View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13926_high_24 (Length: 402)

Name: NF13926_high_24
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13926_high_24
NF13926_high_24
[»] chr2 (37 HSPs)
chr2 (1-327)||(12795855-12796177)
chr2 (249-327)||(27317453-27317531)
chr2 (250-341)||(30331811-30331902)
chr2 (252-345)||(42419849-42419942)
chr2 (245-341)||(23974407-23974503)
chr2 (246-325)||(2142730-2142809)
chr2 (249-327)||(4606999-4607077)
chr2 (246-299)||(18179051-18179104)
chr2 (249-334)||(31744365-31744450)
chr2 (257-318)||(39073628-39073689)
chr2 (251-313)||(40682312-40682377)
chr2 (250-312)||(3312166-3312228)
chr2 (249-299)||(10619138-10619188)
chr2 (247-280)||(6561458-6561491)
chr2 (250-310)||(449938-449998)
chr2 (257-297)||(2416417-2416457)
chr2 (249-313)||(15305762-15305826)
chr2 (249-341)||(26202088-26202180)
chr2 (252-324)||(44590101-44590173)
chr2 (246-324)||(8017510-8017589)
chr2 (262-309)||(12464404-12464451)
chr2 (250-341)||(24100988-24101079)
chr2 (249-312)||(42659129-42659192)
chr2 (250-288)||(18525160-18525198)
chr2 (249-309)||(15370241-15370302)
chr2 (251-288)||(40059381-40059418)
chr2 (251-288)||(40085281-40085318)
chr2 (245-318)||(43036639-43036712)
chr2 (246-279)||(43529773-43529806)
chr2 (235-288)||(44438745-44438798)
chr2 (252-324)||(1633421-1633493)
chr2 (249-289)||(1830151-1830191)
chr2 (260-307)||(14277822-14277870)
chr2 (265-313)||(19608567-19608615)
chr2 (245-277)||(21279963-21279995)
chr2 (250-325)||(22878173-22878249)
chr2 (257-309)||(31561668-31561720)
[»] chr5 (27 HSPs)
chr5 (250-332)||(39594876-39594958)
chr5 (251-341)||(9107150-9107240)
chr5 (249-341)||(10640013-10640105)
chr5 (257-318)||(11064749-11064810)
chr5 (245-324)||(32941546-32941626)
chr5 (258-313)||(12425661-12425716)
chr5 (262-341)||(15015904-15015982)
chr5 (250-309)||(41419411-41419470)
chr5 (250-309)||(41534530-41534589)
chr5 (249-323)||(6521156-6521230)
chr5 (249-341)||(16937801-16937893)
chr5 (265-313)||(19460260-19460308)
chr5 (252-327)||(7674721-7674796)
chr5 (249-324)||(32010022-32010097)
chr5 (250-313)||(34736446-34736509)
chr5 (262-299)||(35445775-35445812)
chr5 (263-327)||(15246907-15246971)
chr5 (242-290)||(32197844-32197892)
chr5 (249-359)||(7705916-7706029)
chr5 (249-312)||(12433091-12433154)
chr5 (258-308)||(40426858-40426908)
chr5 (284-334)||(42228106-42228156)
chr5 (245-326)||(37112192-37112273)
chr5 (246-287)||(40111382-40111423)
chr5 (244-341)||(42500156-42500252)
chr5 (249-306)||(42568948-42569005)
chr5 (245-289)||(14331478-14331522)
[»] chr7 (35 HSPs)
chr7 (249-341)||(19302481-19302573)
chr7 (249-341)||(4970710-4970802)
chr7 (249-305)||(44822054-44822110)
chr7 (250-313)||(22296147-22296210)
chr7 (245-312)||(33266400-33266467)
chr7 (273-341)||(19022527-19022595)
chr7 (238-341)||(45593588-45593692)
chr7 (257-324)||(48470121-48470188)
chr7 (252-312)||(9210910-9210970)
chr7 (247-299)||(34036019-34036071)
chr7 (249-341)||(34744088-34744180)
chr7 (263-318)||(18765367-18765422)
chr7 (262-313)||(46280211-46280262)
chr7 (248-306)||(31744897-31744955)
chr7 (245-323)||(37064382-37064460)
chr7 (284-341)||(19214359-19214416)
chr7 (246-298)||(41040267-41040320)
chr7 (250-290)||(24048651-24048691)
chr7 (245-324)||(20526523-20526602)
chr7 (250-313)||(22283565-22283628)
chr7 (254-313)||(43694491-43694550)
chr7 (245-327)||(11782957-11783039)
chr7 (249-327)||(18962501-18962579)
chr7 (250-288)||(44917445-44917483)
chr7 (251-313)||(49019957-49020019)
chr7 (249-325)||(30748952-30749029)
chr7 (249-278)||(32157085-32157114)
chr7 (252-313)||(45338541-45338602)
chr7 (245-341)||(11619072-11619168)
chr7 (249-313)||(20234548-20234612)
chr7 (249-309)||(25596124-25596184)
chr7 (246-278)||(28691751-28691783)
chr7 (247-287)||(30134246-30134286)
chr7 (249-309)||(33128843-33128903)
chr7 (244-288)||(47046021-47046065)
[»] chr1 (26 HSPs)
chr1 (249-341)||(2295156-2295248)
chr1 (250-313)||(6102241-6102304)
chr1 (250-327)||(50644174-50644251)
chr1 (257-341)||(49938807-49938891)
chr1 (247-318)||(33204310-33204381)
chr1 (262-324)||(38001672-38001734)
chr1 (248-327)||(3233932-3234011)
chr1 (251-312)||(24334284-24334345)
chr1 (250-326)||(46504137-46504214)
chr1 (266-326)||(39658444-39658504)
chr1 (259-318)||(39976138-39976197)
chr1 (261-327)||(36514606-36514672)
chr1 (250-312)||(37617384-37617446)
chr1 (263-304)||(7028399-7028440)
chr1 (252-288)||(17009503-17009539)
chr1 (245-313)||(34952290-34952358)
chr1 (250-312)||(6292580-6292643)
chr1 (251-334)||(15943027-15943110)
chr1 (257-312)||(38116003-38116058)
chr1 (252-313)||(40413943-40414005)
chr1 (247-280)||(30013995-30014028)
chr1 (252-289)||(34303178-34303215)
chr1 (251-307)||(1510230-1510286)
chr1 (247-299)||(7244570-7244622)
chr1 (260-308)||(15784410-15784458)
chr1 (245-281)||(29793877-29793913)
[»] chr4 (39 HSPs)
chr4 (247-327)||(52315113-52315193)
chr4 (249-341)||(21731574-21731666)
chr4 (245-312)||(27043744-27043811)
chr4 (258-341)||(29657444-29657527)
chr4 (249-327)||(55437150-55437228)
chr4 (251-311)||(15173223-15173283)
chr4 (249-341)||(54426103-54426195)
chr4 (249-312)||(39691067-39691130)
chr4 (257-324)||(40174634-40174701)
chr4 (250-313)||(41336848-41336911)
chr4 (252-310)||(43506026-43506084)
chr4 (249-341)||(17822783-17822875)
chr4 (249-313)||(29388702-29388766)
chr4 (245-313)||(35571545-35571613)
chr4 (245-280)||(679412-679447)
chr4 (245-312)||(2244140-2244207)
chr4 (249-324)||(49940085-49940160)
chr4 (247-289)||(41433487-41433529)
chr4 (235-324)||(25571336-25571425)
chr4 (249-338)||(27329994-27330083)
chr4 (249-313)||(8705029-8705093)
chr4 (245-313)||(13126490-13126558)
chr4 (249-309)||(44797972-44798032)
chr4 (245-280)||(7367968-7368003)
chr4 (250-313)||(24169351-24169414)
chr4 (249-296)||(42403941-42403988)
chr4 (266-312)||(1706711-1706757)
chr4 (250-311)||(6987660-6987722)
chr4 (258-324)||(25904150-25904216)
chr4 (250-312)||(44862903-44862965)
chr4 (252-312)||(19305014-19305075)
chr4 (252-341)||(22030263-22030352)
chr4 (249-318)||(29774323-29774392)
chr4 (250-283)||(40613289-40613322)
chr4 (245-285)||(1133044-1133084)
chr4 (249-313)||(18815111-18815175)
chr4 (249-289)||(22662169-22662209)
chr4 (249-289)||(22666648-22666688)
chr4 (245-289)||(26590636-26590680)
[»] chr3 (36 HSPs)
chr3 (247-306)||(25447161-25447220)
chr3 (249-341)||(20257596-20257689)
chr3 (247-324)||(21367744-21367821)
chr3 (251-324)||(24085258-24085331)
chr3 (244-289)||(30657398-30657443)
chr3 (257-341)||(31365114-31365198)
chr3 (249-324)||(402460-402535)
chr3 (250-313)||(26990144-26990207)
chr3 (257-299)||(33405118-33405160)
chr3 (249-327)||(42747700-42747778)
chr3 (263-324)||(18405763-18405824)
chr3 (252-293)||(26911699-26911740)
chr3 (260-313)||(36783281-36783334)
chr3 (249-297)||(16072959-16073007)
chr3 (257-341)||(31365235-31365319)
chr3 (249-324)||(42799884-42799960)
chr3 (246-306)||(50946201-50946261)
chr3 (250-281)||(28779439-28779470)
chr3 (246-310)||(36507007-36507073)
chr3 (245-324)||(39980806-39980885)
chr3 (245-280)||(43875587-43875622)
chr3 (240-286)||(31615469-31615515)
chr3 (273-327)||(37389257-37389311)
chr3 (251-312)||(584135-584196)
chr3 (249-306)||(20170632-20170689)
chr3 (250-313)||(32582828-32582888)
chr3 (250-295)||(33046717-33046762)
chr3 (250-295)||(34610725-34610770)
chr3 (257-341)||(22892-22976)
chr3 (257-313)||(9832681-9832737)
chr3 (248-280)||(11253622-11253654)
chr3 (250-338)||(24684741-24684829)
chr3 (249-313)||(26878288-26878352)
chr3 (245-285)||(32663754-32663794)
chr3 (245-277)||(47903994-47904026)
chr3 (249-313)||(53493843-53493907)
[»] chr8 (39 HSPs)
chr8 (250-318)||(1096573-1096641)
chr8 (249-313)||(38602415-38602479)
chr8 (240-327)||(32840895-32840982)
chr8 (243-313)||(36963266-36963336)
chr8 (250-318)||(1074187-1074255)
chr8 (249-313)||(30251372-30251436)
chr8 (251-313)||(1057997-1058059)
chr8 (257-326)||(6950396-6950466)
chr8 (263-341)||(26771325-26771403)
chr8 (243-313)||(42893402-42893472)
chr8 (245-318)||(26215542-26215615)
chr8 (242-339)||(35534524-35534621)
chr8 (252-324)||(43717855-43717927)
chr8 (250-341)||(10758176-10758267)
chr8 (261-312)||(27028920-27028971)
chr8 (257-324)||(38648428-38648495)
chr8 (250-327)||(2487927-2488005)
chr8 (249-299)||(15247695-15247745)
chr8 (245-309)||(922320-922385)
chr8 (257-318)||(6525900-6525961)
chr8 (249-325)||(14280339-14280416)
chr8 (246-299)||(18930797-18930850)
chr8 (249-289)||(7008710-7008750)
chr8 (250-314)||(30657696-30657760)
chr8 (245-307)||(1892138-1892201)
chr8 (245-280)||(10727465-10727500)
chr8 (282-324)||(6882004-6882046)
chr8 (249-299)||(15180641-15180691)
chr8 (283-341)||(28763428-28763486)
chr8 (242-280)||(40357049-40357087)
chr8 (247-289)||(41336556-41336598)
chr8 (252-313)||(12496993-12497054)
chr8 (249-313)||(900629-900693)
chr8 (273-313)||(1930123-1930163)
chr8 (249-305)||(8407738-8407794)
chr8 (257-301)||(16915833-16915877)
chr8 (245-313)||(18591890-18591958)
chr8 (249-301)||(32213219-32213271)
chr8 (252-327)||(39551130-39551206)
[»] chr6 (17 HSPs)
chr6 (238-313)||(21405061-21405136)
chr6 (245-341)||(31623610-31623706)
chr6 (245-327)||(10645299-10645381)
chr6 (249-318)||(34404644-34404713)
chr6 (246-305)||(7351586-7351646)
chr6 (249-341)||(34430775-34430866)
chr6 (249-312)||(34910327-34910390)
chr6 (249-304)||(35069530-35069585)
chr6 (263-313)||(2455076-2455126)
chr6 (244-290)||(30536878-30536924)
chr6 (257-299)||(32729069-32729111)
chr6 (249-313)||(848077-848140)
chr6 (253-289)||(2455922-2455958)
chr6 (249-289)||(2457053-2457093)
chr6 (245-273)||(6310166-6310194)
chr6 (249-313)||(24982793-24982857)
chr6 (252-327)||(26559160-26559236)
[»] scaffold0110 (1 HSPs)
scaffold0110 (250-311)||(33832-33893)


Alignment Details
Target: chr2 (Bit Score: 238; Significance: 1e-131; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 12796177 - 12795855
Alignment:
Q  1 aattgttgttttatgttcttttctgagtgaccattcatattatttgctctatttgaaactgcttgactttgtttctttgtactatgatcattcatctcca 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12796177 aattgttgttttatgttcttttcagagtcaccattcatattagttgctctatttgaaactgcttgactttgtttctttgtgctatgatcattcatctcca 12796078  T
Q  101 gttcagcttgagagcttctatctgcaatttgggttacagtactgctgactcatggtagcagttggatttcttatttcttttgtaggatgttgggccaaca 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  12796077 gttcagcttgagagcttccatctgcaatttgggttacagtactgctgactcatggtagcagttggatttcgtatttctttggtaggatgttgggccaaca 12795978  T
Q  201 atactacgaaggaaatagatatccagccactaccgttagtcttggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagat 300  Q
    ||||||| |||||||||||||||||||| |||| || |||||||||||||||||| |||||||||||| ||| |||||||     ||||||||||||||     
T  12795977 atactaccaaggaaatagatatccagccgctactgtcagtcttggggtctgtttggattgacttattttagtctatctacg----taagttttgtgagac 12795882  T
Q  301 tgtttgggagaacgtatgtaaacaact 327  Q
     ||||||||||||||||| ||||||||    
T  12795881 agtttgggagaacgtatgaaaacaact 12795855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 27317531 - 27317453
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||| |||| ||||||||    
T  27317531 ctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaact 27317453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 30331902 - 30331811
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||| |||||||||||| || |||||||| |||||||||||||||||| ||||||||||||| |||| ||| | || | |||||||||||    
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttca 30331811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 252 - 345
Target Start/End: Complemental strand, 42419942 - 42419849
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttcagctt 345  Q
    |||| |||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||| || | ||||| || | |||| ||||||||||    
T  42419942 tttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttcagctt 42419849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 23974407 - 23974503
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| |||||| ||||||||||||| |||||||||| ||||| || || |||||||||||| ||||||| |||| ||||| || | |||||||||||    
T  23974407 gggtatgtttggattgacttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatgacaattttca 23974503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 325
Target Start/End: Complemental strand, 2142809 - 2142730
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaa 325  Q
    ||||||||||  |||||||||||||||||||||||   |||||||||| ||||| ||||||||||||| |||| ||||||    
T  2142809 ggtctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaa 2142730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 4607077 - 4606999
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    ||||||| |||| |||||||||| ||||||||| | ||||||||||||||| | ||||||||||| | || ||||||||    
T  4607077 ctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaact 4606999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 18179104 - 18179051
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    |||||||||| ||||||||||||||| ||||||||  |||||||||||||||||    
T  18179104 ggtctgtttggattgacttatttgagcttatctactaacataagttttgtgaga 18179051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 334
Target Start/End: Complemental strand, 31744450 - 31744365
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagaca 334  Q
    ||||||| |||| |||||||| | ||||||||||||||||||||| ||||| |||||| |||||| | || ||||| || ||||||    
T  31744450 ctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagcttaagaca 31744365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 39073628 - 39073689
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||| ||||||||||| |||||||||||||| |||||||||| ||||||| ||||| ||||    
T  39073628 attgatttatttgagttcatctaccgacataatttttgtgagactgtttggaagaacttatg 39073689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 40682312 - 40682377
Alignment:
Q  251 gtttgaattgacttatttgagtttatctacc---gacataagttttgtgagattgtttgggagaac 313  Q
    ||||| |||| ||||||||||||| |||||    ||||||||||||||||||||||||||||||||    
T  40682312 gtttggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaac 40682377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 3312228 - 3312166
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||||| |||| |||||||||| |||||||| ||| |||||||||||||| |||| |||||||    
T  3312228 tgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgttggggagaa 3312166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 10619138 - 10619188
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||||| ||||||| |||||||||||||||| |||| |||||||||||||    
T  10619138 ctgtttggattgactcatttgagtttatctactgacacaagttttgtgaga 10619188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 280
Target Start/End: Complemental strand, 6561491 - 6561458
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctac 280  Q
    ||||||||||||||||||||||||||||||||||    
T  6561491 gtctgtttgaattgacttatttgagtttatctac 6561458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 449998 - 449938
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggag 310  Q
    |||||| ||| ||||||||||| ||||||||   |||||||||| ||||||||||||||||    
T  449998 tgtttgcattaacttatttgagcttatctactagcataagttttatgagattgtttgggag 449938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 2416457 - 2416417
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtga 297  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  2416457 attgacttatttgagtttatctactaacataagttttgtga 2416417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 15305826 - 15305762
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| |||| |||||||||| |||||||  |||||||||||||||| | ||||||| |||||    
T  15305826 ctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaac 15305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 26202180 - 26202088
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| ||| ||||||||||  |||||| | |||||||||||||||||||| ||||  ||||  ||||  ||||||| | |||||||||||    
T  26202180 ctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttca 26202088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 44590173 - 44590101
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| |||| ||||||||||||||||||  ||||||||||||||||||  |||||  ||||| |||| |||||    
T  44590173 tttggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaaca 44590101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 324
Target Start/End: Complemental strand, 8017589 - 8017510
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||||||| ||||||||||||||| |||||||  ||||||||   ||||| |||| ||||||||||| |||| |||||    
T  8017589 ggtctgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaaca 8017510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 12464404 - 12464451
Alignment:
Q  262 cttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||||||| |||||||  ||||||||||||||||| |||||||||    
T  12464404 cttatttgagtgtatctactaacataagttttgtgagaatgtttggga 12464451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 341
Target Start/End: Complemental strand, 24101079 - 24100988
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||||| |||||||||||  |||| ||    |||||||||||||||| ||||||||||||| |||| ||||| || | |||||| ||||    
T  24101079 tgtttgaatcgacttatttgaacttatatattatcataagttttgtgagactgtttgggagaacttatggaaacaccttatgacaatattca 24100988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 42659129 - 42659192
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||||||  ||| |||||||||| |||| ||| | |||||||||||||||| ||||||||||||    
T  42659129 ctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaa 42659192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 18525160 - 18525198
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataa 288  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  18525160 tgtttgaattgacttatttgagcttatctacagacataa 18525198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 309
Target Start/End: Original strand, 15370241 - 15370302
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttggga 309  Q
    ||||||| ||||||||||||||| |||||||| | ||||||  ||||||||| |||||||||    
T  15370241 ctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga 15370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 40059381 - 40059418
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataa 288  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  40059381 gtttggattgacttatttgagtttatctactgacataa 40059418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 40085281 - 40085318
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataa 288  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  40085281 gtttggattgacttatttgagtttatctactgacataa 40085318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 43036712 - 43036639
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||||||| ||||  ||||||||| |||||||   ||||||||||||||||| | ||||||| ||| ||||    
T  43036712 gggtctgtttgtattggattatttgagcttatctagttacataagttttgtgagagtatttgggaaaacttatg 43036639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 279
Target Start/End: Original strand, 43529773 - 43529806
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatcta 279  Q
    |||||||||||||||||||||||||| |||||||    
T  43529773 ggtctgtttgaattgacttatttgagcttatcta 43529806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 288
Target Start/End: Original strand, 44438745 - 44438798
Alignment:
Q  235 gttagtcttggggtctgtttgaattgacttatttgagtttatctaccgacataa 288  Q
    |||| |||| ||| ||||||||||||||| ||||||| |||||||| |||||||    
T  44438745 gttaatcttagggcctgtttgaattgactgatttgagcttatctacagacataa 44438798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 1633421 - 1633493
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| ||| ||||||||||||||||||||   |||||||||||| | | |||| |||||||| |||| |||||    
T  1633421 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 1830191 - 1830151
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||| |||||||||||||||||||| ||| ||||||||    
T  1830191 ctgtttggattgacttatttgagtttatttactgacataag 1830151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 307
Target Start/End: Original strand, 14277822 - 14277870
Alignment:
Q  260 gacttatttgagtttatctaccgacataagt-tttgtgagattgtttgg 307  Q
    ||||||||||||||||||||| |||||||||  |||||||| |||||||    
T  14277822 gacttatttgagtttatctacggacataagtacttgtgagagtgtttgg 14277870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 19608567 - 19608615
Alignment:
Q  265 atttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||||||||||| |||||| ||||| ||||| |||||| ||||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaac 19608615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 21279963 - 21279995
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatc 277  Q
    |||| ||||||||||||||||||||||||||||    
T  21279963 gggtttgtttgaattgacttatttgagtttatc 21279995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 325
Target Start/End: Complemental strand, 22878249 - 22878173
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaa 325  Q
    |||||| ||||||||||||||| ||||| || ||||||||   |||||||| ||||||||||| | |||| ||||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaa 22878173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 31561668 - 31561720
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||||||||||| ||||||||  ||||||||||||| | | |||||||||    
T  31561668 attgacttatttgagattatctactaacataagttttgtaaaactgtttggga 31561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 250 - 332
Target Start/End: Complemental strand, 39594958 - 39594876
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaaga 332  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||| ||||| |||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaaga 39594876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 341
Target Start/End: Complemental strand, 9107240 - 9107150
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||  ||| ||||| || | |||||||||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttca 9107150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 10640105 - 10640013
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| |||  ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| ||||| || | |||| ||||||    
T  10640105 ctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttca 10640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 11064810 - 11064749
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  11064810 attgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatg 11064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 32941626 - 32941546
Alignment:
Q  245 gggtctgtttgaattgacttatttgag-tttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||||||| ||||||||||| ||| ||||||||| |||||||||| |||||||  |||||||||||| |||| |||||    
T  32941626 gggtctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaaca 32941546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 12425716 - 12425661
Alignment:
Q  258 ttgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaac 12425661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 341
Target Start/End: Complemental strand, 15015982 - 15015904
Alignment:
Q  262 cttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||| |||||||| |||||||| ||||||||| ||||||||||||| |||| |||  | |||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatg-aaaatattgaagacaattttca 15015904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 41419470 - 41419411
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||||||||||||||||||||    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttggga 41419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 41534589 - 41534530
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||||||||||||||||||||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttggga 41534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 6521230 - 6521156
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaac 323  Q
    ||||||| ||||||||||| ||| | | |||| |||||| ||||||||||||||||||||||||| |||| ||||    
T  6521230 ctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaac 6521156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 16937801 - 16937893
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| |||| |||||||||| ||||||||   |||||||||||||||| ||||||| ||||| |||| ||||| || | ||||| |||||    
T  16937801 ctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttca 16937893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 313
Target Start/End: Original strand, 19460260 - 19460308
Alignment:
Q  265 atttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||    
T  19460260 atttgagtttatctactggcataagtttagtgagattgtttgggagaac 19460308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 7674796 - 7674721
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| |||| |||||||||| ||||||||| || |||||||||||||| || |||| ||||| |||| ||||||||    
T  7674796 tttggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaact 7674721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 32010097 - 32010022
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||  | ||| |||||| |||||| |||| |||||    
T  32010097 ctgtttggattgacttatttgagtttatctactcacataagtttcttcagactgtttgagagaacttatgaaaaca 32010022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 34736446 - 34736509
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||| ||||||   ||||||||||||||||||  ||||||||||||    
T  34736446 tgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaac 34736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 35445775 - 35445812
Alignment:
Q  262 cttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgaga 35445812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 15246971 - 15246907
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    ||||||||| |||||||| |||||||||||| | ||| ||||||||||||| |||| || |||||    
T  15246971 ttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaact 15246907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 32197892 - 32197844
Alignment:
Q  242 ttggggtctgtttgaattgacttatttgagtttatctaccgacataagt 290  Q
    |||| ||||||||| |||||||| ||||||||||||||| |||||||||    
T  32197892 ttggagtctgtttggattgacttttttgagtttatctactgacataagt 32197844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 359
Target Start/End: Original strand, 7705916 - 7706029
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca---gctt 345  Q
    ||||||| |||||||||||||||  |||||||   ||||||||||||||   | ||||||||||| |||| ||||| || | |||| ||||||   ||||    
T  7705916 ctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctgctt 7706015  T
Q  346 ttatcggcttattt 359  Q
    || |||||||||||    
T  7706016 ttttcggcttattt 7706029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 12433091 - 12433154
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||| |||| |||||||||  |||| ||| | |||| ||||||||||||||||||||||||    
T  12433091 ctgtttggattggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaa 12433154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 40426908 - 40426858
Alignment:
Q  258 ttgacttatttgagtttatctaccgacataagttttgtgagattgtttggg 308  Q
    |||||||||||||| |||||||  ||||||| |||||||||| ||||||||    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttggg 40426858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 42228156 - 42228106
Alignment:
Q  284 cataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagaca 334  Q
    ||||||||| |||||||||||||||||||| |||| ||||| || ||||||    
T  42228156 cataagtttcgtgagattgtttgggagaacttatggaaacagcttaagaca 42228106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 37112192 - 37112273
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaac 326  Q
    |||||||||||||| |||||||||||| || || || |||||||  || |||||| |||| |||||||  |||| |||||||    
T  37112192 gggtctgtttgaatcgacttatttgagcttttccactgacataatattcgtgagactgttagggagaatttatgaaaacaac 37112273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 40111423 - 40111382
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacata 287  Q
    |||||||||  |||||||||||||||||||||||| ||||||    
T  40111423 ggtctgtttcgattgacttatttgagtttatctactgacata 40111382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 341
Target Start/End: Original strand, 42500156 - 42500252
Alignment:
Q  244 ggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| ||||||| ||||  |||||||   ||| |||| |||||||||||||||||| | ||| ||||||| |||| |||||||| | |||||||||||    
T  42500156 ggggcctgtttggattggtttatttggacttacctactgacataagttttgtgagactcttt-ggagaacttatggaaacaacttacgacaattttca 42500252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 42568948 - 42569005
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttg 306  Q
    ||||||| ||||||||||||||||||||  ||  |||||||||| |||||| ||||||    
T  42568948 ctgtttggattgacttatttgagtttatgcactaacataagtttcgtgagactgtttg 42569005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 14331522 - 14331478
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||||||| ||||||||||||||| |||||||| | ||||||    
T  14331522 gggtctgtttggattgacttatttgagcttatctactgtcataag 14331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 19302481 - 19302573
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||  |||| ||||| || | |||||||||||    
T  19302481 ctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttca 19302573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 4970710 - 4970802
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| ||||||||||||||| ||||||   ||||||||| |||||||| ||||||||||||| |||| |||||||| | | |||||||||    
T  4970710 ctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttca 4970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 44822110 - 44822054
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgttt 305  Q
    ||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  44822110 ctgtttggattgacttatttgagtttatctgctgacataagttttgtgagattgttt 44822054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 22296147 - 22296210
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||||||||||||||||||    |||||||||| |||||||||||||||||||||    
T  22296147 tgtttgaattgacttatttgagtttatccggtgacataagttctgtgagattgtttgggagaac 22296210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 33266400 - 33266467
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||    
T  33266400 gggtatgtttggattgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaa 33266467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 19022527 - 19022595
Alignment:
Q  273 ttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||| ||||| |||||||||||||||||||||||||  |||| |||||||| | |||||||||||    
T  19022527 ttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttca 19022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 341
Target Start/End: Complemental strand, 45593692 - 45593588
Alignment:
Q  238 agtcttggggtctgtttgaattgacttatttgagtttatct-accgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaat 336  Q
    ||||||| || ||||||| |||| ||||||||||||||| | || |||||||| ||||||||| ||||||||||||| |||  ||||| |||| |||| |    
T  45593692 agtcttgaggcctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatt 45593593  T
Q  337 tttca 341  Q
    |||||    
T  45593592 tttca 45593588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 48470188 - 48470121
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| |||||||||| |||||||  |||||||||||| ||||||||||||||||||| |||| |||||    
T  48470188 attggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaaca 48470121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 9210970 - 9210910
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||| ||||||||||||||| |||||||| || ||||||||| ||||| ||||||||||||    
T  9210970 tttggattgacttatttgagcttatctactgatataagttttctgagactgtttgggagaa 9210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 34036071 - 34036019
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||||||||||||||||||||||| |||||||| |||||| || ||||||||    
T  34036071 gtctgtttgaattgacttatttgagcttatctactgacatatgtattgtgaga 34036019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 34744180 - 34744088
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||||||||| | ||||||| ||||||||  ||||||| ||||||||| ||||||| |||||  ||| ||| |||| | |||||||||||    
T  34744180 ctgtttgaattgaataatttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttca 34744088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 18765422 - 18765367
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||||| |||||||  |||||||||||||||||| ||||||||||||| ||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaacttatg 18765367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 46280211 - 46280262
Alignment:
Q  262 cttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||||||| | |||||| ||||||||||| |||||||||||||    
T  46280211 cttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaac 46280262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 31744955 - 31744897
Alignment:
Q  248 tctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttg 306  Q
    |||||||| ||| |||||||||| ||||||||||||| ||| |||| ||||||||||||    
T  31744955 tctgtttggattaacttatttgaatttatctaccgacgtaaattttatgagattgtttg 31744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 37064382 - 37064460
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaac 323  Q
    ||||||||||| ||||||||||||||  |||||||| || ||||||| ||| |||||||| ||||| || |||| ||||    
T  37064382 gggtctgtttggattgacttatttgatcttatctactgatataagttctgttagattgttcgggagcacttatgaaaac 37064460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 19214359 - 19214416
Alignment:
Q  284 cataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||||||||||||||||||||| |||| ||||| |  | |||||||||||    
T  19214359 cataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttca 19214416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 41040320 - 41040267
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataagt-tttgtgag 298  Q
    |||||||||||||||| |||||||||||||||||| || |||||| ||||||||    
T  41040320 ggtctgtttgaattgatttatttgagtttatctactgatataagtatttgtgag 41040267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 24048691 - 24048651
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagt 290  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  24048691 tgtttgaatttacttatttgagtttatctactgacataagt 24048651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 20526602 - 20526523
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| |||||| |||||||||||||||||||||||  |  | || |||||||||| |||||| |||||| |||| |||||    
T  20526602 gggtttgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaaca 20526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 22283565 - 22283628
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||  |||||||| | ||||| |||||||||| ||||| |||||||    
T  22283565 tgtttggattgacttatttgaacttatctactgtcataaattttgtgagactgtttaggagaac 22283628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 43694491 - 43694550
Alignment:
Q  254 tgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||| ||||||||||||||||||  | |||||||||  |||| |||||||||||||    
T  43694491 tgaattgatttatttgagtttatctactaatataagttttacgagactgtttgggagaac 43694550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 11782957 - 11783039
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| |||||| ||||||||||||||| |||||||| ||  ||||||| |||||| || || ||||||| | || ||||||||    
T  11782957 gggtttgtttggattgacttatttgagattatctactgatgtaagtttagtgagactgattaggagaacttttgaaaacaact 11783039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 18962501 - 18962579
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    ||||||| ||||| ||||| ||  |||||||| |||||||||||||| ||| ||||| ||||||| |||| || |||||    
T  18962501 ctgtttggattgagttattcgatcttatctactgacataagttttgttagactgttttggagaacttatgaaaccaact 18962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 44917445 - 44917483
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataa 288  Q
    |||||| |||||||||||||||||||||| |||||||||    
T  44917445 tgtttggattgacttatttgagtttatctcccgacataa 44917483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 49020019 - 49019957
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||| |||||||||||  || |||||| | |||||| ||||||||||| |||||||||||||    
T  49020019 gtttggattgacttattgtagcttatctgctgacatatgttttgtgagactgtttgggagaac 49019957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 30748952 - 30749029
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaa 325  Q
    ||||||||||||| ||||||||| |||||||| ||||||||    ||||||| |||||| |||||| |||| ||||||    
T  30748952 ctgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaa 30749029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 278
Target Start/End: Complemental strand, 32157114 - 32157085
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatct 278  Q
    ||||||||||||||||||||||||||||||    
T  32157114 ctgtttgaattgacttatttgagtttatct 32157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 45338602 - 45338541
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||| |||| |||||||||||||||| ||   |||||||||| ||||| |||||||||||||    
T  45338602 tttggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaac 45338541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 341
Target Start/End: Original strand, 11619072 - 11619168
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| |||||| |||| |||||||||| |||||||| |||||||| ||  ||| |  | |||||||||  |||| |||||||| | |||||||||||    
T  11619072 gggtttgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttca 11619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 20234612 - 20234548
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||| |||||||||| |||| |||   |||||||||||||||| | |||||||||||    
T  20234612 ctgtttcaattggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaac 20234548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 25596184 - 25596124
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||| | ||||||||||||| |||||||||  ||||||  ||||||||||||| ||||    
T  25596184 ctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttaggga 25596124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 28691751 - 28691783
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatct 278  Q
    |||||||||| ||||||||||||||||||||||    
T  28691751 ggtctgtttggattgacttatttgagtttatct 28691783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 287
Target Start/End: Complemental strand, 30134286 - 30134246
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacata 287  Q
    ||||||||||||| ||||||||||| |||||||| ||||||    
T  30134286 gtctgtttgaattaacttatttgagcttatctactgacata 30134246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 33128903 - 33128843
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||| ||||||||||||||| |||| | |  || |||||||||| |||||||||||||    
T  33128903 ctgtttggattgacttatttgagcttatatgctaacttaagttttgtaagattgtttggga 33128843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 47046021 - 47046065
Alignment:
Q  244 ggggtctgtttgaattgacttatttgagtttatctaccgacataa 288  Q
    |||||||||||| ||||||||||||| | |||||||| |||||||    
T  47046021 ggggtctgtttggattgacttatttgtgcttatctactgacataa 47046065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 2295248 - 2295156
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||| |||||||||| |||||||| | |||||||||||||||| ||||||||||||| |||| ||||| || | |||||||||||    
T  2295248 ctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttca 2295156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 6102304 - 6102241
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  6102304 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac 6102241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 50644174 - 50644251
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||| ||||||||||||||| ||||||||  ||||| ||||||||||| ||||||||||||| |||| ||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaact 50644251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 341
Target Start/End: Complemental strand, 49938891 - 49938807
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||||||||||| |   | |||||||||||||||||||||||||||||| |||| ||||| || | |||||||||||    
T  49938891 attgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttca 49938807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 33204310 - 33204381
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||||  || |||||||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||    
T  33204310 gtctgtttagatcgacttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatg 33204381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 324
Target Start/End: Complemental strand, 38001734 - 38001672
Alignment:
Q  262 cttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||||||||||||| || |||||||||||||||||| ||||||||||||| |||| |||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaaca 38001672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 3233932 - 3234011
Alignment:
Q  248 tctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||||| ||||||||||||||| |||||||  | | |||||||||||||| |||| |||||||| |||| ||||||||    
T  3233932 tctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaact 3234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 24334345 - 24334284
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||| | |||| |||||    
T  24334345 gtttggattgacttatttgagtttatcaacggacataagttttgtgagactatttgagagaa 24334284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 46504137 - 46504214
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagt-tttgtgagattgtttgggagaacgtatgtaaacaac 326  Q
    |||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| || ||| | |||| |||||||    
T  46504137 tgttggaattgacttatttgagtttatctaccggcataagtatttgtgagactgttcggtagagcttatgaaaacaac 46504214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 39658444 - 39658504
Alignment:
Q  266 tttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaac 326  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||  ||| |||||||    
T  39658444 tttgagcttatccaccgacataagttttgtgagattgattgggagaactcatgaaaacaac 39658504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 39976138 - 39976197
Alignment:
Q  259 tgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||||||||| |||||||| |||||||||||||||| | |||||| |||||| ||||    
T  39976138 tgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatg 39976197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 36514606 - 36514672
Alignment:
Q  261 acttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||||||||||||||||| | |||||||||| ||||| |||| |||||||| |||| ||| ||||    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataact 36514672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 37617384 - 37617446
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||||| |||||||||||||||||||||||  | | |||||||||||||| |||||| |||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaa 37617446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 7028440 - 7028399
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtt 304  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  7028440 ttatttgagcttatctgccgacataagttttgtgagattgtt 7028399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 17009503 - 17009539
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataa 288  Q
    ||||||||||||||||||||||||||||| |||||||    
T  17009503 tttgaattgacttatttgagtttatctactgacataa 17009539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 34952358 - 34952290
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||| |||| |||||||||| |||||||  |  ||||| ||||||||||| |||||||||||    
T  34952358 gggtctgtttggattggcttatttgagcttatctattgggataagatttgtgagattatttgggagaac 34952290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 6292643 - 6292580
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaa 312  Q
    |||||| ||||||||||||||| |||||||| ||||||||   || ||||||||||||||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaa 6292580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 15943110 - 15943027
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagaca 334  Q
    ||||||||| |||||||||||||||| ||  | |||||  ||||||||| ||||| ||||||| |||  |||||||||| ||||    
T  15943110 gtttgaatttacttatttgagtttatatattggcataaactttgtgagactgtttaggagaacatatagaaacaactgatgaca 15943027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 38116003 - 38116058
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||  |||| ||||||    
T  38116003 attgacttatttgagcttatctactgacgtaagttttgtgagacggttttggagaa 38116058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 40413943 - 40414005
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacat-aagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||||||| |||||||| ||   |||| |||||||||||||||||    
T  40413943 tttgaactgacttatttgagtttatcaaccgacatcaacacttgtaagattgtttgggagaac 40414005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 280
Target Start/End: Original strand, 30013995 - 30014028
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctac 280  Q
    ||||||||| ||||||||||||||||||||||||    
T  30013995 gtctgtttggattgacttatttgagtttatctac 30014028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 34303178 - 34303215
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  34303178 tttgaattgacttgtttgagcttatctaccgacataag 34303215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 1510230 - 1510286
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgg 307  Q
    |||||||||| ||||||||||||||| || |  |||||||||||||| | |||||||    
T  1510230 gtttgaattggcttatttgagtttatatatcagcataagttttgtgatactgtttgg 1510286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 7244570 - 7244622
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||| ||| |||||| ||||||||||||||||  || |||||||||||||||    
T  7244570 gtctggttggattgacctatttgagtttatctattgatataagttttgtgaga 7244622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 15784458 - 15784410
Alignment:
Q  260 gacttatttgagtttatctaccgacataagttttgtgagattgtttggg 308  Q
    |||||||||||| ||||||||  ||||||||||||| ||| ||||||||    
T  15784458 gacttatttgagcttatctactaacataagttttgtaagactgtttggg 15784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 281
Target Start/End: Complemental strand, 29793913 - 29793877
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctacc 281  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  29793913 gggtctgtttgaattgacttatttgaatttatttacc 29793877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 52315113 - 52315193
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||  ||||||||    
T  52315113 gtctctttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaact 52315193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 21731574 - 21731666
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| ||||  |||||||||  ||||||| |||||||||||||||||||||||||||||||| |||| ||||| || |  ||||||||||    
T  21731574 ctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttca 21731666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 27043744 - 27043811
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||||||| | ||||||| ||||    
T  27043744 gggtctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaa 27043811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 341
Target Start/End: Complemental strand, 29657527 - 29657444
Alignment:
Q  258 ttgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||| ||| |||||| |||| ||||| || | |||||||||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttca 29657444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 55437228 - 55437150
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    ||||||| |||| ||||||||||||||||||| | |||||||||||||| ||||||||  ||||| |||| ||||||||    
T  55437228 ctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaact 55437150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 311
Target Start/End: Original strand, 15173223 - 15173283
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggaga 311  Q
    ||||| ||||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggaga 15173283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 54426195 - 54426103
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| |||| |||||||||| |||||||| | |||||||||||||||| || |||||||||| || | ||||| || | |||||||||||    
T  54426195 ctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttca 54426103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 39691067 - 39691130
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||||| |||||| |||||    
T  39691067 ctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaa 39691130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 40174701 - 40174634
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| ||| |||| |||||    
T  40174701 attgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaaca 40174634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 41336911 - 41336848
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||||||| ||| || |||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaac 41336848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 310
Target Start/End: Complemental strand, 43506084 - 43506026
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggag 310  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||||| |||| |||||    
T  43506084 tttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggag 43506026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 341
Target Start/End: Original strand, 17822783 - 17822875
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||| ||||||| | ||| ||||||| |||| ||||| || | |||| ||||||    
T  17822783 ctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttca 17822875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 29388766 - 29388702
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||  |||||||||||||  ||||||||  ||||||||||||| |||||||||||||||||    
T  29388766 ctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaac 29388702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 35571545 - 35571613
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||| |||| |||||||||| ||||||||   ||||||||||||| ||| ||||||||||||    
T  35571545 gggtctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaac 35571613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 679447 - 679412
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctac 280  Q
    ||||||||||||||||||||||||||||||||||||    
T  679447 gggtctgtttgaattgacttatttgagtttatctac 679412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 2244207 - 2244140
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||| ||||| ||||  |||||||||||| |||||||||||| ||| | ||||||||||||    
T  2244207 gggtctgtttggattgatttatccgagtttatctactgacataagttttttgaaactgtttgggagaa 2244140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 49940085 - 49940160
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||| ||||||||||||||| ||| || |  ||||||||||||||||| |||||| |||||| |||| |||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaaca 49940160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 41433529 - 41433487
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    |||||||||||||||||||||||||||||||| | ||||||||    
T  41433529 gtctgtttgaattgacttatttgagtttatctcctgacataag 41433487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 324
Target Start/End: Complemental strand, 25571425 - 25571336
Alignment:
Q  235 gttagtcttggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||| || ||| ||||||| |||| ||||||||||||||||||| ||||||||||   ||| | ||||| ||||||| |||| |||||    
T  25571425 gttagttttagggcctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaaca 25571336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 27329994 - 27330083
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattt 338  Q
    |||||||||||| ||||||| || ||||||||  ||||||||||  |||||||||||| ||| |  |||| |||||||| | ||||||||    
T  27329994 ctgtttgaattggcttatttaagcttatctacttacataagtttaatgagattgtttgagaggatttatgaaaacaacttatgacaattt 27330083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 8705093 - 8705029
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| |||| || ||||||| |||||||  |||||||||||||||||| || ||||||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaac 8705029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 13126490 - 13126558
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||| |||| ||||||| || ||| ||||  ||||||||||||||||| ||||||| |||||    
T  13126490 gggtctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaac 13126558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 309
Target Start/End: Complemental strand, 44798032 - 44797972
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||| |||| || |||| || |||||||| |||||||||||||||||| |||||||||    
T  44798032 ctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtttggga 44797972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 280
Target Start/End: Original strand, 7367968 - 7368003
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctac 280  Q
    ||||||||||| ||||||||||||||||||||||||    
T  7367968 gggtctgtttggattgacttatttgagtttatctac 7368003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 24169414 - 24169351
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| |||| |||||| |||||||||||| | |||||||||||||||| | |||| ||||||    
T  24169414 tgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaac 24169351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 296
Target Start/End: Original strand, 42403941 - 42403988
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtg 296  Q
    ||||||| ||||||||||||||| ||||| || |||||||||||||||    
T  42403941 ctgtttggattgacttatttgagcttatcaactgacataagttttgtg 42403988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 312
Target Start/End: Complemental strand, 1706757 - 1706711
Alignment:
Q  266 tttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaa 1706711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 6987660 - 6987722
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagt-tttgtgagattgtttgggaga 311  Q
    |||||| ||||||||| ||||||||||||||   ||||||| ||||||||| |||||||||||    
T  6987660 tgtttgtattgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggaga 6987722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 324
Target Start/End: Original strand, 25904150 - 25904216
Alignment:
Q  258 ttgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||||||||||| ||||| |  ||||||| |||||||||| ||||||||||| | |||| |||||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaaca 25904216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 44862903 - 44862965
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    |||||| |||| | |||||||| || ||||| | || ||||||||||||||||||||||||||    
T  44862903 tgtttggattggcatatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaa 44862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 19305075 - 19305014
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaa 312  Q
    |||| ||||||||||||||| |||||||  ||||||||  ||||||||||||| ||||||||    
T  19305075 tttggattgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaa 19305014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 341
Target Start/End: Complemental strand, 22030352 - 22030263
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| ||||||||||||||| || ||||    |||||||||||||||  | ||||||||||| |||| ||||| || | |||||||||||    
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttca 22030263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 318
Target Start/End: Complemental strand, 29774392 - 29774323
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||| | |||||||||||||||||| ||| |||   |||||||||||| ||||| ||||||| ||||    
T  29774392 ctgtttggaatgacttatttgagtttatttactgactagagttttgtgagactgtttaggagaacttatg 29774323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 40613322 - 40613289
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccga 283  Q
    ||||| ||||||||||||||||||||||||||||    
T  40613322 tgtttcaattgacttatttgagtttatctaccga 40613289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 1133084 - 1133044
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgaca 285  Q
    |||| |||||||||||||||||||||| |||||||| ||||    
T  1133084 gggtgtgtttgaattgacttatttgagcttatctactgaca 1133044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 18815175 - 18815111
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| |||| |||||||||| ||| ||||   |||||||||||||||| |||||| ||||||    
T  18815175 ctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaac 18815111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 22662169 - 22662209
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||| ||||||||||||||||||||||||  |||||||    
T  22662169 ctgtttggattgacttatttgagtttatctactaacataag 22662209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 22666648 - 22666688
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||| ||||||||||||||||||||||||  |||||||    
T  22666648 ctgtttggattgacttatttgagtttatctactaacataag 22666688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 26590680 - 26590636
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||||||| ||||| ||||||||||||||||||  |||||||    
T  26590680 gggtctgtttggattgaattatttgagtttatctacttacataag 26590636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 25447161 - 25447220
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttg 306  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  25447161 gtctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 20257689 - 20257596
Alignment:
Q  249 ctgtttgaattgacttatttgagttt-atctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| |||| ||||||||||||| |||||| | ||||| |||||||||| ||||||||||||| |||| || || || | |||||||||||    
T  20257689 ctgtttggattggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttca 20257596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 21367821 - 21367744
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| |||| |||| |||||||||| |||||||||  ||||||||||||| || ||||||||||||| |||| |||||    
T  21367821 gtctctttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaaca 21367744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Original strand, 24085258 - 24085331
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||| |||| |||||||||| |||||||||| |||||||||||||||| || || ||||||| |||| |||||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaaca 24085331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 30657443 - 30657398
Alignment:
Q  244 ggggtctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  30657443 ggggtctgtttgaattgatttatttgagtttatctactgacataag 30657398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 31365114 - 31365198
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| |||||||||| |||||||  | |||||||||||||||| ||||||||||||| |||| || || || | |||||||||||    
T  31365114 attggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttca 31365198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 402460 - 402535
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||||  ||||| |||||||||||||| ||  ||||||||||||  ||| |||||||||||||||||| |||||    
T  402460 ctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaaca 402535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 313
Target Start/End: Original strand, 26990144 - 26990207
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||| |||||||| |||||| | |||| || |||||||||||||||    
T  26990144 tgtttggattgacttatttgagcttatctactgacataggctttgcgatattgtttgggagaac 26990207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 33405118 - 33405160
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  33405118 attgacttatttgagtttatctactgacataagttttgggaga 33405160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 42747700 - 42747778
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||||  |||||||||||||||||||||||   ||||||| |||||||| |||||  |||||| |||| ||||||||    
T  42747700 ctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaact 42747778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 18405763 - 18405824
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||  ||||| |||| |||||    
T  18405763 ttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaaca 18405824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 26911740 - 26911699
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagtttt 293  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  26911740 tttggattgacttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 36783281 - 36783334
Alignment:
Q  260 gacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||||||||||   | ||||||||||||||| |||||||||||||    
T  36783281 gacttatttgagtttatctattaatataagttttgtgagactgtttgggagaac 36783334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 16072959 - 16073007
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtga 297  Q
    ||||||| ||||||||||||||| |||||||  ||||||||||||||||    
T  16072959 ctgtttggattgacttatttgagcttatctaatgacataagttttgtga 16073007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 31365235 - 31365319
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| ||||||||||||||||||  | ||||| |||||||| | ||||||||||||| |||| | ||| || | |||||||||||    
T  31365235 attggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttca 31365319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 324
Target Start/End: Original strand, 42799884 - 42799960
Alignment:
Q  249 ctgtttgaattgacttatttgag-tttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||| |||| |||||||||| ||||||||| |||||| ||||||||| | | ||||||||||| |||| |||||    
T  42799884 ctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 50946201 - 50946261
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttg 306  Q
    |||||||||| | |||||||||||||||||||| |  ||||||| ||||||| ||||||||    
T  50946201 ggtctgtttggaatgacttatttgagtttatctcctaacataagatttgtgatattgtttg 50946261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 281
Target Start/End: Complemental strand, 28779470 - 28779439
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctacc 281  Q
    ||||||||||||||||||||||||||||||||    
T  28779470 tgtttgaattgacttatttgagtttatctacc 28779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 36507007 - 36507073
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacata--agttttgtgagattgtttgggag 310  Q
    |||||||||| |||| ||||||||||||||||||| || |||  || ||||||||| ||||||||||    
T  36507007 ggtctgtttggattggcttatttgagtttatctactgatataagagctttgtgagactgtttgggag 36507073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 324
Target Start/End: Complemental strand, 39980885 - 39980806
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    ||||||||||| |||| ||| |||||| ||||||||   |||||||||||||||| |||||  |||||| |||| |||||    
T  39980885 gggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaaca 39980806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 43875622 - 43875587
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctac 280  Q
    |||| |||||||||||||||||||||||||||||||    
T  43875622 gggtttgtttgaattgacttatttgagtttatctac 43875587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 31615469 - 31615515
Alignment:
Q  240 tcttggggtctgtttgaattgacttatttgagtttatctaccgacat 286  Q
    |||| |||| |||||| |||||||||||||||||||||||| |||||    
T  31615469 tcttagggtatgtttggattgacttatttgagtttatctacggacat 31615515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 37389311 - 37389257
Alignment:
Q  273 ttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||||| |||||||||||||||||| | || |||||||| |||| ||||||||    
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaact 37389257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 312
Target Start/End: Complemental strand, 584196 - 584135
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||| ||||||||||||||| ||||||||   |||||||| ||||||| ||||| ||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaa 584135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 20170632 - 20170689
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttg 306  Q
    ||||||| |||| |||||||||| |||||||  ||||||||||| |||||| ||||||    
T  20170632 ctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttg 20170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 32582888 - 32582828
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||||||||||||||||   ||||||||||   ||| |||||||||||||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtttt---agactgtttgggagaac 32582828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 33046717 - 33046762
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgt 295  Q
    ||||||||||| ||||||| ||||||||||| | ||||||||||||    
T  33046717 tgtttgaattggcttattttagtttatctactggcataagttttgt 33046762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 34610725 - 34610770
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgt 295  Q
    |||||| || |||||||||||| |||||||| ||||||||||||||    
T  34610725 tgtttgtatggacttatttgagcttatctactgacataagttttgt 34610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 341
Target Start/End: Original strand, 22892 - 22976
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| |||||||||  || ||||| | |||||||||||||||||||||| ||||||  |||| ||||| || | || ||||||||    
T  22892 attggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagcttacgataattttca 22976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 313
Target Start/End: Original strand, 9832681 - 9832737
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||||| |||| ||  |||||||||||||| | | |||||||||||||    
T  9832681 attgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaac 9832737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 280
Target Start/End: Complemental strand, 11253654 - 11253622
Alignment:
Q  248 tctgtttgaattgacttatttgagtttatctac 280  Q
    |||||||||||||||||||||||| ||||||||    
T  11253654 tctgtttgaattgacttatttgagattatctac 11253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 24684741 - 24684829
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattt 338  Q
    |||||| ||| ||||||||||| |||||||| | |||||||||| |||||   |||||  |||| |||| |||||||| | ||||||||    
T  24684741 tgtttggattaacttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgacaattt 24684829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 26878352 - 26878288
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||||||| |||||| ||| |||||||| ||||||||||  |||| | |||||| ||||||    
T  26878352 ctgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaac 26878288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 32663794 - 32663754
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgaca 285  Q
    ||||||||||| |||| |||||||||| |||||||||||||    
T  32663794 gggtctgtttggattggcttatttgagcttatctaccgaca 32663754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 277
Target Start/End: Original strand, 47903994 - 47904026
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatc 277  Q
    ||||||||||| |||||||||||||||||||||    
T  47903994 gggtctgtttggattgacttatttgagtttatc 47904026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 53493843 - 53493907
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| ||||| || |||||| |||||||   ||||||||||||  |||||||||||||||||    
T  53493843 ctgtttggattgatttgtttgagcttatctaattacataagttttgcaagattgtttgggagaac 53493907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 318
Target Start/End: Complemental strand, 1096641 - 1096573
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    |||||| |||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||    
T  1096641 tgtttggattgacttatttgagtttatttagtgacataagttttgtgagattttttgggagaacatatg 1096573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 38602479 - 38602415
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||    
T  38602479 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaac 38602415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 240 - 327
Target Start/End: Original strand, 32840895 - 32840982
Alignment:
Q  240 tcttggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| |||||| |||||||||||||| ||||| ||||||||  ||| |||||||| |||| ||||||||||||| |||| ||||||||    
T  32840895 tcttagggtctatttgaattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaact 32840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 36963266 - 36963336
Alignment:
Q  243 tggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||| |||| |||||||||| | |||||| | |||||||||||||||| |||||||||||||    
T  36963266 tggggtctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaac 36963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 318
Target Start/End: Original strand, 1074187 - 1074255
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    |||||| |||||||||||||||||||| |||  | ||||||||||||||||| || |||||||||||||    
T  1074187 tgtttggattgacttatttgagtttatttactcatataagttttgtgagatttttcgggagaacgtatg 1074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 30251372 - 30251436
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| |||| |||||||||| |||||||| ||||||||||| |||||| |||||||||||||    
T  30251372 ctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaac 30251436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 1057997 - 1058059
Alignment:
Q  251 gtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| || |||||||||| ||||||||  ||||||||||||||||| |||||||||||||    
T  1057997 gtttgaactggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaac 1058059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 6950466 - 6950396
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagt-tttgtgagattgtttgggagaacgtatgtaaacaac 326  Q
    |||||||||||||||||||||||| | |||||   ||||||||||||||||||||| | ||||||||||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaac 6950396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 341
Target Start/End: Complemental strand, 26771403 - 26771325
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||| |||| |||||||| | |||||||||||||||| ||||||||||||| |||| ||||| || | |||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttca 26771325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 42893402 - 42893472
Alignment:
Q  243 tggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||| |||||||| ||| |||||||||||||||||||||| ||||| |||||||  | |||||||||||||    
T  42893402 tgggctctgtttggattaacttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaac 42893472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 26215615 - 26215542
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||||||| ||||||||||||||  |||| |||  ||  ||||||||||||||||||||||||||| ||||    
T  26215615 gggtctgtttggattgacttatttgaacttatttacaaacgcaagttttgtgagattgtttgggagaacttatg 26215542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 339
Target Start/End: Original strand, 35534524 - 35534621
Alignment:
Q  242 ttggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaatttt 339  Q
    |||||| ||||||  | ||||||||||||| ||||||||  ||||||||||||||||| |||||| |||||| | || ||||| || | |||||||||    
T  35534524 ttggggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaatttt 35534621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 252 - 324
Target Start/End: Original strand, 43717855 - 43717927
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| |||| |||||||||| |||||||  |||||||||||||||||| | ||||||||||| |||| |||||    
T  43717855 tttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaaca 43717927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 341
Target Start/End: Original strand, 10758176 - 10758267
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||||||||||||  |||||| |  ||||||||||||||||| ||||||  ||||  |||| ||||| || | |||||||||||    
T  10758176 tgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttca 10758267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 312
Target Start/End: Complemental strand, 27028971 - 27028920
Alignment:
Q  261 acttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||||||||||||| || | ||||||||| |||||||||||||||||||    
T  27028971 acttatttgagtttatccactggcataagtttagtgagattgtttgggagaa 27028920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 38648495 - 38648428
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||| ||||||| || |||||||| |||||||||||||||||| ||||||||||| | |||| |||||    
T  38648495 attggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaaca 38648428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 2487927 - 2488005
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||||| |||| |||||||||||| |||||| ||||||||   |||||||| ||||||||||||| |||| ||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaact 2488005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 15247695 - 15247745
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    |||||||| ||||||||||||| |||||||||  |||||||||||||||||    
T  15247695 ctgtttgatttgacttatttgaatttatctacttacataagttttgtgaga 15247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 922320 - 922385
Alignment:
Q  245 gggtctgtttgaatt-gacttatttgagtttatctaccgacataagttttgtgagattgtttggga 309  Q
    ||||||||||| ||| ||||||||||||||||| ||| ||| |||||||||||| | |||||||||    
T  922320 gggtctgtttggattagacttatttgagtttatatactgacctaagttttgtgatactgtttggga 922385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 6525961 - 6525900
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    |||| |||||||||||||||||||  |||||||||||||| || ||||||||| ||| ||||    
T  6525961 attgtcttatttgagtttatctactaacataagttttgtgtgactgtttgggaaaacttatg 6525900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 14280339 - 14280416
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaa 325  Q
    ||||||| |||||||||||||| ||||||||| | |||||| ||||||| ||||||||||| |||  |||| ||||||    
T  14280339 ctgtttggattgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaa 14280416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 18930850 - 18930797
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    |||||||||| ||||||||||||||||||| ||| || ||| ||||||||||||    
T  18930850 ggtctgtttggattgacttatttgagtttacctaacggcatgagttttgtgaga 18930797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 7008750 - 7008710
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    |||||||||||||||||||||||||||||||| | ||||||    
T  7008750 ctgtttgaattgacttatttgagtttatctactggcataag 7008710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 30657696 - 30657760
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacg 314  Q
    |||||| || ||||||||||||||||||||  ||||||| |||||||||| |||||  |||||||    
T  30657696 tgtttggatcgacttatttgagtttatctaatgacataaattttgtgagactgtttatgagaacg 30657760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 1892138 - 1892201
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagtt-ttgtgagattgtttgg 307  Q
    ||||||||||  |||||||||||||||||||||||||| |||||    ||||||||||||||||    
T  1892138 gggtctgtttagattgacttatttgagtttatctaccgtcataaacacttgtgagattgtttgg 1892201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 280
Target Start/End: Complemental strand, 10727500 - 10727465
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctac 280  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10727500 gggtctgtttggattgacttatttgagtttatctac 10727465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 6882046 - 6882004
Alignment:
Q  282 gacataagttttgtgagattgtttgggagaacgtatgtaaaca 324  Q
    |||||||||||||||||| ||||||||||||| |||| |||||    
T  6882046 gacataagttttgtgagactgtttgggagaacctatgaaaaca 6882004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 15180691 - 15180641
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||||| |||| ||||||||||||||||||| | |||||||||| |||||    
T  15180691 ctgtttggattggcttatttgagtttatctactgccataagttttatgaga 15180641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 28763486 - 28763428
Alignment:
Q  283 acataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||||||||||||| ||||||||||||| |||| ||||| || |  ||||||||||    
T  28763486 acataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttca 28763428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 40357087 - 40357049
Alignment:
Q  242 ttggggtctgtttgaattgacttatttgagtttatctac 280  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  40357087 ttggggtctgtttggattgatttatttgagtttatctac 40357049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 41336556 - 41336598
Alignment:
Q  247 gtctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||    
T  41336556 gtctgattgaattgacttgtttgagtttatctaccgccataag 41336598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 12496993 - 12497054
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||| ||||| ||||||||| |||||| | | |||||||||||||||| |||||| ||||||    
T  12496993 tttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaac 12497054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 900629 - 900693
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||  ||||||||| |||| ||| |||||| ||||||||||| || || |||||||    
T  900629 ctgtttgaattggtttatttgagcttatatactgacatatgttttgtgagactgattaggagaac 900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 1930163 - 1930123
Alignment:
Q  273 ttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  1930163 ttatctactgacataagttttgtgacattatttgggagaac 1930123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 8407794 - 8407738
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgttt 305  Q
    ||||||| ||| || |||||||||||||||| || |||| ||||||||||| |||||    
T  8407794 ctgtttggattcacatatttgagtttatctagcggcataggttttgtgagactgttt 8407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 16915833 - 16915877
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgagatt 301  Q
    ||||| ||||||||||||||||||  |||||| ||||||||||||    
T  16915833 attgatttatttgagtttatctacttacataaattttgtgagatt 16915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 18591890 - 18591958
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||||||||||  ||| ||||| |||||||  |  ||||||||| ||||| |||||||||||||    
T  18591890 gggtctgtttgaattggtttaattgagcttatctattggtataagttttatgagactgtttgggagaac 18591958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 32213271 - 32213219
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagatt 301  Q
    ||||||| |||| |||||||||| |||| ||| || |||||||||||||||||    
T  32213271 ctgtttggattgtcttatttgagcttatatactgatataagttttgtgagatt 32213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 39551130 - 39551206
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| ||||||||||||||| |||||||| || |||||  ||||||| | ||||||||||||  |||| ||||||||    
T  39551130 tttggattgacttatttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaact 39551206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 21405061 - 21405136
Alignment:
Q  238 agtcttggggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    |||||| ||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||| | |||||| ||||    
T  21405061 agtcttagggtctgtttggattgacttatttgagcttatatactgacataagttttgtgagaatatttgggggaac 21405136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 31623706 - 31623610
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||| |||| | |||||||||||| | || ||| | || | |||||||||||    
T  31623706 gggtctgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatgacaattttca 31623610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 10645299 - 10645381
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| |||||| |||| || ||||||| |||||||  |||||||||||||| ||| ||||||||||||| |||| ||||||||    
T  10645299 gggtatgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaacaact 10645381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 318
Target Start/End: Original strand, 34404644 - 34404713
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatg 318  Q
    ||||||| ||| ||||||||||||||||| || ||||||||||||||| || | ||||||||||| ||||    
T  34404644 ctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatg 34404713  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 7351586 - 7351646
Alignment:
Q  246 ggtctgtttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgttt 305  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  7351586 ggtctgtttaaattgacttatttgagtttatctactgacataagcacttgtgagattgttt 7351646  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 34430866 - 34430775
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaacgtatgtaaacaactgaagacaattttca 341  Q
    ||||||| |||| |||||||||| ||||| || || ||||||||||| ||||||||||||| ||  |||| |||||||| | |||||||||||    
T  34430866 ctgtttggattggcttatttgagcttatcaactga-ataagttttgtaagattgtttgggataatttatgaaaacaacttatgacaattttca 34430775  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 34910327 - 34910390
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaa 312  Q
    ||||||| | || ||||||||||||||||||| || || ||||||| |||||||||||| ||||    
T  34910327 ctgtttggactggcttatttgagtttatctactgatatcagttttgggagattgtttggaagaa 34910390  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 35069530 - 35069585
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtt 304  Q
    ||||||| |||| |||||||||| |||||||| |||||||||||||| ||| ||||    
T  35069530 ctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 2455126 - 2455076
Alignment:
Q  263 ttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||||  ||||||||  ||||||||||||||||| |||||||||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaac 2455076  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 30536878 - 30536924
Alignment:
Q  244 ggggtctgtttgaattgacttatttgagtttatctaccgacataagt 290  Q
    |||| ||||||| ||||||||||||||||||||||||  ||||||||    
T  30536878 ggggcctgtttggattgacttatttgagtttatctacttacataagt 30536924  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 32729069 - 32729111
Alignment:
Q  257 attgacttatttgagtttatctaccgacataagttttgtgaga 299  Q
    ||||||||||||||||||||||||  || ||||||||||||||    
T  32729069 attgacttatttgagtttatctacaaacttaagttttgtgaga 32729111  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 848140 - 848077
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| |||| |||||||||| |||||||  | |||||||||||||||| ||||||| |||||    
T  848140 ctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaac 848077  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 2455958 - 2455922
Alignment:
Q  253 ttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  2455958 ttgaattgacttatttgagcttatctaccggcataag 2455922  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 2457093 - 2457053
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataag 289  Q
    ||||||| |||| |||||||||| |||||||||||||||||    
T  2457093 ctgtttggattggcttatttgagattatctaccgacataag 2457053  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 273
Target Start/End: Original strand, 6310166 - 6310194
Alignment:
Q  245 gggtctgtttgaattgacttatttgagtt 273  Q
    |||||||||||||||||||||||||||||    
T  6310166 gggtctgtttgaattgacttatttgagtt 6310194  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 24982857 - 24982793
Alignment:
Q  249 ctgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggagaac 313  Q
    ||||||| ||||||| ||| ||  ||||||||  ||||||||||||||||| ||||| |||||||    
T  24982857 ctgtttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaac 24982793  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 252 - 327
Target Start/End: Original strand, 26559160 - 26559236
Alignment:
Q  252 tttgaattgacttatttgagtttatctaccgacataag-ttttgtgagattgtttgggagaacgtatgtaaacaact 327  Q
    |||| ||| ||||||||||||||| |||| | ||||||  ||||||||| ||||||| ||||| |||| ||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaact 26559236  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 33832 - 33893
Alignment:
Q  250 tgtttgaattgacttatttgagtttatctaccgacataagttttgtgagattgtttgggaga 311  Q
    ||||| ||||||||||||||| ||||||||| |||||||| | | ||||||||||| |||||    
T  33832 tgtttaaattgacttatttgaatttatctactgacataagctctttgagattgtttaggaga 33893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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