View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13925_low_9 (Length: 470)

Name: NF13925_low_9
Description: NF13925
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13925_low_9
NF13925_low_9
[»] chr6 (86 HSPs)
chr6 (130-334)||(14737085-14737289)
chr6 (173-334)||(5266492-5266653)
chr6 (130-291)||(22010251-22010412)
chr6 (1-131)||(14737356-14737486)
chr6 (134-291)||(14741988-14742145)
chr6 (1-130)||(22010477-22010606)
chr6 (1-133)||(11857150-11857282)
chr6 (137-334)||(11857351-11857567)
chr6 (1-125)||(14742222-14742346)
chr6 (130-327)||(28155097-28155294)
chr6 (186-291)||(30125080-30125185)
chr6 (130-258)||(16839107-16839235)
chr6 (5-121)||(5674516-5674633)
chr6 (130-258)||(6005783-6005911)
chr6 (130-258)||(33330028-33330156)
chr6 (130-258)||(33335525-33335653)
chr6 (130-244)||(6438860-6438974)
chr6 (130-245)||(5343841-5343956)
chr6 (277-334)||(14741926-14741983)
chr6 (173-334)||(16652716-16652877)
chr6 (277-334)||(22010189-22010246)
chr6 (277-334)||(30125018-30125075)
chr6 (189-291)||(2171939-2172041)
chr6 (173-270)||(5674313-5674410)
chr6 (173-245)||(6136367-6136439)
chr6 (1-75)||(28184680-28184757)
chr6 (173-291)||(16578921-16579039)
chr6 (173-291)||(16616341-16616459)
chr6 (277-334)||(6439026-6439083)
chr6 (277-334)||(16579044-16579101)
chr6 (277-334)||(16616279-16616336)
chr6 (189-258)||(22709480-22709549)
chr6 (186-291)||(27647530-27647635)
chr6 (1-102)||(28155379-28155480)
chr6 (275-327)||(5016976-5017028)
chr6 (283-334)||(5674229-5674281)
chr6 (186-246)||(6026941-6027001)
chr6 (275-327)||(31085953-31086005)
chr6 (280-326)||(22709590-22709636)
chr6 (173-246)||(33342507-33342581)
chr6 (277-334)||(6136490-6136547)
chr6 (277-334)||(16554454-16554511)
chr6 (277-334)||(16631010-16631067)
chr6 (277-334)||(25420797-25420854)
chr6 (277-337)||(5344007-5344067)
chr6 (278-322)||(27647480-27647524)
chr6 (189-270)||(411769-411851)
chr6 (173-246)||(13150956-13151030)
chr6 (173-291)||(16554516-16554634)
chr6 (173-291)||(16631072-16631190)
chr6 (280-322)||(26253602-26253644)
chr6 (277-335)||(33342631-33342689)
chr6 (173-246)||(34164551-34164625)
chr6 (173-246)||(34166773-34166847)
chr6 (275-327)||(24714936-24714989)
chr6 (173-246)||(25420904-25420977)
chr6 (277-322)||(34166678-34166723)
chr6 (278-334)||(6026834-6026890)
chr6 (6-102)||(6438680-6438776)
chr6 (275-327)||(18234648-18234700)
chr6 (280-322)||(411698-411740)
chr6 (288-326)||(2172057-2172095)
chr6 (189-291)||(3073178-3073280)
chr6 (280-322)||(3073288-3073330)
chr6 (277-327)||(16839273-16839323)
chr6 (277-327)||(33329940-33329990)
chr6 (277-322)||(13150861-13150906)
chr6 (7-95)||(22709241-22709327)
chr6 (277-322)||(23896899-23896944)
chr6 (287-327)||(33335437-33335477)
chr6 (278-322)||(34151840-34151884)
chr6 (278-322)||(34164456-34164500)
chr6 (275-306)||(603770-603801)
chr6 (5-67)||(5017304-5017364)
chr6 (275-322)||(5571761-5571808)
chr6 (282-329)||(21272467-21272514)
chr6 (5-95)||(31936804-31936892)
chr6 (277-327)||(6005949-6005999)
chr6 (280-322)||(6097931-6097973)
chr6 (1-56)||(16838920-16838977)
chr6 (1-56)||(33330297-33330354)
chr6 (1-56)||(33335794-33335851)
chr6 (189-246)||(5757059-5757116)
chr6 (6-56)||(6005598-6005650)
chr6 (189-246)||(23896792-23896849)
chr6 (275-327)||(10076672-10076724)
[»] scaffold0665 (1 HSPs)
scaffold0665 (154-334)||(8093-8273)
[»] chr8 (68 HSPs)
chr8 (137-334)||(10688618-10688815)
chr8 (130-334)||(25327664-25327887)
chr8 (1-123)||(7289713-7289835)
chr8 (130-335)||(10683738-10683962)
chr8 (137-291)||(6311719-6311873)
chr8 (137-335)||(18852626-18852844)
chr8 (5-122)||(6311532-6311649)
chr8 (137-291)||(18870083-18870238)
chr8 (130-291)||(7289489-7289651)
chr8 (173-334)||(30656102-30656282)
chr8 (173-337)||(36979834-36980017)
chr8 (5-121)||(30655880-30655996)
chr8 (173-291)||(33037349-33037467)
chr8 (173-291)||(4759596-4759714)
chr8 (5-121)||(18852913-18853030)
chr8 (5-121)||(18870307-18870424)
chr8 (173-334)||(25689561-25689721)
chr8 (5-123)||(10688884-10689003)
chr8 (1-102)||(25327961-25328062)
chr8 (1-102)||(25328087-25328188)
chr8 (5-121)||(33037554-33037671)
chr8 (130-258)||(39784420-39784548)
chr8 (130-245)||(35745755-35745870)
chr8 (5-121)||(4759820-4759938)
chr8 (5-121)||(1261703-1261820)
chr8 (5-120)||(36979611-36979726)
chr8 (173-291)||(1261477-1261595)
chr8 (277-334)||(4759534-4759591)
chr8 (277-334)||(18870021-18870078)
chr8 (277-334)||(33037287-33037344)
chr8 (277-335)||(39784324-39784382)
chr8 (275-327)||(5701959-5702011)
chr8 (173-291)||(3439150-3439267)
chr8 (278-334)||(3439088-3439144)
chr8 (275-326)||(4456573-4456624)
chr8 (289-336)||(6311890-6311937)
chr8 (290-337)||(7289424-7289471)
chr8 (280-326)||(2627327-2627373)
chr8 (189-291)||(2627381-2627483)
chr8 (277-338)||(7412894-7412956)
chr8 (280-322)||(26288462-26288504)
chr8 (280-322)||(26301719-26301761)
chr8 (280-322)||(26313713-26313755)
chr8 (277-334)||(15290143-15290200)
chr8 (277-334)||(15470512-15470569)
chr8 (5-109)||(26288121-26288226)
chr8 (189-270)||(26288352-26288433)
chr8 (5-109)||(26301378-26301483)
chr8 (189-270)||(26301609-26301690)
chr8 (5-109)||(26313372-26313477)
chr8 (189-270)||(26313603-26313684)
chr8 (277-334)||(42575852-42575909)
chr8 (5-65)||(31071035-31071095)
chr8 (6-102)||(39784632-39784728)
chr8 (168-246)||(42575723-42575802)
chr8 (173-246)||(15290250-15290324)
chr8 (173-246)||(15470619-15470693)
chr8 (280-322)||(31042921-31042963)
chr8 (275-327)||(23799099-23799151)
chr8 (5-67)||(7412569-7412629)
chr8 (277-327)||(35745921-35745971)
chr8 (277-326)||(19175233-19175282)
chr8 (5-67)||(4696416-4696476)
chr8 (209-246)||(7289629-7289666)
chr8 (189-270)||(7412787-7412868)
chr8 (6-56)||(10684116-10684168)
chr8 (6-56)||(35745572-35745624)
chr8 (8-67)||(23799384-23799441)
[»] chr5 (104 HSPs)
chr5 (137-334)||(43592656-43592854)
chr5 (173-334)||(31180669-31180830)
chr5 (1-133)||(43592455-43592587)
chr5 (1-133)||(43598900-43599032)
chr5 (1-133)||(43604392-43604524)
chr5 (1-133)||(43609884-43610016)
chr5 (1-128)||(27445146-27445273)
chr5 (1-128)||(27449990-27450117)
chr5 (1-130)||(15044861-15044992)
chr5 (1-120)||(1456952-1457071)
chr5 (137-291)||(27445350-27445504)
chr5 (137-334)||(27450193-27450409)
chr5 (130-291)||(1456700-1456861)
chr5 (175-339)||(29402545-29402728)
chr5 (130-334)||(15045057-15045279)
chr5 (137-334)||(43599101-43599318)
chr5 (137-334)||(43604593-43604810)
chr5 (137-334)||(43610085-43610302)
chr5 (5-109)||(31180447-31180551)
chr5 (5-99)||(30631640-30631734)
chr5 (173-336)||(30631768-30631950)
chr5 (130-258)||(33768548-33768676)
chr5 (130-258)||(33791680-33791808)
chr5 (130-258)||(2785739-2785867)
chr5 (5-120)||(24136080-24136196)
chr5 (130-258)||(28807171-28807299)
chr5 (130-246)||(37561054-37561170)
chr5 (131-258)||(31396585-31396712)
chr5 (131-258)||(31401442-31401569)
chr5 (5-123)||(35387893-35388012)
chr5 (173-291)||(24136303-24136421)
chr5 (277-334)||(1456638-1456695)
chr5 (277-334)||(27445509-27445566)
chr5 (130-246)||(37556232-37556348)
chr5 (189-291)||(18442068-18442170)
chr5 (189-291)||(26177529-26177631)
chr5 (5-109)||(38219629-38219734)
chr5 (275-327)||(14520794-14520846)
chr5 (189-291)||(9789644-9789746)
chr5 (277-335)||(10592843-10592901)
chr5 (280-326)||(16407650-16407696)
chr5 (173-291)||(22536672-22536790)
chr5 (173-246)||(25077813-25077886)
chr5 (173-246)||(25135782-25135855)
chr5 (277-326)||(37556133-37556182)
chr5 (277-326)||(37560955-37561004)
chr5 (278-334)||(22536796-22536852)
chr5 (189-291)||(29720028-29720131)
chr5 (291-334)||(43625605-43625648)
chr5 (275-329)||(12083656-12083710)
chr5 (280-326)||(15465070-15465116)
chr5 (189-291)||(16407704-16407806)
chr5 (280-326)||(16409086-16409132)
chr5 (280-326)||(26177475-26177521)
chr5 (277-322)||(25077718-25077763)
chr5 (277-322)||(25135687-25135732)
chr5 (277-334)||(40379678-40379735)
chr5 (275-326)||(11916453-11916504)
chr5 (280-334)||(24136429-24136484)
chr5 (280-323)||(36931855-36931898)
chr5 (280-322)||(9789754-9789796)
chr5 (173-291)||(10592906-10593023)
chr5 (280-322)||(18442178-18442220)
chr5 (189-291)||(26170420-26170522)
chr5 (277-327)||(28807083-28807133)
chr5 (6-56)||(28807429-28807479)
chr5 (280-322)||(29719978-29720020)
chr5 (280-322)||(29722165-29722207)
chr5 (280-322)||(29752335-29752377)
chr5 (277-334)||(16543994-16544051)
chr5 (277-334)||(16546216-16546273)
chr5 (285-322)||(35388196-35388233)
chr5 (189-270)||(38219865-38219946)
chr5 (277-334)||(40381889-40381946)
chr5 (278-326)||(9352816-9352864)
chr5 (5-95)||(24553307-24553395)
chr5 (189-291)||(29722215-29722318)
chr5 (283-322)||(29751672-29751711)
chr5 (277-327)||(2785905-2785955)
chr5 (280-326)||(26170366-26170412)
chr5 (277-327)||(31396497-31396547)
chr5 (277-327)||(33768714-33768764)
chr5 (277-327)||(33791846-33791896)
chr5 (189-270)||(9352891-9352972)
chr5 (189-248)||(16409183-16409242)
chr5 (173-224)||(29751564-29751615)
chr5 (5-95)||(36932128-36932216)
chr5 (5-66)||(11181641-11181700)
chr5 (277-327)||(31401354-31401404)
chr5 (6-56)||(2785556-2785608)
chr5 (7-67)||(7160712-7160770)
chr5 (7-67)||(14520461-14520519)
chr5 (173-242)||(16544105-16544174)
chr5 (173-242)||(16546327-16546396)
chr5 (5-65)||(28832486-28832544)
chr5 (6-56)||(31396843-31396895)
chr5 (6-56)||(31401700-31401752)
chr5 (6-56)||(33768365-33768417)
chr5 (6-56)||(33791497-33791549)
chr5 (173-242)||(40379789-40379858)
chr5 (173-242)||(40382000-40382069)
chr5 (231-291)||(29752267-29752327)
chr5 (6-102)||(37556432-37556527)
chr5 (6-102)||(37561254-37561349)
[»] chr4 (72 HSPs)
chr4 (130-335)||(9223898-9224122)
chr4 (130-291)||(9228748-9228909)
chr4 (173-339)||(29761078-29761244)
chr4 (132-291)||(18712317-18712476)
chr4 (1-127)||(51520633-51520759)
chr4 (1-126)||(9224191-9224316)
chr4 (1-126)||(9228978-9229103)
chr4 (1-109)||(18712567-18712675)
chr4 (173-334)||(51520870-51521050)
chr4 (130-334)||(56141511-56141735)
chr4 (173-337)||(24742397-24742580)
chr4 (130-291)||(5733023-5733185)
chr4 (130-334)||(3814383-3814605)
chr4 (5-121)||(24742174-24742291)
chr4 (130-297)||(45356854-45357021)
chr4 (130-258)||(45347412-45347540)
chr4 (130-258)||(18856086-18856214)
chr4 (5-95)||(29760874-29760965)
chr4 (1-102)||(3814198-3814299)
chr4 (277-334)||(9228686-9228743)
chr4 (277-334)||(18856252-18856309)
chr4 (277-334)||(18860464-18860521)
chr4 (275-329)||(16628351-16628405)
chr4 (275-329)||(38151916-38151970)
chr4 (277-334)||(5733190-5733247)
chr4 (173-246)||(7122374-7122447)
chr4 (173-246)||(7124596-7124669)
chr4 (278-329)||(3778116-3778167)
chr4 (277-336)||(8392980-8393039)
chr4 (277-327)||(5143809-5143859)
chr4 (168-246)||(8393089-8393167)
chr4 (277-327)||(8689044-8689094)
chr4 (189-291)||(13992714-13992816)
chr4 (280-326)||(13992824-13992870)
chr4 (275-329)||(16622772-16622826)
chr4 (189-291)||(31495737-31495839)
chr4 (277-327)||(45347324-45347374)
chr4 (277-334)||(8395191-8395248)
chr4 (275-328)||(10047930-10047983)
chr4 (189-270)||(28468061-28468142)
chr4 (5-121)||(28468287-28468404)
chr4 (6-102)||(5732844-5732940)
chr4 (275-327)||(6742896-6742948)
chr4 (1-69)||(45347658-45347726)
chr4 (277-327)||(5148244-5148294)
chr4 (277-327)||(5268699-5268749)
chr4 (280-326)||(28467986-28468032)
chr4 (275-327)||(54867743-54867795)
chr4 (277-335)||(7122266-7122324)
chr4 (275-328)||(9194162-9194216)
chr4 (280-322)||(31495847-31495889)
chr4 (280-326)||(31985136-31985182)
chr4 (277-334)||(5135649-5135706)
chr4 (186-246)||(5135756-5135817)
chr4 (277-334)||(5137875-5137932)
chr4 (186-246)||(5137982-5138043)
chr4 (277-322)||(7124501-7124546)
chr4 (173-246)||(8395298-8395371)
chr4 (1-102)||(45357105-45357206)
chr4 (275-323)||(36314715-36314763)
chr4 (275-323)||(36328924-36328972)
chr4 (6-56)||(18855906-18855956)
chr4 (5-64)||(5112466-5112523)
chr4 (275-323)||(5396176-5396223)
chr4 (5-92)||(16628655-16628740)
chr4 (5-67)||(3777778-3777838)
chr4 (5-67)||(5396479-5396539)
chr4 (5-67)||(16623101-16623161)
chr4 (7-67)||(5269008-5269066)
chr4 (209-246)||(56141713-56141750)
chr4 (5-64)||(6743226-6743283)
chr4 (8-67)||(25861841-25861898)
[»] chr1 (62 HSPs)
chr1 (173-334)||(24793666-24793827)
chr1 (130-336)||(41398618-41398823)
chr1 (1-130)||(41398411-41398542)
chr1 (1-130)||(41390756-41390887)
chr1 (130-334)||(41390963-41391185)
chr1 (6-121)||(24787111-24787226)
chr1 (130-258)||(1054609-1054737)
chr1 (130-258)||(39445859-39445987)
chr1 (173-270)||(24786908-24787005)
chr1 (130-258)||(44023472-44023600)
chr1 (130-258)||(25439494-25439622)
chr1 (5-122)||(24202517-24202635)
chr1 (130-258)||(25444687-25444815)
chr1 (130-258)||(43988044-43988172)
chr1 (173-291)||(20622640-20622758)
chr1 (277-334)||(39446025-39446082)
chr1 (277-334)||(44023377-44023434)
chr1 (189-291)||(19360975-19361077)
chr1 (277-334)||(1054514-1054571)
chr1 (5-121)||(19366057-19366174)
chr1 (275-327)||(13598965-13599017)
chr1 (191-291)||(19365831-19365931)
chr1 (275-326)||(21536121-21536172)
chr1 (280-326)||(24202260-24202306)
chr1 (277-327)||(25439406-25439456)
chr1 (277-327)||(25444599-25444649)
chr1 (189-291)||(51765053-51765155)
chr1 (277-334)||(9036003-9036060)
chr1 (277-334)||(44203218-44203275)
chr1 (173-246)||(44203325-44203398)
chr1 (275-327)||(37070332-37070384)
chr1 (275-334)||(13659838-13659897)
chr1 (280-335)||(21053539-21053594)
chr1 (280-326)||(19360921-19360967)
chr1 (280-326)||(51764999-51765045)
chr1 (5-121)||(19358593-19358709)
chr1 (5-121)||(19361182-19361298)
chr1 (278-322)||(13604108-13604152)
chr1 (275-326)||(3282271-3282322)
chr1 (189-248)||(9986891-9986950)
chr1 (280-322)||(9986798-9986840)
chr1 (280-322)||(19365781-19365823)
chr1 (280-322)||(20622766-20622808)
chr1 (1-102)||(25439705-25439806)
chr1 (1-102)||(25444898-25444999)
chr1 (6-102)||(1054821-1054917)
chr1 (275-327)||(16124188-16124240)
chr1 (6-102)||(39445679-39445775)
chr1 (6-102)||(44023683-44023779)
chr1 (189-291)||(40282021-40282124)
chr1 (173-291)||(9036065-9036183)
chr1 (277-327)||(26644381-26644431)
chr1 (280-322)||(40281971-40282013)
chr1 (189-248)||(21053645-21053705)
chr1 (5-95)||(13604402-13604490)
chr1 (275-314)||(29652379-29652418)
chr1 (5-67)||(47098633-47098693)
chr1 (5-67)||(47102647-47102707)
chr1 (5-66)||(3281936-3281995)
chr1 (275-328)||(10924807-10924860)
chr1 (6-56)||(43988314-43988366)
chr1 (7-66)||(37069998-37070055)
[»] chr3 (123 HSPs)
chr3 (173-334)||(8738542-8738703)
chr3 (173-334)||(9090780-9090941)
chr3 (1-120)||(22172985-22173104)
chr3 (130-291)||(28503381-28503542)
chr3 (173-334)||(7167702-7167882)
chr3 (169-291)||(28501214-28501336)
chr3 (137-291)||(22172724-22172878)
chr3 (130-291)||(18656805-18656967)
chr3 (173-291)||(40372318-40372436)
chr3 (173-291)||(27352143-27352261)
chr3 (5-121)||(8738809-8738926)
chr3 (5-124)||(40372539-40372659)
chr3 (173-291)||(2671127-2671245)
chr3 (5-120)||(7167478-7167595)
chr3 (5-120)||(2671333-2671449)
chr3 (5-123)||(8477598-8477717)
chr3 (173-291)||(8477822-8477940)
chr3 (5-102)||(28501462-28501560)
chr3 (5-102)||(28503629-28503727)
chr3 (173-334)||(6718288-6718449)
chr3 (5-121)||(9091047-9091164)
chr3 (189-326)||(32143782-32143919)
chr3 (130-258)||(2672514-2672642)
chr3 (130-258)||(8512604-8512732)
chr3 (130-258)||(8517484-8517612)
chr3 (173-334)||(45282585-45282746)
chr3 (130-258)||(2676670-2676798)
chr3 (130-258)||(24968481-24968609)
chr3 (130-245)||(32475848-32475963)
chr3 (130-245)||(32480706-32480821)
chr3 (277-334)||(22172662-22172719)
chr3 (277-334)||(40372256-40372313)
chr3 (189-291)||(1306439-1306541)
chr3 (277-334)||(28501152-28501209)
chr3 (277-334)||(28503319-28503376)
chr3 (189-321)||(27985971-27986103)
chr3 (275-329)||(30709264-30709318)
chr3 (277-334)||(18656972-18657029)
chr3 (277-329)||(36029659-36029711)
chr3 (168-288)||(54634775-54634895)
chr3 (276-327)||(21711767-21711818)
chr3 (231-326)||(27974442-27974537)
chr3 (173-291)||(6716147-6716265)
chr3 (280-326)||(23198475-23198521)
chr3 (280-326)||(23200674-23200720)
chr3 (280-326)||(26928089-26928135)
chr3 (5-121)||(1306179-1306296)
chr3 (277-334)||(3617034-3617091)
chr3 (276-329)||(16264895-16264948)
chr3 (277-334)||(54634710-54634767)
chr3 (6-102)||(18656614-18656710)
chr3 (275-327)||(39032025-39032077)
chr3 (275-334)||(16498637-16498696)
chr3 (275-322)||(27027271-27027318)
chr3 (275-322)||(40734087-40734134)
chr3 (189-291)||(800748-800850)
chr3 (173-246)||(4598926-4599000)
chr3 (173-246)||(4601147-4601221)
chr3 (275-329)||(35926055-35926108)
chr3 (280-326)||(37726244-37726290)
chr3 (277-326)||(2672427-2672476)
chr3 (277-326)||(2676583-2676632)
chr3 (277-334)||(4599050-4599107)
chr3 (277-334)||(4601271-4601328)
chr3 (277-334)||(6716085-6716142)
chr3 (290-335)||(8477958-8478003)
chr3 (277-338)||(10055801-10055862)
chr3 (173-246)||(25637120-25637193)
chr3 (275-328)||(48438780-48438833)
chr3 (278-334)||(25637013-25637069)
chr3 (275-327)||(27038606-27038658)
chr3 (278-326)||(37408045-37408093)
chr3 (275-327)||(40592252-40592304)
chr3 (283-326)||(1306552-1306595)
chr3 (284-327)||(1730916-1730959)
chr3 (280-326)||(7782657-7782703)
chr3 (173-246)||(10055912-10055986)
chr3 (173-246)||(10058134-10058208)
chr3 (173-246)||(10060356-10060430)
chr3 (173-246)||(10062578-10062652)
chr3 (173-246)||(10064800-10064874)
chr3 (173-246)||(10067022-10067096)
chr3 (173-246)||(10208885-10208959)
chr3 (173-246)||(10211085-10211159)
chr3 (275-328)||(24694654-24694708)
chr3 (280-326)||(33386146-33386192)
chr3 (277-322)||(10058039-10058084)
chr3 (277-322)||(10060261-10060306)
chr3 (277-322)||(10062483-10062528)
chr3 (277-322)||(10064705-10064750)
chr3 (277-322)||(10066927-10066972)
chr3 (277-334)||(10208778-10208835)
chr3 (277-334)||(10210978-10211035)
chr3 (189-270)||(26928164-26928245)
chr3 (5-95)||(27986225-27986313)
chr3 (275-322)||(40735018-40735065)
chr3 (280-322)||(800698-800740)
chr3 (189-291)||(23198365-23198467)
chr3 (280-326)||(27453526-27453572)
chr3 (277-327)||(32476014-32476064)
chr3 (277-327)||(32480872-32480922)
chr3 (189-291)||(33386200-33386302)
chr3 (283-328)||(47923326-47923371)
chr3 (186-246)||(3617141-3617201)
chr3 (8-67)||(4386774-4386831)
chr3 (5-67)||(23392106-23392166)
chr3 (5-67)||(24694963-24695023)
chr3 (5-67)||(26928396-26928456)
chr3 (5-67)||(36029322-36029382)
chr3 (5-67)||(40592579-40592639)
chr3 (275-306)||(43404484-43404515)
chr3 (1-56)||(2672783-2672840)
chr3 (1-56)||(2676939-2676996)
chr3 (189-267)||(23200564-23200642)
chr3 (1-56)||(24968283-24968340)
chr3 (6-56)||(8512398-8512450)
chr3 (6-56)||(8517278-8517330)
chr3 (209-246)||(28503520-28503557)
chr3 (277-322)||(40845221-40845266)
chr3 (8-67)||(21711454-21711511)
chr3 (8-67)||(23410529-23410586)
chr3 (5-84)||(32143552-32143629)
chr3 (5-64)||(47923704-47923761)
[»] scaffold0135 (2 HSPs)
scaffold0135 (130-335)||(34553-34777)
scaffold0135 (1-126)||(34846-34971)
[»] chr7 (80 HSPs)
chr7 (137-334)||(12406641-12406857)
chr7 (130-334)||(4873498-4873721)
chr7 (1-130)||(12397087-12397216)
chr7 (130-291)||(24023881-24024042)
chr7 (1-122)||(24024115-24024236)
chr7 (130-291)||(31109132-31109294)
chr7 (7-130)||(4873310-4873433)
chr7 (1-122)||(31109369-31109493)
chr7 (173-334)||(2058425-2058604)
chr7 (5-123)||(2058202-2058320)
chr7 (173-334)||(21640243-21640423)
chr7 (186-291)||(20357090-20357195)
chr7 (5-109)||(20357306-20357410)
chr7 (5-121)||(1533190-1533307)
chr7 (137-291)||(12397289-12397430)
chr7 (1-79)||(12406507-12406585)
chr7 (130-258)||(24265772-24265900)
chr7 (173-291)||(24789489-24789607)
chr7 (130-258)||(16880437-16880565)
chr7 (130-258)||(16885292-16885420)
chr7 (130-258)||(21811834-21811962)
chr7 (277-334)||(20357028-20357085)
chr7 (5-121)||(21640039-21640156)
chr7 (173-245)||(24260929-24261001)
chr7 (173-291)||(1532966-1533084)
chr7 (277-334)||(12397435-12397492)
chr7 (186-291)||(21646475-21646580)
chr7 (278-334)||(24023819-24023875)
chr7 (189-291)||(25767381-25767483)
chr7 (189-291)||(43504556-43504658)
chr7 (5-121)||(18408993-18409110)
chr7 (5-121)||(18413869-18413986)
chr7 (189-270)||(18414110-18414191)
chr7 (277-334)||(31109070-31109127)
chr7 (5-120)||(21646237-21646353)
chr7 (275-327)||(21983807-21983859)
chr7 (280-334)||(1532884-1532939)
chr7 (275-329)||(79953-80007)
chr7 (173-291)||(20343562-20343680)
chr7 (280-326)||(39730942-39730988)
chr7 (189-291)||(48408461-48408563)
chr7 (277-334)||(1562530-1562587)
chr7 (173-246)||(6592741-6592814)
chr7 (277-334)||(6592864-6592921)
chr7 (173-246)||(6594957-6595030)
chr7 (277-334)||(32060831-32060888)
chr7 (275-326)||(21989471-21989522)
chr7 (189-291)||(18409234-18409336)
chr7 (280-326)||(18414220-18414266)
chr7 (278-336)||(20343498-20343556)
chr7 (189-291)||(39730996-39731098)
chr7 (280-326)||(48408407-48408453)
chr7 (277-334)||(6595080-6595137)
chr7 (277-326)||(21811747-21811796)
chr7 (173-246)||(32060708-32060781)
chr7 (277-326)||(47264209-47264258)
chr7 (282-326)||(21646590-21646634)
chr7 (280-323)||(43504666-43504709)
chr7 (277-335)||(18392723-18392781)
chr7 (280-326)||(18409344-18409390)
chr7 (277-326)||(2479902-2479951)
chr7 (277-326)||(44847628-44847677)
chr7 (275-327)||(46515809-46515862)
chr7 (173-245)||(1562407-1562479)
chr7 (277-336)||(24260819-24260878)
chr7 (278-334)||(18390506-18390562)
chr7 (277-321)||(49092238-49092282)
chr7 (5-95)||(2479565-2479653)
chr7 (5-95)||(2580619-2580706)
chr7 (5-67)||(20284318-20284378)
chr7 (6-56)||(21812092-21812143)
chr7 (5-67)||(23402821-23402881)
chr7 (5-66)||(4796477-4796536)
chr7 (5-109)||(46516070-46516173)
chr7 (173-242)||(18389164-18389233)
chr7 (173-242)||(18392600-18392669)
chr7 (6-56)||(24266054-24266106)
chr7 (7-67)||(44847933-44847991)
chr7 (275-327)||(2647179-2647230)
chr7 (5-64)||(21989137-21989194)
[»] chr2 (55 HSPs)
chr2 (130-291)||(39811539-39811700)
chr2 (173-334)||(11098387-11098567)
chr2 (173-335)||(14291945-14292126)
chr2 (1-122)||(39811775-39811898)
chr2 (173-291)||(9295924-9296042)
chr2 (5-120)||(11098674-11098790)
chr2 (5-122)||(14291722-14291840)
chr2 (5-121)||(9296148-9296265)
chr2 (130-258)||(19344786-19344914)
chr2 (130-258)||(19349644-19349772)
chr2 (189-291)||(3492212-3492314)
chr2 (277-334)||(9295862-9295919)
chr2 (189-326)||(28258678-28258815)
chr2 (277-334)||(32247295-32247352)
chr2 (277-334)||(39811477-39811534)
chr2 (277-334)||(44310471-44310528)
chr2 (189-291)||(30832984-30833086)
chr2 (130-224)||(32247150-32247244)
chr2 (5-120)||(25409860-25409976)
chr2 (189-291)||(4484758-4484860)
chr2 (275-329)||(8389629-8389683)
chr2 (186-291)||(25410098-25410203)
chr2 (275-329)||(10706731-10706785)
chr2 (280-326)||(25410211-25410257)
chr2 (280-326)||(32289157-32289203)
chr2 (173-246)||(12647787-12647860)
chr2 (277-334)||(12647910-12647967)
chr2 (275-328)||(21630509-21630562)
chr2 (275-328)||(39483441-39483494)
chr2 (275-327)||(33528105-33528157)
chr2 (283-326)||(30832930-30832973)
chr2 (280-322)||(4484868-4484910)
chr2 (275-329)||(23077950-23078004)
chr2 (277-327)||(36757425-36757475)
chr2 (280-326)||(40739402-40739448)
chr2 (1-102)||(32246963-32247064)
chr2 (5-108)||(3491981-3492085)
chr2 (283-327)||(20522794-20522838)
chr2 (189-291)||(6266337-6266439)
chr2 (189-291)||(32289211-32289313)
chr2 (5-95)||(40739063-40739151)
chr2 (280-322)||(6266287-6266329)
chr2 (275-329)||(13569894-13569948)
chr2 (277-327)||(19344952-19345002)
chr2 (189-270)||(40739292-40739373)
chr2 (290-326)||(3492332-3492368)
chr2 (5-95)||(23078251-23078339)
chr2 (5-67)||(36757570-36757630)
chr2 (5-67)||(39483162-39483222)
chr2 (5-102)||(17865434-17865529)
chr2 (286-327)||(19349819-19349860)
chr2 (5-65)||(21630174-21630232)
chr2 (27-67)||(20522471-20522511)
chr2 (5-68)||(29867780-29867840)
chr2 (5-67)||(41586358-41586419)
[»] scaffold0355 (4 HSPs)
scaffold0355 (132-291)||(3399-3558)
scaffold0355 (1-130)||(3627-3758)
scaffold0355 (277-334)||(3337-3394)
scaffold0355 (1-40)||(9514-9553)
[»] scaffold0286 (2 HSPs)
scaffold0286 (174-291)||(22002-22119)
scaffold0286 (288-326)||(21948-21986)
[»] scaffold0009 (2 HSPs)
scaffold0009 (130-258)||(176545-176673)
scaffold0009 (6-56)||(176829-176881)
[»] scaffold0464 (3 HSPs)
scaffold0464 (130-258)||(722-850)
scaffold0464 (277-334)||(888-945)
scaffold0464 (6-102)||(542-638)
[»] scaffold0259 (3 HSPs)
scaffold0259 (130-258)||(1834-1962)
scaffold0259 (277-327)||(1746-1796)
scaffold0259 (6-56)||(2103-2155)
[»] scaffold0028 (3 HSPs)
scaffold0028 (130-258)||(148539-148667)
scaffold0028 (277-327)||(148451-148501)
scaffold0028 (6-56)||(148808-148860)
[»] scaffold0197 (5 HSPs)
scaffold0197 (130-258)||(13879-14007)
scaffold0197 (134-258)||(18759-18883)
scaffold0197 (277-327)||(18671-18721)
scaffold0197 (6-56)||(14161-14213)
scaffold0197 (7-56)||(19017-19068)
[»] scaffold0188 (4 HSPs)
scaffold0188 (5-121)||(17701-17818)
scaffold0188 (5-121)||(23794-23911)
scaffold0188 (186-291)||(17494-17599)
scaffold0188 (280-326)||(17440-17486)
[»] scaffold1455 (1 HSPs)
scaffold1455 (277-334)||(1709-1766)
[»] scaffold0491 (4 HSPs)
scaffold0491 (189-291)||(11589-11690)
scaffold0491 (280-326)||(9253-9299)
scaffold0491 (189-291)||(9144-9245)
scaffold0491 (280-326)||(11698-11744)
[»] scaffold0674 (2 HSPs)
scaffold0674 (173-246)||(4130-4203)
scaffold0674 (277-334)||(4253-4310)
[»] scaffold0098 (1 HSPs)
scaffold0098 (209-326)||(45678-45795)
[»] scaffold0006 (5 HSPs)
scaffold0006 (275-327)||(6250-6302)
scaffold0006 (275-327)||(3058-3110)
scaffold0006 (275-334)||(149599-149658)
scaffold0006 (278-322)||(132765-132809)
scaffold0006 (5-95)||(133059-133147)
[»] scaffold0565 (2 HSPs)
scaffold0565 (187-246)||(3019-3078)
scaffold0565 (277-334)||(3128-3185)
[»] scaffold1519 (1 HSPs)
scaffold1519 (189-291)||(545-647)
[»] scaffold0140 (2 HSPs)
scaffold0140 (280-326)||(7920-7966)
scaffold0140 (5-95)||(8197-8285)
[»] scaffold0087 (3 HSPs)
scaffold0087 (213-327)||(36332-36446)
scaffold0087 (278-326)||(43443-43491)
scaffold0087 (5-67)||(36640-36700)
[»] scaffold0137 (1 HSPs)
scaffold0137 (277-334)||(5859-5916)
[»] scaffold0036 (1 HSPs)
scaffold0036 (275-329)||(86151-86206)
[»] scaffold0510 (2 HSPs)
scaffold0510 (277-322)||(1096-1141)
scaffold0510 (189-246)||(1191-1248)


Alignment Details
Target: chr6 (Bit Score: 177; Significance: 3e-95; HSPs: 86)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 130 - 334
Target Start/End: Complemental strand, 14737289 - 14737085
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14737289 tccctagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaa 14737190  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737189 gatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 14737090  T
Q  330 caaca 334  Q
    |||||    
T  14737089 caaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 5266492 - 5266653
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  5266492 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 5266591  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266592 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 5266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 22010412 - 22010251
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010412 tccctagatcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 22010313  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  22010312 gatcgtgccacgatttggcgtcctgcaaactaacttacggccacttgaaatcgtgtcacgat 22010251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14737486 - 14737356
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14737486 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagttctctc 14737387  T
Q  101 tcaaagctcatacaagctctcttaagttctc 131  Q
    |||||||||||||||||||||||||||||||    
T  14737386 tcaaagctcatacaagctctcttaagttctc 14737356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 134 - 291
Target Start/End: Complemental strand, 14742145 - 14741988
Alignment:
Q  134 tagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 233  Q
    ||||||||||||||||||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14742145 tagatcgtgtcacgatctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatc 14742046  T
Q  234 gtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  14742045 gtgccacgatttggcgtcctgcaaactagctcacgaccacttgaaatcgtgtcacgat 14741988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 22010606 - 22010477
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010606 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 22010507  T
Q  101 tcaaagctcatacaagctctcttaagttct 130  Q
    || |||||||||||||||||||||||||||    
T  22010506 tctaagctcatacaagctctcttaagttct 22010477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 11857150 - 11857282
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857150 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 11857249  T
Q  101 tcaaagctcatacaagctctcttaagttctccc 133  Q
    || |||||||| |||||||||||||||||||||    
T  11857250 tctaagctcattcaagctctcttaagttctccc 11857282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 11857351 - 11857567
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || ||||||| |||||  |||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  11857351 atcgtgtcacgatttgcaacggacccaaggttgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtg 11857450  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 317  Q
    |||||||||||||||||||||| |||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||    
T  11857451 ccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 11857550  T
Q  318 tgaagccaatatcaaca 334  Q
    |||||||||||||||||    
T  11857551 tgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 14742346 - 14742222
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  14742346 taaaacccaaagtgattacaatgtttttcccaacccaagagacactctcaacaaagacacttaacccattggttccctcctttgttatccaagttctctc 14742247  T
Q  101 tcaaagctcatacaagctctcttaa 125  Q
    |||||||||||||||||||||||||    
T  14742246 tcaaagctcatacaagctctcttaa 14742222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 130 - 327
Target Start/End: Complemental strand, 28155294 - 28155097
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  28155294 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 28155195  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||| ||  ||||||||  | |||||||| ||  | | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28155194 gatcgtgccacgattttgcaccctgcaaacttggctcacgg-catctcagatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 30125185 - 30125080
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||  || ||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  286 cacgat 291  Q
    ||||||    
T  30125085 cacgat 30125080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 16839107 - 16839235
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  16839107 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 16839206  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  16839207 gatcgtgccacgattttgcttccagcaaa 16839235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 5674633 - 5674516
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| || ||||||     
T  5674633 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttatctctct 5674534  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  5674533 aagctcttccaagctctc 5674516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 6005783 - 6005911
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  6005783 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 6005882  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  6005883 gatcgtgccacgattttgcttccagcaaa 6005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 33330156 - 33330028
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33330156 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33330057  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  33330056 gatcgtgccacgattttgcttccagcaaa 33330028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 33335653 - 33335525
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33335653 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33335554  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  33335553 gatcgtgccacgattttgcttccagcaaa 33335525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 6438860 - 6438974
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  6438860 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaa 6438959  T
Q  230 gatcgtgccacgatt 244  Q
    |||||||||||||||    
T  6438960 gatcgtgccacgatt 6438974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 5343841 - 5343956
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  5343841 tccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 5343940  T
Q  230 gatcgtgccacgattt 245  Q
    ||||||| ||||||||    
T  5343941 gatcgtgtcacgattt 5343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 14741983 - 14741926
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741983 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 16652877 - 16652716
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   || |||||||||||| || | ||||| |||||| || ||  ||| |||  |||||||||||      
T  16652877 agtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacgactttgcaccctacaacctagctcacggcac 16652778  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |  ||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  16652777 cccgaaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 22010246 - 22010189
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010246 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 30125075 - 30125018
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30125075 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30125018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 2171939 - 2172041
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  2171939 acttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 2172038  T
Q  289 gat 291  Q
    |||    
T  2172039 gat 2172041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 5674410 - 5674313
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||| ||  |||||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  5674410 agtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 5674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 6136367 - 6136439
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 245  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||    
T  6136367 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt 6136439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28184680 - 28184757
Alignment:
Q  1 taaaacccaaggtgattacaatgttttt---cccaacccaagagacactctcaacaaagacactcaacccattggttc 75  Q
    ||||||||||||||||||| ||||||||   || ||||||||||||||||||||||||||| ||||||||||| ||||    
T  28184680 taaaacccaaggtgattactatgtttttttcccaaacccaagagacactctcaacaaagaccctcaacccatttgttc 28184757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 16578921 - 16579039
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  |||||||||||      
T  16578921 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16579020  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  16579021 cccgaaatcgtgtcacgat 16579039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 16616459 - 16616341
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  |||||||||||      
T  16616459 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctagctcacggcac 16616360  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  16616359 cccgaaatcgtgtcacgat 16616341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 6439026 - 6439083
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  6439026 aaatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaaca 6439083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 16579044 - 16579101
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16579044 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16579101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16616336 - 16616279
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16616336 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 258
Target Start/End: Original strand, 22709480 - 22709549
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  22709480 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 22709549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 27647635 - 27647530
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    |||||||||||||||||||||   |||||||||||||||| ||  ||||||||||||||| ||  |||||||  |||||||||||  |  ||||||||||    
T  27647635 gatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacgattttgcaccctgcaacctagctcacggcaccccgaaatcgtgt 27647536  T
Q  286 cacgat 291  Q
    ||||||    
T  27647535 cacgat 27647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28155480 - 28155379
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | |||||||| ||||    
T  28155480 taaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctccaagttttctc 28155381  T
Q  101 tc 102  Q
    ||    
T  28155380 tc 28155379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 5017028 - 5016976
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5017028 tgaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 5674281 - 5674229
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa-tatcaaca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5674281 tgtcacgatttctctgttcttccagaccacaaatttgaagccaactatcaaca 5674229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 6027001 - 6026941
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6027001 gatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6026941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 31086005 - 31085953
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31086005 tgaaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 22709590 - 22709636
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  22709590 tcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaa 22709636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 33342507 - 33342581
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  33342507 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 33342581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 6136490 - 6136547
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  6136490 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 6136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16554511 - 16554454
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16554511 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16631067 - 16631010
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  16631067 aaatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 25420854 - 25420797
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  25420854 aaattgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 5344007 - 5344067
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 337  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||  ||||||||    
T  5344007 aaatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaattccaacagta 5344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 27647524 - 27647480
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  27647524 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 27647480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 411851 - 411769
Alignment:
Q  189 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||    
T  411851 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggc 411769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 13151030 - 13150956
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  13151030 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 13150956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 16554634 - 16554516
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||||||| |||| ||  |||| ||  |||||||||||      
T  16554634 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16554535  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  16554534 cccgaaatcgtgtcacgat 16554516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 16631190 - 16631072
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||||||| |||| ||  |||| ||  |||||||||||      
T  16631190 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaattttgcaccctgtaacctagctcacggcac 16631091  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  16631090 cccgaaatcgtgtcacgat 16631072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 26253644 - 26253602
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  26253644 tcgtgtcacgatttctctgttctttcagaccacaaatttgaag 26253602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 33342631 - 33342689
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| |||| |||||||    
T  33342631 aaatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaacag 33342689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 34164625 - 34164551
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  34164625 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 34164551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 34166847 - 34166773
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  34166847 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 34166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 24714936 - 24714989
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaat 327  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24714936 tgaaatcgtgtcacgatttctctgtttttccaaaccacaaaatttgaagccaat 24714989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 25420977 - 25420904
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||||    
T  25420977 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgatttg 25420904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 34166723 - 34166678
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  34166723 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 34166678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 6026890 - 6026834
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||| || |||||||| ||||||||||||||| |||| ||||||    
T  6026890 aatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 6438680 - 6438776
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  6438680 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 6438776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 18234648 - 18234700
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  18234648 tgaaatcgtgtcaacatttctctgttcttccaaaccacaaatttaaagccaat 18234700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 411740 - 411698
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  411740 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 2172057 - 2172095
Alignment:
Q  288 cgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  2172057 cgatttctctgttcttccagaccacaaatttgaaaccaa 2172095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 3073178 - 3073280
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||| |  |||||| |||||||||||  |||| | |  ||||||||||  |  |||||||||||||    
T  3073178 acttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtagaccagctcacggcatcacgaaatcgtgtcac 3073277  T
Q  289 gat 291  Q
    |||    
T  3073278 gat 3073280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 3073288 - 3073330
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  3073288 tcgtgtcacgattttcctgttcttccagaccacaaatttgaag 3073330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 16839273 - 16839323
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  16839273 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 16839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 33329990 - 33329940
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33329990 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33329940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 13150906 - 13150861
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||    
T  13150906 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 13150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 22709241 - 22709327
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  22709241 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtt 22709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 23896899 - 23896944
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||    
T  23896899 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 33335477 - 33335437
Alignment:
Q  287 acgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  33335477 acgattcctctgttcttccaaaccacaaatttgaagccaat 33335437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 34151884 - 34151840
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34151884 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 34164500 - 34164456
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34164500 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaag 34164456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 306
Target Start/End: Original strand, 603770 - 603801
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttcca 306  Q
    ||||||||||||||||||||||||||||||||    
T  603770 tgaaatcgtgtcacgatttctctgttcttcca 603801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 5017364 - 5017304
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5017364 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5017304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 5571808 - 5571761
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  5571808 tgaaatcgtgtcacgatttctctattctcccaaaacacaaatttgaag 5571761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 21272514 - 21272467
Alignment:
Q  282 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaatat 21272467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 31936804 - 31936892
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  |||||||||| |||  ||| | |||||||||||||||||    ||| |||||||||| |||||||||    
T  31936804 acccaaggtgtttacaatgttt--cccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaagtt 31936892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 6005949 - 6005999
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||| ||||| ||||||||||||||||||||    
T  6005949 aaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaat 6005999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 6097931 - 6097973
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||| |||||| ||||||||||| |||||||||||||||    
T  6097931 tcgtgtcaggatttccctgttcttccaaaccacaaatttgaag 6097973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16838920 - 16838977
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  16838920 taaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 16838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33330354 - 33330297
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33330354 taaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33330297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33335851 - 33335794
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33335851 taaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33335794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 5757116 - 5757059
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 5757059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 6005598 - 6005650
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  6005598 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 6005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Original strand, 23896792 - 23896849
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 23896849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 10076724 - 10076672
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||| ||||||||||| ||||||||| || | ||||||||| ||||||||    
T  10076724 tgaaatcatgtcacgatttttctgttctttcaaaacacaaatttaaagccaat 10076672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 157; Significance: 3e-83; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 154 - 334
Target Start/End: Original strand, 8093 - 8273
Alignment:
Q  154 aacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcct 253  Q
    ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8093 aacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcct 8192  T
Q  254 gcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8193 gcaaactagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 4e-79; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 137 - 334
Target Start/End: Complemental strand, 10688815 - 10688618
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || | | ||| |||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688815 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 10688716  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688715 ccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 130 - 334
Target Start/End: Complemental strand, 25327887 - 25327664
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||| ||| ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327887 tccctagatcgtgtcacgagctgcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 25327788  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagacc 310  Q
    |||||||||| |||||||||||||||||| |||||||| ||||||||||||                   ||||||||||||||||||||||||||||||    
T  25327787 gatcgtgccatgatttggcgtcctgcaaactagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagacc 25327688  T
Q  311 acaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||    
T  25327687 acaaatttgaagccaatatcaaca 25327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 7289835 - 7289713
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289835 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 7289736  T
Q  101 tcaaagctcatacaagctctctt 123  Q
    || |||||| | |||||||||||    
T  7289735 tctaagctcttccaagctctctt 7289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 130 - 335
Target Start/End: Complemental strand, 10683962 - 10683738
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10683962 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 10683863  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagacc 310  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||                   |||||||||||||||||||||||    
T  10683862 gatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 10683763  T
Q  311 acaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||||||||||    
T  10683762 acaaatttgaagccaatatcaacag 10683738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 6311719 - 6311873
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || | | ||| |||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311719 atcgtgtcacgatttgcatctgacccaaggttgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 6311818  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  6311819 ccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgat 6311873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 137 - 335
Target Start/End: Complemental strand, 18852844 - 18852626
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggca-gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 235  Q
    ||||||||||||||||   | ||| ||||| | ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18852844 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18852745  T
Q  236 gccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagaccacaaat 316  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||                   |||||||||||||||||||||||||||||    
T  18852744 gccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaat 18852645  T
Q  317 ttgaagccaatatcaacag 335  Q
    |||||||||||||||||||    
T  18852644 ttgaagccaatatcaacag 18852626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 6311532 - 6311649
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |    
T  6311532 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgctatccaagttctatctcta 6311631  T
Q  105 agctcatacaagctctct 122  Q
    ||||| | ||||||||||    
T  6311632 agctcttccaagctctct 6311649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 18870238 - 18870083
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggca-gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 235  Q
    ||||||||||||||||   | ||| ||||| | ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870238 atcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgt 18870139  T
Q  236 gccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||    
T  18870138 gccacgatttggcgtcctgcaaactagctcacgacatcttgaaatcgtgtcacgat 18870083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 7289651 - 7289489
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||| ||||||||||||||| || | | ||  ||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7289651 tcccaagatcgtgtcacgatttgcatctgatccaaggtagacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaa 7289552  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggc-cacttgaaatcgtgtcacgat 291  Q
    ||||||| ||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  7289551 gatcgtgtcacgatttggcgtcctgcaaactagctcatggctcccttgaaatcgtgtcacgat 7289489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 30656102 - 30656282
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  30656102 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 30656201  T
Q  273 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30656202 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 173 - 337
Target Start/End: Original strand, 36979834 - 36980017
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||      
T  36979834 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 36979933  T
Q  273 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 337  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36979934 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 36980017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 30655880 - 30655996
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  |    
T  30655880 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctcttta 30655979  T
Q  105 agctcatacaagctctc 121  Q
    ||||| | |||||||||    
T  30655980 agctcttccaagctctc 30655996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 33037467 - 33037349
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||      
T  33037467 agtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcac 33037368  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    || ||||||||||||||||    
T  33037367 ctcgaaatcgtgtcacgat 33037349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 4759714 - 4759596
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  4759714 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 4759615  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    || ||||||||||||||||    
T  4759614 ctcgaaatcgtgtcacgat 4759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 18853030 - 18852913
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||     
T  18853030 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctct 18852931  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  18852930 aagctcttccaagctctc 18852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 18870424 - 18870307
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| | |||||||||     
T  18870424 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccatgtttctctctct 18870325  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  18870324 aagctcttccaagctctc 18870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 25689721 - 25689561
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||| |||||||||||  ||||||||||||||| ||  |||||||  ||||||||||| |    
T  25689721 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacgattttgcaccctgcaacctagctcacggc-a 25689623  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25689622 cccgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaaca 25689561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 10689003 - 10688884
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||| ||     
T  10689003 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgttatccaagtttctctttct 10688904  T
Q  104 aagctcatacaagctctctt 123  Q
     ||||| | |||||||||||    
T  10688903 tagctcttccaagctctctt 10688884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25328062 - 25327961
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| | |||||||||||||    
T  25328062 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttgatctccaagttctctc 25327963  T
Q  101 tc 102  Q
    ||    
T  25327962 tc 25327961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25328188 - 25328087
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||| | |||||||||||||    
T  25328188 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcatcaaagacacacaacccataggatccctcctttgatctccaagttctctc 25328089  T
Q  101 tc 102  Q
    ||    
T  25328088 tc 25328087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 33037671 - 33037554
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  33037671 acccaaggtgattacaatgtttttcccaacccaagagacactctctacgaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 33037572  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  33037571 aagctcttccaagctctc 33037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 39784548 - 39784420
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  39784548 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaa 39784449  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  39784448 gatcgtgccacgattttgcatccagcaaa 39784420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 35745755 - 35745870
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||  |||||||||| |||||||||||||||||||||||||||||||||    
T  35745755 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 35745854  T
Q  230 gatcgtgccacgattt 245  Q
    ||||||||||||||||    
T  35745855 gatcgtgccacgattt 35745870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 4759938 - 4759820
Alignment:
Q  5 acccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctc 102  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  4759938 acccaaggtgattacaatgttttttcccaacccaagagactctctctacaaagacactcaaccctttggttacctcctttgcaatccaagattctctctc 4759839  T
Q  103 aaagctcatacaagctctc 121  Q
     |||||| | |||||||||    
T  4759838 taagctcttccaagctctc 4759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 1261820 - 1261703
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  1261820 acccaaggtgattacaatgtttttcccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 1261721  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  1261720 aagctcttccaagctctc 1261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 36979611 - 36979726
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||  ||||||| |||||||||     
T  36979611 acccaaggtgattacaatgtttt-cccaacctaagagacactctctacaaagacactcaaccctttggttcccttctttgtaatccaagtttctctctct 36979709  T
Q  104 aagctcatacaagctct 120  Q
    |||||| | ||||||||    
T  36979710 aagctcttccaagctct 36979726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 1261595 - 1261477
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||      
T  1261595 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 1261496  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  1261495 cacgaaatcgtgtcacgat 1261477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 4759591 - 4759534
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4759591 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4759534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 18870078 - 18870021
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870078 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 33037344 - 33037287
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037344 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 39784382 - 39784324
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39784382 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacag 39784324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 5702011 - 5701959
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5702011 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 3439267 - 3439150
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||  |||||||||||      
T  3439267 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaacctagctcacggcac 3439169  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  3439168 cccgaaatcgtgtcacgat 3439150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 3439144 - 3439088
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  3439144 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 4456573 - 4456624
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  4456573 tgaaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 4456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 6311890 - 6311937
Alignment:
Q  289 gatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 336  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  6311890 gatttctctgttcttccagaccacaaatttgaagccaataacaacagt 6311937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 7289471 - 7289424
Alignment:
Q  290 atttctctgttcttccagaccacaaatttgaagccaatatcaacagta 337  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7289471 atttctctgttcttccagaccacaaatttgaagtcaatatcaacagta 7289424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 2627373 - 2627327
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  2627373 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 2627327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 2627483 - 2627381
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  | ||||||  |||||||||   |  |||||||||||||    
T  2627483 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacggaatcacgaaatcgtgtcac 2627384  T
Q  289 gat 291  Q
    |||    
T  2627383 gat 2627381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 338
Target Start/End: Original strand, 7412894 - 7412956
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacagtat 338  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  7412894 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaacagtat 7412956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 26288462 - 26288504
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26288462 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26288504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 26301719 - 26301761
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26301719 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26301761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 26313713 - 26313755
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26313713 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 26313755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 15290200 - 15290143
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  15290200 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 15470569 - 15470512
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  15470569 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 26288121 - 26288226
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26288121 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26288220  T
Q  104 aagctc 109  Q
    ||||||    
T  26288221 aagctc 26288226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 26288352 - 26288433
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26288352 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26288433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 26301378 - 26301483
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26301378 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26301477  T
Q  104 aagctc 109  Q
    ||||||    
T  26301478 aagctc 26301483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 26301609 - 26301690
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26301609 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26301690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 26313372 - 26313477
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| ||||||||| |||||||    |||||| ||||||  ||||||| |||||||||     
T  26313372 acccaaggtgtttacaatgtttttcccaactcaagagattctctctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctct 26313471  T
Q  104 aagctc 109  Q
    ||||||    
T  26313472 aagctc 26313477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 26313603 - 26313684
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   ||| |||||||||||||||||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26313603 acttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26313684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 42575852 - 42575909
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  42575852 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 31071095 - 31071035
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 65  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||    
T  31071095 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaac 31071035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 39784728 - 39784632
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  39784728 cccaaggtgattacaatgtttttcccaacctaagagactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 39784632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 42575723 - 42575802
Alignment:
Q  168 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||| |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  42575723 agaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 42575802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 15290324 - 15290250
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  15290324 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 15290250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 15470693 - 15470619
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  15470693 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 15470619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 31042963 - 31042921
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31042963 tcgtgtcacgatttctctattcttccagaccacaaatttgaag 31042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 23799151 - 23799099
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||| |||||    
T  23799151 tgaaatcgtgttacgatttctctgttctttcaaaccacaaatttgaaaccaat 23799099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 7412569 - 7412629
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||||| |||||||||||||||||    
T  7412569 acccaaggtgtttacaatgttt--cccaacccaagagatcctctctacaaagacactcaaccc 7412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 35745921 - 35745971
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  35745921 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 35745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 19175282 - 19175233
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||| |||||||| |||||||||||| ||| |||||||||||||||    
T  19175282 aaatcgtgacacgatttttctgttcttccaaaccgcaaatttgaagccaa 19175233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 4696476 - 4696416
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4696476 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 4696416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 7289666 - 7289629
Alignment:
Q  209 aatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  7289666 aatcgtgccacgatttcccaagatcgtgtcacgatttg 7289629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 7412787 - 7412868
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || || |||||||||| |  ||||||||  ||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggc 7412868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 10684168 - 10684116
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  10684168 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 10684116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 35745572 - 35745624
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  35745572 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 35745624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 23799441 - 23799384
Alignment:
Q  8 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    ||||||| ||||||||||   ||||||||||||||  ||||| |||||||||||||||||    
T  23799441 caaggtgtttacaatgttc--cccaacccaagagatcctctctacaaagacactcaaccc 23799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 6e-75; HSPs: 104)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 43592656 - 43592854
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592656 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43592755  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592756 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 31180669 - 31180830
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |      
T  31180669 agtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacgacac 31180768  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180769 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43592455 - 43592587
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592455 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 43592554  T
Q  101 tcaaagctcatacaagctctcttaagttctccc 133  Q
    || |||||||| |||||||||||||||||||||    
T  43592555 tctaagctcattcaagctctcttaagttctccc 43592587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43598900 - 43599032
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598900 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 43598999  T
Q  101 tcaaagctcatacaagctctcttaagttctccc 133  Q
    || |||||||| |||||||||||||||||||||    
T  43599000 tctaagctcattcaagctctcttaagttctccc 43599032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43604392 - 43604524
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604392 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 43604491  T
Q  101 tcaaagctcatacaagctctcttaagttctccc 133  Q
    || |||||||| |||||||||||||||||||||    
T  43604492 tctaagctcattcaagctctcttaagttctccc 43604524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 43609884 - 43610016
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609884 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 43609983  T
Q  101 tcaaagctcatacaagctctcttaagttctccc 133  Q
    || |||||||| |||||||||||||||||||||    
T  43609984 tctaagctcattcaagctctcttaagttctccc 43610016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27445146 - 27445273
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445146 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 27445245  T
Q  101 tcaaagctcatacaagctctcttaagtt 128  Q
    || |||||||| ||||||||||||||||    
T  27445246 tctaagctcattcaagctctcttaagtt 27445273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27449990 - 27450117
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449990 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 27450089  T
Q  101 tcaaagctcatacaagctctcttaagtt 128  Q
    || |||||||| ||||||||||||||||    
T  27450090 tctaagctcattcaagctctcttaagtt 27450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 15044861 - 15044992
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaa-cccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctct 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15044861 taaaacccaaggtgattacaatgtttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctct 15044960  T
Q  100 ct-caaagctcatacaagctctcttaagttct 130  Q
    || |||||||||||||||||||||||||||||    
T  15044961 ctacaaagctcatacaagctctcttaagttct 15044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1457071 - 1456952
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457071 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 1456972  T
Q  101 tcaaagctcatacaagctct 120  Q
    || |||||| | ||||||||    
T  1456971 tctaagctcttccaagctct 1456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 27445350 - 27445504
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445350 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 27445449  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  27445450 ccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgat 27445504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 27450193 - 27450409
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27450193 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 27450292  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 317  Q
    |||||||||||||||||||||| |||||||||||| ||||||||                   |||||||||||||||||||||||||||||||||||||    
T  27450293 ccacgatttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 27450392  T
Q  318 tgaagccaatatcaaca 334  Q
    |||||||||||||||||    
T  27450393 tgaagccaatatcaaca 27450409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 1456861 - 1456700
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||| ||| ||||||||||| || | | ||| ||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  1456861 tcccaagaccgtgtcacgatttgcatctgacccaaggtagacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaa 1456762  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  1456761 gatcgtgccacgatttggcgtcctgtaaactagctcacggccccttgaaatcgtgtcacgat 1456700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 29402728 - 29402545
Alignment:
Q  175 tccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccact 274  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  275 tgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtatg 339  Q
    ||||||                   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaatatg 29402545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 15045057 - 15045279
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| | |||  ||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15045057 tccctagatcgtgtcacgatctgcaacggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 15045156  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccact-------tg-----------aaatcgtgtcacgatttctctgttcttccagacca 311  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||       ||           |||||||||||||||||||||||||||||| || |    
T  15045157 gatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaacta 15045256  T
Q  312 caaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||    
T  15045257 caaatttgaagccaatatcaaca 15045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 43599101 - 43599318
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43599101 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43599200  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 316  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43599201 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43599300  T
Q  317 ttgaagccaatatcaaca 334  Q
    ||||||||||||||||||    
T  43599301 ttgaagccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 43604593 - 43604810
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604593 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43604692  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 316  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43604693 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43604792  T
Q  317 ttgaagccaatatcaaca 334  Q
    ||||||||||||||||||    
T  43604793 ttgaagccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 43610085 - 43610302
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| ||   | ||| ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43610085 atcgtgtcacgatttgcgtctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 43610184  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacgg-ccacttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaat 316  Q
    |||||||||||||||||||||| |||||||||| || ||||                   ||||||||||||||||||||||||||||||||||||||||    
T  43610185 ccacgatttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaat 43610284  T
Q  317 ttgaagccaatatcaaca 334  Q
    ||||||||||||||||||    
T  43610285 ttgaagccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 31180447 - 31180551
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |    
T  31180447 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctctcta 31180546  T
Q  105 agctc 109  Q
    |||||    
T  31180547 agctc 31180551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 30631640 - 30631734
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctct 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30631640 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagttctct 30631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 336
Target Start/End: Original strand, 30631768 - 30631950
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||      
T  30631768 agtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcacggcac 30631867  T
Q  273 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 336  Q
    || |                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631868 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 30631950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 33768548 - 33768676
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33768548 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33768647  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  33768648 gatcgtgccacgattttgcttccagcaaa 33768676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 33791680 - 33791808
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33791680 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 33791779  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  33791780 gatcgtgccacgattttgcttccagcaaa 33791808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 2785739 - 2785867
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||  | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2785739 tccctagatcgtgtcacgatctgcaacgctccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2785838  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  2785839 gatcgtgccacgattttgcttccagcaaa 2785867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 24136080 - 24136196
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  24136080 acccaaggtgattacaatgtttttcccaacccaagagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 24136179  T
Q  104 aagctcatacaagctct 120  Q
     ||||| | ||||||||    
T  24136180 tagctcttccaagctct 24136196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 28807299 - 28807171
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||    
T  28807299 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaa 28807200  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| ||  ||||||||    
T  28807199 gatcgtgccacgattttgcaccctgcaaa 28807171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 37561170 - 37561054
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||| |||||||||||| ||||| | | |||   || |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  37561170 tccctagatcatgtcacgatctgcaacggtccccaggttaaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 37561071  T
Q  230 gatcgtgccacgatttg 246  Q
    |||||||||||||||||    
T  37561070 gatcgtgccacgatttg 37561054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 31396712 - 31396585
Alignment:
Q  131 ccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 230  Q
    |||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| | ||||| ||||||||||||||||||||||||||    
T  31396712 ccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaag 31396613  T
Q  231 atcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||| |||||||| || ||| |||||    
T  31396612 atcgtggcacgattttgcttccagcaaa 31396585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 31401569 - 31401442
Alignment:
Q  131 ccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 230  Q
    |||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||  |||||||||||||||| |||||||||||||||||    
T  31401569 ccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaag 31401470  T
Q  231 atcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||| |||||||| || ||| |||||    
T  31401469 atcgtggcacgattttgcttccagcaaa 31401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 35387893 - 35388012
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||    |||||||||||||  ||||||| || ||||||     
T  35387893 acccaaggtgattacaatgttttttccaacccaagagaccctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctct 35387992  T
Q  104 aagctcatacaagctctctt 123  Q
    |||||| | |||||||||||    
T  35387993 aagctcttccaagctctctt 35388012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 24136303 - 24136421
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  |||||||| |||||||||||      
T  24136303 agtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcacggcat 24136402  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||| ||||||||||    
T  24136403 cacgaaattgtgtcacgat 24136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 1456695 - 1456638
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1456695 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 27445509 - 27445566
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27445509 aaatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 37556348 - 37556232
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| |    ||   || |||||||| ||| |||||||||| |||||||||||  |||||||||| |||||||||    
T  37556348 tccctagatcgtgtcacgatctgcaacggtcctctggttaaccagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaa 37556249  T
Q  230 gatcgtgccacgatttg 246  Q
    |||||||||||||||||    
T  37556248 gatcgtgccacgatttg 37556232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 18442068 - 18442170
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  | ||||||||||||||    
T  18442068 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcac 18442167  T
Q  289 gat 291  Q
    |||    
T  18442168 gat 18442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 26177631 - 26177529
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  26177631 acttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 26177532  T
Q  289 gat 291  Q
    |||    
T  26177531 gat 26177529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 38219629 - 38219734
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  38219629 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 38219728  T
Q  104 aagctc 109  Q
    ||||||    
T  38219729 aagctc 38219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 14520794 - 14520846
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14520794 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 9789644 - 9789746
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  9789644 acttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 9789743  T
Q  289 gat 291  Q
    |||    
T  9789744 gat 9789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 10592901 - 10592843
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  10592901 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 10592843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 16407696 - 16407650
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  16407696 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 16407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 22536672 - 22536790
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  || |||||||||||| ||  |||||||  |||||||||||      
T  22536672 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacgattttgcaccctgcaacctagctcacggcac 22536771  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  22536772 cccgaaatcgtgtcacgat 22536790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 25077886 - 25077813
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  25077886 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttg 25077813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 25135855 - 25135782
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||    
T  25135855 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacgatttg 25135782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 37556182 - 37556133
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37556182 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 37561004 - 37560955
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37561004 aaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaa 37560955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 22536796 - 22536852
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22536796 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 22536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 29720131 - 29720028
Alignment:
Q  189 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 287  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||  |  ||||||||||||    
T  29720131 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcaccacgaaatcgtgtca 29720032  T
Q  288 cgat 291  Q
    ||||    
T  29720031 cgat 29720028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 291 - 334
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  291 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 12083710 - 12083656
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  12083710 tgaaatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaatat 12083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 15465070 - 15465116
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  15465070 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 15465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 16407806 - 16407704
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  16407806 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 16407707  T
Q  289 gat 291  Q
    |||    
T  16407706 gat 16407704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 16409132 - 16409086
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16409132 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 16409086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 26177521 - 26177475
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  26177521 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaa 26177475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 25077763 - 25077718
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25077763 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25077718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 25135732 - 25135687
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  25135732 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 25135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 40379735 - 40379678
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  40379735 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 40379678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 11916504 - 11916453
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||| |||||||||||||||||||||| || |||||||||||||||||||    
T  11916504 tgaaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 11916453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 24136429 - 24136484
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 334  Q
    |||||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  24136429 tcgtgtcacgatttctgtgttcttccagaccacaaatttgaaaccaaatatcaaca 24136484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 36931898 - 36931855
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 323  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  36931898 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagc 36931855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 9789754 - 9789796
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  9789754 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9789796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 10593023 - 10592906
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | ||||||||||||||| ||  |||||||  || ||||||| ||    
T  10593023 agtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacgattttgcaccctgcaacctatctcacgg-ca 10592925  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  | ||||||||||||||    
T  10592924 cccggaatcgtgtcacgat 10592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 18442178 - 18442220
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  18442178 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 18442220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 26170522 - 26170420
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||  ||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  26170522 acttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 26170423  T
Q  289 gat 291  Q
    |||    
T  26170422 gat 26170420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 28807133 - 28807083
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  28807133 aaatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 28807479 - 28807429
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  28807479 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaag 28807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 29720020 - 29719978
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29720020 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29719978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 29722207 - 29722165
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29722207 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29722165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 29752335 - 29752377
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29752335 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 29752377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16544051 - 16543994
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16544051 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 16546273 - 16546216
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  16546273 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 35388196 - 35388233
Alignment:
Q  285 tcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaag 35388233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 38219865 - 38219946
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    ||||||| |||||||||   ||||||||||| |||||||||||||||| |||||||||||  ||| ||||  ||||||||||    
T  38219865 acttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaaccagctcacggc 38219946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 40381946 - 40381889
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| |||||||| |||||||||||||||||| |||| ||||||    
T  40381946 aaatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 9352864 - 9352816
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||| |||||||||||||||||||| || |||||||||||||||||||    
T  9352864 aatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaa 9352816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 24553395 - 24553307
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||| |  ||| |||||||||  |||||||||    
T  24553395 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttgtaatccaagtt 24553307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 29722318 - 29722215
Alignment:
Q  189 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 287  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||  | |||| | |||||||| ||  |  ||||||||||||    
T  29722318 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcaccacgaaatcgtgtca 29722219  T
Q  288 cgat 291  Q
    ||||    
T  29722218 cgat 29722215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 322
Target Start/End: Original strand, 29751672 - 29751711
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  29751672 tgtcacgatttccctgttcttccagaccacaaatttgaag 29751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 2785905 - 2785955
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  2785905 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 2785955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 26170412 - 26170366
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  26170412 tcgtgtcacgatttccctgttcttccataccataaatttgaagccaa 26170366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 31396547 - 31396497
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  31396547 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 31396497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 33768714 - 33768764
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33768714 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33768764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 33791846 - 33791896
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  33791846 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 33791896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 9352972 - 9352891
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    ||||||| |||||||||   ||||||||||||||||| ||  |||||||||||||||| |  ||||||||  ||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggc 9352891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 16409242 - 16409183
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 248  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| ||| |||||||    
T  16409242 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggc 16409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 29751564 - 29751615
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 224  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||    
T  29751564 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 36932216 - 36932128
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||   || | | |||||||||||||||    |||||||||||||| |||||||||    
T  36932216 acccaaggtgtttacaatgttt--cccaacccaagagatcatcactataaagacactcaaccctaaagttccctcctttgcaatccaagtt 36932128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 11181700 - 11181641
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 66  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  11181700 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaacc 11181641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 31401404 - 31401354
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| |||| |||| ||| ||||||||||||||||||||    
T  31401404 aaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaat 31401354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 2785556 - 2785608
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2785556 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2785608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 7160770 - 7160712
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    ||||||||||||||||||||  ||||| ||||||||  ||| | |||||||||||||||||    
T  7160770 ccaaggtgattacaatgttt--cccaatccaagagaacctcactacaaagacactcaaccc 7160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 14520461 - 14520519
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  14520461 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 14520519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 16544174 - 16544105
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  16544174 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 16546396 - 16546327
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  16546396 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16546327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 28832486 - 28832544
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 65  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  28832486 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaac 28832544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 31396895 - 31396843
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  31396895 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 31401752 - 31401700
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  31401752 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 31401700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 33768365 - 33768417
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33768365 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33768417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 33791497 - 33791549
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  33791497 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 33791549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 40379858 - 40379789
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  40379858 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40379789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 40382069 - 40382000
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  40382069 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40382000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 29752267 - 29752327
Alignment:
Q  231 atcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||  |||||||  |||||||||||  |  ||||||||||||||||    
T  29752267 atcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgat 29752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 37556527 - 37556432
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||| ||||||||||| |||| |||||| || |||||  || || ||||| || ||||  ||||| | |||||||| ||||||    
T  37556527 cccaaggtgattacaatg-ttttcccaacctaagaaacactcacatcaaaggaacacaccccataggatcccctctttgatctccaagttttctctc 37556432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 37561349 - 37561254
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||| ||||||||||| |||| |||||| || |||||  || || ||||| || ||||  ||||| | |||||||| ||||||    
T  37561349 cccaaggtgattacaatg-ttttcccaacctaagaaacactcacatcaaaggaacacaccccataggatcccctctttgatctccaagttttctctc 37561254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 6e-75; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 130 - 335
Target Start/End: Complemental strand, 9224122 - 9223898
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224122 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 9224023  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca-------------------cgatttctctgttcttccagacc 310  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||                   |||||||||||||||||||||||    
T  9224022 gatcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 9223923  T
Q  311 acaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||||||||||    
T  9223922 acaaatttgaagccaatatcaacag 9223898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 9228909 - 9228748
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228909 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 9228810  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9228809 gatcgtgccacgatttggcgtcctgcaaacgagctcacggccacttgaaatcgtgtcacgat 9228748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 173 - 339
Target Start/End: Original strand, 29761078 - 29761244
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  29761078 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 29761177  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtatg 339  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  29761178 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaacaatatg 29761244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 18712476 - 18712317
Alignment:
Q  132 cctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 231  Q
    ||||||| ||||||||||||  ||||||| |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712476 cctagattgtgtcacgatcttcaacggacccaaggttgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 18712377  T
Q  232 tcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18712376 tcgtgccacgatttggcgtcctgcaaactagctcacggccacttgaaatcgtgtcacgat 18712317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 51520633 - 51520759
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51520633 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctccttttctatccaagttctctc 51520732  T
Q  101 tcaaagctcatacaagctctcttaagt 127  Q
    || |||||||| |||||||||||||||    
T  51520733 tctaagctcattcaagctctcttaagt 51520759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9224316 - 9224191
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9224316 taaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 9224217  T
Q  101 tcaaagctcatacaagctctcttaag 126  Q
    || |||||||||||||||||||||||    
T  9224216 tctaagctcatacaagctctcttaag 9224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9229103 - 9228978
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9229103 taaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 9229004  T
Q  101 tcaaagctcatacaagctctcttaag 126  Q
    || |||||||||||||||||||||||    
T  9229003 tctaagctcatacaagctctcttaag 9228978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18712675 - 18712567
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18712675 taaaacccaaggtgataacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 18712576  T
Q  101 tcaaagctc 109  Q
    | |||||||    
T  18712575 taaaagctc 18712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 51520870 - 51521050
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  51520870 agtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggccc 51520969  T
Q  273 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520970 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 130 - 334
Target Start/End: Complemental strand, 56141735 - 56141511
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||| ||||||||||||||| || | | ||| ||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56141735 tcccaagatcgtgtcacgatttgcatctgacccaaggtagaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 56141636  T
Q  230 gatcgtgccacga-tttggcgtcctgcaaagtagctcacggccact--------tg-----------aaatcgtgtcacgatttctctgttcttccagac 309  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||        ||           |||||||||||||||||||||||||||||||||    
T  56141635 gatcgtgccacgattttggcgtcctgcaaactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 56141536  T
Q  310 cacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||    
T  56141535 cacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 173 - 337
Target Start/End: Original strand, 24742397 - 24742580
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  24742397 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24742496  T
Q  273 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 337  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742497 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagta 24742580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 130 - 291
Target Start/End: Original strand, 5733023 - 5733185
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  5733023 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 5733122  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagc-tcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||| ||||||||||||||||||||| | || |||||||  |  ||||||||||||||||    
T  5733123 gatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgat 5733185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 3814383 - 3814605
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacgga-ctcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca 228  Q
    |||||||||| |||||||||||| |||||  |||| ||  ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  3814383 tccctagatcttgtcacgatctgcaacggttctca-ggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttccca 3814481  T
Q  229 agatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagac 309  Q
    | |||||| |||||||||||||| |||||| | ||| |||| ||||||||||                   |||||||||||||||||||||||||||||    
T  3814482 a-atcgtgacacgatttggcgtcttgcaaacttgcttacggtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagac 3814580  T
Q  310 cacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||    
T  3814581 cacaaatttgaagccaatatcaaca 3814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 24742174 - 24742291
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  24742174 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 24742273  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  24742274 aagctcttccaagctctc 24742291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 130 - 297
Target Start/End: Complemental strand, 45357021 - 45356854
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45357021 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 45356922  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgatttctct 297  Q
    |||||||||||||||| || ||| |||||  | |||||||| ||  | |||||||||||||| ||||||    
T  45356921 gatcgtgccacgattttgcatccagcaaacttggctcacgg-catctcaaatcgtgtcacganttctct 45356854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 45347540 - 45347412
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45347540 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 45347441  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  45347440 gatcgtgccacgattttgcatccagcaaa 45347412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 18856086 - 18856214
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||| |||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18856086 tccctagatcatgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 18856185  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||| ||||||||||| || ||| |||||    
T  18856186 gatcttgccacgattttgcatccagcaaa 18856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 29760874 - 29760965
Alignment:
Q  5 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||    
T  29760874 acccaaggtgattacaatgttttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtt 29760965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 3814198 - 3814299
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| || ||||| || ||||||||||| | |||||||| ||||    
T  3814198 taaaacccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaagacacacaccccataggatccctcctttgatgtccaagttttctc 3814297  T
Q  101 tc 102  Q
    ||    
T  3814298 tc 3814299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 9228743 - 9228686
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9228743 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 18856252 - 18856309
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18856252 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 18860464 - 18860521
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18860464 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18860521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 16628405 - 16628351
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16628405 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 16628351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 38151970 - 38151916
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38151970 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 38151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 5733190 - 5733247
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  5733190 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 5733247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 7122447 - 7122374
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  7122447 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 7122374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 7124669 - 7124596
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  7124669 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 7124596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 3778116 - 3778167
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 3778167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 8393039 - 8392980
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 336  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  8393039 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacagt 8392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 5143809 - 5143859
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5143809 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 8393167 - 8393089
Alignment:
Q  168 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||| |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  8393167 agaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 8393089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 8689094 - 8689044
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8689094 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 13992714 - 13992816
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  |||||||| |  |  |||||||||||||    
T  13992714 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacgaaatcgtgtcac 13992813  T
Q  289 gat 291  Q
    |||    
T  13992814 gat 13992816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 13992824 - 13992870
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13992824 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 13992870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 16622826 - 16622772
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  16622826 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaatat 16622772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 31495737 - 31495839
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  31495737 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 31495836  T
Q  289 gat 291  Q
    |||    
T  31495837 gat 31495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 45347374 - 45347324
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45347374 aaatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 8395248 - 8395191
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8395248 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 10047930 - 10047983
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  10047930 tgaaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaata 10047983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 28468142 - 28468061
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   |||||||||||||||| ||||||||||| |||||||||||  ||||||||  ||||||||||    
T  28468142 acttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggc 28468061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 28468404 - 28468287
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | ||||||||||| |||||    |||||||||||||  ||||||| |||||||||     
T  28468404 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctct 28468305  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  28468304 aagctcttccaagctctc 28468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 5732844 - 5732940
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | |||||||| ||||||    
T  5732844 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctccaagttttctctc 5732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 6742948 - 6742896
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6742948 tgaaatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45347726 - 45347658
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat 69  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| || |||||    
T  45347726 taaaccccaaggtgattacaatgtttttcccaacctaagagacactctcatcaaaggcacacaccccat 45347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 5148244 - 5148294
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  5148244 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 5268749 - 5268699
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5268749 aaatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 28468032 - 28467986
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  28468032 tcgtgtcacgatttctctgttcttccataccacaaatttgaagccaa 28467986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 54867743 - 54867795
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  54867743 tgaaatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 335
Target Start/End: Complemental strand, 7122324 - 7122266
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||    
T  7122324 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaacag 7122266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 9194162 - 9194216
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 328  Q
    |||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  9194162 tgaaatcgtgtcacaatttctctgttcttccaaaaccacaaatttgaagccaata 9194216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 31495847 - 31495889
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  31495847 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 31495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 31985182 - 31985136
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  31985182 tcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaa 31985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 5135706 - 5135649
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5135706 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 5135817 - 5135756
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  5135817 gatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 5135756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 5137932 - 5137875
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| |||||||||||  |||||||||||||| |||| ||||||    
T  5137932 aaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 5138043 - 5137982
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  5138043 gatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacgatttg 5137982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 7124546 - 7124501
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  7124546 aaatcgtgtcacgatttccctgttcttccacaccacaaatttgaag 7124501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 8395371 - 8395298
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| || |||||||||||| || | ||||||| ||||||||    
T  8395371 agtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacgatttg 8395298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45357206 - 45357105
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||    
T  45357206 taaaccccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctc 45357107  T
Q  101 tc 102  Q
    ||    
T  45357106 tc 45357105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 36314763 - 36314715
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 323  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36314763 tgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36314715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 36328972 - 36328924
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 323  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  36328972 tgaaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaagc 36328924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 18855906 - 18855956
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||||||||||||| |||| || |||||| |||||    
T  18855906 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaag 18855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 5112466 - 5112523
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 64  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| ||||||||||||||||    
T  5112466 acccaaggtgtttacaatgttt--cccaacccaagagaacctcacaacaaagacactcaa 5112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 5396223 - 5396176
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 323  Q
    |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  5396223 tgaaatcgtg-cacgatttctctgttctttcaaaccacaaatttgaagc 5396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 16628740 - 16628655
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaa 92  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    ||| |||||||||| ||||||    
T  16628740 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatccaa 16628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 3777778 - 3777838
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  3777778 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 3777838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 5396539 - 5396479
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5396539 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5396479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 16623161 - 16623101
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  16623161 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 16623101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 5269066 - 5269008
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  5269066 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 5269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 56141750 - 56141713
Alignment:
Q  209 aatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  56141750 aatcgtgccacgatttcccaagatcgtgtcacgatttg 56141713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 6743283 - 6743226
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 64  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  6743283 acccaaggtgtttacaatgttt--cccaacccaagagatcctcgctacaaagacactcaa 6743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 25861898 - 25861841
Alignment:
Q  8 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  25861898 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 25861841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 24793827 - 24793666
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  24793827 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 24793728  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793727 ctcgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 130 - 336
Target Start/End: Original strand, 41398618 - 41398823
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| | ||||| | |||  ||| |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  41398618 tccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 41398717  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||||||||||||||||||||||||| | |||||||| ||  | ||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  41398718 gatcgtgccacgatttggcgtcctgcaaactggctcacgg-catctcaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaaat 41398816  T
Q  330 caacagt 336  Q
    |||||||    
T  41398817 caacagt 41398823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 41398411 - 41398542
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatccaagttctct 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41398411 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagttctct 41398510  T
Q  100 ctc-aaagctcatacaagctctcttaagttct 130  Q
    ||| ||||||||||||||||||||||||||||    
T  41398511 ctcaaaagctcatacaagctctcttaagttct 41398542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 41390756 - 41390887
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatccaagttctct 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  41390756 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaatccatttggttccctcctttgctatccaagttctct 41390855  T
Q  100 ctc-aaagctcatacaagctctcttaagttct 130  Q
    ||| ||||||||||||||||||||||||||||    
T  41390856 ctcaaaagctcatacaagctctcttaagttct 41390887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 41390963 - 41391185
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| | ||||| | |||  ||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  41390963 tccctagatcgtgtcacgatctgcagcggaccccaggttgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaa 41391062  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccact-------tg-----------aaatcgtgtcacgatttctctgttcttccagacca 311  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||       ||           |||||||||||||||||||||||||||||||||||    
T  41391063 gatcgtgccacgatttggcgtcctgcaaactggctcacggcatctcaaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagacca 41391162  T
Q  312 caaatttgaagccaatatcaaca 334  Q
    ||||||||||||||| |||||||    
T  41391163 caaatttgaagccaaaatcaaca 41391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 24787226 - 24787111
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaaa 105  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  24787226 cccaaggtgattataatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctctctaa 24787127  T
Q  106 gctcatacaagctctc 121  Q
    |||| | |||||||||    
T  24787126 gctcttccaagctctc 24787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 1054737 - 1054609
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| |||||   | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1054737 tccctagatcgtgtcacgatctgcaacggttcccaggttgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaa 1054638  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||||||||||||||||    
T  1054637 gatcgtgccacgatttggcgtcctgcaaa 1054609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 39445859 - 39445987
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  39445859 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaa 39445958  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||||||||||||||||    
T  39445959 gatcgtgccacgatttggcgtcctgcaaa 39445987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 24787005 - 24786908
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24787005 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggc 24786908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 44023600 - 44023472
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  44023600 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 44023501  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  44023500 gatcgtgccacgattttgcatccagcaaa 44023472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 25439622 - 25439494
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||| | | | |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  25439622 tccctagatcgtgtcacgatctgcaacagtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaa 25439523  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || |||||||||    
T  25439522 gatcgtgccacgattttgcatcctgcaaa 25439494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 24202635 - 24202517
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  24202635 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 24202536  T
Q  104 aagctcatacaagctctct 122  Q
    |||||| | ||||||||||    
T  24202535 aagctcttccaagctctct 24202517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 25444815 - 25444687
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||    
T  25444815 tccctagatcgtgtcacgatctgcaacggtccctaggttgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaa 25444716  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || |||| ||||    
T  25444715 gatcgtgccacgattttgcatcctacaaa 25444687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 43988172 - 43988044
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  43988172 tccctagatcgtgtcacgatatgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaa 43988073  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    ||||||| |||||||| || ||| |||||    
T  43988072 gatcgtggcacgattttgcttccagcaaa 43988044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 20622640 - 20622758
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||||||  |||||| |||||||||||  |||||| | |||||||||||      
T  20622640 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcagactagctcacggcac 20622739  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  20622740 cacgaaatcgtgtcacgat 20622758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 39446025 - 39446082
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39446025 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39446082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 44023434 - 44023377
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44023434 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 19361077 - 19360975
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  19361077 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 19360978  T
Q  289 gat 291  Q
    |||    
T  19360977 gat 19360975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 1054571 - 1054514
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1054571 aaatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 19366174 - 19366057
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  19366174 acccaaggtgtttacaatatttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 19366075  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  19366074 aagctcttccaagctctc 19366057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 13598965 - 13599017
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13598965 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 191 - 291
Target Start/End: Complemental strand, 19365931 - 19365831
Alignment:
Q  191 ttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacga 290  Q
    |||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacga 19365832  T
Q  291 t 291  Q
    |    
T  19365831 t 19365831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 326
Target Start/End: Complemental strand, 21536172 - 21536121
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21536172 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21536121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 24202306 - 24202260
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  24202306 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 24202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 25439456 - 25439406
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25439456 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 25444649 - 25444599
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25444649 aaatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 51765155 - 51765053
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  51765155 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 51765056  T
Q  289 gat 291  Q
    |||    
T  51765055 gat 51765053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 9036060 - 9036003
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9036060 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 44203275 - 44203218
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44203275 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 44203218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 44203398 - 44203325
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  44203398 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 44203325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 37070332 - 37070384
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37070332 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaaaccaat 37070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 13659838 - 13659897
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  13659838 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 21053594 - 21053539
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  21053594 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacag 21053539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 19360967 - 19360921
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  19360967 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 19360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 51765045 - 51764999
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  51765045 tcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaa 51764999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 19358709 - 19358593
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||| |||||||||| |||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  19358709 acccaaggtgtttacaatgtttt-cccaacccaaaagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 19358611  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  19358610 aagctcttccaagctctc 19358593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 19361298 - 19361182
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||| ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||| ||| |||||||||     
T  19361298 acccaaggtgtttacaatgtttt-cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctct 19361200  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  19361199 aagctcttccaagctctc 19361182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 13604152 - 13604108
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  13604152 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13604108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 3282271 - 3282322
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  3282271 tgaaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaa 3282322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 9986950 - 9986891
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 248  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||    
T  9986950 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggc 9986891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 9986840 - 9986798
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  9986840 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 9986798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 19365823 - 19365781
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  19365823 tcgtgtcacgatttctctgttctttcagaccacaaatttgaag 19365781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 20622766 - 20622808
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  20622766 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 20622808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25439806 - 25439705
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||    
T  25439806 taaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctc 25439707  T
Q  101 tc 102  Q
    ||    
T  25439706 tc 25439705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25444999 - 25444898
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||| |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||    
T  25444999 taaatcccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctc 25444900  T
Q  101 tc 102  Q
    ||    
T  25444899 tc 25444898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 1054917 - 1054821
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  1054917 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 1054821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 16124240 - 16124188
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||| |||||||||||||||||||||| ||||||||||| || |||||    
T  16124240 tgaaatcgtatcacgatttctctgttcttccaaaccacaaatttaaaaccaat 16124188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 39445679 - 39445775
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  39445679 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 39445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 44023779 - 44023683
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  44023779 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 44023683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 40282124 - 40282021
Alignment:
Q  189 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtca 287  Q
    ||||||||||||||||| |  |||||||||||||||| |||  |||||| |||||||||||  |||||||  |||||||||||  |   |||||||||||    
T  40282124 acttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaacctagctcacggcaccactaaatcgtgtca 40282025  T
Q  288 cgat 291  Q
    ||||    
T  40282024 cgat 40282021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 9036183 - 9036065
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||  ||| || ||| ||||| || ||  |||||||  |||||||||||      
T  9036183 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacgaatttgcaccctgcaacctagctcacggcac 9036084  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  9036083 cccgaaatcgtgtcacgat 9036065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 26644431 - 26644381
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||| |||||||| ||||||||||||| ||||||||||| ||||||||    
T  26644431 aaatcgtatcacgattcctctgttcttccaaaccacaaatttaaagccaat 26644381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 40282013 - 40281971
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  40282013 tcgtgtcacgatttccctattcttccagaccacaaatttgaag 40281971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 21053705 - 21053645
Alignment:
Q  189 acttaacgagcaagttt-ctgaatcgtgtcacgatttcccaagatcgtgccacgatttggc 248  Q
    ||||||||||||||||| |  ||||||||||||||||||||  |||||| |||||||||||    
T  21053705 acttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggc 21053645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13604490 - 13604402
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||  |||||||||    
T  13604490 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttgtaatccaagtt 13604402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 29652379 - 29652418
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaa 314  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  29652379 tgaaatcgtatcacgatttctctgttcttccaaaccacaa 29652418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 47098693 - 47098633
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47098693 acccaaggtgtttacaatgttt--cccaacccaagagaacctcgctacaaagacactcaaccc 47098633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 47102707 - 47102647
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  47102707 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 47102647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 3281936 - 3281995
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 66  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  3281936 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 3281995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 10924860 - 10924807
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    |||||||||||||||||||||||||| ||| |   ||||| |||||||||||||    
T  10924860 tgaaatcgtgtcacgatttctctgtttttcaacttcacaattttgaagccaata 10924807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 43988366 - 43988314
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  43988366 cccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 43988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 37069998 - 37070055
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 66  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||||    
T  37069998 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaacc 37070055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 123)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 8738703 - 8738542
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||      
T  8738703 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 8738604  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738603 cttgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 9090941 - 9090780
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||      
T  9090941 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttagcgtcctgcaaactagctcacggcac 9090842  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090841 cttgaaatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22173104 - 22172985
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  22173104 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctactttgctatccaagttctctt 22173005  T
Q  101 tcaaagctcatacaagctct 120  Q
    || |||||||||||||||||    
T  22173004 tctaagctcatacaagctct 22172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 28503542 - 28503381
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||| ||||||||||||||| ||   | ||| |||||  |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28503542 tcccaagatcgtgtcacgatttgcgtctgacccaaggttgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaa 28503443  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||    
T  28503442 gatcgtgccacgatttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgat 28503381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 7167702 - 7167882
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  7167702 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 7167801  T
Q  273 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||                   |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7167802 cttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaaca 7167882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 169 - 291
Target Start/End: Complemental strand, 28501336 - 28501214
Alignment:
Q  169 gacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacg 268  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  28501336 gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaaactagctcacg 28501237  T
Q  269 gccacttgaaatcgtgtcacgat 291  Q
    ||| |||||||||||||||||||    
T  28501236 gccccttgaaatcgtgtcacgat 28501214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 137 - 291
Target Start/End: Complemental strand, 22172878 - 22172724
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || ||||||  |||||  ||| |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22172878 atcgtgtcacgatttgcaacggaaccaaggttgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 22172779  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||| | |||||||||  || ||||||||||||||||    
T  22172778 ccacgatttggcgtcctgcaaactggctcacggcacctcgaaatcgtgtcacgat 22172724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 130 - 291
Target Start/End: Original strand, 18656805 - 18656967
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18656805 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 18656904  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagc-tcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||| ||||||||||||||||||||| | || |||||||  |  ||||||||||||||||    
T  18656905 gatcgtgtcacgatttggcgtcctgcaaacttgcttcacggcaccacgaaatcgtgtcacgat 18656967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 40372436 - 40372318
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  40372436 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 40372337  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    || ||||||||||||||||    
T  40372336 ctcgaaatcgtgtcacgat 40372318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 27352261 - 27352143
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||      
T  27352261 agtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggtgttctgcaaacaagctcacggcac 27352162  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||    
T  27352161 cttgaaatcgtgtcacgat 27352143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 8738926 - 8738809
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||     
T  8738926 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaacccattggttccctcctttgcaatccaagtttctctctct 8738827  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  8738826 aagctcttccaagctctc 8738809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 40372659 - 40372539
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  40372659 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 40372560  T
Q  104 aagctcatacaagctctctta 124  Q
    |||||| | ||||||||||||    
T  40372559 aagctcttccaagctctctta 40372539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 2671245 - 2671127
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||      
T  2671245 agtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 2671146  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    ||||||||| |||||||||    
T  2671145 cttgaaatcatgtcacgat 2671127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 7167478 - 7167595
Alignment:
Q  5 acccaaggtgattacaatgtttt-tcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctc 102  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  7167478 acccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagtttctctctc 7167577  T
Q  103 aaagctcatacaagctct 120  Q
     |||||| | ||||||||    
T  7167578 taagctcttccaagctct 7167595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 2671449 - 2671333
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  2671449 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 2671350  T
Q  104 aagctcatacaagctct 120  Q
    |||||| | ||||||||    
T  2671349 aagctcttccaagctct 2671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 8477598 - 8477717
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||  ||||||| |||||||||     
T  8477598 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctctgtaatccaagtttctctctct 8477697  T
Q  104 aagctcatacaagctctctt 123  Q
    |||||| | |||||||||||    
T  8477698 aagctcttccaagctctctt 8477717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 173 - 291
Target Start/End: Original strand, 8477822 - 8477940
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||      
T  8477822 agtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacgatttggcatccagcaaactagctcacggcac 8477921  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    || ||||||||||||||||    
T  8477922 ctcgaaatcgtgtcacgat 8477940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 28501560 - 28501462
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttgctatccaagttctctctc 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||||||||||||||    
T  28501560 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcatcccttttggttccctcctttgttatccaagttctctctc 28501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 28503727 - 28503629
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc-attggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  28503727 acccaaggtgattacaatatttttcccaacccaagagacactctcaacaaagacactcaacccttttggttccctcctttgttatccaagttctctctc 28503629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 6718449 - 6718288
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||||||  |||||||||||      
T  6718449 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6718350  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |  ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6718349 cccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 9091164 - 9091047
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  9091164 acccaaggtgattacaatgtttttcccaacccaagagatactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 9091065  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  9091064 aagctcttccaagctctc 9091047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 32143782 - 32143919
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  |||||||| |||||||||||  |   ||||||||||||    
T  32143782 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacaaaatcgtgtcac 32143881  T
Q  289 gatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32143882 gatttctctgttctttcagaccacaaatttgaagccaa 32143919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 2672642 - 2672514
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  2672642 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2672543  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    ||||||| |||||||| || ||| |||||    
T  2672542 gatcgtggcacgattttgcttccagcaaa 2672514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 8512604 - 8512732
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8512604 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 8512703  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  8512704 gatcgtgccacgattttgcttccagcaaa 8512732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 8517484 - 8517612
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  8517484 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 8517583  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  8517584 gatcgtgccacgattttgcttccagcaaa 8517612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 45282746 - 45282585
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| ||||| || ||  |||||||  |||||||||||      
T  45282746 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacgaatttgcaccctgcaacctagctcacggcac 45282647  T
Q  273 cttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |  ||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  45282646 cccgaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 45282585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 2676798 - 2676670
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  2676798 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaa 2676699  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    ||||||| |||||||| || ||| |||||    
T  2676698 gatcgtggcacgattttgcttccagcaaa 2676670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 24968481 - 24968609
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||| |||||| || ||||| | | |||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  24968481 tccctagatcgtggcacgatttgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 24968580  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  24968581 gatcgtgccacgattttgcttccagcaaa 24968609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 32475848 - 32475963
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32475848 tccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 32475947  T
Q  230 gatcgtgccacgattt 245  Q
    ||||||| ||||||||    
T  32475948 gatcgtgtcacgattt 32475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 32480706 - 32480821
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  32480706 tccctagatcgtgtcacgatatgcaacggtccccaagatgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 32480805  T
Q  230 gatcgtgccacgattt 245  Q
    ||||||| ||||||||    
T  32480806 gatcgtgtcacgattt 32480821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 22172719 - 22172662
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22172719 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 40372313 - 40372256
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372313 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 40372256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 1306439 - 1306541
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||  ||||||||  |||||||| |  |  |||||||||||||    
T  1306439 acttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacgacaccacgaaatcgtgtcac 1306538  T
Q  289 gat 291  Q
    |||    
T  1306539 gat 1306541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 28501209 - 28501152
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28501209 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 28503376 - 28503319
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28503376 aaatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 189 - 321
Target Start/End: Complemental strand, 27986103 - 27985971
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    ||||||| |||||||||   ||||||||||||||| | ||  |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  289 gatttctctgttcttccagaccacaaatttgaa 321  Q
    |||||||||||| ||||| ||||||||||||||    
T  27986003 gatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 30709318 - 30709264
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30709318 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 30709264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 18656972 - 18657029
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  18656972 aaatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaaca 18657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 36029659 - 36029711
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36029659 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 36029711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 168 - 288
Target Start/End: Complemental strand, 54634895 - 54634775
Alignment:
Q  168 agacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcac 267  Q
    |||| |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||| ||  |||||||  ||||||||    
T  54634895 agaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattttgcaccctgcaacttagctcac 54634796  T
Q  268 ggccacttgaaatcgtgtcac 288  Q
    |||  |  |||||||||||||    
T  54634795 ggcaccccgaaatcgtgtcac 54634775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 21711767 - 21711818
Alignment:
Q  276 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711767 gaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 27974537 - 27974442
Alignment:
Q  231 atcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||| |  ||||||||  ||||||||||      |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27974537 atcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 27974442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 6716265 - 6716147
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| ||  |||||||  |||||||||||      
T  6716265 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcaccctgcaacctagctcacggcac 6716166  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  6716165 cccgaaatcgtgtcacgat 6716147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 23198475 - 23198521
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23198475 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23198521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 23200674 - 23200720
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23200674 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 23200720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 26928135 - 26928089
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  26928135 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 26928089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 1306179 - 1306296
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||||| |    ||||||||||||   ||||||| |||||||||     
T  1306179 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaactctagagttccctcctttataatccaagtttctctctct 1306278  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  1306279 aagctcttccaagctctc 1306296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 3617091 - 3617034
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3617091 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 16264895 - 16264948
Alignment:
Q  276 gaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  16264895 gaaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaatat 16264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 54634767 - 54634710
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  54634767 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 18656614 - 18656710
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| || ||||  ||||| | |||||||| ||||||    
T  18656614 cccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggatcccctctttgatctccaagttttctctc 18656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 39032077 - 39032025
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  39032077 tgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Complemental strand, 16498696 - 16498637
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  16498696 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 27027271 - 27027318
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  27027271 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 40734134 - 40734087
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  40734134 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 40734087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 800850 - 800748
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||||  || |||||  ||||||||||  |  |||||||||||||    
T  800850 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacggcatcacgaaatcgtgtcac 800751  T
Q  289 gat 291  Q
    |||    
T  800750 gat 800748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 4598926 - 4599000
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  4598926 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 4599000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 4601147 - 4601221
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttccca-agatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  4601147 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacgatttg 4601221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 35926055 - 35926108
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35926055 tgaaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaatat 35926108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 37726244 - 37726290
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37726244 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 37726290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 2672476 - 2672427
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2672476 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2672427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 2676632 - 2676583
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  2676632 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 2676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 4599050 - 4599107
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4599050 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 4601271 - 4601328
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  4601271 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 6716142 - 6716085
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  6716142 aaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaaca 6716085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 8477958 - 8478003
Alignment:
Q  290 atttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  8477958 atttctctgttcttccagaccacaaatttgaagccaatgtcaacag 8478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 338
Target Start/End: Complemental strand, 10055862 - 10055801
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagtat 338  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||    
T  10055862 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaacagtat 10055801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 25637193 - 25637120
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  ||||||||||||||||    
T  25637193 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgatttg 25637120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 48438780 - 48438833
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  48438780 tgaaatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaata 48438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 25637069 - 25637013
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||||||    
T  25637069 aatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaaca 25637013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 27038606 - 27038658
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  27038606 tgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 37408093 - 37408045
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  37408093 aatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaa 37408045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 40592304 - 40592252
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  40592304 tgaaatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 326
Target Start/End: Original strand, 1306552 - 1306595
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  1306552 tgtcacgatttctctgttcttccagaccataaatttgaagccaa 1306595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  284 gtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 7782657 - 7782703
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  7782657 tcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaa 7782703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10055986 - 10055912
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10055986 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10055912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10058208 - 10058134
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10058208 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10058134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10060430 - 10060356
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10060430 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10060356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10062652 - 10062578
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10062652 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10062578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10064874 - 10064800
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10064874 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10064800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10067096 - 10067022
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  |||||||||||| |||||||| |||||| |||||||||    
T  10067096 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacgatttg 10067022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10208959 - 10208885
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  |||| |||||||||||||||||  |||||||||||| |||||||| ||||||||||||||||    
T  10208959 agtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacgatttg 10208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 10211159 - 10211085
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacga-tttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||| || |||||||| ||||||||||||||||    
T  10211159 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacgatttg 10211085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 24694708 - 24694654
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaata 328  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||||||||||    
T  24694708 tgaaatcgtatcacgatttctctgttcttccaaaaccacaaatttgaagccaata 24694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 33386192 - 33386146
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||    
T  33386192 tcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaa 33386146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 10058084 - 10058039
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10058084 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 10060306 - 10060261
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10060306 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10060261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 10062528 - 10062483
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10062528 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 10064750 - 10064705
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10064750 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10064705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 10066972 - 10066927
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  10066972 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaag 10066927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 10208835 - 10208778
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  10208835 aaatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 10211035 - 10210978
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||| |||| ||||||    
T  10211035 aaatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 26928245 - 26928164
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   ||||||||||||||| | |||||| ||| |||||||||||  ||||||||  ||||||||||    
T  26928245 acttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaaccagctcacggc 26928164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 27986313 - 27986225
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  27986313 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtt 27986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 322
Target Start/End: Complemental strand, 40735065 - 40735018
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  40735065 tgaaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaag 40735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 800740 - 800698
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||| |||||||||||||||||||||| ||||    
T  800740 tcgtgtcacgatttccctgttcttccagaccacaaattcgaag 800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 23198365 - 23198467
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | | | |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  23198365 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 23198464  T
Q  289 gat 291  Q
    |||    
T  23198465 gat 23198467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 27453526 - 27453572
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  27453526 tcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaa 27453572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 32476014 - 32476064
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32476014 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32476064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 32480872 - 32480922
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  32480872 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaat 32480922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 33386302 - 33386200
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    ||||||| |||||||||   ||||||||||||||| | ||| |||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  289 gat 291  Q
    |||    
T  33386202 gat 33386200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 47923371 - 47923326
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    |||||||||||||||||| || || |||||||||||||||||||||    
T  47923371 tgtcacgatttctctgttttttcaaaccacaaatttgaagccaata 47923326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 3617201 - 3617141
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||||||    
T  3617201 gatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacgatttg 3617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 4386831 - 4386774
Alignment:
Q  8 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  4386831 caaggtgattacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 4386774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23392106 - 23392166
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23392106 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 24695023 - 24694963
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  24695023 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 24694963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 26928456 - 26928396
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  26928456 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 26928396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 36029322 - 36029382
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36029322 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36029382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 40592639 - 40592579
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  40592639 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 40592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 306
Target Start/End: Original strand, 43404484 - 43404515
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttcca 306  Q
    ||||||||||||||||||||||||||||||||    
T  43404484 tgaaatcgtgtcacgatttctctgttcttcca 43404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2672840 - 2672783
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2672840 taaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2672783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2676996 - 2676939
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  2676996 taaatcccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 2676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 23200564 - 23200642
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcac 267  Q
    |||||||||||||||||   ||||||||||||||| | | | |||||| |||||||||||  ||||||||  |||||||    
T  23200564 acttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaaccagctcac 23200642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24968283 - 24968340
Alignment:
Q  1 taaaacccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||| |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  24968283 taaatcccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24968340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 8512398 - 8512450
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8512398 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8512450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 8517278 - 8517330
Alignment:
Q  6 cccaaggtgattacaatgt--ttttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  ||||||||||| |||| ||||||||| |||||    
T  8517278 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 8517330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 28503557 - 28503520
Alignment:
Q  209 aatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  28503557 aatcgtgccacgatttcccaagatcgtgtcacgatttg 28503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 40845221 - 40845266
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||    
T  40845221 aaatcgtgtcacgatttctctgttctcccaaaacataaatttgaag 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 21711454 - 21711511
Alignment:
Q  8 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    ||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  21711454 caaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 21711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 23410529 - 23410586
Alignment:
Q  8 caaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    ||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  23410529 caaggtgtttacaatgtttt--ccaacccaagagaacctcactacaaagacactcaaccc 23410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 32143552 - 32143629
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttg 84  Q
    |||||||||| ||||||||||||  |||||||||||||   || | |||||||||||||||||    |||||||||||||    
T  32143552 acccaaggtgtttacaatgtttt--ccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctttg 32143629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 47923761 - 47923704
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 64  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  47923761 acccaaggtgtttacaatgttt--cccaacccaagagattctcactacaaagacactcaa 47923704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 130 - 335
Target Start/End: Complemental strand, 34777 - 34553
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34777 tccctagatcgtgtcacgatctgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 34678  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttg-------------------aaatcgtgtcacgatttctctgttcttccagacc 310  Q
    |||||||||||||||||||||| ||||||  | || |||||||||||                   ||||||||||||||||||||||||||||||||||    
T  34677 gatcgtgccacgatttggcgtcatgcaaacaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 34578  T
Q  311 acaaatttgaagccaatatcaacag 335  Q
    |||||||||||||||||||||||||    
T  34577 acaaatttgaagccaatatcaacag 34553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34971 - 34846
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34971 taaaacccaaggtgattacaatgttttcccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 34872  T
Q  101 tcaaagctcatacaagctctcttaag 126  Q
    || |||||||||||||||||||||||    
T  34871 tctaagctcatacaagctctcttaag 34846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 137 - 334
Target Start/End: Original strand, 12406641 - 12406857
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406641 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 12406740  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatt 317  Q
    ||||||||||||||| |||||| |||||||||||||||||||||                   |||||||||||||||||||||||||||||||||||||    
T  12406741 ccacgatttggcgtcttgcaaactagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 12406840  T
Q  318 tgaagccaatatcaaca 334  Q
    |||||||||||||||||    
T  12406841 tgaagccaatatcaaca 12406857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 130 - 334
Target Start/End: Original strand, 4873498 - 4873721
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  4873498 tccctagatcgtgtcacgatttgcaacggacccaaggaagacaagtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaa 4873597  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaat-------------------cgtgtcacgatttctctgttcttccagacc 310  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||                   ||||||||||||||||||||||||||||||    
T  4873598 gatcgtgccacgatttggcgtcctgcaaactatcttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagacc 4873697  T
Q  311 acaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||    
T  4873698 acaaatttgaagccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12397087 - 12397216
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12397087 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 12397186  T
Q  101 tcaaagctcatacaagctctcttaagttct 130  Q
    || |||||||||||||||||||||||||||    
T  12397187 tctaagctcatacaagctctcttaagttct 12397216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 24024042 - 24023881
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024042 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 24023943  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||    
T  24023942 gatcgtgccacgatttggcgtcctgcaaactagctctctgccacttgaaatcgtgccacgat 24023881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24024236 - 24024115
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24024236 taaaacccacggtgattacaatgtttttccaaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 24024137  T
Q  101 tcaaagctcatacaagctctct 122  Q
    ||||||||||||||||||||||    
T  24024136 tcaaagctcatacaagctctct 24024115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 31109294 - 31109132
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  31109294 tccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 31109195  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa-gtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||||||||||  ||||| || | |||||||||||||| ||||||    
T  31109194 gatcgtgccacgatttggcgtcctgcaaacttagcttacaggcacttgaaatcgtgccacgat 31109132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 4873310 - 4873433
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaaag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  4873310 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgttatccaagttctctctctaag 4873409  T
Q  107 ctcatacaagctctcttaagttct 130  Q
    ||| | ||||||||||||||||||    
T  4873410 ctcttccaagctctcttaagttct 4873433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 31109493 - 31109369
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccat-tggttccctcctttgctatccaag-ttctc 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||    
T  31109493 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccatatggttccctcctttgctatccaagtttttc 31109394  T
Q  99 tctc-aaagctcatacaagctctct 122  Q
    ||||  |||||||||||||||||||    
T  31109393 tctcttaagctcatacaagctctct 31109369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 2058425 - 2058604
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  2058425 agtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 2058524  T
Q  273 ct-------tg-----------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||       ||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058525 ctcaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 2058202 - 2058320
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||||||| |    
T  2058202 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagttctctctcta 2058301  T
Q  105 agctcatacaagctctctt 123  Q
    ||||| | |||||||||||    
T  2058302 agctcttccaagctctctt 2058320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 173 - 334
Target Start/End: Original strand, 21640243 - 21640423
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||      
T  21640243 agtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcac 21640342  T
Q  273 cttgaaat-------------------cgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    || |||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640343 ctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 20357195 - 20357090
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  20357195 gatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcaccttgaaatcgtgt 20357096  T
Q  286 cacgat 291  Q
    ||||||    
T  20357095 cacgat 20357090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 20357410 - 20357306
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctcaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | |    
T  20357410 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatccaagttctctcacta 20357311  T
Q  105 agctc 109  Q
    |||||    
T  20357310 agctc 20357306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 1533307 - 1533190
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  1533307 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 1533208  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  1533207 aagctcttccaagctctc 1533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 137 - 291
Target Start/End: Original strand, 12397289 - 12397430
Alignment:
Q  137 atcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtg 236  Q
    ||||||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  12397289 atcgtgtcacgatttgcaacggacccaaggtagacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcat- 12397387  T
Q  237 ccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
                | |||||||| ||||||||||||||||||||||||||||||||    
T  12397388 ------------ggcctgcaaactagctcacggccacttgaaatcgtgtcacgat 12397430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12406507 - 12406585
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 79  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12406507 taaaagccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctc 12406585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 24265900 - 24265772
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  24265900 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 24265801  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  24265800 gatcgtgccacgattttgcttccagcaaa 24265772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 24789607 - 24789489
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||      
T  24789607 agtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgatttggcaccctgcaaactagctcacggcac 24789508  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  24789507 cacgaaatcgtgtcacgat 24789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 16880437 - 16880565
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  16880437 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaa 16880536  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    ||||||| |||||||| || ||| |||||    
T  16880537 gatcgtgacacgattttgcttccagcaaa 16880565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 16885292 - 16885420
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||||||| ||| || ||||||| ||||||||||||||||||||||| |||||||||    
T  16885292 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaa 16885391  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    ||||||| |||||||| || ||| |||||    
T  16885392 gatcgtgacacgattttgcttccagcaaa 16885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 21811962 - 21811834
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||| |||||||| ||| ||||| ||||| ||| |||  ||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  21811962 tcccaagatcgtgacacaatctgcaacggtctccaggttgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaa 21811863  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| ||  ||||||||    
T  21811862 gatcgtgccacgattttgcaccctgcaaa 21811834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 20357085 - 20357028
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357085 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 21640039 - 21640156
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  21640039 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 21640138  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  21640139 aagctcttccaagctctc 21640156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 24261001 - 24260929
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 245  Q
    |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24261001 agtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattt 24260929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 1533084 - 1532966
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||| |||      
T  1533084 agtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaactagctcatggcac 1532985  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    ||  ||||| |||||||||    
T  1532984 ctcaaaatcatgtcacgat 1532966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 12397435 - 12397492
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12397435 aaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 21646475 - 21646580
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    ||||||||||||||||||||   |||||||||||||||| ||||||||||| |||||||||||  ||||||||  ||||||||||  |  ||||||||||    
T  21646475 gatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgt 21646574  T
Q  286 cacgat 291  Q
    ||||||    
T  21646575 cacgat 21646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 278 - 334
Target Start/End: Complemental strand, 24023875 - 24023819
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24023875 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagctaatatcaaca 24023819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 25767381 - 25767483
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 25767480  T
Q  289 gat 291  Q
    |||    
T  25767481 gat 25767483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 43504556 - 43504658
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||||| ||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  43504556 acttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 43504655  T
Q  289 gat 291  Q
    |||    
T  43504656 gat 43504658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 18408993 - 18409110
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||| ||| |||||||||     
T  18408993 acccaaggtgtttacaatgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctct 18409092  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  18409093 aagctcttccaagctctc 18409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 18413869 - 18413986
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||| |||||||||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  18413869 acccaaggtgtttacattgtttttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 18413968  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  18413969 aagctcttccaagctctc 18413986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 18414110 - 18414191
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  18414110 acttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaaccagctcacggc 18414191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 31109127 - 31109070
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31109127 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 21646237 - 21646353
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    ||| |||||||||  ||| ||| |||||||||     
T  21646237 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctct 21646336  T
Q  104 aagctcatacaagctct 120  Q
    |||||| | ||||||||    
T  21646337 aagctcttccaagctct 21646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 21983807 - 21983859
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21983807 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 1532939 - 1532884
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagcc-aatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1532939 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 79953 - 80007
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  79953 tgaaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaatat 80007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 20343680 - 20343562
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  |||||||||||||||||||||   |||||||||||||||||||  |||||| |||||||| || ||| ||||  |||||||||||      
T  20343680 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcatccggcaacctagctcacggcac 20343581  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |  ||||||||||||||||    
T  20343580 cccgaaatcgtgtcacgat 20343562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 39730988 - 39730942
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  39730988 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 39730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 48408563 - 48408461
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||| |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  48408563 acttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 48408464  T
Q  289 gat 291  Q
    |||    
T  48408463 gat 48408461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 1562530 - 1562587
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1562530 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 1562587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 6592741 - 6592814
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6592741 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6592814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 6592864 - 6592921
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  6592864 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 6594957 - 6595030
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  6594957 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacgatttg 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 32060831 - 32060888
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  32060831 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 32060888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 21989471 - 21989522
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  21989471 tgaaatcttgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21989522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 18409234 - 18409336
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    ||||||| |||||||||  |||||||||||||||||| |||||||||| || ||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  18409234 acttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaaccagctcacggcaccacaaaatcgtgtcac 18409333  T
Q  289 gat 291  Q
    |||    
T  18409334 gat 18409336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 18414220 - 18414266
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  18414220 tcgtgtcacgatttctctgttcttccagaccataaatttgaagccaa 18414266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 20343556 - 20343498
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 336  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  20343556 aatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacagt 20343498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 39731098 - 39730996
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  39731098 acttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 39730999  T
Q  289 gat 291  Q
    |||    
T  39730998 gat 39730996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 48408453 - 48408407
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  48408453 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 48408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 6595080 - 6595137
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||    
T  6595080 aaatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaaca 6595137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 21811796 - 21811747
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  21811796 aaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaa 21811747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 32060708 - 32060781
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||  ||||||||||||||| || | ||||||||||||||||    
T  32060708 agtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacgatttg 32060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 47264209 - 47264258
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  47264209 aaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaa 47264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 21646590 - 21646634
Alignment:
Q  282 gtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  21646590 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaa 21646634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 323
Target Start/End: Original strand, 43504666 - 43504709
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagc 323  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43504666 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagc 43504709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 335
Target Start/End: Original strand, 18392723 - 18392781
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    |||||||| ||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  18392723 aaatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacag 18392781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 18409344 - 18409390
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||    
T  18409344 tcgtgttacgatttctctgttcttccagaacacaaatttgaagccaa 18409390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 2479902 - 2479951
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||| |||||||||||||| || |||||||||||||||||||    
T  2479902 aaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaa 2479951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 44847677 - 44847628
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||||    
T  44847677 aaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaa 44847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 46515862 - 46515809
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttcc-agaccacaaatttgaagccaat 327  Q
    ||||||||||||||||||||||||||||||| | |||| |||||||||||||||    
T  46515862 tgaaatcgtgtcacgatttctctgttcttccaaaaccataaatttgaagccaat 46515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 1562407 - 1562479
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattt 245  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| ||||||||    
T  1562407 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacgattt 1562479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 24260878 - 24260819
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacagt 336  Q
    |||||||| ||||||| ||||||||| ||| ||||||||||||||||||||  |||||||    
T  24260878 aaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattccaacagt 24260819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||| |||| ||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 49092238 - 49092282
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaa 321  Q
    |||||||||||| ||||||||||||||||| || |||||||||||    
T  49092238 aaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 2479565 - 2479653
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | | |||||||||||||||    |||||||||||||  |||||||||    
T  2479565 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttgtaatccaagtt 2479653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 2580619 - 2580706
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    ||| |||||||||| |||||||||    
T  2580619 acccaaggtgtttacaatgtttt--ccaacccaagagaacctcac-acaaagacactcaaccctaaagttacctcctttgcaatccaagtt 2580706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 20284318 - 20284378
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  20284318 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 20284378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 21812143 - 21812092
Alignment:
Q  6 cccaaggtgattacaatgttttt-cccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||| |||||    
T  21812143 cccaaggtgattacaatgtttttccccaacctaagaaacactctcatcaaag 21812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 23402881 - 23402821
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  23402881 acccaaggtgtttacaatgttt--cccaacccaagagaacctcactacaaagacactcaaccc 23402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 4796536 - 4796477
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacc 66  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | ||||||||||||||||    
T  4796536 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaacc 4796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 46516173 - 46516070
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||  |||||| |||||||  ||| | |||||||||||||||||    ||| |||||||||  ||||||| |||||||||     
T  46516173 acccaaggtgtttacaatgttt--cccaactcaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 46516076  T
Q  104 aagctc 109  Q
    ||||||    
T  46516075 aagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 18389164 - 18389233
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  18389164 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18389233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 18392600 - 18392669
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 242  Q
    |||||||| ||  |||||||||||||||||||||   ||||||||||||||| || | |||||| |||||    
T  18392600 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18392669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 24266106 - 24266054
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  24266106 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 24266054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 44847991 - 44847933
Alignment:
Q  7 ccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  44847991 ccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 44847933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 2647230 - 2647179
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||| ||||||||||||||| || | |||| |||||||||||||||    
T  2647230 tgaaatcgtgttacgatttctctgttc-tcaaaaccataaatttgaagccaat 2647179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21989137 - 21989194
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaa 64  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||||||||||    
T  21989137 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaa 21989194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 9e-65; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 130 - 291
Target Start/End: Complemental strand, 39811700 - 39811539
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  39811700 tccctagatcgtgtcacgatctgcaacggccccaaggcagacaagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 39811601  T
Q  230 gatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    ||||||||||||||||||||||||||||| | ||| |||| |||||||||||||||||||||    
T  39811600 gatcgtgccacgatttggcgtcctgcaaacttgcttacggtcacttgaaatcgtgtcacgat 39811539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 173 - 334
Target Start/End: Complemental strand, 11098567 - 11098387
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  11098567 agtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 11098468  T
Q  273 cttgaaatcgtg-------------------tcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098467 cttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 173 - 335
Target Start/End: Original strand, 14291945 - 14292126
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  14291945 agtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcacggcac 14292044  T
Q  273 cttg-------------------aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 335  Q
    || |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14292045 ctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacag 14292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 39811898 - 39811775
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatccaagttctct 99  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39811898 taaaacccaaggtgattacaatgtttttctcaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagttctct 39811799  T
Q  100 ct-caaagctcatacaagctctct 122  Q
     | |||||||||||||||||||||    
T  39811798 gtacaaagctcatacaagctctct 39811775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 173 - 291
Target Start/End: Complemental strand, 9296042 - 9295924
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggcca 272  Q
    |||||||| ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||      
T  9296042 agtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcatcctgcaaactagctcacggcac 9295943  T
Q  273 cttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||    
T  9295942 cttgaaatcgtgtcacgat 9295924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 11098790 - 11098674
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||     
T  11098790 acccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 11098691  T
Q  104 aagctcatacaagctct 120  Q
    |||||| | ||||||||    
T  11098690 aagctcttccaagctct 11098674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 14291722 - 14291840
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||||||  ||||||| |||||||||     
T  14291722 acccaaggtgattacaatgtttttcccaacccaagagacactatctacaaagacgctcaaccctttggttccctcctttgtaatccaagtttctctctct 14291821  T
Q  104 aagctcatacaagctctct 122  Q
    |||||| | ||||||||||    
T  14291822 aagctcttccaagctctct 14291840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 9296265 - 9296148
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||  ||||||| || ||||||     
T  9296265 acccaaggtgattacaatgtttttcccaacccaatagacactttctacaaagacactcaaccctttggttccctcctttgtaatccaagtttttctctct 9296166  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  9296165 aagctcttccaagctctc 9296148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 19344786 - 19344914
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    |||||||||||||||| |||||| ||||| | | |||  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19344786 tccctagatcgtgtcatgatctgcaacggtccccaggttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 19344885  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||| ||||| || ||| |||||    
T  19344886 gatcgtgccatgattttgcttccagcaaa 19344914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 19349644 - 19349772
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| |   |||  ||| |||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||    
T  19349644 tccctagatcgtgtcacgatctgcaacggtcctcaggttgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaa 19349743  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  19349744 gatcgtgccacgattttgcttccagcaaa 19349772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 3492212 - 3492314
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 3492311  T
Q  289 gat 291  Q
    |||    
T  3492312 gat 3492314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 9295919 - 9295862
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9295919 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9295862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 189 - 326
Target Start/End: Complemental strand, 28258815 - 28258678
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    ||||||| |||||||||   ||||||||||||||||| ||| || ||||||||||||| |  ||||||||  ||||||||||      ||||||||||||    
T  28258815 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 28258716  T
Q  289 gatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  28258715 gatttctctgtttttccaaaccacaaatttgaagccaa 28258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 32247295 - 32247352
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32247295 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 32247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 39811534 - 39811477
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39811534 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 39811477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 44310528 - 44310471
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310528 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 30833086 - 30832984
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  30833086 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 30832987  T
Q  289 gat 291  Q
    |||    
T  30832986 gat 30832984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 32247150 - 32247244
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgattt 224  Q
    ||||||||||||||||||||||| ||||| | | |||  ||| |||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32247150 tccctagatcgtgtcacgatctgcaacggtccccaggttgaccagtctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 25409860 - 25409976
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||| ||  ||||||| |||||||||     
T  25409860 acccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagtgttccctcctctgtaatccaagtttctctctct 25409959  T
Q  104 aagctcatacaagctct 120  Q
    |||||| | ||||||||    
T  25409960 aagctcttccaagctct 25409976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 4484758 - 4484860
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| |  ||||||||| |||||||||||  |||||||| |||||||||||  | ||||||||||||||    
T  4484758 acttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcatgaaatcgtgtcac 4484857  T
Q  289 gat 291  Q
    |||    
T  4484858 gat 4484860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 8389683 - 8389629
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8389683 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatat 8389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 25410098 - 25410203
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||  ||||||||  | ||||||||  |   |||||||||    
T  25410098 gatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccatctcacggcatcacaaaatcgtgt 25410197  T
Q  286 cacgat 291  Q
    ||||||    
T  25410198 cacgat 25410203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 10706785 - 10706731
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  10706785 tgaaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaatat 10706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 25410211 - 25410257
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25410211 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 25410257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 32289203 - 32289157
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32289203 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 32289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 12647787 - 12647860
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  |||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  12647787 agtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacgatttg 12647860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 12647910 - 12647967
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12647910 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 21630509 - 21630562
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  21630509 tgaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaata 21630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 39483441 - 39483494
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaata 328  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  39483441 tgaaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaata 39483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 33528157 - 33528105
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33528157 tgaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 283 - 326
Target Start/End: Complemental strand, 30832973 - 30832930
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30832973 tgtcacgatttctctgttcttccagaccacaaatttgaagccaa 30832930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 4484868 - 4484910
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4484868 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4484910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 23078004 - 23077950
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  23078004 tgaaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaatat 23077950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 36757475 - 36757425
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36757475 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 40739402 - 40739448
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40739402 tcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaa 40739448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 32246963 - 32247064
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctc 100  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||| || ||||| ||  |||  ||||| | |||||||| ||||    
T  32246963 taaatcccaaggtgattacaatgtttttcccaacctaagaaacactctcatcaaaggcacacaccccataggaccccctctttgatctccaagttttctc 32247062  T
Q  101 tc 102  Q
    ||    
T  32247063 tc 32247064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 3491981 - 3492085
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    |||||||||| ||||||||||||| |||||||||||||  ||| | |||||||||||||||||     ||||||||||||  ||||||| |||||||||     
T  3491981 acccaaggtgtttacaatgttttttccaacccaagagatcctcactacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctct 3492080  T
Q  104 aagct 108  Q
    |||||    
T  3492081 aagct 3492085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  283 tgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 6266439 - 6266337
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||| ||||||   ||||||||||||||||||||  |||||| |||||||||||  ||||||||  ||||||||||  |  ||||| |||||||    
T  6266439 acttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaattgtgtcac 6266340  T
Q  289 gat 291  Q
    |||    
T  6266339 gat 6266337  T

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Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 32289313 - 32289211
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||| | |||||||||| || ||||||||  ||||||||  ||||||||||  |   ||||||||||||    
T  32289313 acttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 32289214  T
Q  289 gat 291  Q
    |||    
T  32289213 gat 32289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 40739063 - 40739151
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  40739063 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatccaagtt 40739151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 6266329 - 6266287
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  6266329 tcgtgtcacgatttccatgttcttccagaccacaaatttgaag 6266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 13569894 - 13569948
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatat 329  Q
    ||||||| ||||| ||||| ||||||||| || ||||||||||||||||||||||    
T  13569894 tgaaatcatgtcatgatttttctgttctttcaaaccacaaatttgaagccaatat 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 19344952 - 19345002
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||||||| ||||||||||||||||||||    
T  19344952 aaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaat 19345002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 40739292 - 40739373
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggc 270  Q
    |||||||||||||||||   ||| ||||||| ||| | |||||||||| |||||||||||  ||||||||  ||||||||||    
T  40739292 acttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaaccagctcacggc 40739373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 3492332 - 3492368
Alignment:
Q  290 atttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3492332 atttctctgttctttcagaccacaaatttgaagccaa 3492368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 23078339 - 23078251
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  |||   ||||||||||||||||||   ||| |||||||||  |||||||||    
T  23078339 acccaaggtgtttacaatgttt--cccaacccaagagattctcatcacaaagacactcaacccaaaagttacctcctttgtaatccaagtt 23078251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36757630 - 36757570
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    
T  36757630 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccc 36757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 39483162 - 39483222
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| ||||||| |||  ||||||||||||||  ||| |||||||||||||||||||    
T  39483162 acccaaggtgtttacaatattt--cccaacccaagagatcctcacaacaaagacactcaaccc 39483222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 17865434 - 17865529
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||| ||||||||  |||||||||||||||||   || | |||||||||||||||||    ||| |||||||||  ||||||||||| ||||    
T  17865434 acccaaggtgtttacaatg--tttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttgtaatccaagttctgtctc 17865529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 19349819 - 19349860
Alignment:
Q  286 cacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||| ||||||||||||| |||||||||||||| |||||    
T  19349819 cacgattcctctgttcttccaaaccacaaatttgaaaccaat 19349860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 21630174 - 21630232
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaac 65  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||    
T  21630174 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaac 21630232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 20522471 - 20522511
Alignment:
Q  27 ttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||||||||| |||| | |||||||||||||||||    
T  20522471 ttcccaacccaagagatactcactacaaagacactcaaccc 20522511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 29867840 - 29867780
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca 68  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||| | ||||||| |||||||||    
T  29867840 acccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccca 29867780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 41586419 - 41586358
Alignment:
Q  5 acccaaggtgattacaa-tgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| |||||| ||||||  |||||||||||||  |||||| ||||||||||||||||    
T  41586419 acccaaggtgtttacaactgtttt--ccaacccaagagaagctctcaccaaagacactcaaccc 41586358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 116; Significance: 8e-59; HSPs: 4)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 3558 - 3399
Alignment:
Q  132 cctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 231  Q
    ||||||||||||||||||||| ||||| | | |||  ||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  3558 cctagatcgtgtcacgatctgcaacggtccccaggttgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaga 3459  T
Q  232 tcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgat 291  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  3458 tcgtgccacgatttggcgtccttcaaactagctcacggccacttgaaatcgtgtcacgat 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3758 - 3627
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccca-ttggttccctcctttgctatccaagttctct 99  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3758 taaaacccaaggtgattacaatgtttttcctaacctaagagacactctcaacaaagacactcaacccatttggttccctcctttgctatccaagttctct 3659  T
Q  100 ct-caaagctcatacaagctctcttaagttct 130  Q
    || |||||||||||||| ||||||||||||||    
T  3658 ctacaaagctcatacaatctctcttaagttct 3627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 3394 - 3337
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3394 aaatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaaca 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9553 - 9514
Alignment:
Q  1 taaaacccaaggtgattacaatgtttttcccaacccaaga 40  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  9553 taaaacccaaggtgattacaatgtttttcccaacctaaga 9514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 174 - 291
Target Start/End: Complemental strand, 22119 - 22002
Alignment:
Q  174 gtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccac 273  Q
    ||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  |    
T  22119 gtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaactagctcacggcacc 22020  T
Q  274 ttgaaatcgtgtcacgat 291  Q
    | ||||||||||||||||    
T  22019 tcgaaatcgtgtcacgat 22002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 326
Target Start/End: Complemental strand, 21986 - 21948
Alignment:
Q  288 cgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  21986 cgatttctctgttcttccagaccacaaatttgaaaccaa 21948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 176673 - 176545
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||| ||| |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  176673 tccctagatcgtgtcacgatctgcaacggacccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 176574  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  176573 gatcgtgccacgattttgcttccagcaaa 176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 176881 - 176829
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  176881 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 176829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Original strand, 722 - 850
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||||  ||| |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  722 tccctagatcgtgtcacgatctgcaacggaaccaaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 821  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  822 gatcgtgccacgattttgcatccagcaaa 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 888 - 945
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  888 aaatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaaca 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 542 - 638
Alignment:
Q  6 cccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagttctctctc 102  Q
    |||||||||||||||||||||||||||||| |||| || |||||| ||||| ||| || ||||| || ||||  ||||| | |||||| | ||||||    
T  542 cccaaggtgattacaatgtttttcccaacctaagaaactctctcatcaaaggcacacaccccataggatcccctctttgatctccaagatttctctc 638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 1962 - 1834
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  1962 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 1863  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  1862 gatcgtgccacgattttgcttccagcaaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 1796 - 1746
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  1796 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 1746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 2155 - 2103
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  2155 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 148667 - 148539
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | |||||  ||| |||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||    
T  148667 tccctagatcgtgtcacgatctgcaacggtcccaaggttgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 148568  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  148567 gatcgtgccacgattttgcttccagcaaa 148539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 148501 - 148451
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||    
T  148501 aaatcgtgacacgattcctctgttcttccaaaccactaatttgaagtcaat 148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 148860 - 148808
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  148860 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 73; Significance: 4e-33; HSPs: 5)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 130 - 258
Target Start/End: Complemental strand, 14007 - 13879
Alignment:
Q  130 tccctagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 229  Q
    ||||||||||||||||||||||| ||||| | | | |  ||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  14007 tccctagatcgtgtcacgatctgcaacggtccccaagttgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 13908  T
Q  230 gatcgtgccacgatttggcgtcctgcaaa 258  Q
    |||||||||||||||| || ||| |||||    
T  13907 gatcgtgccacgattttgcttccagcaaa 13879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 258
Target Start/End: Complemental strand, 18883 - 18759
Alignment:
Q  134 tagatcgtgtcacgatctgtaacggactcaaggcagacaagtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatc 233  Q
    |||||||||||||||| || ||||| | | |||  ||| |||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18883 tagatcgtgtcacgatttgcaacggtccccaggatgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatc 18784  T
Q  234 gtgccacgatttggcgtcctgcaaa 258  Q
    ||| |||||||| || ||| |||||    
T  18783 gtggcacgattttgcttccagcaaa 18759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 18721 - 18671
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||| | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  18721 aaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaat 18671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 14213 - 14161
Alignment:
Q  6 cccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    ||||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  14213 cccaaggtgattacaatgttgttttcccaacctaagatacactctcatcaaag 14161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 19068 - 19017
Alignment:
Q  7 ccaaggtgattacaatgtt--tttcccaacccaagagacactctcaacaaag 56  Q
    |||||||||||||||||||  |||||||||| |||| ||||||||| |||||    
T  19068 ccaaggtgattacaatgttgttttcccaacctaagaaacactctcatcaaag 19017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 17818 - 17701
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  17818 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 17719  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  17718 aagctcttccaagctctc 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 23911 - 23794
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaag-ttctctctca 103  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    |||||||||||||  ||||||| |||||||||     
T  23911 acccaaggtgattacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctct 23812  T
Q  104 aagctcatacaagctctc 121  Q
    |||||| | |||||||||    
T  23811 aagctcttccaagctctc 23794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 17599 - 17494
Alignment:
Q  186 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgt 285  Q
    ||||||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||  ||||||||  ||||||||||  |  ||||||||||    
T  17599 gatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgt 17500  T
Q  286 cacgat 291  Q
    ||||||    
T  17499 cacgat 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 17486 - 17440
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17486 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 1766 - 1709
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1766 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 11589 - 11690
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||| |||||| |||||||||||  ||||||||  ||||||||||  | ||||||||||||||    
T  11589 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcgtgtcacgatttggcaccctgcaaaccagctcacggcatcatgaaatcgtgtcac 11687  T
Q  289 gat 291  Q
    |||    
T  11688 gat 11690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 9253 - 9299
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9253 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 9299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 9144 - 9245
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    |||||||||||||||||   ||||||||||||||||||||| ||| || |||||||||||  ||||||||  ||||||||||  |  |||||||||||||    
T  9144 acttaacgagcaagtttgcaaatcgtgtcacgatttcccaa-atcatgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 9242  T
Q  289 gat 291  Q
    |||    
T  9243 gat 9245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 11698 - 11744
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  11698 tcgtgtcacgatttctctgttcttccagaccacaattttgaagccaa 11744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 4130 - 4203
Alignment:
Q  173 agtccttaccagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  4130 agtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 4203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 4253 - 4310
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4253 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 326
Target Start/End: Original strand, 45678 - 45795
Alignment:
Q  209 aatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccaga 308  Q
    ||||||||||||||||| ||  |||||||||||||||| |  ||||||||  |||||||| |      |||| ||||||||||||||||||||||||| |    
T  45678 aatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaatcagctcacgacattacaaaattgtgtcacgatttctctgttcttccaaa 45777  T
Q  309 ccacaaatttgaagccaa 326  Q
    ||||||||||||||||||    
T  45778 ccacaaatttgaagccaa 45795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 8e-19; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 6250 - 6302
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6250 tgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 3058 - 3110
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaat 327  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3058 tgaaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 149599 - 149658
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    ||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  149599 tgaaatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 132809 - 132765
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  132809 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 132765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 133147 - 133059
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | ||||||| |||||||||    |||||||||||||  |||||||||    
T  133147 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttgtaatccaagtt 133059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 3019 - 3078
Alignment:
Q  187 atacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  3019 atacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgatttg 3078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 3128 - 3185
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  3128 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 647 - 545
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcac 288  Q
    ||||||||||||| |||   ||||||||||||||| | |||||||||| |||||||||||  |||||||| |||||||||||  |  |||||||||||||    
T  647 acttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaactagctcacggcatcacgaaatcgtgtcac 548  T
Q  289 gat 291  Q
    |||    
T  547 gat 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 7966 - 7920
Alignment:
Q  280 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7966 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaa 7920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8285 - 8197
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaacccattggttccctcctttgctatccaagtt 95  Q
    |||||||||| |||||||||||  ||||||||||||||  ||| | |||||||||||||||||    |||||||||||||  |||||||||    
T  8285 acccaaggtgtttacaatgttt--cccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatccaagtt 8197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 327
Target Start/End: Complemental strand, 36446 - 36332
Alignment:
Q  213 gtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaagtagctcacggccacttgaaatcgtgtcacgatttctctgttcttccagaccac 312  Q
    |||||||| |||| ||| |||||||||||||||| |  ||||||||  |||||||| |      ||||||| ||| |||||||||||||||||| |||||    
T  36446 gtgtcacgttttcacaaaatcgtgccacgatttgacaccctgcaaaccagctcacgacattacaaaatcgtatcatgatttctctgttcttccaaaccac 36347  T
Q  313 aaatttgaagccaat 327  Q
    |||||||||||||||    
T  36346 aaatttgaagccaat 36332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 43491 - 43443
Alignment:
Q  278 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaa 326  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  43491 aatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaa 43443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36700 - 36640
Alignment:
Q  5 acccaaggtgattacaatgtttttcccaacccaagagacactctcaacaaagacactcaaccc 67  Q
    |||||||||| ||||||||||||  |||||||||||||  ||| | |||||||||||||||||    
T  36700 acccaaggtgtttacaatgtttt--ccaacccaagagatcctcactacaaagacactcaaccc 36640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 5916 - 5859
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 334  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5916 aaatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 86151 - 86206
Alignment:
Q  275 tgaaatcgtgtcacgatttctctgttcttccagaccac-aaatttgaagccaatat 329  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  86151 tgaaatcgtgtcacgatttctctattcttccaaaccacaaaatttgaagccaatat 86206  T

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Target: scaffold0510 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 1141 - 1096
Alignment:
Q  277 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 322  Q
    ||||||||||||||||| ||||||||| || |||||||||||||||    
T  1141 aaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

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Target: scaffold0510; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 1248 - 1191
Alignment:
Q  189 acttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttg 246  Q
    ||||||| |||||||||   ||||||||||||||||| ||| ||||| ||||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttg 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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