View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13925_low_25 (Length: 290)

Name: NF13925_low_25
Description: NF13925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13925_low_25
NF13925_low_25
[»] chr6 (44 HSPs)
chr6 (1-290)||(29518661-29518950)
chr6 (141-287)||(16107943-16108090)
chr6 (5-124)||(10074240-10074359)
chr6 (193-290)||(2378059-2378156)
chr6 (145-290)||(2579620-2579765)
chr6 (190-290)||(10074119-10074219)
chr6 (211-287)||(3409611-3409687)
chr6 (141-290)||(2579233-2579387)
chr6 (146-290)||(10073742-10073884)
chr6 (5-94)||(2579779-2579869)
chr6 (162-288)||(33605879-33606003)
chr6 (15-116)||(26544221-26544321)
chr6 (5-96)||(2578739-2578831)
chr6 (15-124)||(2377926-2378034)
chr6 (141-285)||(2578575-2578730)
chr6 (5-105)||(2579387-2579488)
chr6 (15-124)||(3409459-3409567)
chr6 (5-105)||(16454737-16454838)
chr6 (5-64)||(2579047-2579106)
chr6 (15-105)||(16107852-16107943)
chr6 (220-290)||(10074491-10074560)
chr6 (194-287)||(16454838-16454934)
chr6 (194-286)||(6071064-6071158)
chr6 (220-267)||(35210449-35210496)
chr6 (222-281)||(8481888-8481948)
chr6 (194-251)||(12092201-12092261)
chr6 (252-290)||(26544041-26544079)
chr6 (252-290)||(29518495-29518533)
chr6 (252-290)||(32741171-32741209)
chr6 (2-55)||(2975064-2975117)
chr6 (15-63)||(35210375-35210423)
chr6 (252-287)||(3409251-3409286)
chr6 (252-290)||(3058218-3058256)
chr6 (252-290)||(14748466-14748504)
chr6 (252-290)||(35210196-35210234)
chr6 (251-287)||(3415449-3415485)
chr6 (5-61)||(12071631-12071687)
chr6 (5-108)||(33605802-33605906)
chr6 (235-290)||(2578962-2579016)
chr6 (190-256)||(2975482-2975548)
chr6 (14-73)||(10073919-10073978)
chr6 (260-290)||(2580000-2580030)
chr6 (86-124)||(14789403-14789441)
chr6 (252-289)||(1127352-1127389)
[»] chr7 (38 HSPs)
chr7 (128-290)||(7553891-7554055)
chr7 (1-112)||(37533253-37533364)
chr7 (1-115)||(37532897-37533011)
chr7 (183-287)||(14681431-14681537)
chr7 (141-256)||(48243241-48243356)
chr7 (16-133)||(22566905-22567023)
chr7 (190-287)||(40094525-40094621)
chr7 (190-286)||(30244628-30244727)
chr7 (162-277)||(37345819-37345933)
chr7 (227-286)||(37533142-37533201)
chr7 (153-287)||(30245385-30245521)
chr7 (140-290)||(45434514-45434666)
chr7 (145-290)||(1085376-1085526)
chr7 (197-290)||(30244204-30244300)
chr7 (129-225)||(47129343-47129439)
chr7 (29-122)||(14681323-14681415)
chr7 (190-279)||(45697841-45697929)
chr7 (5-73)||(1085544-1085612)
chr7 (197-290)||(22566790-22566885)
chr7 (209-290)||(30245024-30245107)
chr7 (231-290)||(30255308-30255369)
chr7 (194-273)||(10342192-10342271)
chr7 (14-109)||(28300470-28300564)
chr7 (5-109)||(47129256-47129360)
chr7 (8-96)||(37345746-37345834)
chr7 (76-124)||(45697752-45697800)
chr7 (1-97)||(8128344-8128441)
chr7 (140-253)||(28300365-28300476)
chr7 (16-96)||(40094672-40094752)
chr7 (254-286)||(14681281-14681313)
chr7 (254-290)||(29157559-29157595)
chr7 (5-41)||(30245317-30245353)
chr7 (5-41)||(30253732-30253768)
chr7 (5-64)||(45754876-45754934)
chr7 (260-290)||(1085744-1085774)
chr7 (260-290)||(7517580-7517610)
chr7 (260-290)||(36622960-36622990)
chr7 (5-41)||(30244514-30244550)
[»] scaffold0734 (1 HSPs)
scaffold0734 (128-290)||(5643-5807)
[»] chr2 (52 HSPs)
chr2 (132-286)||(3672954-3673111)
chr2 (128-290)||(36785691-36785854)
chr2 (187-288)||(5542755-5542857)
chr2 (140-287)||(7598488-7598636)
chr2 (15-134)||(29676700-29676819)
chr2 (194-290)||(40679757-40679852)
chr2 (152-290)||(38796346-38796487)
chr2 (144-279)||(42514899-42515031)
chr2 (188-288)||(14745424-14745524)
chr2 (146-290)||(28531442-28531583)
chr2 (193-288)||(40733813-40733911)
chr2 (228-290)||(37106156-37106218)
chr2 (9-94)||(36178513-36178598)
chr2 (8-124)||(14745544-14745659)
chr2 (6-109)||(7598391-7598494)
chr2 (227-290)||(36178397-36178460)
chr2 (5-73)||(37106086-37106154)
chr2 (210-290)||(29676851-29676933)
chr2 (194-277)||(41678510-41678593)
chr2 (140-252)||(6421996-6422109)
chr2 (194-283)||(30323396-30323487)
chr2 (194-290)||(30313110-30313208)
chr2 (5-124)||(5542876-5542994)
chr2 (215-282)||(40734231-40734300)
chr2 (194-287)||(33953902-33953994)
chr2 (217-287)||(40733472-40733544)
chr2 (5-64)||(6421893-6421952)
chr2 (22-108)||(40734063-40734149)
chr2 (133-243)||(23346489-23346594)
chr2 (194-287)||(33561582-33561675)
chr2 (250-287)||(5543129-5543166)
chr2 (240-290)||(31468874-31468926)
chr2 (5-61)||(42514811-42514866)
chr2 (5-64)||(23346398-23346456)
chr2 (251-290)||(36178733-36178772)
chr2 (252-286)||(14745799-14745833)
chr2 (203-256)||(34481588-34481642)
chr2 (14-64)||(35580661-35580711)
chr2 (220-286)||(37894824-37894889)
chr2 (252-290)||(41283603-41283641)
chr2 (190-271)||(35580532-35580616)
chr2 (256-288)||(37105920-37105952)
chr2 (5-60)||(6421547-6421601)
chr2 (194-233)||(33954064-33954103)
chr2 (260-290)||(962598-962628)
chr2 (252-290)||(1769884-1769922)
chr2 (224-287)||(29873668-29873732)
chr2 (260-290)||(35580851-35580881)
chr2 (18-64)||(36785883-36785928)
chr2 (232-290)||(15880233-15880293)
chr2 (262-290)||(6421387-6421415)
chr2 (128-176)||(6421632-6421679)
[»] chr8 (44 HSPs)
chr8 (183-290)||(1013999-1014107)
chr8 (174-290)||(3669973-3670090)
chr8 (147-287)||(40518470-40518609)
chr8 (140-287)||(147712-147856)
chr8 (150-290)||(18372499-18372640)
chr8 (145-248)||(3038099-3038202)
chr8 (163-290)||(45122907-45123036)
chr8 (144-287)||(8918895-8919039)
chr8 (15-124)||(9309153-9309262)
chr8 (20-124)||(1014122-1014225)
chr8 (212-290)||(6731856-6731934)
chr8 (194-290)||(18372384-18372481)
chr8 (210-290)||(9309303-9309385)
chr8 (193-287)||(30359539-30359636)
chr8 (150-290)||(18371784-18371925)
chr8 (5-124)||(3669849-3669967)
chr8 (152-290)||(18372827-18372966)
chr8 (215-284)||(34835427-34835498)
chr8 (215-284)||(34835693-34835764)
chr8 (161-286)||(9482736-9482857)
chr8 (194-290)||(18373059-18373157)
chr8 (13-109)||(147621-147718)
chr8 (5-74)||(18371921-18371989)
chr8 (140-256)||(45122515-45122627)
chr8 (197-290)||(45121784-45121878)
chr8 (250-289)||(30441071-30441110)
chr8 (15-73)||(34835047-34835104)
chr8 (251-287)||(3669678-3669714)
chr8 (211-287)||(34835160-34835236)
chr8 (5-64)||(18372221-18372279)
chr8 (210-286)||(43274699-43274777)
chr8 (194-287)||(4154411-4154506)
chr8 (231-290)||(6651476-6651533)
chr8 (7-97)||(37544395-37544485)
chr8 (6-104)||(45122792-45122890)
chr8 (22-64)||(9608932-9608974)
chr8 (260-290)||(41972158-41972188)
chr8 (6-55)||(4154614-4154663)
chr8 (141-178)||(9483047-9483084)
chr8 (15-64)||(40518244-40518292)
chr8 (252-280)||(1014383-1014411)
chr8 (262-290)||(3038418-3038446)
chr8 (262-290)||(25561944-25561972)
chr8 (260-288)||(45122040-45122068)
[»] chr3 (48 HSPs)
chr3 (15-135)||(22303820-22303940)
chr3 (187-290)||(22304495-22304599)
chr3 (150-290)||(37990767-37990908)
chr3 (222-290)||(22304208-22304276)
chr3 (146-290)||(54017944-54018090)
chr3 (190-288)||(32462689-32462790)
chr3 (15-94)||(53577537-53577616)
chr3 (144-286)||(21832475-21832614)
chr3 (197-288)||(15773127-15773220)
chr3 (6-95)||(15773017-15773106)
chr3 (183-290)||(4823578-4823685)
chr3 (7-124)||(22304358-22304476)
chr3 (140-249)||(8328259-8328368)
chr3 (190-290)||(9240079-9240179)
chr3 (128-290)||(3135201-3135364)
chr3 (214-290)||(42342218-42342296)
chr3 (140-209)||(8328154-8328222)
chr3 (15-80)||(53577656-53577721)
chr3 (170-286)||(11661858-11661977)
chr3 (21-124)||(41360014-41360116)
chr3 (5-105)||(9239975-9240075)
chr3 (252-290)||(50612580-50612618)
chr3 (225-287)||(22304079-22304143)
chr3 (210-290)||(29644709-29644792)
chr3 (8-96)||(37990881-37990969)
chr3 (69-124)||(4823507-4823563)
chr3 (15-94)||(54018104-54018184)
chr3 (5-64)||(3135040-3135098)
chr3 (19-109)||(33803143-33803234)
chr3 (194-290)||(12747880-12747977)
chr3 (252-290)||(37726496-37726534)
chr3 (252-290)||(39389062-39389100)
chr3 (174-275)||(41359904-41360008)
chr3 (214-256)||(52634889-52634931)
chr3 (5-89)||(29644811-29644898)
chr3 (215-284)||(2299930-2300000)
chr3 (252-288)||(51886553-51886589)
chr3 (260-290)||(1634443-1634473)
chr3 (260-290)||(8327904-8327934)
chr3 (260-290)||(25739553-25739583)
chr3 (260-290)||(39336357-39336387)
chr3 (249-286)||(3384398-3384435)
chr3 (262-290)||(11661537-11661565)
chr3 (262-290)||(32463029-32463057)
chr3 (128-196)||(33803094-33803161)
chr3 (262-290)||(35946524-35946552)
chr3 (262-290)||(45901715-45901743)
chr3 (262-290)||(52634678-52634706)
[»] chr4 (47 HSPs)
chr4 (131-287)||(39404273-39404425)
chr4 (146-287)||(2740956-2741098)
chr4 (4-286)||(44621160-44621452)
chr4 (140-290)||(54108796-54108943)
chr4 (128-290)||(20826086-20826247)
chr4 (15-97)||(45496723-45496805)
chr4 (15-119)||(3340979-3341083)
chr4 (15-135)||(10246092-10246212)
chr4 (194-290)||(44620592-44620690)
chr4 (128-256)||(16889315-16889444)
chr4 (193-289)||(18932887-18932983)
chr4 (195-290)||(36629172-36629267)
chr4 (146-290)||(49076574-49076722)
chr4 (15-124)||(41370529-41370637)
chr4 (128-290)||(45489457-45489622)
chr4 (29-124)||(18933008-18933102)
chr4 (140-240)||(22028163-22028263)
chr4 (14-109)||(20826008-20826104)
chr4 (209-290)||(3244577-3244657)
chr4 (217-286)||(3341083-3341154)
chr4 (5-106)||(23817572-23817674)
chr4 (230-290)||(52884856-52884917)
chr4 (5-54)||(19895457-19895506)
chr4 (20-95)||(2740868-2740943)
chr4 (190-241)||(41707340-41707392)
chr4 (231-290)||(41370673-41370731)
chr4 (9-64)||(49076768-49076822)
chr4 (5-66)||(22028301-22028362)
chr4 (252-290)||(41370349-41370387)
chr4 (252-286)||(49880152-49880186)
chr4 (252-290)||(50788109-50788147)
chr4 (252-290)||(55933250-55933288)
chr4 (141-214)||(43174405-43174477)
chr4 (229-290)||(22028087-22028150)
chr4 (250-290)||(50630881-50630921)
chr4 (9-40)||(6876060-6876091)
chr4 (252-283)||(18933103-18933134)
chr4 (5-94)||(31691316-31691404)
chr4 (5-64)||(44620821-44620879)
chr4 (260-290)||(2740700-2740730)
chr4 (217-247)||(5882092-5882122)
chr4 (260-290)||(52884695-52884725)
chr4 (261-290)||(16888942-16888971)
chr4 (257-290)||(50002423-50002456)
chr4 (5-37)||(27426771-27426803)
chr4 (262-290)||(34646775-34646803)
chr4 (262-290)||(41707590-41707618)
[»] chr1 (51 HSPs)
chr1 (194-290)||(3537275-3537372)
chr1 (187-290)||(44290586-44290690)
chr1 (187-290)||(50051779-50051883)
chr1 (183-290)||(48588616-48588724)
chr1 (15-290)||(34364679-34364955)
chr1 (141-290)||(37555990-37556141)
chr1 (5-124)||(48588739-48588857)
chr1 (5-124)||(50051902-50052020)
chr1 (5-133)||(26661766-26661894)
chr1 (15-105)||(44290720-44290809)
chr1 (193-290)||(22077623-22077719)
chr1 (170-289)||(26661651-26661773)
chr1 (144-290)||(22077250-22077393)
chr1 (24-121)||(11977128-11977224)
chr1 (158-290)||(66216-66349)
chr1 (190-290)||(47379913-47380012)
chr1 (145-245)||(41184198-41184298)
chr1 (140-287)||(41157254-41157402)
chr1 (7-124)||(48588364-48588481)
chr1 (190-290)||(30630766-30630866)
chr1 (5-96)||(66377-66468)
chr1 (194-279)||(24448212-24448296)
chr1 (5-104)||(22077392-22077491)
chr1 (15-109)||(34649611-34649705)
chr1 (9-64)||(31767099-31767153)
chr1 (5-63)||(9956071-9956129)
chr1 (250-290)||(44290953-44290993)
chr1 (191-287)||(50469212-50469306)
chr1 (180-245)||(3537495-3537562)
chr1 (233-289)||(11977251-11977309)
chr1 (5-108)||(22077722-22077825)
chr1 (190-256)||(1188392-1188457)
chr1 (5-55)||(37850547-37850597)
chr1 (252-290)||(41759475-41759513)
chr1 (24-64)||(3537456-3537496)
chr1 (251-290)||(45494106-45494146)
chr1 (252-287)||(3550712-3550747)
chr1 (214-278)||(47380258-47380323)
chr1 (6-36)||(30207967-30207997)
chr1 (18-52)||(30630586-30630620)
chr1 (252-282)||(32168823-32168853)
chr1 (260-290)||(41142372-41142402)
chr1 (252-290)||(50052151-50052189)
chr1 (254-287)||(32594847-32594880)
chr1 (140-209)||(34649699-34649767)
chr1 (251-288)||(44043908-44043944)
chr1 (262-290)||(17294579-17294607)
chr1 (262-290)||(34649440-34649468)
chr1 (260-288)||(37850730-37850758)
chr1 (15-106)||(41157166-41157257)
chr1 (5-64)||(41184343-41184403)
[»] chr5 (49 HSPs)
chr5 (140-286)||(624077-624222)
chr5 (128-290)||(13415888-13416051)
chr5 (187-290)||(6500749-6500852)
chr5 (148-290)||(3295143-3295287)
chr5 (197-287)||(24489335-24489424)
chr5 (194-287)||(36522027-36522120)
chr5 (209-290)||(26074910-26074993)
chr5 (194-290)||(31509555-31509653)
chr5 (5-122)||(6500612-6500729)
chr5 (5-124)||(9498534-9498651)
chr5 (190-290)||(13785737-13785837)
chr5 (174-255)||(9498411-9498493)
chr5 (128-290)||(26074477-26074642)
chr5 (197-286)||(36522369-36522459)
chr5 (13-112)||(32487563-32487661)
chr5 (14-108)||(38427391-38427486)
chr5 (233-290)||(26074274-26074330)
chr5 (140-249)||(35150607-35150719)
chr5 (252-290)||(5723919-5723957)
chr5 (19-96)||(26075063-26075140)
chr5 (252-290)||(32487386-32487424)
chr5 (164-256)||(38427461-38427553)
chr5 (6-109)||(13416033-13416136)
chr5 (5-59)||(299652-299706)
chr5 (252-290)||(623810-623848)
chr5 (15-96)||(26074400-26074482)
chr5 (252-286)||(27502168-27502202)
chr5 (257-290)||(36492345-36492378)
chr5 (15-106)||(623989-624080)
chr5 (228-272)||(15370380-15370426)
chr5 (9-63)||(3622828-3622882)
chr5 (252-290)||(6500443-6500480)
chr5 (260-290)||(12662780-12662810)
chr5 (14-64)||(24489516-24489566)
chr5 (5-54)||(25328097-25328147)
chr5 (260-290)||(35150007-35150037)
chr5 (15-109)||(35150515-35150613)
chr5 (260-290)||(36568695-36568725)
chr5 (260-290)||(40296443-40296473)
chr5 (261-290)||(299490-299519)
chr5 (253-290)||(41170627-41170664)
chr5 (262-290)||(1028645-1028673)
chr5 (252-288)||(5660290-5660326)
chr5 (251-287)||(9498785-9498821)
chr5 (260-288)||(15370099-15370127)
chr5 (203-251)||(31865902-31865950)
chr5 (5-61)||(35150167-35150223)
chr5 (260-288)||(35150747-35150775)
chr5 (260-288)||(35151038-35151066)
[»] scaffold0391 (5 HSPs)
scaffold0391 (128-286)||(1238-1398)
scaffold0391 (152-290)||(3113-3254)
scaffold0391 (145-254)||(1464-1575)
scaffold0391 (25-106)||(1383-1465)
scaffold0391 (5-93)||(1591-1679)
[»] scaffold0078 (2 HSPs)
scaffold0078 (174-290)||(5268-5387)
scaffold0078 (15-124)||(5155-5262)
[»] scaffold0702 (2 HSPs)
scaffold0702 (193-290)||(270-367)
scaffold0702 (15-124)||(392-500)
[»] scaffold0113 (2 HSPs)
scaffold0113 (194-290)||(39771-39868)
scaffold0113 (5-61)||(39616-39672)
[»] scaffold0171 (1 HSPs)
scaffold0171 (213-287)||(17587-17663)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 29518661 - 29518950
Alignment:
Q  1 ccgcgctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatgg 100  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29518661 ccgcgctcctctcataacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgacgg 29518760  T
Q  101 tacaagcagcaagtggctccttgtacggcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518761 tacaagcagcaagtggctccttgtacggcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagct 29518860  T
Q  201 tccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29518861 tccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 29518950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 16107943 - 16108090
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacac 240  Q
    |||||||||||||| ||||| | ||||||||||||||| ||  || | ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  16107943 aagcagtgtcggtctgtttgcgaagaaaccagcaacggcgatgcaag-aaagtaagagcttccgcttgaaggggagcatgatgaattgatggactcacac 16108041  T
Q  241 ttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||  || | |||||||||||||||||| |||||||    
T  16108042 ttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatc 16108090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 10074359 - 10074240
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||  |||||||||  | |||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||| |||||||| ||||||    
T  10074359 gctccccttgtgacccaactcttgtatcagagccccggttcgaagaagggtacgaccgaggccgccggtcagttgcgcagaaagtagcaacgacggtaca 10074260  T
Q  105 agcagcaagtggctccttgt 124  Q
    ||||||||||||||| ||||    
T  10074259 agcagcaagtggctcattgt 10074240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 2378059 - 2378156
Alignment:
Q  193 taagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2378059 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 2378156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 145 - 290
Target Start/End: Complemental strand, 2579765 - 2579620
Alignment:
Q  145 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgatggactcacacttg 243  Q
    |||| |||||| |||| |||||||||| |||| |||| |||  |||||||||||||| |||||| ||||||| || ||||||| || |||||||||||||    
T  2579765 agtgacggtccatttgcggagaaaccaacaacagagatacaaacaaagtaagagctttcgcttgaagggggaccatgatgaatagacggactcacacttg 2579666  T
Q  244 agggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||| ||||||| ||| ||| ||||||||||||||||||||||||||    
T  2579665 agggagagtgtt-gttagcaggtgtgagttatatgtcccacatcgga 2579620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 10074219 - 10074119
Alignment:
Q  190 aagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||| ||||||||||| ||||||||||    
T  10074219 aagtaagagcttccgcttgaagggggagcatgatgaattgatagactcgcacttgagggggagtgtt-gtgtgcaagggtgagttatatatcccacatcg 10074121  T
Q  289 ga 290  Q
    ||    
T  10074120 ga 10074119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 3409611 - 3409687
Alignment:
Q  211 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3409611 ggggagcacgttaaagtgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtaccacatc 3409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 141 - 290
Target Start/End: Complemental strand, 2579387 - 2579233
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgag-ggggagcac---gatgaattgatggactc 236  Q
    |||| ||||||||| |||||  |||||||||||||||| || |||  ||| ||||||||||||||||||  ||||||||    ||||||| |||||||||    
T  2579387 aagcggtgtcggtctgtttgcagagaaaccagcaacggcgatacaaacaa-gtaagagcttccgcttgaaaggggagcaacatgatgaatagatggactc 2579289  T
Q  237 acacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||  || | ||||||| |||||||||||||||||||||    
T  2579288 acacttgagggggagtgttgttgtgtacaagtgttagttatatgtcccacatcgga 2579233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 10073884 - 10073742
Alignment:
Q  146 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttga 244  Q
    ||||||||||||| | |||||||||| |||| | || ||| | ||||||||| ||||||||||| |||||| || ||||||||||||||||||||||| |    
T  10073884 gtgtcggtccgtt-gcggagaaaccatcaacagtgatacaag-aaagtaagaccttccgcttgaagggggaacatgatgaattgatggactcacacttaa 10073787  T
Q  245 gggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    | ||| ||||| || ||||||||| |||||||||||||||||||||    
T  10073786 gagggggtgtt-gtgtgcaagtgttagttatatgtcccacatcgga 10073742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 2579869 - 2579779
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaa 94  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| | ||| ||| | ||||||||||||||||||    
T  2579869 gctcccctcattacccaacagtggtatcagagccccggttccacgaagggtacgaccgaggcagccagttcgtttgcgcagaaagcagcaa 2579779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 33605879 - 33606003
Alignment:
Q  162 ggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg 261  Q
    ||||||||||||||||  || ||| |||| ||||||||||||||| || |  | ||||| |||||||||||||||||||||||||||||||| | || ||    
T  33605879 ggagaaaccagcaacgacgatacaagcaa-gtaagagcttccgctcgaagaagggcacggtgaattgatggactcacacttgagggggagtgat-gtgtg 33605976  T
Q  262 caagtgtgagttatatgtcccacatcg 288  Q
    ||| ||| |||||||||||||||||||    
T  33605977 caaatgtaagttatatgtcccacatcg 33606003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 26544221 - 26544321
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||| | ||||| || ||||| ||||||| |||||| |||||||| ||||||||    
T  26544221 tgacccaacactggtattagagccccggttcgatgaagggtgcgaccgaggcagccgg-tatttgcgtagaaagccgcaacgctggtacaaacagcaagt 26544319  T
Q  115 gg 116  Q
    ||    
T  26544320 gg 26544321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 2578831 - 2578739
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacg 96  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| | ||||||  | ||| ||||||||||||||||    
T  2578831 gctcccctcatgaatcaacagtggtatcagagccccggttcgacgaagggtacgaccgaggcagccggtccgcttgggcagaaagcagcaacg 2578739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 2377926 - 2378034
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | ||| | |||||| ||||||  |||||    |||||||||||||||    
T  2377926 tgacccaacagtggtatcagagccccggttcgacgaagggtgcaaccgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagt 2378024  T
Q  115 ggctccttgt 124  Q
    ||||||||||    
T  2378025 ggctccttgt 2378034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 2578730 - 2578575
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg---------aggggg-agcacgatgaattgat 230  Q
    |||||||||||||| ||||| |||||||||| |||||| || ||| |||| ||||||||||||||||          |||| | |||| ||||||| |||    
T  2578730 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaagcaa-gtaagagcttccgcttccgcttgaaaagggagcagcatgatgaatagat 2578632  T
Q  231 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccaca 285  Q
    ||||||||||||||||||||||||||  || | ||||||||||||||||||||||||    
T  2578631 ggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccaca 2578575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 2579488 - 2579387
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt-tagttgcgcagaaagcagcaacgatggtac 103  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||| ||| |||||||| | ||||||  | ||||||||||||||||||||  |||||    
T  2579488 gctcccctcacgaatcaacagtggtatcagagccccggttcgacgaacggtacgaccgaggcagccggtccacttgcgcagaaagcagcaacggcggtac 2579389  T
Q  104 aa 105  Q
    ||    
T  2579388 aa 2579387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 3409459 - 3409567
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    |||||||| |||||||||||||||||||||||||||||  |  ||||||| | ||||| | |||||| | ||||||||||||  |||||||| |||||||    
T  3409459 tgacccaatagtggtatcagagccccggttcgacgaagtatatgaccgaggcagccgg-tcgttgcgtaaaaagcagcaacggcggtacaagtagcaagt 3409557  T
Q  115 ggctccttgt 124  Q
    ||||||||||    
T  3409558 ggctccttgt 3409567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 16454737 - 16454838
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtac 103  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    |||||  | |||||||||||||| |||||| |||||    
T  16454737 gctcccctcgtgacccaacagtggtatcagagcccaggttcgacgaagggtacgaccgaggtaaccggtccgtttgcgcagaaagcaacaacgacggtac 16454836  T
Q  104 aa 105  Q
    ||    
T  16454837 aa 16454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 2579106 - 2579047
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  2579106 gctcccctcatgacccaacagtgatatcagagtcccggttcgacgaagggtacgaccgag 2579047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 16107852 - 16107943
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt-tagttgcgcagaaagcagcaacgatggtacaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||  | ||| ||||||||||||||||  |||||||    
T  16107852 tgacccaacagtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaa 16107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 290
Target Start/End: Complemental strand, 10074560 - 10074491
Alignment:
Q  220 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||||| | |||||||||||||    
T  10074560 gatgaattgatggactcacacttaagggggagtgtt-gtgtgcaagtgtgagttagaggtcccacatcgga 10074491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 16454838 - 16454934
Alignment:
Q  194 aagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||||||||  || | ||| |||||||||| |||||||||||    
T  16454838 aagagcttccgcttgaagggggagcatgctgaattgatggagtcacagttgagggggagtgttgttgtgtacaaatgtgagttatgtgtcccacatc 16454934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 6071064 - 6071158
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    ||||||||||| || ||||| ||||| |||||||||||||||||||| ||||||||  || |||| || |||||||||||||||||||||||||||    
T  6071064 aagagcttccgtttaaggggtgagcatgatgaattgatggactcacatttgaggggaagattgtt-gtgtgcaagtgtgagttatatgtcccacat 6071158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 35210449 - 35210496
Alignment:
Q  220 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtg 267  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  35210449 gatggattgatggactcacacttgagggggagtgttggtttgcaagtg 35210496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 8481888 - 8481948
Alignment:
Q  222 tgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcc 281  Q
    ||||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||    
T  8481888 tgaattgatggactcacacttgagggggagattgtt-gtgtgcaagtgtgagttatatgtcc 8481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 12092261 - 12092201
Alignment:
Q  194 aagagcttccgcttgaggggg---agcacgatgaattgatggactcacacttgagggggag 251  Q
    ||||||||||||| |||||||   |||| ||||||||||||||||||||||||||||||||    
T  12092261 aagagcttccgctagaggggggtgagcatgatgaattgatggactcacacttgagggggag 12092201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 26544041 - 26544079
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26544041 tgttggtttgcaagtgtgagttatatgtcccacatcgga 26544079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 29518495 - 29518533
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29518495 tgttggtttgcaagtgtgagttatatgtcccacatcgga 29518533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 32741171 - 32741209
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32741171 tgttggtttgcaagtgtgagttatatgtcccacatcgga 32741209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 2975064 - 2975117
Alignment:
Q  2 cgcgctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggt 55  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||    
T  2975064 cgcgctcctctcatgatccaacagtgatatcagagccccggttcgaagaagggt 2975117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 35210375 - 35210423
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 63  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||    
T  35210375 tgacccaacagtggtatcaaagcctcggttcgacgaagggtacgaccga 35210423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 3409251 - 3409286
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||||||||||||||||||||    
T  3409251 tgttggtttgcaagtgtgagttatatgtcccacatc 3409286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 3058218 - 3058256
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  3058218 tgttggtttgcaagtgttagttatatgtcccacatcgga 3058256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 14748504 - 14748466
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  14748504 tgttgatttgcaagtgtgagttatatgtcccacatcgga 14748466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 35210196 - 35210234
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  35210196 tgttggtttgcaagtgtgagttatatgtctcacatcgga 35210234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 3415449 - 3415485
Alignment:
Q  251 gtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||| ||||||||||||||||||||||||    
T  3415449 gtgttggtttgcgagtgtgagttatatgtcccacatc 3415485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12071687 - 12071631
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgacc 61  Q
    ||||||||||||||| |||||||||||||||| |||| ||||| |||| || |||||    
T  12071687 gctcccctcatgacctaacagtggtatcagagtcccgattcgatgaagagtacgacc 12071631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 33605802 - 33605906
Alignment:
Q  5 gctcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtac 103  Q
    |||||||||| |||| |||||||||||| ||||||| | | |||||||||||  ||||||| | |||| |  |||||| ||||| ||||||||| | |||    
T  33605802 gctcccctcaatgacacaacagtggtattagagccctgctacgacgaagggtaggaccgaggcagccgatccgttgcggagaaaccagcaacgacgatac 33605901  T
Q  104 aagca 108  Q
    |||||    
T  33605902 aagca 33605906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 290
Target Start/End: Complemental strand, 2579016 - 2578962
Alignment:
Q  235 tcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||| |||||||    
T  2579016 tcacacttgagggggagtgttg-tgagcaagtgtgatttatatgtccctcatcgga 2578962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 2975482 - 2975548
Alignment:
Q  190 aagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    |||||||||||||||||| | |||||| || ||||||| |||| ||||||||||| ||||||||||||    
T  2975482 aagtaagagcttccgcttaaagggggaacatgatgaatagatgcactcacacttg-gggggagtgttg 2975548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 10073978 - 10073919
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt 73  Q
    ||||||||||| |||||||||| ||||||||| ||||| ||| |||||||| | ||||||    
T  10073978 atgacccaacaatggtatcagatccccggttcaacgaaaggtacgaccgaggcagccggt 10073919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 2580030 - 2580000
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  2580030 tgcaagtgtgagttatatgtcccacatcgga 2580000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 14789441 - 14789403
Alignment:
Q  86 aagcagcaacgatggtacaagcagcaagtggctccttgt 124  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  14789441 aagcagcaacgacggtaaaagcagcaagtggctccttgt 14789403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 1127352 - 1127389
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgg 289  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  1127352 tgttggtttgcaactgtgagttatatatcccacatcgg 1127389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 5e-65; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 7553891 - 7554055
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 227  Q
    |||| ||| ||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7553891 gcaatggcggtgcaagcagtgttggtccgtttgcagagaaaccagcaacggcgacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 7553990  T
Q  228 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  7553991 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 7554055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37533364 - 37533253
Alignment:
Q  1 ccgcgctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatgg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||    
T  37533364 ccgcgctcccctcgtgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacgacgg 37533265  T
Q  101 tacaagcagcaa 112  Q
    ||||||||||||    
T  37533264 tacaagcagcaa 37533253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 37533011 - 37532897
Alignment:
Q  1 ccgcgctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatgg 100  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |    
T  37533011 ccgcgctcccatcgtgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgcagaaagcagcaacgactg 37532912  T
Q  101 tacaagcagcaagtg 115  Q
    |||||||||||||||    
T  37532911 tacaagcagcaagtg 37532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 183 - 287
Target Start/End: Original strand, 14681431 - 14681537
Alignment:
Q  183 acatgcaaagtaagagcttccgcttga--gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtc 280  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14681431 acatgcaaagtaagagcttccgcttgaaggggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtaagttatatgtc 14681530  T
Q  281 ccacatc 287  Q
    |||||||    
T  14681531 ccacatc 14681537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 48243356 - 48243241
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcaca 239  Q
    ||||||||||||| |||| | ||||||||||||||||| || ||| |||| |||||| ||||| ||||| ||||||||| |||||||||||||| |||||    
T  48243356 aagcagtgtcggttcgttggcggagaaaccagcaacggcgatacaagcaa-gtaagaacttccacttgaagggggagcatgatgaattgatggattcaca 48243258  T
Q  240 cttgagggggagtgttg 256  Q
    |||||||||||||||||    
T  48243257 cttgagggggagtgttg 48243241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 22567023 - 22566905
Alignment:
Q  16 gacccaacagtggtatcagagcccc-ggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||| ||||||||||||||||| ||| ||||||||||| ||||| || || ||||||||||| ||||||| |||||| || |||||||| |||||||    
T  22567023 gacccaatagtggtatcagagcccccggtccgacgaagggtacgaccaaggccaccggttagttgtgcagaaaacagcaaagacggtacaagaagcaagt 22566924  T
Q  115 ggctccttgtacggcaacg 133  Q
    |||||||||| | ||||||    
T  22566923 ggctccttgtgcagcaacg 22566905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 287
Target Start/End: Complemental strand, 40094621 - 40094525
Alignment:
Q  190 aagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||||||||||| ||| |||||||| || |||||||||||||||||||||| |||||    
T  40094621 aagtaagagcttccgcttgagggagagcgtgatgaatagatggactcacactttaggaggagtgtt-gtgtgcaagtgtgagttatatgtccaacatc 40094525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 30244628 - 30244727
Alignment:
Q  190 aagtaagagcttccgcttgagggggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||| | |||||||| ||||||   |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||    
T  30244628 aagtaagagcttccgcttcaaggggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacat 30244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 37345819 - 37345933
Alignment:
Q  162 ggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggttt 260  Q
    ||||||| ||||||||| || ||| |||| |||| ||||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||| || |    
T  37345819 ggagaaagcagcaacggcgatacaagcaa-gtaaaagcttccacttgacgggggagcacgatgaattgatgaactcacacttgaaggggagtgtt-gtgt 37345916  T
Q  261 gcaagtgtgagttatat 277  Q
    |||||||||||||||||    
T  37345917 gcaagtgtgagttatat 37345933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 37533201 - 37533142
Alignment:
Q  227 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37533201 tgatggactcacgcttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 37533142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 287
Target Start/End: Original strand, 30245385 - 30245521
Alignment:
Q  153 tccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatg-aattgatggactcacacttgagggggag 251  Q
    |||||||| | ||| | ||||||||| || ||| |||| ||||||||||||||||||||||||||| |||| ||  || |||| |||||||||||||||     
T  30245385 tccgtttgcgcagagagcagcaacggcgatacaagcaa-gtaagagcttccgcttgagggggagcatgatgaaaaagacggacacacacttgagggggac 30245483  T
Q  252 tgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||  || ||||||||||||||||||||||||||||    
T  30245484 tgttgttgtgtgcaagtgtgagttatatgtcccacatc 30245521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 45434514 - 45434666
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaaga--gcttccgcttga-gggggagcacgatgaattgatggactc 236  Q
    |||| |||||||||| ||||| |||||||| |||||||| || ||| |||| |||| |  |||||||||||| ||||||||| |||||||||| ||||||    
T  45434514 caagtagtgtcggtctgtttgcggagaaactagcaacggcgatacaagcaa-gtaaaaaagcttccgcttgaagggggagcatgatgaattgaaggactc 45434612  T
Q  237 acacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| ||||| ||  | || | ||||||| |||||||||||||||||||||    
T  45434613 acacttgggggggtgttgttgtgtacaagtgtaagttatatgtcccacatcgga 45434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 290
Target Start/End: Complemental strand, 1085526 - 1085376
Alignment:
Q  145 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgatgg--actcacact 241  Q
    |||||||||||||||| ||||||||||||||| | || ||| || |||||||||||||| |||| ||||| |||| ||||||  |||||  |||||||||    
T  1085526 agtgtcggtccgtttgcggagaaaccagcaacagcgatacaagc-aagtaagagcttccccttgaaggggtagcatgatgaaaagatggacactcacact 1085428  T
Q  242 tgagggggagtgttg--gtttgcaagtgtgag-ttatatgtcccacatcgga 290  Q
    ||| |||||||||||  || |||||||||||| || ||||||||| ||||||    
T  1085427 tgaaggggagtgttgttgtgtgcaagtgtgagtttttatgtcccatatcgga 1085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 290
Target Start/End: Original strand, 30244204 - 30244300
Alignment:
Q  197 agcttccgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||| | ||||||| ||||| | |||| ||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||    
T  30244204 agcttccgcttgaagagggagcatgatgactagatgaactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgga 30244300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 47129343 - 47129439
Alignment:
Q  129 caacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaa 225  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||   | ||| || ||||||||||||||||||| |||||||||| ||||||    
T  47129343 caacggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacaagc-aagtaagagcttccgcttgaagggggagcatgatgaa 47129439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 14681323 - 14681415
Alignment:
Q  29 tatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagtggctcctt 122  Q
    |||||||||||||||| || |||||||||||||||| | ||||||| |||||||||||||| |||||   ||||||| |||||| |||||||||    
T  14681323 tatcagagccccggttggatgaagggtgcgaccgaggcagccggtt-gttgcgcagaaagccgcaacagcggtacaaacagcaaatggctcctt 14681415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 279
Target Start/End: Original strand, 45697841 - 45697929
Alignment:
Q  190 aagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgt 279  Q
    |||||||||||||||||||| |||||||| ||||||| |||  |||||||||||||| |||||||| || ||||||||| | ||||||||    
T  45697841 aagtaagagcttccgcttgaaggggagcatgatgaatagataaactcacacttgaggaggagtgtt-gtgtgcaagtgtcatttatatgt 45697929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 1085612 - 1085544
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt 73  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||| | ||||||    
T  1085612 gctcccctcatgacccaacagtggtatcatagccccggttcgatgaagggtatgaccgaggcagccggt 1085544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 22566885 - 22566790
Alignment:
Q  197 agcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||   ||||||||||||| || |||| |||| ||| ||||||||||||||||  || ||||||||||||| |||||||||||||||||    
T  22566885 agcttccgctctggggggagcacgataaagtgatagactaacatttgagggggagtgttgttgtatgcaagtgtgagtaatatgtcccacatcgga 22566790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 30245024 - 30245107
Alignment:
Q  209 agggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||| ||||| | ||||||||| |||||||||||||||||||  || | |||||||||||||||||| ||||||||||    
T  30245024 agggggagcatgatgattagatggactcgcacttgagggggagtgttgttgtgtacaagtgtgagttatatgttccacatcgga 30245107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 30255308 - 30255369
Alignment:
Q  231 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||    
T  30255308 ggactcacacttgagggggagtgttgttgtgtgcaagtgtgcgttatatgtcccacatcgga 30255369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 273
Target Start/End: Original strand, 10342192 - 10342271
Alignment:
Q  194 aagagcttccgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagtt 273  Q
    |||||||||| |||||||||| |||| |||||||||  ||||||| ||||||||||||||| |||| ||||||||||||||    
T  10342192 aagagcttccacttgagggggcagcatgatgaattggcggactcatacttgagggggagtg-tggtgtgcaagtgtgagtt 10342271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 28300564 - 28300470
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    |||| |||||| |||||||||||||  | ||||||||||||| |||||||| | | ||||   ||||||||||||||||||||| |||||||||||    
T  28300564 atgaaccaacactggtatcagagcct-gattcgacgaagggtacgaccgaggcagtcggtccattgcgcagaaagcagcaacgacggtacaagcag 28300470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 47129256 - 47129360
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtac 103  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||| ||||||| |||| | ||||||  | ||||| |||||||| |||||  ||| |    
T  47129256 gctcccctcatgatccaacagtggtatcagagcccc-gttcgatgaatggtgcgatcgaggcagccggtccgtttgcgtagaaagcaacaacggcggtgc 47129354  T
Q  104 aagcag 109  Q
    ||||||    
T  47129355 aagcag 47129360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 37345746 - 37345834
Alignment:
Q  8 cccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacg 96  Q
    |||||| |||||||||||||||||||||||||||||||   ||||||| | | |||| | |||| |  |||||| ||||||||||||||    
T  37345746 cccctcttgacccaacagtggtatcagagccccggttcagtgaagggtacaatcgaggcagccgatccgttgcggagaaagcagcaacg 37345834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 45697752 - 45697800
Alignment:
Q  76 gttgcgcagaaagcagcaacgatggtacaagcagcaagtggctccttgt 124  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||    
T  45697752 gttgcgcagaaagcagcaacggcggtacaagaagcaagtggctccttgt 45697800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 8128441 - 8128344
Alignment:
Q  1 ccgcgctcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacga 97  Q
    |||| ||||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||| |||  | |||| |  |||||| ||||| |||||||||    
T  8128441 ccgcactcccctcactaacccaacagtggtatcaaagccctggttcgacgaagggtacgatcgaagcagccgttccgttgcggagaaaccagcaacga 8128344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 28300476 - 28300365
Alignment:
Q  140 caagcagtgtcggtccgtttg-tggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga--gggggagcacgatgaattgatggactc 236  Q
    |||||||||||||||| |||| |||||||||||||||||  |  ||| |||| |     ||||||||||||  || |||||| ||||||| |||||||||    
T  28300476 caagcagtgtcggtccatttgctggagaaaccagcaacgacgttacaagcaagg-----gcttccgcttgaaaggaggagcatgatgaatagatggactc 28300382  T
Q  237 acacttgagggggagtg 253  Q
    ||||||||| |||||||    
T  28300381 acacttgagagggagtg 28300365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 40094752 - 40094672
Alignment:
Q  16 gacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacg 96  Q
    |||| ||||||||||||||||||| | ||||||||||||| |||||||| | ||||||  | |||||||||||| |||||||    
T  40094752 gacctaacagtggtatcagagccctg-ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagtagcaacg 40094672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 286
Target Start/End: Original strand, 14681281 - 14681313
Alignment:
Q  254 ttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||||||||||||||||||    
T  14681281 ttggtttgcaagtgtgagttatatgtcccacat 14681313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 290
Target Start/End: Original strand, 29157559 - 29157595
Alignment:
Q  254 ttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29157559 ttggtttgcaagtgtgagttatatgtcccacaccgga 29157595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 30245317 - 30245353
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccg 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  30245317 gctccccttatgacccaacagtggtatcagagccccg 30245353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 30253732 - 30253768
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccg 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30253732 gctcccctcatgacccaacaatggtatcagagccccg 30253768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 45754876 - 45754934
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||  ||||||||||||||||||||||||||| ||||| ||||||||  |||||||    
T  45754876 gctcccccaatgacccaacagtggtatcagagcccc-gttcggcgaagggtatgaccgag 45754934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 1085774 - 1085744
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  1085774 tgcaagtgtgagttatatgtcccacatcgga 1085744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 7517580 - 7517610
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  7517580 tgcaagtgtgagttatatgtcccacatcgga 7517610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 36622960 - 36622990
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  36622960 tgcaagtgtgagttatatgtcccacatcgga 36622990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 30244514 - 30244550
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccg 41  Q
    |||||||||||||||||||| |||||||| |||||||    
T  30244514 gctcccctcatgacccaacaatggtatcaaagccccg 30244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 5643 - 5807
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5643 gcaacggcggtgcaagcagtgtcggtccgtttgcagagaaaccagtaacggcgacacatgcaaagtaagagcttccgcttgagggggagcaagatgaatt 5742  T
Q  228 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||    
T  5743 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcgcacatcgga 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 286
Target Start/End: Original strand, 3672954 - 3673111
Alignment:
Q  132 cggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgat 230  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||   | ||||||||||||| |||||||||||| || ||||||| |||||||||||    
T  3672954 cggcggtgcaagcagtgtcggtccgtttgcggagaaaccagcaacgacaatacatgcaaagtaaaagcttccgcttgaagagggagcatgatgaattgat 3673053  T
Q  231 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||| |||||||||  || |||||||||||||||||||||||||||    
T  3673054 ggactcacacttgaggaggagtgttgttgtgtgcaagtgtgagttatatgtcccacat 3673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 36785854 - 36785691
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaatt 227  Q
    |||||||| || |||||||| ||| ||||||||  |||||||||||||||  || |||  | ||||||||||||||||||||||||||||| ||||||||    
T  36785854 gcaacggcggtacaagcagtatcgatccgtttgcagagaaaccagcaacgacgataca-accaagtaagagcttccgcttgagggggagcatgatgaatt 36785756  T
Q  228 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||    
T  36785755 gatggactcacactttagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 36785691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 5542857 - 5542755
Alignment:
Q  187 gcaaagtaagagcttccgcttgaggggga-gcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 285  Q
    ||||||| ||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5542857 gcaaagttagagcttccgcttgaaggggaagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccata 5542758  T
Q  286 tcg 288  Q
    |||    
T  5542757 tcg 5542755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 7598488 - 7598636
Alignment:
Q  140 caagcagtgtc-ggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcac 238  Q
    ||||||||||| |||| ||||  |||||||||| |||||  || ||| ||||   |||||||||||||||| |||| ||| ||||||| |||||||||||    
T  7598488 caagcagtgtcaggtctgtttacggagaaaccaacaacgacgatacaagcaagtaaagagcttccgcttgaaggggggcatgatgaatagatggactcac 7598587  T
Q  239 acttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  7598588 acttgagagggagtgttggtgtgcaagtgtgagttatatgtcccacatc 7598636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 29676700 - 29676819
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||| ||| |||||| | |||||||||||||||| ||||||  |||||||||||||||    
T  29676700 tgacccaacagtggtatcagagccccggttcaacgaagggtatgactgaggccgccgatcagttgcgcagaaagcaacaacgacagtacaagcagcaagt 29676799  T
Q  115 ggctccttgtacggcaacgg 134  Q
    |||||||||| | |||||||    
T  29676800 ggctccttgtgcagcaacgg 29676819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 40679852 - 40679757
Alignment:
Q  194 aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||||||||||||| ||||||    
T  40679852 aagagcttccgcttgagggggagcatgatgaatagatggactcacacttgagggggagtgtt-gtgtgcaaatgtgagttatatgtcccatatcgga 40679757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 38796487 - 38796346
Alignment:
Q  152 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaatt-gatggactcacacttgaggggg 249  Q
    ||||||||| ||||||||||||||||  || ||| |||| |||||| ||||||||||| ||||||||| ||||||   ||||||||||||||||||||||    
T  38796487 gtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagatcttccgcttgaagggggagcatgatgaaaaagatggactcacacttgaggggg 38796389  T
Q  250 agtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||  || |||||||||||||||||||||||||||||||    
T  38796388 agtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 38796346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 42514899 - 42515031
Alignment:
Q  144 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttg 243  Q
    ||||||||||||||| | ||||||||||||||| | || ||| |||| ||||||||||||||||||| ||||||| ||||||| |||||||||||| |||    
T  42514899 cagtgtcggtccgtt-gcggagaaaccagcaacagcgatacaagcaa-gtaagagcttccgcttgagagggagcatgatgaatagatggactcacatttg 42514996  T
Q  244 agggggagtgttggtttgcaagtgtgagttatatgt 279  Q
    |||||||||||| || |||| |||||||||||||||    
T  42514997 agggggagtgtt-gtgtgcaggtgtgagttatatgt 42515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 14745524 - 14745424
Alignment:
Q  188 caaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  14745524 caaagtaagagcttccgcttgaagggggagcatgatgaatagatgtactcaaacttgagggg-agtgttggtttgcaactgtgagttatatgtcccacat 14745426  T
Q  287 cg 288  Q
    ||    
T  14745425 cg 14745424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 28531583 - 28531442
Alignment:
Q  146 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgag 245  Q
    ||||| |||||||| |||||||| || |||||  || ||| |||| |||| ||||||| ||||| ||| |||| |||||| |||||||||||||||||||    
T  28531583 gtgtcagtccgtttatggagaaagcaacaacgacgatacaagcaa-gtaatagcttccacttgaaggg-agcatgatgaactgatggactcacacttgag 28531486  T
Q  246 ggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  28531485 ggggagtgtt-gtgtgcaagtgtgagttatatgtcccacatcgga 28531442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 40733813 - 40733911
Alignment:
Q  193 taagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||  | || | |||||||||||||||||||||||||||    
T  40733813 taagagcttccgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtcccacatcg 40733911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 37106156 - 37106218
Alignment:
Q  228 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37106156 gatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 37106218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 36178598 - 36178513
Alignment:
Q  9 ccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaa 94  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||    
T  36178598 ccctcgtgacccaatagtggtatcagagccccggttcgacgaagggtgcgaccaaggccaccggtcagttgcgcagaaagcagcaa 36178513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 14745659 - 14745544
Alignment:
Q  8 cccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagc 107  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||| || | ||| | | ||| |||||||||| |||||||  ||||||||    
T  14745659 cccctcgtgacccaacagtggtatcagagccccggttcgatgaagggtgcgaccaaggcagcc-gatcgttacgcagaaagccgcaacgacagtacaagc 14745561  T
Q  108 agcaagtggctccttgt 124  Q
    | |||||||||||||||    
T  14745560 aacaagtggctccttgt 14745544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 109
Target Start/End: Original strand, 7598391 - 7598494
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaa 105  Q
    |||||||| |||||||||| |||||||| ||||| ||||||||||||||| |||| |||   ||||||  |||||||||||||||||||||| |||||||    
T  7598391 ctcccctcgtgacccaacactggtatcaaagcccaggttcgacgaagggtacgactgaggtagccggtccgttgcgcagaaagcagcaacgacggtacaa 7598490  T
Q  106 gcag 109  Q
    ||||    
T  7598491 gcag 7598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 36178460 - 36178397
Alignment:
Q  227 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36178460 tgatggactcacacttgagggggactgttggtttgcaagtgtgagttatatgtcccacttcgga 36178397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37106086 - 37106154
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt 73  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  37106086 gctccccttgtgacccaacagtggtatcagagccccggttcgacgaagggtgcgactgaggccgccggt 37106154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 29676851 - 29676933
Alignment:
Q  210 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||||  || |||| ||||||||||||||||||||||||||    
T  29676851 gggggagcacgataaagtgatggactcacacttgagggggtgtgttgttgtgtgcaggtgtgagttatatgtcccacatcgga 29676933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 41678593 - 41678510
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatat 277  Q
    |||||||||||||||||| | |||||  |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  41678593 aagagcttccgcttgaggagagagcattatgaattgatggactcacacttgaaggggagtgtt-gtgtgcaagtgtgagttatat 41678510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 6421996 - 6422109
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcac 238  Q
    |||| ||||||||| |||||| ||||||||||||||||   | ||| || |   || | ||||||||||| ||||||||| |||||||||||||||||||    
T  6421996 caagtagtgtcggttcgtttgcggagaaaccagcaacgacaatacaagctagtaaaaaacttccgcttgaagggggagcatgatgaattgatggactcac 6422095  T
Q  239 acttgagggggagt 252  Q
    ||||||||||||||    
T  6422096 acttgagggggagt 6422109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 283
Target Start/End: Original strand, 30323396 - 30323487
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtccca 283  Q
    |||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||||||  |||| || |||||||||| |||||||||||||    
T  30323396 aagagcatccgcttgagggatgagcatgatgaattgatggactcacacttgagggggagattgtt-gtgtgcaagtgtgtgttatatgtccca 30323487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 30313110 - 30313208
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||  || |||| || |||||| ||| |||||||||| |||||||||    
T  30313110 aagagcttccgcttgaggggtgagcatgatgaattgttggactcacacttgaggggaagattgtt-gtgtgcaagcgtgtgttatatgtctcacatcgga 30313208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 5542994 - 5542876
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||| ||||| |||||||||||||||||||  ||||||||||| |  ||| |||||| | | ||| | |||| ||||||||| ||||||  ||||||    
T  5542994 gctccccccatgatccaacagtggtatcagagcttcggttcgacgacgaatgcaaccgaggcagtcgg-tcgttgtgcagaaagccgcaacggcggtaca 5542896  T
Q  105 agcagcaagtggctccttgt 124  Q
    |||| |||||||||||||||    
T  5542895 agcaacaagtggctccttgt 5542876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Original strand, 40734231 - 40734300
Alignment:
Q  215 agcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtccc 282  Q
    ||||||||||||||||||| ||||||||||||||||||||  | || | |||||||||||||||||||||    
T  40734231 agcacgatgaattgatggaatcacacttgagggggagtgttattgtgtacaagtgtgagttatatgtccc 40734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 33953994 - 33953902
Alignment:
Q  194 aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||| ||||||||||||||||||||||| |   |||||   ||||||||||||||| || ||||| ||||||||||| ||||||||||    
T  33953994 aagagcttcctcttgagggggagcacgatgaattaacatactcaattttgagggggagtgtt-gtgtgcaaatgtgagttataagtcccacatc 33953902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 287
Target Start/End: Original strand, 40733472 - 40733544
Alignment:
Q  217 cacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||| ||||||||||||||||| |||||  | || | ||||||||||||||||||||||||||    
T  40733472 cacgatgaattgatagactcacacttgaggggaagtgttattgtgtacaagtgtgagttatatgtcccacatc 40733544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 6421893 - 6421952
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||| |||||| ||||||||    
T  6421893 gctcccctcatgacccaacggtggtattagagcctcggttcgacaaagggtacgaccgag 6421952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 108
Target Start/End: Original strand, 40734063 - 40734149
Alignment:
Q  22 acagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagtt-gcgcagaaagcagcaacgatggtacaagca 108  Q
    |||||||||||||||||||| |||| | |||||| |||||||| | ||||||| ||| ||||||||||||||||| | ||||||||||    
T  40734063 acagtggtatcagagccccg-ttcgtcaaagggtacgaccgaggcagccggttcgtttgcgcagaaagcagcaacaacggtacaagca 40734149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 23346489 - 23346594
Alignment:
Q  133 ggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatgg 232  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||| || ||||      |||||||||| |||||| |||| ||| ||||||| ||||     
T  23346489 ggcagtacaagcagtgtcggtctgtttgcggagaaaccagcaacggcgatacat-----ataagagcttctgcttgaaggggggcatgatgaatagatga 23346583  T
Q  233 actcacacttg 243  Q
    ||||| |||||    
T  23346584 actcatacttg 23346594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 33561675 - 33561582
Alignment:
Q  194 aagagcttccgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||| ||||| |||||||||| ||  |||||||||||||||| | ||||||| ||||| ||||| | |||||||||||||||||||| |||||||    
T  33561675 aagaacttccccttgaggggggagtgcgatgaattgatggacacgcacttgatggggaatgttg-tgtgcaagtgtgagttatatgttccacatc 33561582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 5543166 - 5543129
Alignment:
Q  250 agtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5543166 agtgttggtttgcaagtgtgagttatatgtcccacatc 5543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 31468926 - 31468874
Alignment:
Q  240 cttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  31468926 cttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 31468874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 42514811 - 42514866
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgacc 61  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  42514811 gctcccctcgtgacccaacagtggtatcagag-ccctgttcgacgaagggtacgacc 42514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 23346398 - 23346456
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||| ||||| ||||||||    
T  23346398 gctcccctcatgacccaacaatggtatcagag-cccggtttgacgtagggtacgaccgag 23346456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 36178772 - 36178733
Alignment:
Q  251 gtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36178772 gtgttagtttgcaagtgtgagttatatgtcccacatcgga 36178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 14745833 - 14745799
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||||||||||||||||||||    
T  14745833 tgttggtttgcaagtgtgagttatatgtcccacat 14745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 34481588 - 34481642
Alignment:
Q  203 cgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||    
T  34481588 cgcttgaggcgggagcgtgatgaattgatggactcacacttgagggagagtgttg 34481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 35580711 - 35580661
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||| | ||||||||||||||||||||||||||||||  |||||||    
T  35580711 atgacccaataatggtatcagagccccggttcgacgaagggtatgaccgag 35580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 37894889 - 37894824
Alignment:
Q  220 gatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    ||||||| |||||||||| |||| ||||||||| ||| | ||||| |||||||||||||||||||||    
T  37894889 gatgaatagatggactcatacttaagggggagtattg-tgtgcaaatgtgagttatatgtcccacat 37894824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 41283641 - 41283603
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  41283641 tgttggtttgcaagtgtgagttatatgtcccatatcgga 41283603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 35580616 - 35580532
Alignment:
Q  190 aagtaagagcttccgcttgaggg-ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgag 271  Q
    |||||| ||||||| ||||| || |||||| ||||||| |||||||||||||||||||| ||||| ||  || ||||||||||||    
T  35580616 aagtaaaagcttccccttgaaggaggagcatgatgaatagatggactcacacttgagggagagtgctgttgtgtgcaagtgtgag 35580532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Original strand, 37105920 - 37105952
Alignment:
Q  256 ggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||||||    
T  37105920 ggtttgcaagtgtgagttatatgtcccacatcg 37105952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 6421547 - 6421601
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgac 60  Q
    ||||||||| ||||||||||||||||||||||| || ||||||| |||||| ||||    
T  6421547 gctcccctcgtgacccaacagtggtatcagagcacc-gttcgacaaagggtacgac 6421601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 33954103 - 33954064
Alignment:
Q  194 aagagcttccgcttgagggggagcacgatgaattgatgga 233  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  33954103 aagagcttccgtttcagggggagcacgatgaattgatgga 33954064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 962598 - 962628
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcgga 962628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 1769884 - 1769922
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  1769884 tgttggtgtgcaagtgtgagttatatgtcacacatcgga 1769922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 287
Target Start/End: Complemental strand, 29873732 - 29873668
Alignment:
Q  224 aattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||||||||||||  |||| || |||||| ||| |||| ||||||||||||    
T  29873732 aattgatggactcacacttgagggggagattgtt-gtgtgcaagggtgtgttacatgtcccacatc 29873668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 35580881 - 35580851
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  35580881 tgcaagtgtgagttatatgtcccacatcgga 35580851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 36785928 - 36785883
Alignment:
Q  18 cccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  36785928 cccaacagtggtatcagagcccc-gttcgacgaagggtacgatcgag 36785883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 15880233 - 15880293
Alignment:
Q  232 gactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||| ||||| ||||||| | ||  |||||||||||||||||| ||||||||||    
T  15880233 gactcacacttaaggggaagtgttgttgtgtacaagtgtgagttatatgttccacatcgga 15880293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 6421387 - 6421415
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  6421387 caagtgtgagttatatgtcccacatcgga 6421415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 6421632 - 6421679
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaac 176  Q
    |||||| |||| ||||| ||||||||||||||| |||||||||||||||    
T  6421632 gcaacgacagtacaagc-gtgtcggtccgtttgcggagaaaccagcaac 6421679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 6e-43; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 183 - 290
Target Start/End: Complemental strand, 1014107 - 1013999
Alignment:
Q  183 acatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcc 281  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1014107 acatgcaaagtaagagcttccgcttgaagggggagtatgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgttc 1014008  T
Q  282 cacatcgga 290  Q
    |||||||||    
T  1014007 cacatcgga 1013999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 3669973 - 3670090
Alignment:
Q  174 aacggagacacatgcaaagtaagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagt 272  Q
    ||||| || |||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3669973 aacggcgatacatgcaaagtaagagcttctgcttgaagggtgagcatgatgaattgatggactcacacttgagggggactgttggtttgcaagtgtgagt 3670072  T
Q  273 tatatgtcccacatcgga 290  Q
    ||||||||||||||||||    
T  3670073 tatatgtcccacatcgga 3670090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 147 - 287
Target Start/End: Original strand, 40518470 - 40518609
Alignment:
Q  147 tgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggggg-agcacgatgaattgatggactcacacttgag 245  Q
    |||||||||||||| ||||||||||||||||  || ||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  40518470 tgtcggtccgtttgcggagaaaccagcaacgacgatacaagcaa-gtaagagcttccacttgaggggggagcatgatgaattgatggactcacacttgag 40518568  T
Q  246 ggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||| || || | ||||||||||||||||||||||||||    
T  40518569 ggggagtatt-gtgttcaagtgtgagttatatgtcccacatc 40518609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 147712 - 147856
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcac 238  Q
    ||||||||||||||||||||| |||||||||| |||||  || |||     ||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  147712 caagcagtgtcggtccgtttgcggagaaaccaacaacgacgataca-----agtaagagcttccgcttaaagggggagct-gatgaattgatggactcac 147805  T
Q  239 acttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||    
T  147806 acttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatc 147856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 290
Target Start/End: Complemental strand, 18372640 - 18372499
Alignment:
Q  150 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggggga-gcacgatgaattgatggactcacacttgagggg 248  Q
    ||||||||||| ||||||||||||| ||| ||  ||  ||||  |||||||||| ||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18372640 cggtccgtttgcggagaaaccagcagcggcgattcaaacaaataaagagcttccccttgaaggggaagcacgataaagtgatggactcacacttgagggg 18372541  T
Q  249 gagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||| | || ||||||||||||||||||||||||||||    
T  18372540 gagtgttgttgtgaaagtgtgagttatatgtcccacatcgga 18372499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 3038202 - 3038099
Alignment:
Q  145 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttga 244  Q
    |||||||||||||||| ||||||||||||||||| || |||    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  3038202 agtgtcggtccgtttgaggagaaaccagcaacggcgatacaaagcaagtaagagcttccgcttgagggggagctcgatgaattgatggactcacacttta 3038103  T
Q  245 gggg 248  Q
    ||||    
T  3038102 gggg 3038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 290
Target Start/End: Original strand, 45122907 - 45123036
Alignment:
Q  163 gagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtt 259  Q
    |||||||||||||||  || ||| |||| |||||||||||||||||| |||||| || ||||||| |||||||| ||||||||||||||||||||  ||     
T  45122907 gagaaaccagcaacgacgatacaagcaa-gtaagagcttccgcttgaagggggaacatgatgaatagatggacttacacttgagggggagtgttgctgtg 45123005  T
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  45123006 tgcaagtgtgagttatatgtcccacatcgga 45123036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 144 - 287
Target Start/End: Complemental strand, 8919039 - 8918895
Alignment:
Q  144 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttg 243  Q
    ||||||||||||||||| | ||||| ||||||||| || ||| |||| || ||||||||||||| | ||||  || ||||||| ||||||||||||||||    
T  8919039 cagtgtcggtccgtttgcgaagaaatcagcaacggcgatacaagcaa-gttagagcttccgcttaaagggggacatgatgaatagatggactcacacttg 8918941  T
Q  244 agggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||  || ||||||||||||||| ||||||||||||    
T  8918940 agggggagtgttgttgtgtgcaagtgtgagttacatgtcccacatc 8918895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 9309153 - 9309262
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    |||||||| |||||||||||| |||| |||||||| ||||| |||||||| |||||||| ||||||| |||||||| |||||| || |||||||||||||    
T  9309153 tgacccaaaagtggtatcagaaccccagttcgacggagggtacgaccgaggccgccggtcagttgcgtagaaagcaacaacgacggcacaagcagcaagt 9309252  T
Q  115 ggctccttgt 124  Q
    ||||||||||    
T  9309253 ggctccttgt 9309262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 1014225 - 1014122
Alignment:
Q  20 caacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagtggctc 119  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| | ||||| | |||||||||||||| ||||||  |||||||||||||||||||||    
T  1014225 caacagtggtatcagagccccggttcgacgaagggtacgactgaggcagccgg-tcgttgcgcagaaagccgcaacggcggtacaagcagcaagtggctc 1014127  T
Q  120 cttgt 124  Q
    |||||    
T  1014126 cttgt 1014122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 6731856 - 6731934
Alignment:
Q  212 gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6731856 gggagcatgatgaatagatggactcacatttgagggggagtgttgttttgcaagtgtgagttatatgtcccacatcgga 6731934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 18372481 - 18372384
Alignment:
Q  194 aagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||||||| | || |||||||||||||||||| |||||||||    
T  18372481 aagagcttccccttgaagggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgaaagtgtgagttatatgtctcacatcgga 18372384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 210 - 290
Target Start/End: Original strand, 9309303 - 9309385
Alignment:
Q  210 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  9309303 gggggagcacgataaagtgatggactcacaattgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 9309385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 287
Target Start/End: Original strand, 30359539 - 30359636
Alignment:
Q  193 taagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |||||  || | ||||||||||||||||||| ||||||    
T  30359539 taagagcttccgcttgaagggggagcatgataaattgatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtctcacatc 30359636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 150 - 290
Target Start/End: Complemental strand, 18371925 - 18371784
Alignment:
Q  150 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggg 248  Q
    |||| |||||| ||||||||||||| ||| || |||  ||||  |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||    
T  18371925 cggttcgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttccgcttgaagggggggcacgataaagtgatggactcacacttgagggg 18371826  T
Q  249 gagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||| || | || |   |||||||||||||| |||||||||    
T  18371825 gagtgctgttgtgtagaagtgagttatatgtcacacatcgga 18371784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 3669849 - 3669967
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||| ||||||||| ||||||||||||||||  ||| | ||||||| ||| |||| | ||||||  |||||||||||||| ||||| | ||||||    
T  3669849 gctcccctcgtgacccaacggtggtatcagagccccccttcaatgaagggtacgatcgaggcagccggtc-gttgcgcagaaagccgcaacaacggtaca 3669947  T
Q  105 agcagcaagtggctccttgt 124  Q
    |||| |||||||||||||||    
T  3669948 agcaacaagtggctccttgt 3669967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 18372966 - 18372827
Alignment:
Q  152 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg--agggggagcacgatgaattgatggactcacacttgaggggg 249  Q
    ||||||||| ||||||||||||| ||| || |||  ||||  |||||||||| | |   |||||||||||||| || |||||||||||||||||| || |    
T  18372966 gtccgtttgcggagaaaccagcagcggcgatacaaacaaataaagagcttcccccttcaagggggagcacgataaagtgatggactcacacttga-ggag 18372868  T
Q  250 agtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| | || |||||||||||||||||| |||||||||    
T  18372867 agtgttgttgtgaaagtgtgagttatatgtcacacatcgga 18372827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 34835427 - 34835498
Alignment:
Q  215 agcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccac 284  Q
    |||| |||||||||||||||||||||||||||||||||||||  || | |||| ||||||||||||||||||    
T  34835427 agcatgatgaattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccac 34835498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 34835693 - 34835764
Alignment:
Q  215 agcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccac 284  Q
    |||| |||||||||||||||||||||||||||||||||||||  || | |||| ||||||||||||||||||    
T  34835693 agcatgatgaattgatggactcacacttgagggggagtgttgctgtgtacaagggtgagttatatgtcccac 34835764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 286
Target Start/End: Complemental strand, 9482857 - 9482736
Alignment:
Q  161 tggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggttt 260  Q
    |||||||||||||||||| || ||| |||| |||||||||||||||||| |||| ||||  ||||||| ||||||  ||||||||||||||||||| | |    
T  9482857 tggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggg-gcacagtgaattgttggact--cacttgagggggagtgttgttgt 9482762  T
Q  261 gcaagtgtgagttatatgtcccacat 286  Q
    | |   ||||||||||||| ||||||    
T  9482761 gtacaagtgagttatatgttccacat 9482736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 18373157 - 18373059
Alignment:
Q  194 aagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgca-agtgtgagttatatgtcccacatcgga 290  Q
    |||||||||| ||||| ||||||||||||| || |||||||||||||||||||  ||||||||| | || | ||||||| ||||||||||||| |||||    
T  18373157 aagagcttccccttgatgggggagcacgataaagtgatggactcacacttgagatggagtgttgttgtgtacagtgtgatttatatgtcccacttcgga 18373059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 147621 - 147718
Alignment:
Q  13 catgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    ||||||||||||||| |||||||||||||||||||| |||||| ||| |||| | ||| ||  | |||||||||||||||||||   |||||||||||    
T  147621 catgacccaacagtgatatcagagccccggttcgacaaagggtacgatcgaggcagccagtccgtttgcgcagaaagcagcaacagcggtacaagcag 147718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 18371989 - 18371921
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggtt 74  Q
    |||||||||||||||||||||||||||||||| || |||||||| |||||| |||||||| | |||||||    
T  18371989 gctcccctcatgacccaacagtggtatcagag-cctggttcgacaaagggtacgaccgaggcagccggtt 18371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 45122515 - 45122627
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcac 238  Q
    ||||||||||||||||||||| |||| ||||| ||||   || |||     |||||||||||||||| || ||||||||| ||||||| || | ||||||    
T  45122515 caagcagtgtcggtccgtttgcggaggaaccaacaacatcgataca-----agtaagagcttccgctggaagggggagcatgatgaatagaagaactcac 45122609  T
Q  239 acttgagggggagtgttg 256  Q
    ||||||||||||||||||    
T  45122610 acttgagggggagtgttg 45122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 45121878 - 45121784
Alignment:
Q  197 agcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||   ||||||||||||| || |||||||||||||||| |||||||||||||  || | |||||||||||| | ||||||||||||||    
T  45121878 agcttccgctctggggggagcacgataaagtgatggactcacacttaagggggagtgttgttgtgtacaagtgtgagttgt-tgtcccacatcgga 45121784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 30441071 - 30441110
Alignment:
Q  250 agtgttggtttgcaagtgtgagttatatgtcccacatcgg 289  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30441071 agtgttggtttgcaagtgtgagttatatgtcccacatcgg 30441110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 34835047 - 34835104
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt 73  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| | ||||||    
T  34835047 tgacccaacagtggtatcagag-cccggttcgacgaagggtacgaccgaggcagccggt 34835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 3669678 - 3669714
Alignment:
Q  251 gtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||||||||||||||||||||||||||    
T  3669678 gtgttggtttgcaagtgtgagttatatgtcccacatc 3669714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 287
Target Start/End: Original strand, 34835160 - 34835236
Alignment:
Q  211 ggggagcacgatgaattgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatc 287  Q
    |||| ||| |||||||||||||||||||  |||||||||||||||| | ||  |||| |||||||||||||||||||||    
T  34835160 ggggggcatgatgaattgatggactcac--ttgagggggagtgttgctgtgtacaagggtgagttatatgtcccacatc 34835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 18372279 - 18372221
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||||||||||| ||||||||||||| || |||||||| |||||| ||||||||    
T  18372279 gctcccctcatgacccaatagtggtatcagag-cctggttcgacaaagggtacgaccgag 18372221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 43274777 - 43274699
Alignment:
Q  210 gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
    ||||||||||||| || |||||||||||||||||||||  |||||||  || | |||||||||||||||| || |||||    
T  43274777 gggggagcacgataaagtgatggactcacacttgagggacagtgttgttgtgtacaagtgtgagttatatatctcacat 43274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 4154506 - 4154411
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||||||| |||||||||| ||||| || |  |||||||||||||||||||||||||   ||||| | ||||| |||||||||||||||| |||||    
T  4154506 aagagcttctgcttgaggggtgagcatgaagttttgatggactcacacttgagggggaaattgttg-tgtgcaaatgtgagttatatgtcctacatc 4154411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 6651476 - 6651533
Alignment:
Q  231 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||  |||||| |||||||  |||||||||||||| |||||||||    
T  6651476 ggactcacacttgaggggaggtgttgttttgcaa--gtgagttatatgtctcacatcgga 6651533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 37544485 - 37544395
Alignment:
Q  7 tcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacga 97  Q
    |||||||||||||||||  || ||||||||||||  |||| |||||| ||||| |||||| ||||||| | ||| ||| |||||||||||||    
T  37544485 tcccctcatgacccaactctgatatcagagcccc-cttcgtcgaaggatgcgatcgagacagccggttcgtttgtgcataaagcagcaacga 37544395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 45122792 - 45122890
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagtt-gcgcagaaagcagcaacgatggtaca 104  Q
    |||||| ||||||| |||||||| |||||||||  | ||||||||||||| |||||||| | ||| ||  ||| |||||||||||| ||||| |||||||    
T  45122792 ctccccccatgaccaaacagtggcatcagagcctag-ttcgacgaagggtacgaccgaggcagccagtccgtttgcgcagaaagcaacaacggtggtaca 45122890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 9608932 - 9608974
Alignment:
Q  22 acagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||    
T  9608932 acagtggtatcagtgccccggttcgacaaagggtacgaccgag 9608974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 41972158 - 41972188
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  41972158 tgcaagtgtgagttatatgtcccacatcgga 41972188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 4154663 - 4154614
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggt 55  Q
    ||||| |||||||||||||||||||||| ||||  | |||||||||||||    
T  4154663 ctcccttcatgacccaacagtggtatcaaagccgagtttcgacgaagggt 4154614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 9483084 - 9483047
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacgg 178  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  9483084 aagcagtgtcggtccgtttgcggagaaaccatcaacgg 9483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 40518244 - 40518292
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||| |||| ||||||||||||||| |||||||||||||| ||||||||    
T  40518244 tgaccaaacaatggtatcagagcccc-gttcgacgaagggtacgaccgag 40518292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 1014411 - 1014383
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtc 280  Q
    |||||||||||||||||||||||||||||    
T  1014411 tgttggtttgcaagtgtgagttatatgtc 1014383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 3038446 - 3038418
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  3038446 caagtgtgagttatatgtcccacatcgga 3038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 25561972 - 25561944
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  25561972 caagtgtgagttatatgtcccacatcgga 25561944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 45122068 - 45122040
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcg 45122040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 22303940 - 22303820
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  22303940 tgacctaacagtggtatcagagccccggttcgacgaagggtgcgacagaggccgccggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagt 22303841  T
Q  115 ggctccttgtacggcaacggc 135  Q
    |||| ||||| | ||||||||    
T  22303840 ggcttcttgtgcagcaacggc 22303820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 22304495 - 22304599
Alignment:
Q  187 gcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 285  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22304495 gcaaagtaagagcttccgcttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagctatatgtcccaca 22304594  T
Q  286 tcgga 290  Q
    |||||    
T  22304595 tcgga 22304599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 150 - 290
Target Start/End: Complemental strand, 37990908 - 37990767
Alignment:
Q  150 cggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgaggggg 249  Q
    |||| |||||| | ||||||||||||||| || ||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  37990908 cggttcgtttgcgcagaaaccagcaacggcgatacatgcaaagtaaaagcttccgcttgaggggg-gcatgatgaattgatggactcacagttgaggggg 37990810  T
Q  250 agtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||  || | |||||||||||||||||| ||||||||||    
T  37990809 agtgttgttgtgtacaagtgtgagttatatgttccacatcgga 37990767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 22304208 - 22304276
Alignment:
Q  222 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22304208 tgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 22304276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 54018090 - 54017944
Alignment:
Q  146 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgag 245  Q
    ||||| ||||||||| |||||||||| |||| | || ||| ||||   |||||||||||||||||||||| || ||||||  ||||||||||||||||||    
T  54018090 gtgtcagtccgtttgcggagaaaccaacaacagtgatacaagcaagtaaagagcttccgcttgagggggaacatgatgaaaagatggactcacacttgag 54017991  T
Q  246 ggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| |||  || |||||||||||||||||||||| ||||||||    
T  54017990 ggggagtattgttgtgtgcaagtgtgagttatatgtcctacatcgga 54017944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 32462790 - 32462689
Alignment:
Q  190 aagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||    
T  32462790 aagtaagagctttcgcttgaagggggagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacat 32462691  T
Q  287 cg 288  Q
    ||    
T  32462690 cg 32462689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 53577537 - 53577616
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaa 94  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||    
T  53577537 tgacccaacagtggtatcagagtcccggttcgacgaagggtacgaccgaggccgccggtcagttgcgcagaaagcagcaa 53577616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 286
Target Start/End: Complemental strand, 21832614 - 21832475
Alignment:
Q  144 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttg 243  Q
    ||||||||||||||| | ||||||||||||||||  || ||| |||| ||| ||||||||  |||| |||||||| ||||||| ||||||||||||||||    
T  21832614 cagtgtcggtccgtt-gcggagaaaccagcaacgacgatacaagcaa-gtatgagcttccatttgatggggagcatgatgaatagatggactcacacttg 21832517  T
Q  244 agggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    ||| ||||||||  | |||||||||||||||||||||||||||    
T  21832516 aggcggagtgtt-atgtgcaagtgtgagttatatgtcccacat 21832475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 15773127 - 15773220
Alignment:
Q  197 agcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||||||   ||||||||||||| || ||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  15773127 agcttccgctcttgggggagcacgataaagtgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcccacatcg 15773220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 15773017 - 15773106
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaac 95  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| ||| |||| |||||||| ||||  |||||||||||||||    
T  15773017 ctcccctcatgacccaacagtggtatcagagccctgattcgacgaagggtacgatcgaggccgccggtcagttatgcagaaagcagcaac 15773106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 4823578 - 4823685
Alignment:
Q  183 acatgcaaagtaaga-gcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcc 281  Q
    ||||||||||||| | |||||||||  ||||| |||||| | || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||     
T  4823578 acatgcaaagtaaaaagcttccgctctagggg-agcacgttaaagtgatggactcacacttgaaggggagtgttggtttgcaagtgtgagttataagtct 4823676  T
Q  282 cacatcgga 290  Q
    |||||||||    
T  4823677 cacatcgga 4823685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 22304358 - 22304476
Alignment:
Q  7 tcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagc-agcaacgatggtaca 104  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| | |||||||||||||| ||||||    |||||    
T  22304358 tcccctcactgacccaacagtggtatcagagccccggttcgacgaagggtacgaccgaggcagccgg-tcgttgcgcagaaagcaagcaacagctgtaca 22304456  T
Q  105 agcagcaagtggctccttgt 124  Q
    || || ||||||||||||||    
T  22304457 agtagtaagtggctccttgt 22304476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 8328259 - 8328368
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcac 238  Q
    |||||||||||| || ||||| |||||||||| |||||| || ||| |||| |||||||||||||||||| |||||||  ||||| ||||||||||||||    
T  8328259 caagcagtgtcgatcagtttgcggagaaaccaacaacggtgatacaagcaa-gtaagagcttccgcttgaagggggagatcgatgcattgatggactcac 8328357  T
Q  239 acttgaggggg 249  Q
    |||||||||||    
T  8328358 acttgaggggg 8328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 290
Target Start/End: Original strand, 9240079 - 9240179
Alignment:
Q  190 aagtaagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||||| |||||||||||||| |||||  | |||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||    
T  9240079 aagtaagagtttccgcttgaggggagagcataacgaatggatggactcacacttgaggaggagtgttg-tgtgcaagtgtgagttatatgttccacatcg 9240177  T
Q  289 ga 290  Q
    ||    
T  9240178 ga 9240179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 3135364 - 3135201
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagag-cttccgcttgagggggagcacgatgaat 226  Q
    |||||||| || ||| ||||||||||| ||||| ||||||||||||||||  || |||  |||   ||| | |||||||| |||||||||||||||||||    
T  3135364 gcaacggcggtacaaacagtgtcggtctgtttgcggagaaaccagcaacgacgatacaaacaagtaaagtggcttccgctagagggggagcacgatgaat 3135265  T
Q  227 tgatggactcacacttgagggggagtgttggtt-tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||| ||||||||||||| || ||||||| ||| || |   ||||||||||||||||||||||||    
T  3135264 tgat-gactcacacttgatggtgagtgtttgttgtgtacaagtgagttatatgtcccacatcgga 3135201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 290
Target Start/End: Complemental strand, 42342296 - 42342218
Alignment:
Q  214 gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||| |||||||||||||||||||||||||||||||||||||  || ||||||||||| | |||||| ||||||||||    
T  42342296 gagcatgatgaattgatggactcacacttgagggggagtgttgttgtgtgcaagtgtgattcatatgttccacatcgga 42342218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 8328154 - 8328222
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga 209  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||| || ||||||||||||||||||||    
T  8328154 caagcagtgtcggtccgtttgcggagaaaccagcaacggcgatacaagc-aagtaagagcttccgcttga 8328222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 53577656 - 53577721
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgc 80  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||| ||||||    
T  53577656 tgacccaacagtggtatcagagtcccggttcgaagaagggtacgaccgaggccgccggtcagttgc 53577721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 11661858 - 11661977
Alignment:
Q  170 cagcaacggagacacatgcaaagtaaga-gcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagt 266  Q
    ||||||||| || ||||||||||||| | |||||||||  ||| |||||||||| || ||||||||||||||||  ||||||||||||  || || ||||    
T  11661858 cagcaacggcgatacatgcaaagtaaaaagcttccgctctaggaggagcacgataaagtgatggactcacacttttgggggagtgttgttgtatgtaagt 11661957  T
Q  267 gtgagttatatgtcccacat 286  Q
    |||||||| ||| |||||||    
T  11661958 gtgagttaaatgccccacat 11661977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 41360116 - 41360014
Alignment:
Q  21 aacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagc--agcaagtggct 118  Q
    ||||||||||||||||| |||||||||||||| || ||||||  |  ||||||  |||| ||||||||||||||||| |||||||||  |||||||||||    
T  41360116 aacagtggtatcagagcgccggttcgacgaagagtacgaccggca--gccggtc-gttgtgcagaaagcagcaacgacggtacaagcagagcaagtggct 41360020  T
Q  119 ccttgt 124  Q
    ||||||    
T  41360019 ccttgt 41360014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 9239975 - 9240075
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||||||| |||||||| |||||||| || |||||| || |||||| ||| |||| | | | ||  |||||||||||||||||||||||| ||||    
T  9239975 gctcccctcatgatccaacagtagtatcagaacctcggttcaacaaagggtacgatcgaggcagtcagtccgttgcgcagaaagcagcaacgatgataca 9240074  T
Q  105 a 105  Q
    |    
T  9240075 a 9240075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 50612618 - 50612580
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50612618 tgttggtttgcaagtgtgagttatatgtcccacatcgga 50612580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 22304143 - 22304079
Alignment:
Q  225 attgatggactcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatc 287  Q
    ||||||||||||||||||||||| || ||||| | ||  ||||||||||||||||||||||||||    
T  22304143 attgatggactcacacttgagggagaatgttgttgtgtacaagtgtgagttatatgtcccacatc 22304079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 290
Target Start/End: Complemental strand, 29644792 - 29644709
Alignment:
Q  210 gggggagcacgatgaattgatggactcacacttgaggggga---gtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||| || ||||| | |||||||||||||||    || || || |||||||||||||||||||||||||||||||    
T  29644792 gggggagcacgataaagtgatgaagtcacacttgaggggggaatgtttttgtgtgcaagtgtgagttatatgtcccacatcgga 29644709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 37990969 - 37990881
Alignment:
Q  8 cccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacg 96  Q
    ||||||||||||||||||||||||||| |||||  |||||| |||||| ||| |||| | ||||||| | ||||||||||| ||||||||    
T  37990969 cccctcatgacccaacagtggtatcagggcccc-attcgacaaagggtacgatcgaggcagccggttcgtttgcgcagaaaccagcaacg 37990881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 4823507 - 4823563
Alignment:
Q  69 ccggttagttgcgcagaaagca-gcaacgatggtacaagcagcaagtggctccttgt 124  Q
    ||||| |||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  4823507 ccggtcagttgcgcagaaagcaagcaacggtggtacaagcaacaagtggctccttgt 4823563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 54018184 - 54018104
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaa 94  Q
    ||||| |||||||| |||||||| ||||||| ||||||||||||| |||| | ||||||  | ||||||||||||||||||    
T  54018184 tgaccaaacagtggcatcagagctccggttcaacgaagggtgcgatcgaggcagccggtccgtttgcgcagaaagcagcaa 54018104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 3135098 - 3135040
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||||||||||| |||||||||||||| || ||||||| |||||| ||||||||    
T  3135098 gctcccctcatgacccaatagtggtatcagagcacc-gttcgacaaagggtacgaccgag 3135040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 33803234 - 33803143
Alignment:
Q  19 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||| | ||| ||  | ||||||| |||||||||||||  ||||||||||    
T  33803234 ccaacagtggtatcagagcctcgattcgacgaagggtacgactgaggcagccagtccgtttgcgcataaagcagcaacgacagtacaagcag 33803143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 12747977 - 12747880
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgaggggg-agtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||| || |||||||| ||||| |||||||| | |||||||| |||||| ||  | ||||| | |||||||||||||||||||||||||||||||    
T  12747977 aagagctttcgtttgaggggtgagcatgatgaatttacggactcacgcttgagaggatattgttg-tgtgcaagtgtgagttatatgtcccacatcgga 12747880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 37726496 - 37726534
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37726496 tgttggtttgcaagtgtgagttatatgtctcacatcgga 37726534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 39389062 - 39389100
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  39389062 tgttggtttgcaagtgtgagttatatgtcctacatcgga 39389100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 41360008 - 41359904
Alignment:
Q  174 aacggagacacatgcaaagtaa-gagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtg 269  Q
    ||||| || ||| ||||||||| |||||||| ||||| ||| ||||| ||||||| |||| |||||||||| |||||||||||||  || ||||||||||    
T  41360008 aacggcgatacaggcaaagtaaagagcttccacttgaagggagagcatgatgaatagatg-actcacacttaagggggagtgttgttgtgtgcaagtgtg 41359910  T
Q  270 agttat 275  Q
    ||||||    
T  41359909 agttat 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 52634889 - 52634931
Alignment:
Q  214 gagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    ||||||||||||||||| |||||||||||||||| ||||||||    
T  52634889 gagcacgatgaattgattgactcacacttgagggagagtgttg 52634931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 29644898 - 29644811
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccg---gttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagc 89  Q
    ||||||||| ||||||| |  |||||||| |||||||   |||||||||||||| |||||||| |||||| | | |||||||||||||    
T  29644898 gctcccctcgtgacccagctttggtatcaaagccccgtcggttcgacgaagggtacgaccgaggccgccgttcaattgcgcagaaagc 29644811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 2299930 - 2300000
Alignment:
Q  215 agcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccac 284  Q
    |||| ||| |||||||||||||||||||||||||||   ||||| | |||||||||| ||||||||||||||    
T  2299930 agcatgataaattgatggactcacacttgagggggatattgttg-tgtgcaagtgtgggttatatgtcccac 2300000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 51886553 - 51886589
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||||||||||||||||||||||||| |||||||    
T  51886553 tgttggtttgcaagtgtgagttatatgtctcacatcg 51886589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 1634473 - 1634443
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  1634473 tgcaagtgtgagttatatgtcccacatcgga 1634443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 8327904 - 8327934
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  8327904 tgcaagtgtgagttatatgtcccacatcgga 8327934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 25739583 - 25739553
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  25739583 tgcaagtgtgagttatatgtcccacatcgga 25739553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 39336387 - 39336357
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  39336387 tgcaagtgtgagttatatgtcccacatcgga 39336357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 3384435 - 3384398
Alignment:
Q  249 gagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  3384435 gagtgttggtgtgcaagcgtgagttatatgtcccacat 3384398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 11661537 - 11661565
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  11661537 caagtgtgagttatatgtcccacatcgga 11661565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 32463057 - 32463029
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  32463057 caagtgtgagttatatgtcccacatcgga 32463029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 33803161 - 33803094
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaag 196  Q
    |||||| |||| ||||||||||||||||| ||| |||||| |||||||||| || ||| |||| |||||    
T  33803161 gcaacgacagtacaagcagtgtcggtccg-ttgcggagaagccagcaacggcgatacaagcaaggtaag 33803094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 35946524 - 35946552
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  35946524 caagtgtgagttatatgtcccacatcgga 35946552  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 45901715 - 45901743
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  45901715 caagtgtgagttatatgtcccacatcgga 45901743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 52634678 - 52634706
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  52634678 caagtgtgagttatatgtcccacatcgga 52634706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 131 - 287
Target Start/End: Original strand, 39404273 - 39404425
Alignment:
Q  131 acggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgat 230  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||| || |||     |||||||||||||||||||||| |||||||||||||||||    
T  39404273 acggcagtgcaagcagtgtcggtccgtttgcggagaaaccatcaacggcgataca-----agtaagagcttccgcttgagggagagcacgatgaattgat 39404367  T
Q  231 ggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    ||||| |||||||||| |||||||||  || | ||||||||||||||||||||||||||    
T  39404368 ggact-acacttgaggaggagtgttgttgtgtacaagtgtgagttatatgtcccacatc 39404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 146 - 287
Target Start/End: Original strand, 2740956 - 2741098
Alignment:
Q  146 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga--gggggagcacgatgaattgatggactcacacttg 243  Q
    |||||||||||||||  |||||||||||||||| || ||  |||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  2740956 gtgtcggtccgtttgcagagaaaccagcaacggcgatacgagcaaagtaagagcttccgcttgaaggggagagcatgatgaattgatggactcacacttg 2741055  T
Q  244 agggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    | ||||||||||  | ||||||||||||||||||||||||||||    
T  2741056 aaggggagtgtt-atgtgcaagtgtgagttatatgtcccacatc 2741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 286
Target Start/End: Original strand, 44621160 - 44621452
Alignment:
Q  4 cgctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttg-cgcagaaagcagcaacgatggta 102  Q
    |||||| ||||||| ||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||  |||  |||||||||||||||||  | ||    
T  44621160 cgctcctctcatgatccaacagtggtatcagagccctggtttgacgaagggtacgaccgagacagccggtccgttttcgcagaaagcagcaacggcgata 44621259  T
Q  103 caagcagcaagtggctccttgtacg---------gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagt 193  Q
    |||| ||   || | ||| | | ||         ||||||||  | |||| ||||||||||| ||||  |||| ||||||||||  || |||  |||       
T  44621260 caagtagt--gtcggtccgttttcgcagaaagcagcaacggcgatacaagtagtgtcggtccatttgcagagacaccagcaacgacgatacaaacaagta 44621357  T
Q  194 aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtcccacat 286  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||||| ||||    
T  44621358 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgagggggagtgtcgttgtgtgcaagtgtgagttatatgtccaacat 44621452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 290
Target Start/End: Original strand, 54108796 - 54108943
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcac 238  Q
    |||| ||||||||| |||||||||||||||||||||||| || ||| |||| |||||||||||||||||| ||||||||| |||||||| || |||||||    
T  54108796 caagtagtgtcggttcgtttgtggagaaaccagcaacggcgatacaagcaa-gtaagagcttccgcttgaagggggagcatgatgaattaatagactcac 54108894  T
Q  239 acttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||| |||||||||||| || ||||||||| |||  ||||||||||||||||    
T  54108895 acttaagggggagtgtt-gtgtgcaagtgtcagt--tatgtcccacatcgga 54108943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 20826086 - 20826247
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaat 226  Q
    |||||||| || |||||||||| | |||||||| ||||||||||||||||| || ||| |||| |||| ||| ||||||||| ||||||||| |||||||    
T  20826086 gcaacggcggtacaagcagtgttgatccgtttgcggagaaaccagcaacggcgatacaagcaa-gtaatagcgtccgcttgaagggggagcatgatgaat 20826184  T
Q  227 tgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
     ||||||||||||||||||||||||||||  | |  || |||||||||||||||||||||||||    
T  20826185 agatggactcacacttgagggggagtgtt-atgtagaaatgtgagttatatgtcccacatcgga 20826247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 45496723 - 45496805
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacga 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  45496723 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggccgccggtcagttgcgtagaaagcagcaacga 45496805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 3340979 - 3341083
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||| ||| ||||||||||||||||||||||| ||||||| || |||||    
T  3340979 tgacccaacagtggtatcagagccccggttcgacgaacggtacgaccgaggtcgctggtcagttgcgcagaaagcagcaacgacggtacaaacaacaagt 3341078  T
Q  115 ggctc 119  Q
    |||||    
T  3341079 ggctc 3341083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 10246092 - 10246212
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||||||||||| ||||||||||| ||||||| |||| ||| ||||| || ||||| ||||||||||||||||| |||||||||| |||||    
T  10246092 tgacccaacagtggtatcagaaccccggttcgatgaagggtacgactgaggccgcctgtcagttgtgcagaaagcagcaacgacggtacaagcaacaagt 10246191  T
Q  115 ggctccttgtacggcaacggc 135  Q
    |||| ||||| | ||||||||    
T  10246192 ggcttcttgtgcagcaacggc 10246212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 44620592 - 44620690
Alignment:
Q  194 aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgt--tggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||  | || |||||||||||||||||||||||||||||||    
T  44620592 aagagcttccgcttttgggggagcacgatgaattgatggactcacacttgaggtggagtgtcgttgtgtgcaagtgtgagttatatgtcccacatcgga 44620690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 128 - 256
Target Start/End: Complemental strand, 16889444 - 16889315
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaat- 226  Q
    |||||||| || |||| |||||| ||||||||| ||||||||||||||||  || |||  |||   ||||||||||||||||||||||||||||| ||      
T  16889444 gcaacggcggtacaagtagtgtccgtccgtttgaggagaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgattaaag 16889345  T
Q  227 tgatggactcacacttgagggggagtgttg 256  Q
    ||||||||||||||||||||||||||||||    
T  16889344 tgatggactcacacttgagggggagtgttg 16889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 193 - 289
Target Start/End: Complemental strand, 18932983 - 18932887
Alignment:
Q  193 taagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgg 289  Q
    |||||| |||||||||| ||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18932983 taagagtttccgcttgaagggggagcatgatgaatagatagactcacacttgaggggg-gtgttggtttgcaagtctgagttatatgtcccacatcgg 18932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 290
Target Start/End: Original strand, 36629172 - 36629267
Alignment:
Q  195 agagcttccgcttgaggg-ggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||| || |||||| ||||||||||||| |||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  36629172 agagcttccgcttgaaggtggagcatgatgaattgatgggctcacacttgagggggagtgtt-gtgttcaagtgtgagttatatgtcccacatcgga 36629267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 49076722 - 49076574
Alignment:
Q  146 gtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatg--aattgatggactcacactt 242  Q
    ||||||||||||||||||||||||||||||||   | ||| || ||||||||| ||||||||| ||||||| || ||||  || ||||||||||||||||    
T  49076722 gtgtcggtccgtttgtggagaaaccagcaacgacaatacaagc-aagtaagagtttccgcttgaagggggaacatgatgaaaagtgatggactcacactt 49076624  T
Q  243 gagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||| |||||||||  || |||||||||||||||||||| ||| ||||||    
T  49076623 gaggaggagtgttgttgtgtgcaagtgtgagttatatgtaccatatcgga 49076574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 41370529 - 41370637
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||| ||||||||||||  |||||||||||||||||||||| | ||||| | ||||| |||||||| ||||||  ||||||||||||||||    
T  41370529 tgacccaacagtgatatcagagcccccattcgacgaagggtgcgaccgaggcagccgg-tcgttgcacagaaagccgcaacggcggtacaagcagcaagt 41370627  T
Q  115 ggctccttgt 124  Q
     |||||||||    
T  41370628 agctccttgt 41370637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 45489622 - 45489457
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatg-aat 226  Q
    |||||||| || |||| |||||||||||||||| |||||| |||||||  | || ||| || |||||||||||||||||||| | |||||| |||| ||     
T  45489622 gcaacggcggtacaagaagtgtcggtccgtttgcggagaacccagcaatagcgatacaagc-aagtaagagcttccgcttgaagaggagcatgatgaaaa 45489524  T
Q  227 tgatggactcacacttga-gggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
     ||||||||||||||||| ||||||||||||  || | ||||||||| ||||||||| |||||||||    
T  45489523 cgatggactcacacttgaggggggagtgttgttgtgtacaagtgtgaattatatgtctcacatcgga 45489457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 18933102 - 18933008
Alignment:
Q  29 tatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagtggctccttgt 124  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| | |||| ||||||||  ||||||  ||||||||||||||||||||||||||    
T  18933102 tatcagagccccggttcgacgaagtgtgcgaccgaggcagccgg-tggttgtgcagaaagtcgcaacggcggtacaagcagcaagtggctccttgt 18933008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 22028263 - 22028163
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgatggactcac 238  Q
    |||| |||||||||||||||| ||||||||||||||||  ||  || || |||||||||||| |||||| |||||||||||||||||  |||||||||||    
T  22028263 caagtagtgtcggtccgtttgcggagaaaccagcaacgacgattcaagc-aagtaagagctttcgcttgaagggggagcacgatgaaaagatggactcac 22028165  T
Q  239 ac 240  Q
    ||    
T  22028164 ac 22028163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 20826008 - 20826104
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt-tagttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    |||| |||||||||| |||||||||||  ||||||||||||| |||||||| | ||||||  | ||||||||||||||||||||  |||||||||||    
T  20826008 atgatccaacagtggcatcagagccccaattcgacgaagggtacgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaagcag 20826104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 3244657 - 3244577
Alignment:
Q  209 agggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||| || ||||||| ||||||||||| ||| |||| |||||||| | ||||||||||||||||||||| |||||||||    
T  3244657 agggggaacatgatgaatagatggactcacgcttaagggagagtgttg-tgtgcaagtgtgagttatatgtctcacatcgga 3244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 3341083 - 3341154
Alignment:
Q  217 cacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||| || ||||||||||||||||||||  ||||||||  || |||||||||||||||||||||||||||    
T  3341083 cacgataaagtgatggactcacacttgaggcagagtgttgttgtgtgcaagtgtgagttatatgtcccacat 3341154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 23817674 - 23817572
Alignment:
Q  5 gctcccctc-atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagtt-gcgcagaaagcagcaacgatggta 102  Q
    ||||||||| |||| ||||||||||||||| ||||||  ||||||||||||| ||| |||| | ||||||  ||| ||||||||||||||||||| ||||    
T  23817674 gctcccctcgatgatccaacagtggtatcatagcccca-ttcgacgaagggtacgatcgaggcagccggtctgtttgcgcagaaagcagcaacgacggta 23817576  T
Q  103 caag 106  Q
    ||||    
T  23817575 caag 23817572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 52884856 - 52884917
Alignment:
Q  230 tggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||||||    
T  52884856 tggactcacacttgagggg-agtgttgttgtgtgcaagtgtgagttatatgtcccacatcgga 52884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 19895457 - 19895506
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaaggg 54  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  19895457 gctccccccatgacccaacagtggtatcagagcttcggttcgacgaaggg 19895506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 2740868 - 2740943
Alignment:
Q  20 caacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaac 95  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| | |||| |  | |||||||||||||||||||    
T  2740868 caacagtggtatcagagcccc-gttcgacgaagggtacgaccgaggcagccgatccgtttgcgcagaaagcagcaac 2740943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 41707392 - 41707340
Alignment:
Q  190 aagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacact 241  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  41707392 aagtaagagcttccccttgaagggggagcatgatgaattgatggactcacact 41707340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 41370673 - 41370731
Alignment:
Q  231 ggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||| ||||| ||||||    
T  41370673 ggactcacacttgagggg-agtgttggtttgaaagagtgagttatatatcccatatcgga 41370731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 49076822 - 49076768
Alignment:
Q  9 ccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||    
T  49076822 ccctcatgacccaacagtggtatcagagcccc-gttcgacaaagggtactaccgag 49076768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 22028362 - 22028301
Alignment:
Q  5 gctcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagac 66  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||||||||  |||||||||    
T  22028362 gctcccctcactgacccaacagtggtatcggagcccc-gttcgacgaagggtatgaccgagac 22028301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 41370349 - 41370387
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  41370349 tgttggtttgcaagtgtgagttatatgtcccaaatcgga 41370387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 286
Target Start/End: Original strand, 49880152 - 49880186
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||||||||||||||||||||    
T  49880152 tgttggtttgcaagtgtgagttatatgtcccacat 49880186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 50788147 - 50788109
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  50788147 tgttggtttgcaagtgtaagttatatgtcccacatcgga 50788109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 55933288 - 55933250
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  55933288 tgttggtttgcaagtgtgagttatatgtcctacatcgga 55933250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 214
Target Start/End: Original strand, 43174405 - 43174477
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggggg 214  Q
    |||||||||||||| ||||| |||||||||| |||||| || |||  | |||||||||||||||||||| ||||    
T  43174405 aagcagtgtcggtctgtttgcggagaaaccaacaacggcgatacaaac-aagtaagagcttccgcttgaagggg 43174477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 22028150 - 22028087
Alignment:
Q  229 atggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||| ||| || ||||||  || ||||||||||| |||||||||||||||||||    
T  22028150 atggactcacacttaaggaggggtgttgttgtgtgcaagtgtgacttatatgtcccacatcgga 22028087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 50630921 - 50630881
Alignment:
Q  250 agtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  50630921 agtgttggtttgcaagcgtgagttatatgtcctacatcgga 50630881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 6876091 - 6876060
Alignment:
Q  9 ccctcatgacccaacagtggtatcagagcccc 40  Q
    ||||||||||||||||||||||||||||||||    
T  6876091 ccctcatgacccaacagtggtatcagagcccc 6876060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 252 - 283
Target Start/End: Complemental strand, 18933134 - 18933103
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtccca 283  Q
    ||||||||||||||||||||||||||||||||    
T  18933134 tgttggtttgcaagtgtgagttatatgtccca 18933103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 31691316 - 31691404
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaa 94  Q
    |||||||  |||||||||||||||||| |||||||  ||| |||||||||| |||||||| |||| |||  | ||||||||||| ||||||    
T  31691316 gctcccccaatgacccaacagtggtattagagccc--gtttgacgaagggtacgaccgaggccgctggtccgtttgcgcagaaaacagcaa 31691404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 44620821 - 44620879
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||| |||| ||||||||||||||||| ||||| | |||||| ||||||||    
T  44620821 gctcccctcatgatccaatagtggtatcagagcccc-gttcgtcaaagggtacgaccgag 44620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 2740700 - 2740730
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  2740700 tgcaagtgtgagttatatgtcccacatcgga 2740730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 247
Target Start/End: Original strand, 5882092 - 5882122
Alignment:
Q  217 cacgatgaattgatggactcacacttgaggg 247  Q
    |||||||||||||||||||||||||||||||    
T  5882092 cacgatgaattgatggactcacacttgaggg 5882122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 52884695 - 52884725
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  52884695 tgcaagtgtgagttatatgtcccacatcgga 52884725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Complemental strand, 16888971 - 16888942
Alignment:
Q  261 gcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcgga 16888942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 290
Target Start/End: Original strand, 50002423 - 50002456
Alignment:
Q  257 gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||| |||||||||    
T  50002423 gtttgcaagtgtgagttatatgtctcacatcgga 50002456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 27426803 - 27426771
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagc 37  Q
    ||||||||||||| |||||||||||||||||||    
T  27426803 gctcccctcatgatccaacagtggtatcagagc 27426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 34646803 - 34646775
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  34646803 caagtgtgagttatatgtcccacatcgga 34646775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 41707618 - 41707590
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  41707618 caagtgtgagttatatgtcccacatcgga 41707590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 3537372 - 3537275
Alignment:
Q  194 aagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3537372 aagagcttccgcttgaagggggagcaagatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 3537275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 44290690 - 44290586
Alignment:
Q  187 gcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 285  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290690 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 44290591  T
Q  286 tcgga 290  Q
    |||||    
T  44290590 tcgga 44290586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 50051883 - 50051779
Alignment:
Q  187 gcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 285  Q
    |||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50051883 gcaaagtaagagcttctgcttgaagggggagcatgatgaattaatggactcacacttgagggggaatgttggtttgcaagtgtgagttatatgtcccaca 50051784  T
Q  286 tcgga 290  Q
    |||||    
T  50051783 tcgga 50051779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 183 - 290
Target Start/End: Complemental strand, 48588724 - 48588616
Alignment:
Q  183 acatgcaaagtaagagcttccgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcc 281  Q
    ||||||||| ||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48588724 acatgcaaaataagagcttccgcttgaaggggtagcatgatgaatagatggactcacacttgagggggagtgttggtttgcaagtgtgagttctatgtcc 48588625  T
Q  282 cacatcgga 290  Q
     ||||||||    
T  48588624 gacatcgga 48588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 34364679 - 34364955
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagtt-gcgcagaaagcagcaacgatggtacaagcagcaag 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||  ||| | ||||||||||||||||  | |||||| ||   |    
T  34364679 tgacccaacagtggtatcagagccccggttcgacgaagggtacgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaagtagt--g 34364776  T
Q  114 tggctccttgtacgg-caacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggg 212  Q
    | | ||| |  ||   ||||||   | ||||||   ||| |||||||| ||| ||||||||||| | |||||| |||| ||||||||||||| |||||||    
T  34364777 tcggtccgttaaccaacaacggtgatacaagcaca-tcgatccgtttgcggaaaaaccagcaacagcgacacaagcaa-gtaagagcttccgattgaggg 34364874  T
Q  213 ggagcacgatgaatt-gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||| ||||||   |||||||||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||    
T  34364875 ggagcatgatgaaaaagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatcgga 34364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 141 - 290
Target Start/End: Original strand, 37555990 - 37556141
Alignment:
Q  141 aagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgatggactcaca 239  Q
    |||||||||||||||||||| ||||||||||||||||| || | | || ||||||||||||  ||||| |||||| ||| ||| || |||||||||||||    
T  37555990 aagcagtgtcggtccgtttgcggagaaaccagcaacggcgatagaagc-aagtaagagctttagcttgaagggggggcaggataaagtgatggactcaca 37556088  T
Q  240 cttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||  || | |||||||||||||||||||||||||||||    
T  37556089 cttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgga 37556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 48588857 - 48588739
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||| | |||||| | ||| ||||||||| ||||||| ||||||    
T  48588857 gctcccctcatgatccaacaatgatatcagagccccggttcgacgaagggtgcgactgaggcagccggtca-ttgtgcagaaagctgcaacgacggtaca 48588759  T
Q  105 agcagcaagtggctccttgt 124  Q
    ||||||||||||||||||||    
T  48588758 agcagcaagtggctccttgt 48588739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 50052020 - 50051902
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||| | |||| ||||||||| |||||||  |||||    
T  50052020 gctcccctcgtgacccaacagtggtatcagagccccggttcgacaaagggcgcgaccgaggcagccgg-tggttgggcagaaagccgcaacgacagtaca 50051922  T
Q  105 agcagcaagtggctccttgt 124  Q
    ||||||||||||||||||||    
T  50051921 agcagcaagtggctccttgt 50051902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 26661894 - 26661766
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||| |||||||| |||||||| ||| || || ||||||||||||| |||||||| ||||| || | ||||||||||||||||||||| ||||||    
T  26661894 gctcccctcgtgacccaaaagtggtattagaacctcgattcgacgaagggtacgaccgaggccgccagtcaattgcgcagaaagcagcaacgacggtaca 26661795  T
Q  105 agcagcaagtggctccttgtacggcaacg 133  Q
    |||| ||||||||||||||| | ||||||    
T  26661794 agcaacaagtggctccttgtgcagcaacg 26661766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 44290809 - 44290720
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaa 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| |||||| ||||||||    
T  44290809 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgaggcagccggtt-gttgcgcagaaagccgcaacggtggtacaa 44290720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 22077719 - 22077623
Alignment:
Q  193 taagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  22077719 taagagcttccgcttgatggggagcatgatgaatacatggactcacacttgagggggagtgtt-gtgtgcaagtgtgagttatatgtctcacatcgga 22077623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 170 - 289
Target Start/End: Complemental strand, 26661773 - 26661651
Alignment:
Q  170 cagcaacggagacacatgcaaagtaagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagt 266  Q
    ||||||||  || ||||||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||| |||||||||||||  || | |||||    
T  26661773 cagcaacgacgatacatgcaaagtaagagcttccgcttgaagggagagtatgatgaatagatggactcacacttaagggggagtgttgttgtgtacaagt 26661674  T
Q  267 gtgagttatatgtcccacatcgg 289  Q
    |||||||||||||||||||||||    
T  26661673 gtgagttatatgtcccacatcgg 26661651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 22077393 - 22077250
Alignment:
Q  144 cagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttg 243  Q
    ||||||||||| ||| | ||||||||| ||| ||| || ||| |||| |||||||||| |||||||  | ||||| ||||||| ||||||| ||||||||    
T  22077393 cagtgtcggtctgtt-gcggagaaaccggcagcggcgatacaagcaa-gtaagagctttcgcttgatagcgagcatgatgaatagatggacacacacttg 22077296  T
Q  244 agggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  22077295 agggggagtgtt-gtgtgcaagtgtgagttatatgtcccacatcgga 22077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 11977128 - 11977224
Alignment:
Q  24 agtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagtggctcct 121  Q
    ||||| |||||||||| |||| |||||||||| |||||||| ||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  11977128 agtggcatcagagccc-ggtttgacgaagggtacgaccgaggccgtcggtcagttgcgcagaaagcagcaacgacggtacaagcagcaagtggctcct 11977224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 158 - 290
Target Start/End: Complemental strand, 66349 - 66216
Alignment:
Q  158 ttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    |||||||||| |||||||||| || ||| ||||  ||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||| ||||||     
T  66349 ttgtggagaagccagcaacggcgatacaagcaagataagagcttccgcttgatgggggaacatgatgaatagatggactcacacttgaggggaagtgtt- 66251  T
Q  257 gtttgcaagtgtgagttat-atgtcccacatcgga 290  Q
    || ||||||||||||| || ||||| |||||||||    
T  66250 gtgtgcaagtgtgagtaatcatgtctcacatcgga 66216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 47380012 - 47379913
Alignment:
Q  190 aagtaagagcttccgcttgaggggg-agcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||   |||||||||||||||||| ||||||||||    
T  47380012 aagtaagaacttccgcttgaggggggagcacgatgaattgttggacttacatttgagggggagtgttg--atgcaagtgtgagttatatatcccacatcg 47379915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 41184298 - 41184198
Alignment:
Q  145 agtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttga 244  Q
    |||||||||||||||| ||| ||||||||||||  || |||  |||   |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41184298 agtgtcggtccgtttgcggaaaaaccagcaacgacgatacaaacaagtaaagagcttccgcttgagggggagcacgatgaagtgatggactcacacttga 41184199  T
Q  245 g 245  Q
    |    
T  41184198 g 41184198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 41157254 - 41157402
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagta-agagcttccgcttgagggggagcacgatgaattgatggactcac 238  Q
    |||| |||||| ||||||||| |||||||||| |||||  || |||  ||| ||| ||||||||||||   ||||||||||||| |||||||||||||||    
T  41157254 caagtagtgtcagtccgtttgcggagaaaccaacaacgacgatacaaacaa-gtagagagcttccgctct-gggggagcacgataaattgatggactcac 41157351  T
Q  239 acttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||| ||||||||| |||  || ||||||||||||||||||||||||||||    
T  41157352 acttaagggggagtattgttgtgtgcaagtgtgagttatatgtcccacatc 41157402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 48588481 - 48588364
Alignment:
Q  7 tcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaa 105  Q
    |||||||| ||| |||| ||||||||||||| |||||||| ||||||||||| |||||| | ||||||| |||||||||||||| ||||||| | |||||    
T  48588481 tcccctcactgaaccaaaagtggtatcagagtcccggttcaacgaagggtgcaaccgaggcagccggtt-gttgcgcagaaagccgcaacgacgatacaa 48588383  T
Q  106 gcagcaagtggctccttgt 124  Q
     || |||||||||||||||    
T  48588382 acaacaagtggctccttgt 48588364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 30630866 - 30630766
Alignment:
Q  190 aagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||  | ||||||||||| ||||||||| |||||||    
T  30630866 aagtaagtgcttcctcttgaagggggagcatgatgaattgatggactcacacttgagagggagtgtt-atgtgcaagtgtgatttatatgtctcacatcg 30630768  T
Q  289 ga 290  Q
    ||    
T  30630767 ga 30630766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 66468 - 66377
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacg 96  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| | ||||||  |||||| ||||| || |||||    
T  66468 gctcccctcatgacccaacagtgatatcagagtcccggttcgacgaagggtacgaccgaggcagccggtccgttgcggagaaaccaacaacg 66377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 24448212 - 24448296
Alignment:
Q  194 aagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgt 279  Q
    |||||||| ||||||||||  |||||||||||||||||| |||||| ||||||||||||||| || ||||||||| ||||||||||    
T  24448212 aagagctttcgcttgagggaaagcacgatgaattgatgggctcacaattgagggggagtgtt-gtgtgcaagtgtaagttatatgt 24448296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 22077491 - 22077392
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||||||| ||||| || | ||||||  |||||| ||||| ||||||||| ||||||    
T  22077491 gctccccttgtgacccaacagtggcatcagagcccaggttcgacgaagggtacgaccaaggcagccggtccgttgcggagaaaccagcaacgacggtaca 22077392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 34649611 - 34649705
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||| | ||||||  | |||||||||||||| |||||| |||||||||||    
T  34649611 tgacccaacagtggtatcagagcccc-gttcgatgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcaacaacgacggtacaagcag 34649705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 31767153 - 31767099
Alignment:
Q  9 ccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  31767153 ccctcatgacccaacagtggtatcagagcccc-gttcgacgaagggtacgaccgag 31767099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 9956071 - 9956129
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 63  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  9956071 gctctcctcgtgacccaacagtggtatcagagcctcggttcgacgaagggtacgaccga 9956129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 44290993 - 44290953
Alignment:
Q  250 agtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44290993 agtgttggtttgcaagtgtgagttatatgtcccacatcgga 44290953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 287
Target Start/End: Complemental strand, 50469306 - 50469212
Alignment:
Q  191 agtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||| |||||||| |||| | ||||||| |||  ||| ||||| |||||||||||||| | |||||||||||||||||||||| |||||    
T  50469306 agtaagagcttctgcttgaggaggagtatgatgaatagataaactgacact-gagggggagtgttg-tgtgcaagtgtgagttatatgtcctacatc 50469212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 3537562 - 3537495
Alignment:
Q  180 gacacatgcaaagtaa-gagcttccgcttga-gggggagcacgatgaattgatggactcacacttgag 245  Q
    ||||||||||| |||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  3537562 gacacatgcaaggtaaagagcttccgcttgaagggggagcatgatgatttgatggactcacacttgag 3537495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 11977251 - 11977309
Alignment:
Q  233 actcacacttgagggggagtgttggtttg--caagtgtgagttatatgtcccacatcgg 289  Q
    |||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||    
T  11977251 actcacacttgagggggagtgttgctgtgtacaagtgtgagttatatgtcccacatcgg 11977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 22077825 - 22077722
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||  |||||||||||||| |||||||||| |||||||||||||||  |||| || | ||||||  |||||| ||||| ||| ||||| | ||||    
T  22077825 gctccccttgtgacccaacagtggcatcagagcccaggttcgacgaagggtatgaccaaggcagccggtccgttgcggagaaaccagtaacgacgataca 22077726  T
Q  105 agca 108  Q
    ||||    
T  22077725 agca 22077722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 1188457 - 1188392
Alignment:
Q  190 aagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    |||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||  ||||||||    
T  1188457 aagtaagagcttccacttgaaggg-agcatgatgaattgatggactcacacttgaggatgagtgttg 1188392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 37850597 - 37850547
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggt 55  Q
    ||||||||||||| |||||  ||||||||||||||||||||||| ||||||    
T  37850597 gctcccctcatgatccaactctggtatcagagccccggttcgacaaagggt 37850547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 41759475 - 41759513
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  41759475 tgttggtttgcaagtgtgagttatatgtcacacatcgga 41759513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 3537496 - 3537456
Alignment:
Q  24 agtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  3537496 agtggtatcagagccacggttcgacgaagggtacgaccgag 3537456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 45494146 - 45494106
Alignment:
Q  251 gtgttggtttgcaagtgtgag-ttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  45494146 gtgttggtttgcaagtgtgagtttatatgtcccacatcgga 45494106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 252 - 287
Target Start/End: Original strand, 3550712 - 3550747
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||| |||||||||||||||||||||||||||    
T  3550712 tgttggttggcaagtgtgagttatatgtcccacatc 3550747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 47380323 - 47380258
Alignment:
Q  214 gagcacgatgaattgatggactcacacttgagggg--gagtgttggtttgcaagtgtgagttatatg 278  Q
    ||||| |||||||||||||| ||||||||||||||  || |||| || |||||||||||||||||||    
T  47380323 gagcatgatgaattgatggattcacacttgaggggaagattgtt-gtgtgcaagtgtgagttatatg 47380258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 30207967 - 30207997
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagag 36  Q
    |||||||||||||||||||||||||||||||    
T  30207967 ctcccctcatgacccaacagtggtatcagag 30207997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 30630620 - 30630586
Alignment:
Q  18 cccaacagtggtatcagagccccggttcgacgaag 52  Q
    ||||||||||||||||||| |||||||||||||||    
T  30630620 cccaacagtggtatcagagtcccggttcgacgaag 30630586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 32168853 - 32168823
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtccc 282  Q
    |||||||||||||||||||||||||||||||    
T  32168853 tgttggtttgcaagtgtgagttatatgtccc 32168823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 41142372 - 41142402
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  41142372 tgcaagtgtgagttatatgtcccacatcgga 41142402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 50052189 - 50052151
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  50052189 tgttggtttttaagtgtgagttatatgtcccacatcgga 50052151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Complemental strand, 32594880 - 32594847
Alignment:
Q  254 ttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||||||||||||||||| |||||    
T  32594880 ttggtttgcaagtgtgagttatatgtcctacatc 32594847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 209
Target Start/End: Original strand, 34649699 - 34649767
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga 209  Q
    |||||||| ||||||| |||| ||||||||||||||||  || ||| || |||||||||||| |||||||    
T  34649699 caagcagtttcggtccatttgcggagaaaccagcaacgacgatacaagc-aagtaagagctttcgcttga 34649767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 44043944 - 44043908
Alignment:
Q  251 gtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||| |||||||||||||||||||    
T  44043944 gtgttggtttgcaagtgt-agttatatgtcccacatcg 44043908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 17294579 - 17294607
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  17294579 caagtgtgagttatatgtcccacatcgga 17294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Original strand, 34649440 - 34649468
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  34649440 caagtgtgagttatatgtcccacatcgga 34649468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Complemental strand, 37850758 - 37850730
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||    
T  37850758 tgcaagtgtgagttatatgtcccacatcg 37850730  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 41157166 - 41157257
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaag 106  Q
    |||||||||| ||||||||||||||| ||||||| |||||| ||||| || | | ||||  | ||||||| |||||| |||||| ||||||||    
T  41157166 tgacccaacaatggtatcagagcccc-gttcgacaaagggtacgaccaaggcagtcggtccgtttgcgcataaagcaacaacgacggtacaag 41157257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 41184403 - 41184343
Alignment:
Q  5 gctcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    |||||||||| ||| |||||||||||||||||||||  | ||||||||||||  |||||||    
T  41184403 gctcccctcactgatccaacagtggtatcagagcccgagctcgacgaagggtaagaccgag 41184343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 6e-37; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 140 - 286
Target Start/End: Original strand, 624077 - 624222
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcaca 239  Q
    |||| |||||||||||||||| |||||| |||||||||| || |||     ||||||||||||||||| | |||||||| ||||||| |||||| |||||    
T  624077 caagtagtgtcggtccgtttgcggagaacccagcaacggcgatacaaagcgagtaagagcttccgcttaaaggggagcatgatgaatagatgga-tcaca 624175  T
Q  240 cttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  624176 cttgaggggaagtgttggtttgcaagtgtgagttatatgtcccacat 624222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 128 - 290
Target Start/End: Complemental strand, 13416051 - 13415888
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaat 226  Q
    |||||||| ||||||||||| |||||||||||| |||||||||| |||| | || ||| || ||||||||||||||||||| |||||||||| | |||||    
T  13416051 gcaacggcggtgcaagcagtctcggtccgtttgcggagaaaccatcaacagcgatacaagc-aagtaagagcttccgcttgaagggggagcatgctgaat 13415953  T
Q  227 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
     ||||||||||||||||| |||||||| ||  || |||||||||||||||||||||||||||||||    
T  13415952 agatggactcacacttga-ggggagtgctgttgtgtgcaagtgtgagttatatgtcccacatcgga 13415888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 6500749 - 6500852
Alignment:
Q  187 gcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccaca 285  Q
    ||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  6500749 gcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgatggggagtgttggtttgcaagtgtgagttatatgt-ccaca 6500847  T
Q  286 tcgga 290  Q
    |||||    
T  6500848 tcgga 6500852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 3295287 - 3295143
Alignment:
Q  148 gtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgagggggagcacgatgaattgatggactcacacttgaggg 247  Q
    ||||||||||||| | ||||| ||||||||| || ||| |||| |||||||||||||||| |||||||||||||  || |||||||||||||||||||||    
T  3295287 gtcggtccgtttgcgcagaaagcagcaacggcgatacaagcaa-gtaagagcttccgcttaagggggagcacgaaaaagtgatggactcacacttgaggg 3295189  T
Q  248 ggagtgttg----gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||    || |||||||||||| ||||||||||||||||||    
T  3295188 ggagtgttgttgtgtgtgcaagtgtgag-tatatgtcccacatcgga 3295143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 287
Target Start/End: Complemental strand, 24489424 - 24489335
Alignment:
Q  197 agcttccgcttgagggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||| | |||||||| |||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  24489424 agcttctggttgaggggtagcatgatgaattgatggactcacacttgagggggagtgtt-gtgttcaagtgtgagttatatgtcccacatc 24489335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 36522120 - 36522027
Alignment:
Q  194 aagagcttccgcttgagg-gggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||    
T  36522120 aagagcttccgcttgaggtgggataacgatgaattgatggactcacacttgagggagagtgtt-gtgcgcaagtgtgagttatatgtcccacatc 36522027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 290
Target Start/End: Complemental strand, 26074993 - 26074910
Alignment:
Q  209 agggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||    
T  26074993 agggggagcttgatgaattgatggactcacacttgagggggagtgttgttgtgtacaagtgtgagttatatgtcccacatcgga 26074910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 31509555 - 31509653
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggag--tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||  |||| || ||||||||||||||||||||| |||||||||    
T  31509555 aagagcttccgcttgaggggtgagcatgatgaattgatggactcacacttgagggagagattgtt-gtgtgcaagtgtgagttatatgtctcacatcgga 31509653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 6500612 - 6500729
Alignment:
Q  5 gctcccctca-tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtac 103  Q
    |||||||||| | ||||||||||||||||||||  ||||||||||||||||||| |||||| | ||| | | |||||||||||||| ||||||  ||||     
T  6500612 gctcccctcacttacccaacagtggtatcagagttccggttcgacgaagggtgcaaccgaggcagccag-tcgttgcgcagaaagccgcaacggcggtat 6500710  T
Q  104 aagcagcaagtggctcctt 122  Q
    |||||||||||||||||||    
T  6500711 aagcagcaagtggctcctt 6500729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 9498651 - 9498534
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtaca 104  Q
    ||||||||| ||||||||  | ||||||||||||||| |||||| |||||| |||||||| | ||||||  |||||||||||||| ||||||  | ||||    
T  9498651 gctcccctcgtgacccaagtgcggtatcagagccccg-ttcgacaaagggtacgaccgaggcagccggtc-gttgcgcagaaagctgcaacggcgctaca 9498554  T
Q  105 agcagcaagtggctccttgt 124  Q
    ||||||||||||||||||||    
T  9498553 agcagcaagtggctccttgt 9498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 290
Target Start/End: Complemental strand, 13785837 - 13785737
Alignment:
Q  190 aagtaagagcttccgcttgagggggag-cacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||| |||||  || ||||||| ||| |||||||| ||||||||||||||| || || ||||||||||||||||||||| ||||    
T  13785837 aagtaagagcttccgcttgaaggggaaacatgatgaatagatagactcacatttgagggggagtgtt-gtgtggaagtgtgagttatatgtcccaaatcg 13785739  T
Q  289 ga 290  Q
    ||    
T  13785738 ga 13785737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 9498493 - 9498411
Alignment:
Q  174 aacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgtt 255  Q
    ||||| || ||| ||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  9498493 aacggtgatacaggcaaagtaagagcttccccttgaagggggagcatgatgaatagatggactcacacttgagggggtgtgtt 9498411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 26074477 - 26074642
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttgaggggg-agcacgatgaat 226  Q
    |||||||| ||||||||| |||||||| ||||| | |||| ||| ||| ||  | |||    |||||||||||||| ||||| || | |||| ||| |||    
T  26074477 gcaacggcggtgcaagcaatgtcggtctgtttgcgaagaacccaacaatggcaatacaaagcaagtaagagcttccacttgaaggagtagcatgatcaat 26074576  T
Q  227 tgatggactcacacttgagggggagtg--ttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||  || || | |||||||||||||||||| ||| ||||||    
T  26074577 tgatggactcacacttgagggggagtgtttttgtgtacaagtgtgagttatatgttccatatcgga 26074642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 36522459 - 36522369
Alignment:
Q  197 agcttccgcttgagggg--gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||  || ||||||||||||||||| | ||| ||||||||||||||| || || |||||||||||||||||| |||||    
T  36522459 agcttccgcttgaggggaggaacacgatgaattgatggatttacaattgagggggagtgtt-gtatgaaagtgtgagttatatgtctcacat 36522369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 32487563 - 32487661
Alignment:
Q  13 catgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaa 112  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||| ||| | ||| | | |||| ||||||||| ||||||  ||||||||||||||    
T  32487563 catgacccaactctggtatcagagccccgattcgacgaagggtgcgactgaggcagcc-gatcgttgtgcagaaagccgcaacggcggtacaagcagcaa 32487661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 38427391 - 38427486
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt-tagttgcgcagaaagcagcaacgatggtacaagca 108  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||| |||| ||| || |  ||||||||||| ||||||||| | ||||||||    
T  38427391 atgatccaacagtggtattagagccccggttcgacgaagggtgtgaccaagacagccagtctgtttgcgcagaaaccagcaacgacgatacaagca 38427486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 26074330 - 26074274
Alignment:
Q  233 actcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||    
T  26074330 actcacacttgagggggagtgttg-tgtgcaagtgtgagttatatgtcacacatcgga 26074274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 35150607 - 35150719
Alignment:
Q  140 caagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagt--aagagcttccgc-ttgagggggagcacgatgaattgatggactc 236  Q
    ||||||||||||||||||||| |||||| |||||||||| || |||    ||||  || ||||||||| ||| ||| ||||| |||||||||||||||||    
T  35150607 caagcagtgtcggtccgtttgcggagaacccagcaacggtgatacaaagcaagtaaaaaagcttccgctttgggggtgagcatgatgaattgatggactc 35150706  T
Q  237 acacttgaggggg 249  Q
    ||||||| |||||    
T  35150707 acacttggggggg 35150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 5723957 - 5723919
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5723957 tgttggtttgcaagtgtgagttatatgtcccacatcgga 5723919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 26075140 - 26075063
Alignment:
Q  19 ccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagtt-gcgcagaaagcagcaacg 96  Q
    |||||||||||||||||||| || ||||||||||||| |||||||| | ||||||  ||| ||||||||||||||||||    
T  26075140 ccaacagtggtatcagagcctcg-ttcgacgaagggtacgaccgaggcagccggtctgtttgcgcagaaagcagcaacg 26075063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 32487386 - 32487424
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32487386 tgttggtttgcaagtgtgagttatatgtcccacatcgga 32487424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 256
Target Start/End: Original strand, 38427461 - 38427553
Alignment:
Q  164 agaaaccagcaacggagacacatgcaaagtaagagcttccgcttgag-ggggagcacgatgaattgatggactcacacttgagggggagtgttg 256  Q
    ||||||||||||||  || ||| |||| |||||||||||| |||||  |||| |||  |||||| |||||||||||||||||||||||||||||    
T  38427461 agaaaccagcaacgacgatacaagcaa-gtaagagcttcctcttgaaaggggtgcatcatgaatagatggactcacacttgagggggagtgttg 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 13416136 - 13416033
Alignment:
Q  6 ctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtaca 104  Q
    |||||||  |||||||||||||||||||||| ||| ||||| |||||||| |||||||| |  |||||  | ||||||||||||||||||||  ||| ||    
T  13416136 ctcccctagtgacccaacagtggtatcagagtccc-gttcgtcgaagggtacgaccgaggcaaccggtccgtttgcgcagaaagcagcaacggcggtgca 13416038  T
Q  105 agcag 109  Q
    |||||    
T  13416037 agcag 13416033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 299652 - 299706
Alignment:
Q  5 gctcccctcatgaccc-aacagtggtatcagagccccggttcgacgaagggtgcga 59  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  299652 gctcccctcatgaccccaacagtggtatcagagcctc-gttcgacgaagggtgcga 299706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 623810 - 623848
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  623810 tgttggtttgcaagtgtgagttatatgtctcacatcgga 623848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 26074400 - 26074482
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggt-tagttgcgcagaaagcagcaacg 96  Q
    |||||||||| ||| ||||||||||||||| ||| |||||| |||||||||| ||  || |  ||||||||||||||||||||    
T  26074400 tgacccaacaatggcatcagagccccggtttgacaaagggtacgaccgagacagctagtctgtttgcgcagaaagcagcaacg 26074482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 286
Target Start/End: Complemental strand, 27502202 - 27502168
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacat 286  Q
    |||||||||||||||||||||||||||||||||||    
T  27502202 tgttggtttgcaagtgtgagttatatgtcccacat 27502168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 290
Target Start/End: Complemental strand, 36492378 - 36492345
Alignment:
Q  257 gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||||||||    
T  36492378 gtttgcaagtgtgagttatatgtcccacatcgga 36492345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 623989 - 624080
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaag 106  Q
    |||||||||||||||||||||| ||| |||||| ||||||| |||||| | | | ||||  | |||||||||||| |||||||| ||||||||    
T  623989 tgacccaacagtggtatcagag-ccctgttcgaagaagggtacgaccgtggcagtcggtccgtttgcgcagaaagaagcaacgacggtacaag 624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 15370380 - 15370426
Alignment:
Q  228 gatggactcacacttgagggggagtgttg--gtttgcaagtgtgagt 272  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  15370380 gatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagt 15370426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 3622882 - 3622828
Alignment:
Q  9 ccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccga 63  Q
    |||||||||||||||| |||||||||||    ||||||||||||||| |||||||    
T  3622882 ccctcatgacccaacaatggtatcagagttgaggttcgacgaagggttcgaccga 3622828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Original strand, 6500443 - 6500480
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  6500443 tgttggtttgcaagtgtgagttatatgt-ccacatcgga 6500480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 12662810 - 12662780
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  12662810 tgcaagtgtgagttatatgtcccacatcgga 12662780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 24489566 - 24489516
Alignment:
Q  14 atgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgag 64  Q
    ||||| |||||||||||||||| ||||| | ||||||||||| ||||||||    
T  24489566 atgactcaacagtggtatcagaaccccgatccgacgaagggtacgaccgag 24489516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 25328097 - 25328147
Alignment:
Q  5 gctcccctca-tgacccaacagtggtatcagagccccggttcgacgaaggg 54  Q
    |||||||||| |||||||||||||||| |||||||||  ||||||||||||    
T  25328097 gctcccctcagtgacccaacagtggtaccagagccccccttcgacgaaggg 25328147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Original strand, 35150007 - 35150037
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  35150007 tgcaagtgtgagttatatgtcccacatcgga 35150037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 35150515 - 35150613
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagac----cgccggt-tagttgcgcagaaagcagcaacgatggtacaagcag 109  Q
    |||||||||||||||||||||||||| ||| ||||||||||  ||||||| |     |||||| |  ||||||||||||||||||||| || ||||||||    
T  35150515 tgacccaacagtggtatcagagcccc-gtttgacgaagggtatgaccgaggcaggtagccggtctgtttgcgcagaaagcagcaacgacggaacaagcag 35150613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 36568725 - 36568695
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  36568725 tgcaagtgtgagttatatgtcccacatcgga 36568695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 290
Target Start/End: Complemental strand, 40296473 - 40296443
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcgga 40296443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 290
Target Start/End: Original strand, 299490 - 299519
Alignment:
Q  261 gcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||||||||||||||||    
T  299490 gcaagtgtgagttatatgtcccacatcgga 299519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 41170627 - 41170664
Alignment:
Q  253 gttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||| || |||||||||||||||||||||||||    
T  41170627 gttggtttgtaattgtgagttatatgtcccacatcgga 41170664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 290
Target Start/End: Complemental strand, 1028673 - 1028645
Alignment:
Q  262 caagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||||||||||||    
T  1028673 caagtgtgagttatatgtcccacatcgga 1028645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 5660290 - 5660326
Alignment:
Q  252 tgttggtttgcaagtgtgagttatatgtcccacatcg 288  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  5660290 tgttggtttgcaaatgtgagttatatgttccacatcg 5660326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 287
Target Start/End: Complemental strand, 9498821 - 9498785
Alignment:
Q  251 gtgttggtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  9498821 gtgttggtttgcaaatgtgagttatatgtctcacatc 9498785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 15370099 - 15370127
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||    
T  15370099 tgcaagtgtgagttatatgtcccacatcg 15370127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 31865950 - 31865902
Alignment:
Q  203 cgcttgagggggagcacgatgaattgatggactcacacttgagggggag 251  Q
    ||||||||| ||||||| || |||||||||||||||| |||||| ||||    
T  31865950 cgcttgaggaggagcacaataaattgatggactcacatttgaggaggag 31865902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 35150167 - 35150223
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgacc 61  Q
    ||||||| |||||||||||  ||||||||||| | | |||||||||||||| |||||    
T  35150167 gctccccccatgacccaactctggtatcagagtcgcagttcgacgaagggtacgacc 35150223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 35150747 - 35150775
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||    
T  35150747 tgcaagtgtgagttatatgtcccacatcg 35150775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 35151038 - 35151066
Alignment:
Q  260 tgcaagtgtgagttatatgtcccacatcg 288  Q
    |||||||||||||||||||||||||||||    
T  35151038 tgcaagtgtgagttatatgtcccacatcg 35151066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 71; Significance: 3e-32; HSPs: 5)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 286
Target Start/End: Complemental strand, 1398 - 1238
Alignment:
Q  128 gcaacggcagtgcaagcagtgtcggtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaat 226  Q
    |||||||| || |||| |||||||||||||||| ||||||||||||||||  || ||| || ||||||||||||||||| | |||||||||| ||| ||     
T  1398 gcaacggcggtacaagtagtgtcggtccgtttgcggagaaaccagcaacgacgatacaagc-aagtaagagcttccgctcgaagggggagcatgatcaaa 1300  T
Q  227 tgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacat 286  Q
     ||||||||||||||||||||||| |||||  || | |||||||||||||||||||||||||    
T  1299 agatggactcacacttgagggggaatgttgttgtgtacaagtgtgagttatatgtcccacat 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 290
Target Start/End: Complemental strand, 3254 - 3113
Alignment:
Q  152 gtccgtttgtggagaaaccagcaacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgaggggga 250  Q
    ||||||||| |||||| ||| |||||| || |||    |||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  3254 gtccgtttgcggagaacccaacaacggcgatacaaatcaagtaagagcttccgcttgaagggggagcatgatgagttgatggactcacacttgaggggga 3155  T
Q  251 gtgttg--gtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||  || |||| ||||||||||||||||||||||||||    
T  3154 gtgttgttgtgtgcaggtgtgagttatatgtcccacatcgga 3113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 1575 - 1464
Alignment:
Q  145 agtgtcggtccgtttgtggagaaaccagcaacg--gagacacatgcaaagtaagagcttccgcttg-agggggagcacgatgaattgatggactcacact 241  Q
    ||||| |||||||||| ||||||||||||||||  | || ||| || |||||| ||||| |||| | |||||||||| ||||||| ||| ||||||||||    
T  1575 agtgtaggtccgtttgcggagaaaccagcaacgttgtgatacaagc-aagtaaaagctttcgctggaagggggagcatgatgaatcgattgactcacact 1477  T
Q  242 tgagggggagtgt 254  Q
    |||||||||||||    
T  1476 tgagggggagtgt 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 1465 - 1383
Alignment:
Q  25 gtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagcaacgatggtacaag 106  Q
    |||||||||||||||||||||||||||||||  ||||||| | ||||||  | ||| ||||||||||||||||  ||||||||    
T  1465 gtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaag 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 1679 - 1591
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttag-ttgcgcagaaagcagca 93  Q
    ||||||||| |||||||||||||||||||||||| | ||||||| |||||| | |||||| | || |||  | |||||||||||||||||    
T  1679 gctcccctcgtgacccaacagtggtatcagagcctc-gttcgacaaagggtacaaccgaggcagctggtccgtttgcgcagaaagcagca 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 5268 - 5387
Alignment:
Q  174 aacggagacacatgcaaagtaagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtga 270  Q
    ||||| || ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| |||  || |||||||||||    
T  5268 aacggcgatacaggcaaagtaagagcttccgcttgaagggggagcacgatgaactgatggactcacacttgagggagagttttgttgtgtgcaagtgtga 5367  T
Q  271 gttatatgtcccacatcgga 290  Q
    ||||||||| ||||||||||    
T  5368 gttatatgttccacatcgga 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 5155 - 5262
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    |||||||||||||| |||| ||||||| ||||||||| ||| ||| |||| | || |||  |||||||||||||||||||||  ||||||||||||||||    
T  5155 tgacccaacagtggcatcacagccccg-ttcgacgaaaggtacgatcgaggcagctggtc-gttgcgcagaaagcagcaacggcggtacaagcagcaagt 5252  T
Q  115 ggctccttgt 124  Q
    ||||||||||    
T  5253 ggctccttgt 5262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 193 - 290
Target Start/End: Complemental strand, 367 - 270
Alignment:
Q  193 taagagcttccgcttga-gggggagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  367 taagagcttccgcttgaagggggagcatgatgaataaatggactcacatttg-gggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 500 - 392
Alignment:
Q  15 tgacccaacagtggtatcagagccccggttcgacgaagggtgcgaccgagaccgccggttagttgcgcagaaagcagcaacgatggtacaagcagcaagt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||   | ||| | |||||| ||||||  |||||    |||||||||||||||    
T  500 tgacccaacagtggtatcagagccccggttcgacgaagggtgcaaccgaggtagtcgg-tcgttgcgaagaaagtcgcaacagcagtacaagcagcaagt 402  T
Q  115 ggctccttgt 124  Q
    ||||||||||    
T  401 ggctccttgt 392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 39771 - 39868
Alignment:
Q  194 aagagcttccgcttgagggg-gagcacgatgaattgatggactcacacttgagggggagtgttggtttgcaagtgtgagttatatgtcccacatcgga 290  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |  | || | |||||||||||||||||||||||||||||    
T  39771 aagagcttccgcttgaggggtgagcatgatgaattgatgaactcacacttgagggggaattgttgtgttcaagtgtgagttatatgtcccacatcgga 39868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 39616 - 39672
Alignment:
Q  5 gctcccctcatgacccaacagtggtatcagagccccggttcgacgaagggtgcgacc 61  Q
    ||||||||  ||||||||||||||||||||||||  ||||||||||||||| |||||    
T  39616 gctcccctagtgacccaacagtggtatcagagccgaggttcgacgaagggttcgacc 39672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 287
Target Start/End: Complemental strand, 17663 - 17587
Alignment:
Q  213 ggagcacgatgaattgatggactcacacttgagggggagtgttg--gtttgcaagtgtgagttatatgtcccacatc 287  Q
    |||||| ||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||| ||||||    
T  17663 ggagcatgatgaatagatggactcacacttgagggggagtgttgttgtgtgcaagtgtgagttatatgtcacacatc 17587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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