View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13926_high_1 (Length: 904)

Name: NF13926_high_1
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13926_high_1
NF13926_high_1
[»] chr7 (35 HSPs)
chr7 (19-773)||(22831411-22832182)
chr7 (19-351)||(22805689-22806027)
chr7 (19-352)||(22840432-22840772)
chr7 (19-318)||(22815407-22815715)
chr7 (19-245)||(22810024-22810252)
chr7 (19-261)||(22858799-22859041)
chr7 (20-304)||(22842545-22842843)
chr7 (19-285)||(22876296-22876567)
chr7 (19-216)||(22889672-22889868)
chr7 (18-210)||(22898642-22898836)
chr7 (19-288)||(22894324-22894606)
chr7 (769-904)||(22835144-22835279)
chr7 (132-351)||(22885988-22886210)
chr7 (354-503)||(22810396-22810543)
chr7 (82-288)||(22873589-22873794)
chr7 (19-245)||(22880944-22881158)
chr7 (177-288)||(22841175-22841286)
chr7 (384-513)||(22859131-22859261)
chr7 (532-639)||(22816243-22816350)
chr7 (384-504)||(22806079-22806199)
chr7 (541-635)||(22886423-22886524)
chr7 (384-500)||(22842942-22843059)
chr7 (533-639)||(22810585-22810690)
chr7 (448-510)||(22894792-22894854)
chr7 (455-510)||(22841490-22841545)
chr7 (532-587)||(22843080-22843135)
chr7 (543-623)||(22843134-22843214)
chr7 (767-904)||(22886610-22886747)
chr7 (400-511)||(22886284-22886396)
chr7 (19-95)||(22914048-22914124)
chr7 (448-513)||(22816032-22816095)
chr7 (532-589)||(22874013-22874070)
chr7 (49-81)||(22885937-22885969)
chr7 (450-510)||(22899055-22899113)
chr7 (287-338)||(22810292-22810343)
[»] chr1 (4 HSPs)
chr1 (19-339)||(21150029-21150334)
chr1 (418-509)||(21149819-21149910)
chr1 (794-830)||(35877111-35877147)
chr1 (762-831)||(897241-897310)
[»] chr4 (1 HSPs)
chr4 (753-834)||(52934488-52934570)
[»] scaffold0533 (1 HSPs)
scaffold0533 (768-858)||(3152-3242)
[»] chr8 (1 HSPs)
chr8 (694-736)||(42447348-42447390)
[»] chr5 (1 HSPs)
chr5 (688-730)||(4523922-4523964)


Alignment Details
Target: chr7 (Bit Score: 587; Significance: 0; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 587; E-Value: 0
Query Start/End: Original strand, 19 - 773
Target Start/End: Original strand, 22831411 - 22832182
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||| |||||| || ||||    
T  22831411 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgctgtcttcacttgctacaaatg 22831510  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttataa 218  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22831511 taacaagaaaaaacaacataaacacaagcttgaggaacatgattatagtttgtgaatgaataatgcttgtgtagttctgttcggtgtttattatttataa 22831610  T
Q  219 gattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaacctagctacgaattattactgaaagaaacatcac 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22831611 gattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatgtcctggaacctagctacgaattattactgaaagaaacatcac 22831710  T
Q  319 ttgacaaggtttcttaaattgccttatcatctg------------------acatgaatgtgttacacatttgaataaatgagcacattcgaagcacaaa 400  Q
    ||||||| |||||||||||||||||||||||||                  | || ||||||||||||||||||||||||||||||||| ||| |||||     
T  22831711 ttgacaaagtttcttaaattgccttatcatctgagatatttagtttagtgaaaattaatgtgttacacatttgaataaatgagcacatttgaaccacaat 22831810  T
Q  401 ttttctttccatctgtagtagtgggggaatatttttcaacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgt 500  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831811 ttttctttccatctgtagttgtgggggaatatttttcaacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgt 22831910  T
Q  501 ctaaattctt-aaagtgnnnnnnnnnnnnccttttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaaatgatgaatgaa 599  Q
    |||||||||| ||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22831911 ctaaattcttaaaagtgttttttttttt--cttttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaaatgatgaatgaa 22832008  T
Q  600 tatgtggtggaaggataaaaagatatatgtttgttttgacatagtcacctcatctctaaatataagacgatttataagagaaaatgtatgtccttaaata 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  22832009 tatgtggtggaaggataaaaagatatatgtttgttttgacatagtcacctcatctctaaatataagacgatttataaaagaaaatgtatgtccttaaata 22832108  T
Q  700 taagactcactacaaattactaaatgcatttgttatttttcttcttctttctaatatacccctattaatactat 773  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22832109 caagactcactacaaattactaaatgcatttgttatttttcttcttctttctaatatacccctattaatactat 22832182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 19 - 351
Target Start/End: Original strand, 22805689 - 22806027
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||    
T  22805689 agtatgccatctgaggttaactcagcaaaaccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatcttcacttgctactaatg 22805788  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttataa 218  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  22805789 taacatgaaaaaacaacataaacacaagtttgaggaacatgattatagtttgagaatgaataatgcttgtgtagttctgttcggtgtttattatttataa 22805888  T
Q  219 gattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaaccta-----gctacgaattattactgaaagaaac 313  Q
    |||||||||| |||||||| |||||||||| | |||||||||| |||| |||||||| ||||||||| ||     ||||||||| ||| || ||||||||    
T  22805889 gattttgtcctaagtgaagaaaaaattgcaagtctaatttgggtcctagtaagaaatgtcctggaacataacttagctacgaatcatttctaaaagaaac 22805988  T
Q  314 atcacttgacaaggtttcttaaattgcc-ttatcatctg 351  Q
    ||||| ||||| |||| || |||||||| ||||||||||    
T  22805989 atcacatgacatggttactaaaattgcctttatcatctg 22806027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 19 - 352
Target Start/End: Original strand, 22840432 - 22840772
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattat------agatgaaactgttatctttacttgcca 112  Q
    |||||||||  ||| | |||||||||  |||||||||||||||||| ||||||||||||||||||||      ||||||||||||| ||| ||||||| |    
T  22840432 agtaagccagttgaggctaactcagcggtaccatcaagatataaatttgatgattggaatccattatatttatagatgaaactgttgtctatacttgcta 22840531  T
Q  113 ccaatgtaacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattat 212  Q
    ||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  22840532 ccaatgtaacatgaaaaaacaacatgaacacaagtttgatgaacatgattatagtttgtgaataaatgatgcttctgtagttctgtttggtgtttattat 22840631  T
Q  213 ttataagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaacctagctacgaattattactgaaagaaa 312  Q
    ||||||||||||||   |||||||  ||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22840632 ttataagattttgtggtaagtgaaagaaaaatttcatgtctaatttgggtcctactaagaaatgtcctggaacctagctacgaattatttctgaaagaaa 22840731  T
Q  313 catcacttgacaaggtttcttaaattgcc-ttatcatctga 352  Q
    |||  | |||| ||||| || || ||||| |||||||||||    
T  22840732 catttcatgaccaggttactaaatttgcctttatcatctga 22840772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 19 - 318
Target Start/End: Original strand, 22815407 - 22815715
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||  |||||| |||||||    
T  22815407 agtaagccatttgaggttaactcagcaataccatcaagatttaaatgtgatgattggaatccattatatatgaaactgttgtctacacttgctaccaatg 22815506  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgatta-tagtttgtgaatgaataatgcttctgtagttctgttcggtg-tttattatttat 216  Q
    |||| |||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| | || ||| ||||||||    
T  22815507 taacgagaaaaaacaacatgaacacatgtttgaggaacatgattattagtttgtgaatgaacaatgcttctgtagttctgtttgatgttttgttatttat 22815606  T
Q  217 aagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacc----tactaagaaatatcctggaacctagctacga---attattactgaaag 309  Q
    |||||||||| | |||||||| |||||||||||| |||||||||| ||    ||||||||||| ||||||||| |||||| ||   ||||||||| ||||    
T  22815607 aagattttgtgctaagtgaaggaaaaattgcatgtctaatttgggtcctaggtactaagaaatgtcctggaacttagctaggaattattattactaaaag 22815706  T
Q  310 aaacatcac 318  Q
    |||||||||    
T  22815707 aaacatcac 22815715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 9e-85
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 22810024 - 22810252
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  22810024 agtaagccatctggggttaactcagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgttatctttacttgctactaatg 22810123  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagtt---ctgttcggtgtttattattta 215  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||   ||||||  |||||||||||||    
T  22810124 taacaagaaaaaacaacataaacacaagcttgaggaacatgattatagtttgtgaatgaataatgcttctgtagttctgctgttcaatgtttattattta 22810223  T
Q  216 taagattttgtccaaagtgaagtaaaaatt 245  Q
    ||||||||| | | |||||||| |||||||    
T  22810224 taagatttt-ttctaagtgaagaaaaaatt 22810252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 22858799 - 22859041
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||| |||||| |||||||    
T  22858799 agtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccgttgtcttcacttgctaccaatg 22858898  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttataa 218  Q
    ||||||| ||| | |||||||| ||||  ||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  22858899 taacaagcaaacataacataaagacaaacttgaggaacatgattttagtttgtgaatgaacaatgcttgtgtagttctgttcggtgtttgttatttataa 22858998  T
Q  219 gattttgtccaaagtgaagtaaaaattgcatgcctaatttggg 261  Q
    |||||||| | |||||||| |||||||||||| ||||||||||    
T  22858999 gattttgtgctaagtgaaggaaaaattgcatgtctaatttggg 22859041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 7e-70
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 22842545 - 22842843
Alignment:
Q  20 gtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcc------attatagatgaaactgttatctttacttgccac 113  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||  |||||||||||||      |||||||||||||||||| |||| |||||| ||    
T  22842545 gtaagccacctgaggttaactcagcaataccatcaagatacaaatgaaatgattggaatcctctattattatagatgaaactgttgtcttcacttgctac 22842644  T
Q  114 caatgtaacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagtt---ctgttcggtgtttatt 210  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||   ||||||  ||||||||    
T  22842645 caatgtaacaagaaaaaacaacataaacacaagcttgaggaacatgattattgtttgtgaatgaacaatgcttctgtagttctgctgttcaatgtttatt 22842744  T
Q  211 atttataagattttgtccaaagtgaag-taaaaattgcatgcctaatttgggacctactaagaaatatcctggaacct-----agctacgaattattact 304  Q
    |||||||||||||||| | |||||||| | |||||  ||   |||||||||| ||||||||||||| |||||||||||     |||||||||||||||||    
T  22842745 atttataagattttgtgccaagtgaagatgaaaatacca-atctaatttgggtcctactaagaaatgtcctggaacctaactcagctacgaattattact 22842843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 22876296 - 22876567
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  22876296 agtaagccatttgaggttaactcagcaataccatcaagatataaatttgatgattggaatccattatagatgaaactgttttcttcacttgctaccaatg 22876395  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttat-- 216  Q
    |||||||| |||||||||| ||||||||  ||  |||||||||||||||||||| || |||||||||| || |||||||||   ||||||||||||||      
T  22876396 taacaagataaaacaacatgaacacaagcctgaagaacatgattatagtttgtggat-aataatgcttatgcagttctgttgattgtttattatttatta 22876494  T
Q  217 ----aagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaac 285  Q
         | ||||||||| |||||||| |||||||||| | |||||||||  ||||||||||||| |||||||||    
T  22876495 tttatatattttgtcctaagtgaagaaaaaattgcaagtctaatttggatcctactaagaaatgtcctggaac 22876567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 22889672 - 22889868
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||||    
T  22889672 agtaagccatttgtagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcacttgcaaccaatg 22889771  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttat 216  Q
    ||||| ||||||||||||| |||||| || || ||||||||||||||| |||||||| |||||||||| |  ||||| ||||  ||||| ||||||||    
T  22889772 taacatgaaaaaacaacatgaacacatgtctgaggaacatgattataggttgtgaat-aataatgcttatacagttcggttcattgtttcttatttat 22889868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 22898642 - 22898836
Alignment:
Q  18 aagtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaat 117  Q
    |||||||||||  || ||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  22898642 aagtaagccattggaggttaaattagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgttatctttacttgctaccaat 22898741  T
Q  118 gtaacaagaaaaaacaacataaacacaagtttgtggaacatgatta---tagtttgtgaatgaataatgcttctgtagttctgttcggtgtttatt 210  Q
    |||||| ||||||||||||| ||| |||| ||| ||||||||||||   |||||||||||| ||||||| |||||||||||||||  |||||||||    
T  22898742 gtaacatgaaaaaacaacatgaacgcaagcttgaggaacatgattatagtagtttgtgaat-aataatgattctgtagttctgtttagtgtttatt 22898836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 19 - 288
Target Start/End: Original strand, 22894324 - 22894606
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    ||||||||||  || ||||| | |||||||||||||||||| ||||| |||||||||||  |||||||||||||||| || |||| |||||  |||||||    
T  22894324 agtaagccattggaggttaaattagcaataccatcaagatacaaatgagatgattggaaatcattatagatgaaacttttgtcttcacttggtaccaatg 22894423  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatt----- 213  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||| |  |||||||||| ||||||||||||         
T  22894424 taacaagaaaaaacaacataaacacaagcctgaggaacatgattatagtttgtgaat-aataatgcttatacagttctgttcagtgtttattatttatta 22894522  T
Q  214 ---------tataagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaaccta 288  Q
             ||||||||||||||| | |||||| |||||||||| | |||||||||| ||||||||||||| || |||||||||    
T  22894523 tttattatgtataagattttgtcctaggtgaagaaaaaattgcaagtctaatttgggtcctactaagaaatgtcttggaaccta 22894606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 769 - 904
Target Start/End: Original strand, 22835144 - 22835279
Alignment:
Q  769 actatcaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatttagcaacagatacatacatttcagataaaaaatttac 868  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  22835144 actataaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatatagcaatagatacatacatttcagataaaaattttac 22835243  T
Q  869 tccaaagacttttcttaatacacgtgacttttgtaa 904  Q
    |||||||||||||||||| |||||||| ||||||||    
T  22835244 tccaaagacttttcttaagacacgtgatttttgtaa 22835279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 132 - 351
Target Start/End: Original strand, 22885988 - 22886210
Alignment:
Q  132 caacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcg--------gtgtttattatttataagattt 223  Q
    |||||| ||||||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||||        ||||||||||||||||||||||    
T  22885988 caacatgaacacaagtctgaggaacatgattatagtttgagaatgaatcatgcttctgtagttctgttcgagtgttcggtgtttattatttataagattt 22886087  T
Q  224 tgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaacctagctacgaattattactgaaagaaacatcacttgac 323  Q
    ||| | |||||||| |||||||||||| |||||| ||| ||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| ||      
T  22886088 tgtgctaagtgaaggaaaaattgcatgtctaattcgggtcctactaagaaatttcctagaacctagctacgaattattactaaaagaaacatcacatg-- 22886185  T
Q  324 aaggtttcttaaattgccttatcatctg 351  Q
       ||| || ||||||||||||||||||    
T  22886186 ---gttactaaaattgccttatcatctg 22886210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 354 - 503
Target Start/End: Original strand, 22810396 - 22810543
Alignment:
Q  354 atgaatgtgttacacatttgaataaatgagcacattcgaagcacaaattttctttccatctgtagtagtgggggaatatttttcaacgtattcatattaa 453  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||  ||||||||||||||||||||| |||||||| ||||||||||| | ||||||||    
T  22810396 atgaatgtgttacacatttgaataaatgtgcacatttgaaccaca--ttttctttccatctgtagtagcgggggaatgtttttcaacgtttacatattaa 22810493  T
Q  454 gtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtcta 503  Q
    ||||| ||||||||||||||| |||||||||||| |||||| ||||||||    
T  22810494 gtgttcgatgctaaattgaatatgtgaaattaaatcatcaaagtcgtcta 22810543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 82 - 288
Target Start/End: Original strand, 22873589 - 22873794
Alignment:
Q  82 ttatagatgaaactgttatctttacttgccaccaatgtaacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataa 181  Q
    ||||||||||||||||| |||| |||||| || |||||||||||| |||||||||| | ||||||  || ||||||||||||| | |||||||| |||||    
T  22873589 ttatagatgaaactgttgtcttcacttgctactaatgtaacaagataaaacaacatgagcacaagcctgaggaacatgattatggattgtgaat-aataa 22873687  T
Q  182 tgcttctgtagttctgttcggtgtttattatttataagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctg 281  Q
    ||||| || |||||| ||| |||||||||||||||| |||||||||| |||||||| |||| ||||| | |  ||||||  ||| || |||||||||| |    
T  22873688 tgcttatgcagttctattcagtgtttattatttatatgattttgtcctaagtgaagaaaaatttgcaggtcacatttggttcctgcttagaaatatcccg 22873787  T
Q  282 gaaccta 288  Q
    |||||||    
T  22873788 gaaccta 22873794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 22880944 - 22881158
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccatt------atagatgaaactgttatctttacttgcca 112  Q
    |||||||||| |||  ||| || |||||||||||||||||||||||||||||| |||||||||||      ||||||||||||||| |||| |||||| |    
T  22880944 agtaagccatttgagtttaccttagcaataccatcaagatataaatgtgatgaatggaatccattgtatttatagatgaaactgttttcttcacttgcta 22881043  T
Q  113 ccaatgtaacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattat 212  Q
     |||||||||||||||||||||||||||||||         |||    |||||||||||||||||||||| |||||||||||||    | |||| |  ||    
T  22881044 tcaatgtaacaagaaaaaacaacataaacaca---------aac----ttatagtttgtgaatgaataatacttctgtagttct----gatgttca-aat 22881125  T
Q  213 ttataagattttgtccaaagtgaagtaaaaatt 245  Q
    |||||||||||||||| |||||||| |||||||    
T  22881126 ttataagattttgtcctaagtgaagaaaaaatt 22881158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 22841175 - 22841286
Alignment:
Q  177 aataatgcttctgtagttctgttcggtgtttattatttataagattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaata 276  Q
    |||||| ||| || |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| | || ||||||| |||||||||||||     
T  22841175 aataattcttatgcagttatgttcagtgtttattatttataagattttgtccaaagtgaagaaaaaattgcaagtcttatttgggtcctactaagaaatg 22841274  T
Q  277 tcctggaaccta 288  Q
    ||||||||||||    
T  22841275 tcctggaaccta 22841286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 384 - 513
Target Start/End: Original strand, 22859131 - 22859261
Alignment:
Q  384 cacattcgaagcacaaattttctttccatctgtagtagtgggggaatatttttcaacgtattcatatt--aagtgtttgatgctaaattgaatgtgtgaa 481  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| |  |||||  ||||  ||||||| ||||||||| ||||||    
T  22859131 cacatttgaaccacaaattttctttccatctgtagtagtgggggaatgtttttcaacgtttatatattcgaagt-cttgatgcaaaattgaatatgtgaa 22859229  T
Q  482 attaaaacatcaatgtcgtctaaattcttaaa 513  Q
    |||||||||| ||||| |||||| ||||||||    
T  22859230 attaaaacattaatgttgtctaatttcttaaa 22859261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 532 - 639
Target Start/End: Original strand, 22816243 - 22816350
Alignment:
Q  532 tttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaaatgatgaatgaatatgtggtggaaggataaaaagatatatgttt 631  Q
    ||||| |||||||||||||| ||||||   ||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| ||      
T  22816243 tttcacacttgaatgtgtggccttgacctattactattgattatgctgcaaataaaatgatgaattaatacgtggtggaaggataaaaagatataagtgg 22816342  T
Q  632 gttttgac 639  Q
    ||||||||    
T  22816343 gttttgac 22816350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 384 - 504
Target Start/End: Original strand, 22806079 - 22806199
Alignment:
Q  384 cacattcgaagcacaaattttctttccatctgtagtagtgggggaatatttttcaacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaat 483  Q
    |||||| ||| |||||||||||||||||  ||||||||||||  ||| |||||||| || | ||||||||||||||||||||||||||||| ||||||||    
T  22806079 cacatttgaaccacaaattttctttccaattgtagtagtgggtaaatgtttttcaatgtttacatattaagtgtttgatgctaaattgaatatgtgaaat 22806178  T
Q  484 taaaacatcaatgtcgtctaa 504  Q
     || |||||| ||| ||||||    
T  22806179 caagacatcagtgttgtctaa 22806199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 541 - 635
Target Start/End: Original strand, 22886423 - 22886524
Alignment:
Q  541 tgaatgtgtggacttgacaagttactatt-------gattatgctgcaaatcaaatgatgaatgaatatgtggtggaaggataaaaagatatatgtttgt 633  Q
    |||||||||||||||||| ||||||||||       ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  22886423 tgaatgtgtggacttgaccagttactattgattattgattatgcttcaaatcaaatgatgaatgaatatgtggtggaaagataaaaagatatatgttggt 22886522  T
Q  634 tt 635  Q
    ||    
T  22886523 tt 22886524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 384 - 500
Target Start/End: Original strand, 22842942 - 22843059
Alignment:
Q  384 cacattcgaagcacaaattttctttccatctgtagtagtgggggaatattttt-caacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaa 482  Q
    |||||| ||| ||||||||||||||||| |||||||||||||  ||| ||||| |||  | | ||||||||||||||||||||||||||||| |||||||    
T  22842942 cacatttgaaccacaaattttctttccaactgtagtagtgggtaaatgttttttcaatttttacatattaagtgtttgatgctaaattgaatatgtgaaa 22843041  T
Q  483 ttaaaacatcaatgtcgt 500  Q
    | |||||||| |||||||    
T  22843042 tcaaaacatctatgtcgt 22843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 533 - 639
Target Start/End: Original strand, 22810585 - 22810690
Alignment:
Q  533 ttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaaatgatgaatgaatatgtggtggaaggataaaaagatatatgtttg 632  Q
    |||| |||||||| |||| |||| |  |||||||||||||| |||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||| |    
T  22810585 ttcacacttgaatatgtgcactttagcagttactattgattttgctgcaaataaaatgattaatgaatacgtggttgaaggat-aaaagatatatgttgg 22810683  T
Q  633 ttttgac 639  Q
    |||||||    
T  22810684 ttttgac 22810690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 448 - 510
Target Start/End: Original strand, 22894792 - 22894854
Alignment:
Q  448 tattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattctt 510  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22894792 tattgagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttctt 22894854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 455 - 510
Target Start/End: Original strand, 22841490 - 22841545
Alignment:
Q  455 tgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattctt 510  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22841490 tgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttctt 22841545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 532 - 587
Target Start/End: Original strand, 22843080 - 22843135
Alignment:
Q  532 tttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaa 587  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22843080 tttcacacttgaatgtgtggacttgaccagttactattgattatgctgcaaatcaa 22843135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 543 - 623
Target Start/End: Original strand, 22843134 - 22843214
Alignment:
Q  543 aatgtgtggacttgacaagttactattgattatgctgcaaatcaaatgatgaatgaatatgtggtggaaggataaaaagat 623  Q
    |||||||||| ||| |  ||||| |||||||||||||||||| |||||||||||||||| || |||||| |||||||||||    
T  22843134 aatgtgtggaattggccggttaccattgattatgctgcaaataaaatgatgaatgaatacgttgtggaaagataaaaagat 22843214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 767 - 904
Target Start/End: Original strand, 22886610 - 22886747
Alignment:
Q  767 atactatcaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatttagcaacagatacatacatttcagataaaaaattt 866  Q
    ||||||||||||||||  |||| ||| ||| |||| ||||||| |||| |||| |||||||||||||| || ||  ||| |||||||||| |||    ||    
T  22886610 atactatcaatttatctaagaatatgaaaattaactttgaatgcacttttataaaaagggtaatttagaaatagtaacacacatttcagacaaatttatt 22886709  T
Q  867 actccaaagacttttcttaatacacgtgacttttgtaa 904  Q
    |||| |||||||||| ||| ||| ||||| ||||||||    
T  22886710 actcgaaagactttttttagtacccgtgatttttgtaa 22886747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 400 - 511
Target Start/End: Original strand, 22886284 - 22886396
Alignment:
Q  400 attttctttccatctgtagtagtgggggaatatttttc-aacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtc 498  Q
    ||||| |||||| | ||||||||||| |||| |||||  ||| | | ||||||||||||||||||||||||||||| ||||||||| ||  ||||||||     
T  22886284 attttttttccaacagtagtagtgggtgaatgtttttttaacatttacatattaagtgtttgatgctaaattgaatatgtgaaatttaattatcaatgtg 22886383  T
Q  499 gtctaaattctta 511  Q
     ||||| ||||||    
T  22886384 ttctaatttctta 22886396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 22914048 - 22914124
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaact 95  Q
    ||||| |||| ||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||  |||||||    
T  22914048 agtaaaccatttgaggttaattcagcaacaccatcaagatataaatgtgatgatttgaaaccattatatgtgaaact 22914124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 448 - 513
Target Start/End: Original strand, 22816032 - 22816095
Alignment:
Q  448 tattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattcttaaa 513  Q
    ||||||||||||||||||||||||||  | |||||||||||||||| |||| ||||| ||||||||    
T  22816032 tattaagtgtttgatgctaaattgaa--tatgaaattaaaacatcagtgtcatctaatttcttaaa 22816095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 532 - 589
Target Start/End: Original strand, 22874013 - 22874070
Alignment:
Q  532 tttcaaacttgaatgtgtggacttgacaagttactattgattatgctgcaaatcaaat 589  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||||| |||| ||||    
T  22874013 tttcacacttgaatgtgtggacttgaccggttactattgattatgctgtaaataaaat 22874070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 22885937 - 22885969
Alignment:
Q  49 ccatcaagatataaatgtgatgattggaatcca 81  Q
    |||||||||||||||||||||||||||||||||    
T  22885937 ccatcaagatataaatgtgatgattggaatcca 22885969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 450 - 510
Target Start/End: Original strand, 22899055 - 22899113
Alignment:
Q  450 ttaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattctt 510  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||| ||||||    
T  22899055 ttaagtgtttgat-ctaaattgaatatgtgaaatt-aaacatcaatgtcatctatattctt 22899113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 287 - 338
Target Start/End: Original strand, 22810292 - 22810343
Alignment:
Q  287 tagctacgaattattactgaaagaaacatcacttgacaaggtttcttaaatt 338  Q
    |||||||||||||||||| ||||||||||||| ||||| |||| || |||||    
T  22810292 tagctacgaattattacttaaagaaacatcacatgacatggttactaaaatt 22810343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 2e-98; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 19 - 339
Target Start/End: Complemental strand, 21150334 - 21150029
Alignment:
Q  19 agtaagccatctgaagttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatctttacttgccaccaatg 118  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  21150334 agtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatcttcacttgctaccaatg 21150235  T
Q  119 taacaagaaaaaacaacataaacacaagtttgtggaacatgattatagtttgtgaatgaataatgcttctgtagttctgttcggtgtttattatttataa 218  Q
    ||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  21150234 taacaagattaaacaacataaacacaagcttgaggaacatgattatagtttgtgaatgaacaatgcttctgtagttctgtttgatgtttattatttataa 21150135  T
Q  219 gattttgtccaaagtgaagtaaaaattgcatgcctaatttgggacctactaagaaatatcctggaacctagctacgaattattactgaaagaaacatcac 318  Q
    |||||||| | |||||||| ||||||||||||                ||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  21150134 gattttgtgctaagtgaaggaaaaattgcatg---------------tctaagaaatgtccgggaacctagctacgaattattactaaaagaaacatcac 21150050  T
Q  319 ttgacaaggtttcttaaattg 339  Q
     ||||| |||| || ||||||    
T  21150049 atgacatggttactaaaattg 21150029  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 418 - 509
Target Start/End: Complemental strand, 21149910 - 21149819
Alignment:
Q  418 gtagtgggggaatatttttcaacgtattcatattaagtgtttgatgctaaattgaatgtgtgaaattaaaacatcaatgtcgtctaaattct 509  Q
    |||||||| |||| |||||||| || | | | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  21149910 gtagtgggtgaatgtttttcaatgtttacgtgttaagtgtttgatgctaaattgaatatgtgaaattaaaacatcaatgtcgtctaatttct 21149819  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 794 - 830
Target Start/End: Original strand, 35877111 - 35877147
Alignment:
Q  794 aaaataacattgaatgtacttatatacaaagggtaat 830  Q
    |||||||||||||||||| ||||||||||||||||||    
T  35877111 aaaataacattgaatgtatttatatacaaagggtaat 35877147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 831
Target Start/End: Complemental strand, 897310 - 897241
Alignment:
Q  762 tattaatactatcaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatt 831  Q
    ||||||||||||| ||||||| | ||| ||| ||| ||||||| |||||| |||| ||||||| ||||||    
T  897310 tattaatactatctatttatcttggaatatgaaaagtaacattaaatgtatttatgtacaaagagtaatt 897241  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 753 - 834
Target Start/End: Complemental strand, 52934570 - 52934488
Alignment:
Q  753 atatacccct-attaatactatcaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatttag 834  Q
    |||||||||| |||||||| ||||||| ||| | ||| ||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  52934570 atataccccttattaatacaatcaattcatcttggaatatgaaaagtaacattgaatgtatttataaacaaaggataatttag 52934488  T

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Target: scaffold0533 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 768 - 858
Target Start/End: Complemental strand, 3242 - 3152
Alignment:
Q  768 tactatcaatttatcatagaaaatgcaaaataacattgaatgtacttatatacaaagggtaatttagcaacagatacatacatttcagata 858  Q
    |||||| |||||||| |  || ||| ||||||||||| ||| || ||||| ||||| | |||||||| ||||||  |||||||||||||||    
T  3242 tactattaatttatcttgaaatatgaaaaataacattaaatatatttatacacaaatgataatttagtaacagacgcatacatttcagata 3152  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 694 - 736
Target Start/End: Original strand, 42447348 - 42447390
Alignment:
Q  694 taaatataagactcactacaaattactaaatgcatttgttatt 736  Q
    ||||||||||||||| |||||||||||| |||||||| |||||    
T  42447348 taaatataagactcattacaaattactagatgcatttattatt 42447390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 688 - 730
Target Start/End: Original strand, 4523922 - 4523964
Alignment:
Q  688 tgtccttaaatataagactcactacaaattactaaatgcattt 730  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||    
T  4523922 tgtccctaaatataagactcgctacaaattactagatgcattt 4523964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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