
T  41224363 cggaaatcatggggtggtgggtgttatgta 41224392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 41883211 - 41883256
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||    
T  41883211 aaatttaagggtgattattctgccatgtcattcttgaatttttctt 41883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 45637826 - 45637982
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  45637826 aaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 45637925  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45637926 gccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 45637982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 24395086 - 24395241
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  24395086 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 24395185  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24395186 gccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttcc 24395241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 3962093 - 3962250
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  3962093 aaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3962192  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  3962193 gccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttcctt 3962250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 48880878 - 48880721
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||| ||||||||||    
T  48880878 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattg 48880779  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48880778 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 48880721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 42611925 - 42612082
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||||||||    
T  42611925 aaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattg 42612024  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42612025 tgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcct 42612082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 15577799 - 15577638
Alignment:
Q  15 aatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||||||||||||||| ||||||||||||||||             || ||||||||||||||||||||||||||||||||||||||||    
T  15577799 aatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 15577700  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15577699 gtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctttt 15577638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 30848683 - 30848839
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||    
T  30848683 aaaatctcagtctggccggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattg 30848782  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  30848783 tgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttcc 30848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 4974686 - 4974532
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  4974686 aaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 4974587  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4974586 tgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 34482949 - 34483108
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||              ||||||||||||||||||||| ||||||||||||||||||    
T  34482949 aaaatctcagtctggccggaaatcatggg-tggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgatt 34483047  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34483048 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 15329387 - 15329548
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||| ||||||| |            ||||||||||||||||||||||||||||||||| |||||||||    
T  15329387 aaaatctcagactggccggaaatcatggggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaatctaaaagtgattatt 15329486  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  15329487 gtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttcctttt 15329548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 25167801 - 25167651
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||||||||||||||||| |||||||||||||          ||||||||||      ||||||||||||||||||||||||||||    
T  25167801 aaaatctcagtctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagatt------tgagactgaaatctaaaggtgattattg 25167708  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25167707 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 35445567 - 35445673
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  168 cttttca 174  Q
    || ||||    
T  35445667 ctattca 35445673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 35876414 - 35876514
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  168 c 168  Q
    |    
T  35876514 c 35876514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 37477031 - 37476876
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatga-aagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||            | || || |||||||||||||||||||||| |||||||||||    
T  37477031 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgtattttttttctgtataaaatgaataaatgagactgaaatctaagggtgattattg 37476932  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    |||||||||||| || ||||||||||   |||||||||||||||||||||||||||    
T  37476931 tgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 42696197 - 42696355
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||||| |||||||||| |||||||||          ||||||  |||||||||||||||||||||||| |||||||||||    
T  42696197 aaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatctaagggtgattattg 42696296  T
Q  112 tgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 169  Q
    | ||||||||||||||||| ||| || ||||||||||| |||||||||| |||||||||    
T  42696297 taccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatcta 159  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 18037092 - 18037250
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||          |   |||  |||||||| ||||||||||||| ||||||||||||    
T  18037092 aaaatctctgtcgggccagaaatcatggggtggtgggtgttatgtatttttttttttatgagaggaataaatgtgactgaaatctaagggtgattattgt 18037191  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
     ||||||||||||| ||||||||||   |||||||| ||||||||||||||||||||||    
T  18037192 accatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttccttt 18037250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 20010049 - 20009895
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||| |||||||  |||||||||||||         || |||| ||||||||||||||| ||||||||   ||||||||||    
T  20010049 aaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatctaagtatgattattgt 20009950  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    | |||||||||||||||||||| || |||||||||||| ||||||||| ||||||    
T  20009949 gtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 15238564 - 15238655
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 15238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  95 tctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 40880706 - 40880641
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||| ||| || ||||||||  || ||||||||||||||||||||||||||||    
T  40880706 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 40880641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 36790336 - 36790271
Alignment:
Q  104 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||| |||||||||||||||||||| || |||||| |||| ||||||| |||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcc 36790271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 15238496 - 15238538
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  15238496 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||||||||  ||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35444672 - 35444714
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||||| ||||||| |||||||||| |||||||||||||    
T  35444672 aaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 37477079 - 37477141
Alignment:
Q  103 tgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||||||||||||||| ||| |||||| | |||||| |||||||||| |||||||    
T  37477079 tgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 18037055 - 18036990
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||| ||| |||||||||| ||||||||||||||| ||| |||||| | |||||| ||||||||||    
T  18037055 aaatttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatat 18036990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 25167838 - 25167911
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  25167838 aaatctaaggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 25167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 29737216 - 29737143
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| | ||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  29737216 aaatctaagggtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 36790454 - 36790527
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| ||| |||||| ||||||||||||||| ||| |||||| |||||| | |||||||||| |||||||    
T  36790454 aaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaactttcttgatatatagcatt 36790527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 9e-61; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 44094812 - 44094969
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  44094812 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 44094911  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    | ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  44094912 gtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttcctt 44094969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 36966659 - 36966492
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  36966659 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 36966560  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttttcatatac 179  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||    
T  36966559 tgccatgttattcttgaatttttcttataaaatcattcttgatatctagcattttccttcttatatac 36966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 40215102 - 40215257
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||||||||||    
T  40215102 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattg 40215201  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40215202 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 19015518 - 19015675
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  19015518 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattg 19015617  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  19015618 tgccatgtcattcttgaatttttcttataaaatcattcttgatatgtagcattttcct 19015675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 25463790 - 25463946
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||||||||    
T  25463790 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattg 25463889  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25463890 tgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 51737619 - 51737779
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  51737619 aaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 51737718  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51737719 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 51737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 13 - 171
Target Start/End: Complemental strand, 41876393 - 41876234
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  41876393 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 41876294  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41876293 tgctatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccttt 41876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 6883601 - 6883757
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||     
T  6883601 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatatta 6883700  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6883701 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 20305082 - 20304921
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||  |||||| |||||||||| ||||||||||||||||           |||||||||| ||||||||||||||||||||||||||||||||    
T  20305082 aaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttatgaaagattgataaatgagactgaaatctaaaggtgattatt 20304983  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20304982 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 20304921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 37821785 - 37821629
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37821785 aaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37821686  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37821685 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 37821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 3559731 - 3559887
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgtta-tgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||         |||||||||||||||||||||||||||| |||||||||||||||    
T  3559731 aaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaaggtgattattg 3559830  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3559831 tgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 25973533 - 25973677
Alignment:
Q  23 tctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 122  Q
    |||||||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25973533 tctggccgaaaatcatggggtggtgggtgttatgtatttttttt-atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcat 25973631  T
Q  123 tcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  25973632 tcttgaatttttcttataaaatcattcttgatatctagcattttcc 25973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 18404618 - 18404720
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  168 ctt 170  Q
    |||    
T  18404718 ctt 18404720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 9910244 - 9910086
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |            ||||||||||||||||| || |||||||||||||||||||||    
T  9910244 aaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaatctaaaggtgattat 9910145  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  9910144 tgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcc 9910086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 33786516 - 33786423
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccttt 33786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 168
Target Start/End: Complemental strand, 32000151 - 32000061
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 32000061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 19722970 - 19722894
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcc 19722894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 44690980 - 44690812
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--------atgaaagattaataaatgagactgaaatctaaaggtg 104  Q
    |||||||||||||||||||||||||||||||| |||||||||||||                 || |||||||||||||| |||||| ||||||| ||||    
T  44690980 aaaatctcagtctggccggaaatcatggggtgttgggtgttatgtatttattttttattttttataaaagattaataaataagactggaatctaagggtg 44690881  T
Q  105 attattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctttt 172  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||||    
T  44690880 attattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttttctttt 44690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 27523206 - 27523048
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||         ||||||  ||||||||| ||||| ||||| || |||||||| | |    
T  27523206 aaaatctcatcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaagttaataaataagactaaaatcaaagggtgattaatct 27523107  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcctt 170  Q
    |||||   ||||||||||||||||| ||||||||||||||||||| || ||||||||||    
T  27523106 gccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcctt 27523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 165  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 10167569 - 10167673
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||| |||  ||| |||||||||||||||| |||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  167 ccttt 171  Q
    |||||    
T  10167669 ccttt 10167673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  96 ctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 167  Q
    |||| ||||| |||| || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||||||||||||||| | ||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 40273816 - 40273861
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||    
T  40273816 aaaatctctgtcgggccggaaatcatggggtggtgggtgttatgta 40273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 52329453 - 52329508
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 131  Q
    ||||||| | |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaatc 52329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18404556 - 18404601
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||| ||| |||||||||| |||||||||||||||||||    
T  18404556 aaaatctcagtttggtcggaaatcatagggtggtgggtgttatgta 18404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| || |||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 22157425 - 22157333
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||| ||| |||||| |||  ||||||||| | ||||||||||||| ||||  || ||  || ||||| |||||||||||||||||||    
T  22157425 ttaataaataagattgaaatttaagtgtgattattctcccatgtcattcttaaatccatcataagaattcatttttgatatctagcattttcc 22157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 58
Target Start/End: Complemental strand, 32000204 - 32000173
Alignment:
Q  27 gccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||||    
T  32000204 gccggaaatcatggggtggtgggtgttatgta 32000173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33786586 - 33786543
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatg 56  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||    
T  33786586 aaaatctctgtcgggccggaaatcatggggtggtggatgttatg 33786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3559694 - 3559621
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| |||||||||||||||  ||| ||| | |||||||| |||||||||| |||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44691017 - 44691082
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatc-tttcttataaaatcattcttgatat 156  Q
    ||||||||  || |||||| |||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  44691017 aaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatat 44691082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 173
Target Start/End: Original strand, 47964 - 48124
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| ||||||||||    
T  47964 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaagatgattattgt 48063  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttttc 173  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48064 gctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccatttc 48124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 36073464 - 36073619
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  36073464 aaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 36073563  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36073564 gccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 36073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 53123145 - 53123303
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  53123145 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 53123244  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  53123245 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 53123303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 22199375 - 22199533
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  22199375 aaaatctcagcctggccagaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 22199473  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22199474 gccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcctttt 22199533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 46441958 - 46442116
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  46441958 aaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 46442057  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46442058 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 46442116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 21802273 - 21802114
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgg---gtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||         |||||||||||||||||||||||||||||||| |||||||||    
T  21802273 aaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaagggtgattat 21802174  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21802173 tgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 21802114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 47290180 - 47290340
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||||||||||||||||||||||||    
T  47290180 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattg 47290279  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47290280 taccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 47290340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 2624951 - 2625109
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  2624951 aaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 2625050  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2625051 tgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttcctt 2625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 9088984 - 9089138
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  9088984 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattg 9089083  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9089084 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 36073061 - 36073223
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-----atgaaagattaataaatgagactgaaatctaaaggtgatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||| ||    
T  36073061 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaaatctaaaggtggtt 36073160  T
Q  108 attgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36073161 attgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttcctt 36073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 7745063 - 7744906
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||| |||||||||||||| ||||||||||||||||||||||    
T  7745063 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattg 7744964  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7744963 tgcaatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcct 7744906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 44893164 - 44893007
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  44893164 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893065  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  44893064 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 44893007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 4751560 - 4751719
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  4751560 aaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 4751659  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  4751660 gtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttcctt 4751719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 10442740 - 10442581
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaagattaa-taaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| ||||||||||||||||||||||||||||||||||           |  |||||||||| ||||||||||||||||||||||||||||||    
T  10442740 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaatctaaaggtgattat 10442641  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10442640 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 10442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 44893540 - 44893696
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  44893540 aaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 44893639  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  44893640 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 44893696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 31078770 - 31078612
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||| |||||||||||| |||||||||    
T  31078770 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattg 31078671  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  31078670 tgccatgtcattcttgaattttttttataaaatcattcttgatatctagcattttcctt 31078612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 49387839 - 49387680
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| || |||||||||||||||||||||| |||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  49387839 aaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 49387740  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  49387739 gtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttcctt 49387680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 24128353 - 24128507
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  24128353 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 24128452  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    || |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  24128453 tgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 50156529 - 50156373
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||||||||||     
T  50156529 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattatta 50156431  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    || |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  50156430 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttcct 50156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  168 c 168  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 158
Target Start/End: Complemental strand, 23964416 - 23964269
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||           ||||||||||||||||||||| |||||||||||| ||||||||    
T  23964416 aaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaatctaaagatgattatt 23964317  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatct 158  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964316 atgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 17655544 - 17655699
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat--gtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||| || ||||||||||  |||         ||||||| |||||||||||||||||||||||||||| ||||||    
T  17655544 aaaatctcagcctggccggaaatcatgggatgatgggtgttatatgtatttttttt-atgaaaggttaataaatgagactgaaatctaaaggtaattatt 17655642  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
     || |||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  17655643 atgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 30563323 - 30563448
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||| ||||||||| ||||||||||||||  ||||||||||    
T  30563323 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattg 30563422  T
Q  112 tgccatgtcattcttgaatctttctt 137  Q
    || |||||||||||||||||||||||    
T  30563423 tgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37934892 - 37934735
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||         ||||||| ||||||||||||| |||||||||| ||||||||||||    
T  37934892 aaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatctaagggtgattattgt 37934793  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 169  Q
    | ||| ||||| ||||||||||||| ||||||||| || | ||||||| |||||||||    
T  37934792 gtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcct 37934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 11314144 - 11314044
Alignment:
Q  71 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcct 169  Q
    |||| ||||||||| |||||  ||||||| ||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcct 11314045  T
Q  170 t 170  Q
    |    
T  11314044 t 11314044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 37219801 - 37219905
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  167 ccttt 171  Q
    |||||    
T  37219901 ccttt 37219905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 24392854 - 24392947
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||||||   |||||||||||||||||||||||||| ||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttttcttt 24392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 42671783 - 42671939
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||| | ||||||||||| |||||||| || |||||||||          | ||||| |||| |||||||||| ||||||||   |||||||| |    
T  42671783 aaaatctcaatttggccggaaattatggggtgatgagtgttatgtttttttttttacgaaaggttaacaaatgagactcaaatctaagaatgattattat 42671882  T
Q  113 gccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  42671883 gtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 25063436 - 25063369
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25063436 gtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 25063369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 44744554 - 44744698
Alignment:
Q  19 tcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatg 118  Q
    |||||||||||||||||||| |||||||||||||||||||          | | || ||||||||| |||||||||||||| | | ||||||| | ||||    
T  44744554 tcagtctggccggaaatcatagggtggtgggtgttatgtatttttttttgt-ataggttaataaataagactgaaatctaaggataattattgagtcatg 44744652  T
Q  119 tcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||||||||||||||   | ||||||||||| |||||||||| |||||||    
T  44744653 tcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 36073349 - 36073256
Alignment:
Q  76 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||| ||||||||||||||  || |||||| || ||| |||||||| |||||||||| ||||||||||| ||  |||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcc 36073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| ||||||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 36073694 - 36073650
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgt 57  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  36073694 aaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgata 155  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt--ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24392781 - 24392826
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||    
T  24392781 aaaatctctgtcgggccggaaatcatggggtgatgggtgttatgta 24392826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 37219739 - 37219784
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||||    
T  37219739 aaaatctcagtctggccggaaatcattgggtgatggatgttatgta 37219784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 42671746 - 42671675
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 162  Q
    |||||||| |||||||||| ||||||||||||||| ||| ||| || |||||||| || ||||||| |||||    
T  42671746 aaatctaagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatatagca 42671675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 17655507 - 17655461
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||||    
T  17655507 aaatctaagggtgattattctgccatgtcattcttgaaattttctta 17655461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 9088947 - 9088910
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9088947 aaatctaagggtgattattctgccatgtcattcttgaa 9088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 23964453 - 23964518
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattctt-gaatctttcttataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||||||  ||| ||| | |||||||| ||||||||||    
T  23964453 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatat 23964518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Original strand, 44893201 - 44893238
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaa 129  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  44893201 aaatctaagggtgattattctgccatgtcattcttgaa 44893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 50156566 - 50156639
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| ||||| |||| |||||||    
T  50156566 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcatt 50156639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33530639 - 33530596
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgt 57  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||    
T  33530639 aaaatttcagcctggccggaaatcat-gggtggtgggtgttatgt 33530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 4892316 - 4892473
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||    
T  4892316 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 4892415  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4892416 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcct 4892473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 3521957 - 3521801
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  3521957 aaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 3521858  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3521857 gccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcct 3521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 25398352 - 25398512
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  25398352 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 25398451  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25398452 tgccatgtcattgttgaatttttcttataaaatcattcttgatatctagcattttcctttt 25398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33584280 - 33584124
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  33584280 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 33584181  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33584180 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33584124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 6043462 - 6043307
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  6043462 aaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 6043363  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6043362 gccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 6043307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 8145489 - 8145643
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  8145489 aaaatctcagcctggtcggaaatcatggg-tggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 8145587  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145588 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 8145643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 13 - 169
Target Start/End: Complemental strand, 37321744 - 37321587
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  37321744 aaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattg 37321645  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37321644 tgccatttcattcttgaatatttcttataaaatcattcttgatatctagcattttcct 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 14138782 - 14138938
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||    
T  14138782 aaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgt 14138881  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14138882 gccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttcct 14138938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 13 - 165
Target Start/End: Original strand, 12850915 - 12851069
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  12850915 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 12851014  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 165  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12851015 gtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 3362892 - 3363048
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||| |||||    
T  3362892 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtggttatt 3362991  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  3362992 gtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 2477750 - 2477906
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||||||||||||||||||||| ||||    
T  2477750 aaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattg 2477849  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  2477850 tgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttcc 2477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 38899677 - 38899520
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||          ||||||||||||||||||||||||||||||||||||| ||||||    
T  38899677 aaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattg 38899578  T
Q  112 tgccatgtcattcttgaa-tctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  38899577 tgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcc 38899520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 11361082 - 11360947
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||| ||| |||||||||||| |||||||||    
T  11361082 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattg 11360983  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcat 147  Q
    ||||||||||||||||||||||||||||||||||||    
T  11360982 tgccatgtcattcttgaatctttcttataaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 22913005 - 22912852
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||| ||| |||| |||||||||||||||||| |||||||||         |||| |||  |||||||||||||||||||||| ||||||||||||    
T  22913005 aaaatctctgtcgggccagaaatcatggggtggtggatgttatgtatttttttttatgagaga--aataaatgagactgaaatctaagggtgattattgt 22912908  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  22912907 gccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 4433958 - 4433845
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||| |||||||||||||||||||||||||||    
T  4433958 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgt 4433859  T
Q  113 gccatgtcattctt 126  Q
    ||||||||||||||    
T  4433858 gccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 12614633 - 12614531
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  167 cct 169  Q
    |||    
T  12614533 cct 12614531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 31640891 - 31640767
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         ||||||| ||||||||| |||    |||||||||  ||||||| |    
T  31640891 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaaggttaataaataagatatcaatctaaagtcgattattct 31640792  T
Q  113 gccatgtcattcttgaatctttctt 137  Q
    |||||||||||||||||||||||||    
T  31640791 gccatgtcattcttgaatctttctt 31640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 17545567 - 17545476
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||| ||   |||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcct 17545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 27481952 - 27482077
Alignment:
Q  29 cggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaa-tctaaaggtgattattgtgccatgtcattctt 126  Q
    ||||||||||||||||||||||||||||||          || |||| ||||||||| ||| | ||| |||||||||||||||| ||  |||||||||||    
T  27481952 cggaaatcatggggtggtgggtgttatgtattttttttttataaaaggttaataaataagattaaaaatctaaaggtgattattctgttatgtcattctt 27482051  T
Q  127 gaatctttctt-ataaaatcattctt 151  Q
    |||||||| || ||||||||||||||    
T  27482052 gaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  97 taaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 131
Target Start/End: Original strand, 13664736 - 13664792
Alignment:
Q  75 attaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatc 131  Q
    |||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaatc 13664792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 17545636 - 17545594
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttat 55  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  17545636 aaaatctctgtcgggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 31640928 - 31640973
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||    
T  31640928 aaatctaagggtggttattctgccatgtcattcttgaatctttctt 31640973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 12614483 - 12614522
Alignment:
Q  138 ataaaatcattcttgatatctagcattttccttttcatat 177  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  12614483 ataaaatcattcttgatatctagcatttttctttgcatat 12614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 3521994 - 3522059
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| |||||||||||| |||||  |||||| | |||||| ||||||||||    
T  3521994 aaatctaatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatat 3522059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 12850878 - 12850805
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||| ||||| |||||||||||| ||| |  |||||| |||||||| |||||||||| |||||||    
T  12850878 aaatctaagggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcatt 12850805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33584317 - 33584390
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  33584317 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33584390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 114; Significance: 8e-58; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 26050 - 26210
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  26050 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 26149  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26150 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 26210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 16098 - 16258
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||| |||||||||    
T  16098 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattg 16197  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16198 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctttt 16258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 8516 - 8605
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta-nnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 101  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||    
T  8516 aaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 8e-58; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 17175972 - 17175816
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  17175972 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 17175873  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17175872 taccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 33696810 - 33696969
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  33696810 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33696909  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33696910 gtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttcctt 33696969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 18365524 - 18365369
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18365524 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18365425  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18365424 gctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 18370788 - 18370633
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||  |||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18370788 aaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18370689  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18370688 gctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 18370633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 17705416 - 17705260
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||         ||||||| |||||||||||||||||||||||| ||||||||||||    
T  17705416 aaaatctcagtctggccggaaatcatgggatggtgggtgttatgtaatttttt--atgaaaggttaataaatgagactgaaatctaa-ggtgattattgt 17705320  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705319 gtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 17705260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 28675262 - 28675420
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  28675262 aaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatctaagggtgattattg 28675361  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28675362 tgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 28675420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 32702319 - 32702477
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  32702319 aaaatctgagtctagccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 32702418  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32702419 tgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcctt 32702477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 33695278 - 33695121
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  33695278 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 33695179  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||| ||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  33695178 gtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttcc 33695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 2309374 - 2309218
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||          ||||||| |||||||||||||||||||||||| |||||||||||    
T  2309374 aaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattg 2309275  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  2309274 tgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttcc 2309218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 23291035 - 23290874
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgatta 108  Q
    |||||||||| |||||| |||||||||||||| |||||||||||||             |||||||||||||||||||||||||||||||||||| ||||    
T  23291035 aaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaaatctaaaggtaatta 23290936  T
Q  109 ttgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23290935 ttgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttcctt 23290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 6031692 - 6031537
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||           || ||||||||||||||||||||||||||||||||||||||||    
T  6031692 aaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatctaaaggtgattatt 6031593  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||| || |||||    
T  6031592 gtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 18889594 - 18889470
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| || |||||||||||||||||||||||| |||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  18889594 aaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 18889495  T
Q  113 gccatgtcattcttgaatctttctt 137  Q
    ||||||||||||||||||| |||||    
T  18889494 gccatgtcattcttgaatcattctt 18889470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 29693615 - 29693718
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 166  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  167 cctt 170  Q
    ||||    
T  29693715 cctt 29693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 6127390 - 6127506
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnat--gaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||         ||  ||||||||||||||||||||||||||||||| |||||||||    
T  6127390 aaaatatcagtttggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaatctaaaagtgattatt 6127489  T
Q  111 gtgccatgtcattcttg 127  Q
    |||||||||||||||||    
T  6127490 gtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 167  Q
    |||||||||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 9752196 - 9752109
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaa 100  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||         ||||||| |||||||||||||||||||||||||    
T  9752196 aaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 25987044 - 25987089
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25987044 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 8515677 - 8515556
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||         ||||||  ||||||||| ||||||||||||||  ||||||||| |    
T  8515677 aaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaagagtgattattct 8515578  T
Q  113 gccatgtcattcttgaatcttt 134  Q
     |||||||||| || |||||||    
T  8515577 accatgtcatttttaaatcttt 8515556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 582602 - 582522
Alignment:
Q  90 tgaaatctaaaggtgattattgtgcc-atgtcattcttgaatctttctta-taaaatcattcttgatatctagcattttcc 168  Q
    |||||||||| |||||||||| |||| || |||||||| ||| ||||||| ||||||||||||||||||||| ||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcc 582522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29693552 - 29693597
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||    
T  29693552 aaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 2121059 - 2121004
Alignment:
Q  114 ccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcc 2121004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 8515723 - 8515786
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||||| ||||||||||||||| ||||| |||| |||||||| |||||||||| |||||||    
T  8515723 gtgattattctgccatgtcattcttaaatctgtcttgataaaatctttcttgatatatagcatt 8515786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagca 162  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  ||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||||||||||  | |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||| |||||| ||||||||||||||||||  ||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 9752233 - 9752278
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    |||||||| |||||||||| |||||| |||||||||||| ||||||    
T  9752233 aaatctaagggtgattattctgccatatcattcttgaatttttctt 9752278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 11548539 - 11548495
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||    
T  11548539 aaaatctctgtcgggccggaaatcatggggt-gtgggtgttatgta 11548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 8e-58; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 23268013 - 23267857
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  23268013 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 23267914  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  23267913 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 33380321 - 33380477
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnna-tgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||||||||||||||||    
T  33380321 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattg 33380420  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33380421 tgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 33380477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 35160871 - 35161029
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn---atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    |||||||||| |||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||    
T  35160871 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 35160970  T
Q  110 tgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  35160971 tgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 35161029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 9293527 - 9293370
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||    
T  9293527 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaagggtgattatt 9293428  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9293427 gtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 9293370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 164
Target Start/End: Original strand, 3989190 - 3989342
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  3989190 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattg 3989289  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatt 164  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3989290 tgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 31174785 - 31174633
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||| | |||||||    
T  31174785 aaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaaggagtttattgt 31174686  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 165  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31174685 gtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 10662001 - 10662158
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||    
T  10662001 aaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatt 10662100  T
Q  111 gtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10662101 gtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 10662158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Complemental strand, 7475459 - 7475303
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||     
T  7475459 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattatta 7475360  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    || ||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7475359 tgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 7475303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 171
Target Start/End: Original strand, 13354972 - 13355121
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtca 121  Q
    ||||||||||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13354972 ctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtca 13355071  T
Q  122 ttcttgaatctttcttataaaatcattcttgatatctagcattttccttt 171  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13355072 ttcttggatctttcttataaaatcattcttgatatctagcattttccttt 13355121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 43331092 - 43331183
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcct 169  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcct 43331183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 22592880 - 22592987
Alignment:
Q  68 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    ||||||| ||||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  165 ttcctttt 172  Q
    ||||||||    
T  22592980 ttcctttt 22592987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 21936207 - 21936321
Alignment:
Q  24 ctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcat 122  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21936207 ctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcat 21936306  T
Q  123 tcttgaatctttctt 137  Q
    ||||| ||| |||||    
T  21936307 tcttggatcattctt 21936321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 9723519 - 9723677
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn--atgaaagattaataaatgagactgaaatctaaaggtgattatt 110  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||           ||||||  | ||||||| |||||||||||||||||||||||||    
T  9723519 aaaatctcagcctcaccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaaagtgaataaataagactgaaatctaaaggtgattatt 9723618  T
Q  111 gtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 168  Q
     || |||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||    
T  9723619 ctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcc 9723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 137
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  68 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt 137  Q
    ||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 170
Target Start/End: Complemental strand, 34321042 - 34320961
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctt 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcctt 34320961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  78 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcat 147  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||| || |||||||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 16767423 - 16767378
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  16767423 aaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 40262687 - 40262527
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||  ||| |||||||| ||||||||||||||||||||||          ||||||  |||| |||| | ||||||||||||  || ||||||     
T  40262687 aaaatctcaccctgaccggaaattatggggtggtgggtgttatgtatttattttttatgaaacgttaacaaataaaactgaaatctaagagttattattc 40262588  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcctttt 172  Q
    | ||||||||||||||||||  || |  |||  ||||||||||||||||||||||||||||    
T  40262587 taccatgtcattcttgaatccatcgtgaaaatccattcttgatatctagcattttcctttt 40262527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 14941317 - 14941199
Alignment:
Q  14 aaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn----atgaaagattaataaatgagactgaaatctaaaggtgattat 109  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||             ||||||| ||||||||| ||| |||||||||| | |||||||    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgtattttttttattttatgaaaggttaataaataagattgaaatctaaggatgattat 14941218  T
Q  110 tgtgccatgtcattcttga 128  Q
    |||| ||||||||||||||    
T  14941217 tgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 37335789 - 37335744
Alignment:
Q  93 aatctaaaggtgattattgtgccatgtcattcttgaatctttctta 138  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||    
T  37335789 aatctaaaagtgattattctgccatgtcattcttgaatctttctta 37335744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 39819272 - 39819317
Alignment:
Q  123 tcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttcc 39819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||| ||| |||||||||| || |||||||||||| |||||||||| |||||||| ||||| |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 21393639 - 21393594
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||    
T  21393639 aaaatctatgtcgggccggaaatcatggggtggtgggtgttatgta 21393594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27847746 - 27847791
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    |||||||||| ||| || ||||||||||||||||||||||||||||    
T  27847746 aaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 43331026 - 43331071
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 58  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||    
T  43331026 aaaatttctgtcgggccggaaatcatggggtggtgggtgttatgta 43331071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 27847791 - 27847833
Alignment:
Q  129 atctttctt-ataaaatcattcttgatatctagcattttcctt 170  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcctt 27847833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |  |||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 13354923 - 13354858
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 156  Q
    |||||||| ||| |||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  13354923 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatat 13354858  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 21393676 - 21393749
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| | ||||||||||||| ||| |||||| | |||||  |||||||||| |||||||    
T  21393676 aaatctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcatt 21393749  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 33380284 - 33380211
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| ||||||||||  |||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  33380284 aaatctaagggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 33380211  T

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Target: scaffold0096 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 41125 - 41280
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgt 112  Q
    |||||||||| |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||    
T  41125 aaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 41224  T
Q  113 gccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
     |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41225 accatatcattcttggatctttcttataaaatcattcttgatatctagcattttcc 41280  T

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Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttg-aatctttcttataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

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Target: scaffold0204 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 4510 - 4666
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  4510 aaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 4609  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  4610 tgccatatcattcttaaatttttcttataaaatcattcttgatatctagcattttcc 4666  T

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Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

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Target: scaffold0178 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 13 - 168
Target Start/End: Original strand, 11735 - 11891
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  11735 aaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattg 11834  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  11835 tgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttcc 11891  T

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Target: scaffold0178; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

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Target: scaffold0471 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 12956 - 13110
Alignment:
Q  13 aaaatctcagtctggccggaaatcatggggtggtgggtgttatgtannnnnnnnn-atgaaagattaataaatgagactgaaatctaaaggtgattattg 111  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||| |||||||    
T  12956 aaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattg 13055  T
Q  112 tgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 166  Q
    || |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  13056 tgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcatttt 13110  T

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Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| | |||||||| ||||||||||||||||||  |||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

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Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 85577 - 85642
Alignment:
Q  102 gtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttcc 168  Q
    |||||||||||||||||| ||| || ||||||||  || ||||||||||||||||||||||||||||    
T  85577 gtgattattgtgccatgttattttttaatctttca-atcaaatcattcttgatatctagcattttcc 85642  T

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Target: scaffold0665 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  92 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatt 164  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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