View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_high_19 (Length: 423)
Name: NF13926_high_19
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 2 - 405
Target Start/End: Complemental strand, 26044509 - 26044106
Alignment:
| Q |
2 |
gagatgaaatcagtagcaattctaccatttgagaatctaccagtagcatcaccatttggaaaatctttaccataaggtggaaaattgctcctagctaatg |
101 |
Q |
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| T |
26044509 |
gagatgaaatcagtagcaattctaccatttgagaatataccagtagcatcaccatttggaaaatctttaccataaggtggaaaattgctcctagctaatg |
26044410 |
T |
|
| Q |
102 |
ttggaatgaaattattgttacctgaatcaacagaagaatctccaaaaacaattatagctggaacttttccactgtttgatattgaaacatgcaacaaaat |
201 |
Q |
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| T |
26044409 |
ttggaatgaaattattgttacctgaatcaacagaagaatctccaaaaacaattatagctggaacttttccactgtttgatattgaaacatgcaacaaaat |
26044310 |
T |
|
| Q |
202 |
ttgaataaagaagagccataaaatgtacattttcatcatttttcacctggtttcactaaattgattatgcaagtgattgcagagaatgatataaagagat |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26044309 |
ttgaataaagaagagccataaaatgtacattttcatcatttttcacctggtttcactaaattgattatgcaagtgattgcagagaatgatataaagagat |
26044210 |
T |
|
| Q |
302 |
tgattgtttgtatgagtcctatgatactaggactcttatttatgggacaattttaatacctgtttgtttgcatatatataaacattttgagcagcattct |
401 |
Q |
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| T |
26044209 |
tgattgtttgtatgagtcctatgatactaggactcttatttatgggacaattttagtacctgtttgtttgcatatatataaacattttgagcagcattct |
26044110 |
T |
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| Q |
402 |
aatt |
405 |
Q |
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|||| |
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| T |
26044109 |
aatt |
26044106 |
T |
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