View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_low_21 (Length: 429)
Name: NF13926_low_21
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 408; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 1 - 420
Target Start/End: Original strand, 15628814 - 15629233
Alignment:
| Q |
1 |
attatctagttaaatgtacattattttctttagactttagtttaaactaaaattgtttaaattggaaatttcgcagacgattattactcagtactcaagc |
100 |
Q |
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| T |
15628814 |
attatctagttaaatgtacattattttctttagactttagtttaaactaaaattgtttaaattggaaatttcgcagacgattattactcagtactcaagc |
15628913 |
T |
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| Q |
101 |
aaattggctaaagtatttggaaaatcaagtggtggaagtggaaagcttaaagtaatatttcatgattttccaggaggtgcagaaggttttgagcttatgt |
200 |
Q |
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| T |
15628914 |
aaattggctaaagtatttggaaaatcaagtggtggaagtggaaagcttaaagtaatatttcatgattttccaggaggtgcagaaggttttgagcttatgt |
15629013 |
T |
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| Q |
201 |
taagattctgttataacaatggaaaaggtaatttaagtccttcgaatctgttactcgcgcgttgtgctgctgaatacatggaaatgaatgaatctgtcaa |
300 |
Q |
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| T |
15629014 |
taagattctgttataacaatggaaaaggtaatttaagtccttcgaatctgttactcgcgcgttatgctgctgaatacatggaaatgaatgaatctgtcaa |
15629113 |
T |
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| Q |
301 |
aaatgtttctaacttattggatcaaactgagaaatctgttcaagggattagttattggtcatggtcagaaattttgattgctttgaagcaatgccagaat |
400 |
Q |
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| T |
15629114 |
aaatgtttctaacttattggatcaaactgagaaatctgttcaagggattagttattggtcatggtcagaaattttgattactttgaagcaatgccagaat |
15629213 |
T |
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| Q |
401 |
ttgttagtcgatgattcttc |
420 |
Q |
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| T |
15629214 |
ttgttagttgatgattcttc |
15629233 |
T |
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