View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_high_54 (Length: 235)
Name: NF13926_high_54
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_high_54 |
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Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 30432952 - 30433172
Alignment:
| Q |
5 |
cctatagttaattgaaaccaccaactattaattcacaccatattggaatcaaaatgtgtggactcatatagtaggtgtaggactacttagactcccatga |
104 |
Q |
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| T |
30432952 |
cctatagttaattgaaaccaccaactattaattcacaccatattggaattaaaatgtgtggattcatatagtaggtgtaggactacttagactcccatga |
30433051 |
T |
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| Q |
105 |
agatactttatattttgcccctatagttattttgattctttgaggaactaaaagacttatatttaattgttattgcaaaagacaaatatagtaaa---ta |
201 |
Q |
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| T |
30433052 |
acatactttatattttgcccctatagttattttgattctttgaggaactaaaagacttatatttaactgttattgcaaaagacaaatatagcaaatagta |
30433151 |
T |
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| Q |
202 |
gtatagtttgtccttatattt |
222 |
Q |
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||||||||||||||||||||| |
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| T |
30433152 |
gtatagtttgtccttatattt |
30433172 |
T |
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