View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13926_low_24 (Length: 415)

Name: NF13926_low_24
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13926_low_24
NF13926_low_24
[»] chr4 (77 HSPs)
chr4 (14-399)||(27735617-27736015)
chr4 (143-345)||(54935070-54935274)
chr4 (143-333)||(45741893-45742083)
chr4 (143-342)||(31348363-31348562)
chr4 (143-367)||(46007715-46007942)
chr4 (143-321)||(26166940-26167118)
chr4 (143-333)||(54320438-54320627)
chr4 (143-345)||(5730869-5731072)
chr4 (143-299)||(1968445-1968600)
chr4 (159-345)||(49735507-49735692)
chr4 (143-283)||(37711141-37711286)
chr4 (143-366)||(47433725-47433950)
chr4 (143-345)||(29798291-29798490)
chr4 (142-327)||(16400802-16400987)
chr4 (192-345)||(35248738-35248891)
chr4 (143-346)||(2247841-2248042)
chr4 (192-333)||(41174397-41174538)
chr4 (143-333)||(36151579-36151768)
chr4 (143-281)||(56135752-56135890)
chr4 (153-333)||(6891373-6891553)
chr4 (159-345)||(24565385-24565569)
chr4 (143-299)||(45132586-45132736)
chr4 (146-333)||(17938158-17938346)
chr4 (145-367)||(34110803-34111032)
chr4 (186-333)||(44784038-44784184)
chr4 (186-327)||(28332850-28332991)
chr4 (197-284)||(2917063-2917150)
chr4 (143-275)||(17182594-17182726)
chr4 (143-275)||(22920984-22921117)
chr4 (143-275)||(22970682-22970815)
chr4 (143-278)||(7977602-7977738)
chr4 (143-278)||(47846161-47846297)
chr4 (144-278)||(55510173-55510308)
chr4 (143-212)||(49735471-49735540)
chr4 (143-212)||(54320606-54320675)
chr4 (143-212)||(54935241-54935310)
chr4 (143-269)||(21695004-21695129)
chr4 (143-278)||(22186722-22186857)
chr4 (175-278)||(43961445-43961548)
chr4 (146-219)||(6938287-6938360)
chr4 (143-228)||(6938403-6938488)
chr4 (197-278)||(34995108-34995189)
chr4 (143-212)||(37711295-37711364)
chr4 (143-275)||(51329799-51329930)
chr4 (143-367)||(55080582-55080807)
chr4 (143-278)||(37761468-37761602)
chr4 (143-228)||(27735901-27735986)
chr4 (143-251)||(31719966-31720072)
chr4 (191-279)||(23813152-23813240)
chr4 (179-278)||(18516577-18516675)
chr4 (287-345)||(6938394-6938452)
chr4 (143-212)||(5730833-5730902)
chr4 (161-278)||(29993877-29993994)
chr4 (143-212)||(41174517-41174586)
chr4 (148-212)||(17938115-17938179)
chr4 (245-333)||(36278356-36278444)
chr4 (143-278)||(47846369-47846504)
chr4 (236-279)||(41227576-41227619)
chr4 (143-189)||(49735687-49735733)
chr4 (225-278)||(14539357-14539410)
chr4 (159-212)||(21694909-21694962)
chr4 (231-327)||(34108283-34108379)
chr4 (143-212)||(45742062-45742131)
chr4 (146-278)||(47694355-47694487)
chr4 (143-212)||(54576330-54576399)
chr4 (143-211)||(24565349-24565417)
chr4 (160-212)||(31348341-31348393)
chr4 (232-275)||(11842399-11842442)
chr4 (199-281)||(54001206-54001289)
chr4 (235-278)||(54745011-54745054)
chr4 (195-278)||(56427006-56427088)
chr4 (176-226)||(2247839-2247889)
chr4 (199-273)||(5307067-5307140)
chr4 (296-333)||(45911331-45911368)
chr4 (152-276)||(8347212-8347336)
chr4 (148-212)||(35248858-35248922)
chr4 (225-261)||(54494723-54494759)
[»] chr2 (74 HSPs)
chr2 (143-339)||(36347586-36347782)
chr2 (159-367)||(39821688-39821897)
chr2 (143-333)||(15224745-15224935)
chr2 (143-367)||(39732745-39732969)
chr2 (179-345)||(23748134-23748300)
chr2 (143-344)||(19566860-19567057)
chr2 (145-346)||(8426917-8427110)
chr2 (143-333)||(36566901-36567093)
chr2 (143-345)||(36046243-36046442)
chr2 (143-333)||(9426988-9427179)
chr2 (197-333)||(16565832-16565970)
chr2 (143-266)||(35736178-35736301)
chr2 (143-323)||(12541773-12541949)
chr2 (146-333)||(31795820-31796002)
chr2 (185-327)||(28262500-28262642)
chr2 (143-284)||(2241414-2241554)
chr2 (225-322)||(17379897-17379994)
chr2 (142-333)||(34209463-34209657)
chr2 (143-274)||(41841685-41841816)
chr2 (143-273)||(41778776-41778906)
chr2 (197-345)||(40022427-40022578)
chr2 (239-367)||(42316781-42316909)
chr2 (149-275)||(886927-887051)
chr2 (143-278)||(31061362-31061497)
chr2 (191-328)||(37739949-37740085)
chr2 (147-343)||(9631565-9631763)
chr2 (186-346)||(29525767-29525931)
chr2 (191-345)||(7681299-7681449)
chr2 (143-275)||(45257310-45257442)
chr2 (143-278)||(16713495-16713630)
chr2 (286-367)||(1583223-1583305)
chr2 (186-280)||(6721726-6721820)
chr2 (211-333)||(12751885-12752008)
chr2 (177-327)||(39354231-39354381)
chr2 (147-279)||(31928149-31928286)
chr2 (213-346)||(32503232-32503365)
chr2 (255-335)||(27926668-27926748)
chr2 (143-278)||(3094459-3094594)
chr2 (143-278)||(42296409-42296544)
chr2 (143-212)||(17380013-17380082)
chr2 (143-261)||(34187578-34187696)
chr2 (197-246)||(9591973-9592022)
chr2 (143-212)||(22356176-22356245)
chr2 (143-212)||(23748267-23748336)
chr2 (143-212)||(36046207-36046276)
chr2 (143-278)||(2381093-2381228)
chr2 (148-275)||(33265615-33265741)
chr2 (143-228)||(9427142-9427227)
chr2 (221-278)||(45098250-45098307)
chr2 (160-212)||(8426899-8426951)
chr2 (143-195)||(17379849-17379901)
chr2 (146-201)||(31061543-31061598)
chr2 (224-279)||(35325353-35325408)
chr2 (197-274)||(15085810-15085888)
chr2 (225-279)||(18811413-18811467)
chr2 (230-279)||(20545799-20545848)
chr2 (196-278)||(21502087-21502171)
chr2 (197-261)||(22356022-22356086)
chr2 (143-211)||(36347544-36347612)
chr2 (191-278)||(44966635-44966720)
chr2 (143-234)||(40022523-40022614)
chr2 (197-278)||(1052861-1052943)
chr2 (159-228)||(887266-887335)
chr2 (147-267)||(1270394-1270515)
chr2 (143-212)||(9631732-9631801)
chr2 (225-270)||(21662323-21662368)
chr2 (143-212)||(31795772-31795841)
chr2 (143-212)||(35736359-35736428)
chr2 (234-278)||(887210-887254)
chr2 (144-212)||(2241590-2241658)
chr2 (174-246)||(14196808-14196879)
chr2 (313-345)||(22356177-22356209)
chr2 (164-212)||(36566874-36566922)
chr2 (143-211)||(45257480-45257548)
[»] chr7 (77 HSPs)
chr7 (143-344)||(33655148-33655349)
chr7 (143-333)||(24970216-24970406)
chr7 (169-333)||(41497008-41497172)
chr7 (143-345)||(1051539-1051739)
chr7 (143-333)||(47390858-47391049)
chr7 (143-274)||(39855975-39856106)
chr7 (185-333)||(34235058-34235207)
chr7 (142-333)||(43230238-43230428)
chr7 (143-328)||(13771004-13771187)
chr7 (143-332)||(25887195-25887385)
chr7 (184-344)||(40196572-40196732)
chr7 (143-321)||(34228381-34228560)
chr7 (143-372)||(40572246-40572474)
chr7 (182-333)||(42306376-42306523)
chr7 (179-367)||(17852910-17853098)
chr7 (179-311)||(37417706-37417838)
chr7 (146-332)||(41008188-41008375)
chr7 (221-327)||(22163167-22163272)
chr7 (221-327)||(22221875-22221980)
chr7 (143-283)||(31571569-31571711)
chr7 (143-333)||(26365770-26365961)
chr7 (212-345)||(4833570-4833703)
chr7 (145-278)||(33519053-33519186)
chr7 (186-335)||(42087041-42087190)
chr7 (205-333)||(45940707-45940835)
chr7 (226-335)||(10315719-10315828)
chr7 (143-278)||(37925844-37925979)
chr7 (247-333)||(18231693-18231779)
chr7 (143-212)||(42306502-42306571)
chr7 (146-335)||(48151990-48152175)
chr7 (143-278)||(18795701-18795835)
chr7 (231-340)||(13425164-13425273)
chr7 (143-275)||(36267662-36267794)
chr7 (143-278)||(37620777-37620912)
chr7 (224-278)||(18063667-18063721)
chr7 (224-367)||(23116275-23116420)
chr7 (174-278)||(19261945-19262048)
chr7 (142-238)||(23029480-23029571)
chr7 (224-367)||(48093977-48094121)
chr7 (226-333)||(32872832-32872939)
chr7 (146-208)||(4833537-4833599)
chr7 (142-278)||(21857349-21857485)
chr7 (143-211)||(36267556-36267624)
chr7 (143-227)||(40196535-40196619)
chr7 (159-278)||(48013522-48013641)
chr7 (236-279)||(18127347-18127390)
chr7 (232-279)||(20393693-20393740)
chr7 (191-278)||(38378096-38378183)
chr7 (143-212)||(13770951-13771020)
chr7 (143-208)||(18231762-18231827)
chr7 (143-212)||(41496960-41497029)
chr7 (143-212)||(47391028-47391097)
chr7 (143-212)||(48881561-48881630)
chr7 (179-239)||(10315652-10315712)
chr7 (146-206)||(40282203-40282263)
chr7 (143-278)||(39646472-39646607)
chr7 (213-333)||(30891045-30891165)
chr7 (159-212)||(1051519-1051572)
chr7 (143-212)||(28074106-28074175)
chr7 (143-208)||(33519224-33519289)
chr7 (197-278)||(35422021-35422102)
chr7 (243-328)||(47229888-47229973)
chr7 (224-275)||(3143564-3143615)
chr7 (223-278)||(7791802-7791857)
chr7 (191-278)||(37929919-37930005)
chr7 (232-278)||(12670942-12670988)
chr7 (143-208)||(13425123-13425188)
chr7 (159-209)||(25887368-25887418)
chr7 (232-274)||(28074213-28074255)
chr7 (150-212)||(35422136-35422198)
chr7 (240-278)||(37562736-37562774)
chr7 (143-208)||(30592256-30592321)
chr7 (231-279)||(16833786-16833834)
chr7 (197-266)||(26079975-26080046)
chr7 (197-266)||(26103762-26103833)
chr7 (230-278)||(33519401-33519449)
chr7 (180-212)||(33655148-33655180)
[»] scaffold0067 (2 HSPs)
scaffold0067 (143-345)||(39226-39431)
scaffold0067 (143-212)||(39189-39259)
[»] chr5 (73 HSPs)
chr5 (143-333)||(7544139-7544329)
chr5 (143-333)||(13634714-13634904)
chr5 (143-345)||(16938482-16938684)
chr5 (143-333)||(26414896-26415086)
chr5 (144-367)||(10072663-10072887)
chr5 (143-333)||(4373617-4373807)
chr5 (143-333)||(28279527-28279718)
chr5 (145-339)||(36363037-36363231)
chr5 (179-332)||(9856919-9857072)
chr5 (145-367)||(36392167-36392388)
chr5 (144-311)||(11756882-11757048)
chr5 (144-345)||(2550391-2550592)
chr5 (143-333)||(20146917-20147111)
chr5 (202-345)||(8502874-8503017)
chr5 (185-333)||(37606940-37607087)
chr5 (143-333)||(16501841-16502033)
chr5 (186-333)||(9798663-9798810)
chr5 (143-328)||(10476029-10476216)
chr5 (185-333)||(37779150-37779296)
chr5 (143-305)||(42681451-42681618)
chr5 (142-283)||(14681472-14681612)
chr5 (143-265)||(22022850-22022975)
chr5 (215-333)||(17024275-17024393)
chr5 (143-261)||(40815300-40815417)
chr5 (185-333)||(37551453-37551598)
chr5 (185-333)||(37654283-37654428)
chr5 (143-278)||(34980813-34980948)
chr5 (143-333)||(20513496-20513678)
chr5 (143-228)||(1657969-1658054)
chr5 (147-327)||(10650434-10650601)
chr5 (256-367)||(22023483-22023597)
chr5 (143-272)||(10204579-10204708)
chr5 (143-212)||(14245218-14245287)
chr5 (231-367)||(29002222-29002359)
chr5 (143-270)||(15986738-15986865)
chr5 (143-209)||(13634886-13634952)
chr5 (143-212)||(8502838-8502907)
chr5 (143-212)||(14245091-14245160)
chr5 (143-278)||(33744299-33744434)
chr5 (142-212)||(11757075-11757145)
chr5 (143-278)||(14684588-14684725)
chr5 (143-212)||(7544308-7544377)
chr5 (185-242)||(11419303-11419360)
chr5 (143-208)||(16938655-16938720)
chr5 (232-333)||(27110120-27110220)
chr5 (231-333)||(43497-43601)
chr5 (143-275)||(40305774-40305906)
chr5 (143-278)||(8551524-8551659)
chr5 (186-261)||(39966075-39966150)
chr5 (213-275)||(33424911-33424973)
chr5 (145-218)||(11436944-11437017)
chr5 (268-333)||(14245139-14245204)
chr5 (243-328)||(32727833-32727918)
chr5 (191-278)||(13298317-13298402)
chr5 (286-345)||(1657959-1658018)
chr5 (176-279)||(2556122-2556224)
chr5 (143-226)||(4423233-4423316)
chr5 (179-278)||(5688452-5688551)
chr5 (143-278)||(10043255-10043390)
chr5 (143-278)||(21580950-21581085)
chr5 (267-333)||(4423338-4423404)
chr5 (143-209)||(10476203-10476269)
chr5 (145-211)||(36363205-36363271)
chr5 (143-184)||(5688590-5688631)
chr5 (231-278)||(18855698-18855745)
chr5 (141-211)||(9798613-9798683)
chr5 (296-345)||(14245202-14245251)
chr5 (143-208)||(15986627-15986692)
chr5 (143-212)||(33744196-33744265)
chr5 (197-244)||(43433-43481)
chr5 (230-278)||(1977622-1977670)
chr5 (230-278)||(10043115-10043163)
chr5 (143-207)||(12035939-12036003)
[»] chr8 (71 HSPs)
chr8 (143-345)||(31543111-31543313)
chr8 (143-367)||(1026865-1027089)
chr8 (144-348)||(11575442-11575646)
chr8 (143-367)||(9718495-9718720)
chr8 (146-333)||(1281149-1281336)
chr8 (143-333)||(37923129-37923320)
chr8 (144-367)||(29358356-29358581)
chr8 (159-345)||(31738442-31738628)
chr8 (143-345)||(30479756-30479958)
chr8 (143-367)||(7502970-7503195)
chr8 (143-345)||(2248455-2248657)
chr8 (179-343)||(16652988-16653152)
chr8 (143-332)||(28083745-28083934)
chr8 (179-346)||(11785565-11785732)
chr8 (143-334)||(6315069-6315256)
chr8 (144-333)||(7979144-7979333)
chr8 (143-345)||(40990220-40990424)
chr8 (143-333)||(11033422-11033611)
chr8 (178-322)||(37032417-37032561)
chr8 (186-335)||(30664407-30664556)
chr8 (143-278)||(12022249-12022384)
chr8 (175-277)||(42650443-42650545)
chr8 (143-333)||(13404979-13405173)
chr8 (181-279)||(41103611-41103709)
chr8 (161-340)||(3726907-3727078)
chr8 (170-300)||(33922550-33922680)
chr8 (179-345)||(36308881-36309048)
chr8 (143-333)||(4247569-4247761)
chr8 (144-271)||(10028114-10028241)
chr8 (191-333)||(29690973-29691118)
chr8 (141-279)||(24243152-24243289)
chr8 (143-278)||(16024156-16024292)
chr8 (143-278)||(30365133-30365268)
chr8 (143-278)||(8815247-8815382)
chr8 (143-278)||(43826335-43826470)
chr8 (274-343)||(34634277-34634346)
chr8 (174-278)||(38198155-38198258)
chr8 (203-278)||(27487053-27487128)
chr8 (164-278)||(30581916-30582033)
chr8 (143-212)||(3726866-3726935)
chr8 (143-212)||(11785698-11785767)
chr8 (143-212)||(16653121-16653190)
chr8 (143-212)||(43732859-43732928)
chr8 (143-278)||(40633095-40633229)
chr8 (152-278)||(26167769-26167894)
chr8 (146-211)||(31543078-31543143)
chr8 (143-212)||(31738595-31738664)
chr8 (143-275)||(20472801-20472933)
chr8 (224-311)||(35694828-35694915)
chr8 (146-209)||(36309018-36309081)
chr8 (143-278)||(9933243-9933379)
chr8 (143-270)||(8671908-8672035)
chr8 (222-261)||(34633819-34633858)
chr8 (143-275)||(43732682-43732822)
chr8 (144-209)||(7394636-7394701)
chr8 (143-212)||(16024326-16024394)
chr8 (143-212)||(34634315-34634384)
chr8 (143-204)||(41103507-41103568)
chr8 (216-276)||(27483636-27483696)
chr8 (144-208)||(30479721-30479785)
chr8 (316-367)||(37032396-37032447)
chr8 (225-275)||(34552646-34552696)
chr8 (277-345)||(10028259-10028328)
chr8 (230-279)||(16838152-16838201)
chr8 (197-278)||(39449361-39449442)
chr8 (191-279)||(5562016-5562102)
chr8 (191-278)||(6192392-6192475)
chr8 (143-278)||(9434405-9434540)
chr8 (144-212)||(10028295-10028363)
chr8 (232-272)||(21536981-21537021)
chr8 (292-324)||(42919880-42919912)
[»] chr3 (76 HSPs)
chr3 (143-333)||(24560220-24560410)
chr3 (146-367)||(21773788-21774010)
chr3 (143-345)||(25655009-25655213)
chr3 (143-333)||(41110372-41110562)
chr3 (143-345)||(18654639-18654842)
chr3 (146-365)||(220416-220635)
chr3 (163-367)||(30200104-30200312)
chr3 (143-367)||(37102165-37102380)
chr3 (145-346)||(9312509-9312708)
chr3 (145-344)||(52473920-52474119)
chr3 (141-332)||(27541983-27542174)
chr3 (179-333)||(46556182-46556338)
chr3 (179-327)||(2387817-2387965)
chr3 (143-283)||(28582610-28582750)
chr3 (181-333)||(41040001-41040153)
chr3 (143-321)||(43005804-43005980)
chr3 (145-283)||(14897981-14898119)
chr3 (144-284)||(46204890-46205030)
chr3 (179-327)||(651770-651917)
chr3 (215-333)||(36568954-36569072)
chr3 (197-329)||(10748345-10748484)
chr3 (185-367)||(52185060-52185241)
chr3 (192-333)||(55327422-55327563)
chr3 (214-345)||(16275744-16275875)
chr3 (191-333)||(37807131-37807273)
chr3 (142-261)||(6803324-6803443)
chr3 (152-333)||(40463922-40464103)
chr3 (143-261)||(54574484-54574597)
chr3 (175-279)||(37236958-37237061)
chr3 (144-326)||(12790377-12790559)
chr3 (143-278)||(44412364-44412499)
chr3 (146-278)||(10943720-10943852)
chr3 (197-367)||(40858622-40858793)
chr3 (143-278)||(21090177-21090312)
chr3 (197-278)||(45663250-45663330)
chr3 (192-281)||(51819228-51819317)
chr3 (146-278)||(41414084-41414216)
chr3 (144-275)||(17474315-17474446)
chr3 (179-278)||(46978466-46978565)
chr3 (197-275)||(42699721-42699799)
chr3 (197-278)||(16884077-16884158)
chr3 (143-208)||(24560393-24560458)
chr3 (197-278)||(34641049-34641130)
chr3 (143-212)||(34641162-34641231)
chr3 (143-278)||(24253724-24253860)
chr3 (143-278)||(27197755-27197890)
chr3 (180-278)||(54996786-54996881)
chr3 (279-345)||(28581225-28581291)
chr3 (200-274)||(48683672-48683746)
chr3 (181-278)||(8432365-8432462)
chr3 (143-212)||(18654603-18654672)
chr3 (143-208)||(28581189-28581254)
chr3 (216-253)||(31684362-31684399)
chr3 (143-212)||(41110324-41110393)
chr3 (174-278)||(25179928-25180032)
chr3 (144-212)||(55428551-55428619)
chr3 (143-206)||(36568907-36568969)
chr3 (231-278)||(42772123-42772170)
chr3 (236-302)||(13082945-13083010)
chr3 (143-212)||(24253894-24253963)
chr3 (159-212)||(26135969-26136022)
chr3 (216-253)||(31894019-31894056)
chr3 (174-278)||(49815456-49815559)
chr3 (161-209)||(25654991-25655039)
chr3 (215-279)||(47989070-47989133)
chr3 (215-279)||(47998357-47998420)
chr3 (215-279)||(48007644-48007707)
chr3 (159-211)||(52474088-52474140)
chr3 (197-275)||(26135854-26135932)
chr3 (175-208)||(9312506-9312539)
chr3 (146-207)||(27541937-27541998)
chr3 (179-212)||(30200127-30200160)
chr3 (179-212)||(37102188-37102221)
chr3 (143-208)||(41039953-41040018)
chr3 (315-367)||(46978443-46978496)
chr3 (160-212)||(46556317-46556368)
[»] chr1 (62 HSPs)
chr1 (143-345)||(12234013-12234215)
chr1 (143-345)||(30010335-30010537)
chr1 (143-333)||(32951369-32951559)
chr1 (143-344)||(38509934-38510135)
chr1 (143-345)||(40094972-40095175)
chr1 (143-333)||(41498407-41498597)
chr1 (143-345)||(35349503-35349703)
chr1 (147-345)||(2858971-2859169)
chr1 (179-333)||(8529838-8529992)
chr1 (179-332)||(50744332-50744486)
chr1 (144-343)||(49946629-49946828)
chr1 (144-333)||(51597672-51597861)
chr1 (148-300)||(10391880-10392032)
chr1 (185-330)||(45585739-45585884)
chr1 (217-341)||(36285617-36285741)
chr1 (143-345)||(26940882-26941074)
chr1 (143-343)||(6563581-6563779)
chr1 (143-345)||(7444481-7444700)
chr1 (192-365)||(44210925-44211097)
chr1 (224-345)||(41676363-41676486)
chr1 (143-278)||(35927817-35927951)
chr1 (143-276)||(1085598-1085731)
chr1 (143-275)||(33643271-33643403)
chr1 (246-332)||(20576185-20576269)
chr1 (143-275)||(525208-525341)
chr1 (143-212)||(12234182-12234251)
chr1 (141-285)||(2470830-2470968)
chr1 (143-233)||(26324017-26324112)
chr1 (217-311)||(42230615-42230709)
chr1 (143-212)||(40094936-40095005)
chr1 (145-261)||(43553053-43553170)
chr1 (148-279)||(49832555-49832683)
chr1 (143-275)||(40709401-40709532)
chr1 (143-212)||(20576136-20576205)
chr1 (143-212)||(30010504-30010573)
chr1 (143-212)||(38509897-38509966)
chr1 (199-275)||(50079493-50079569)
chr1 (198-272)||(2506597-2506671)
chr1 (268-343)||(43552037-43552108)
chr1 (224-278)||(51303490-51303544)
chr1 (143-228)||(2470733-2470818)
chr1 (143-208)||(2858935-2859000)
chr1 (231-278)||(12108086-12108133)
chr1 (215-278)||(27739127-27739189)
chr1 (215-278)||(42742416-42742478)
chr1 (231-278)||(51582072-51582119)
chr1 (143-212)||(35349469-35349536)
chr1 (143-212)||(41498576-41498646)
chr1 (143-209)||(43551999-43552065)
chr1 (221-274)||(25268345-25268398)
chr1 (143-208)||(28770897-28770962)
chr1 (179-228)||(41676437-41676486)
chr1 (144-212)||(35512969-35513037)
chr1 (180-275)||(51303685-51303779)
chr1 (143-212)||(1085492-1085562)
chr1 (143-189)||(20607412-20607458)
chr1 (233-275)||(49065548-49065590)
chr1 (232-281)||(20607311-20607360)
chr1 (143-208)||(35927988-35928053)
chr1 (144-212)||(8529971-8530039)
chr1 (269-344)||(28770852-28770925)
chr1 (176-212)||(40964771-40964807)
[»] chr6 (59 HSPs)
chr6 (143-367)||(21606860-21607085)
chr6 (143-346)||(14515476-14515677)
chr6 (143-333)||(4097563-4097754)
chr6 (143-345)||(31849113-31849315)
chr6 (143-333)||(19278085-19278278)
chr6 (143-345)||(9719070-9719271)
chr6 (143-333)||(1390322-1390512)
chr6 (143-345)||(30487345-30487546)
chr6 (143-333)||(33235954-33236143)
chr6 (143-367)||(33041473-33041690)
chr6 (143-345)||(9721177-9721378)
chr6 (202-333)||(34176397-34176528)
chr6 (143-345)||(10818232-10818421)
chr6 (179-345)||(1300658-1300825)
chr6 (200-334)||(5585352-5585486)
chr6 (197-332)||(10348850-10348986)
chr6 (146-333)||(16738047-16738233)
chr6 (198-311)||(13583777-13583890)
chr6 (141-332)||(30849966-30850155)
chr6 (143-324)||(2892664-2892844)
chr6 (143-261)||(2893633-2893751)
chr6 (143-256)||(12811108-12811221)
chr6 (180-345)||(665879-666051)
chr6 (196-333)||(1395691-1395829)
chr6 (154-255)||(6034201-6034302)
chr6 (143-212)||(9721141-9721210)
chr6 (180-327)||(2892900-2893050)
chr6 (209-299)||(25741476-25741566)
chr6 (247-364)||(2900017-2900134)
chr6 (143-212)||(9719034-9719103)
chr6 (197-279)||(14548711-14548793)
chr6 (143-261)||(23090998-23091116)
chr6 (180-278)||(26318345-26318443)
chr6 (143-212)||(10818388-10818457)
chr6 (143-278)||(15323228-15323363)
chr6 (143-278)||(15353367-15353501)
chr6 (232-279)||(32926737-32926784)
chr6 (143-207)||(14515648-14515712)
chr6 (143-217)||(1300787-1300861)
chr6 (159-298)||(29490481-29490621)
chr6 (286-367)||(7775962-7776045)
chr6 (143-278)||(9051640-9051773)
chr6 (218-274)||(25468509-25468565)
chr6 (143-207)||(30487309-30487373)
chr6 (210-299)||(25747403-25747493)
chr6 (143-208)||(1390495-1390560)
chr6 (230-279)||(17155446-17155495)
chr6 (143-207)||(665844-665907)
chr6 (145-208)||(19278039-19278102)
chr6 (224-275)||(3841169-3841220)
chr6 (181-268)||(16509322-16509408)
chr6 (170-269)||(29019948-29020046)
chr6 (232-279)||(32922437-32922484)
chr6 (224-261)||(5381306-5381343)
chr6 (231-279)||(5526849-5526897)
chr6 (147-211)||(9051541-9051605)
chr6 (230-278)||(14368046-14368094)
chr6 (179-211)||(21606883-21606915)
chr6 (148-211)||(23091131-23091195)
[»] scaffold0096 (1 HSPs)
scaffold0096 (143-365)||(6587-6809)
[»] scaffold0262 (2 HSPs)
scaffold0262 (179-345)||(16335-16501)
scaffold0262 (146-207)||(16302-16363)
[»] scaffold0171 (1 HSPs)
scaffold0171 (185-335)||(15995-16145)
[»] scaffold0026 (2 HSPs)
scaffold0026 (143-333)||(1175-1365)
scaffold0026 (143-274)||(1507-1639)
[»] scaffold0341 (1 HSPs)
scaffold0341 (143-343)||(18774-18972)
[»] scaffold0294 (2 HSPs)
scaffold0294 (197-333)||(15320-15455)
scaffold0294 (143-212)||(15434-15503)
[»] scaffold0007 (1 HSPs)
scaffold0007 (144-212)||(242388-242456)
[»] scaffold0119 (2 HSPs)
scaffold0119 (147-278)||(37390-37521)
scaffold0119 (147-267)||(30722-30843)
[»] scaffold0018 (1 HSPs)
scaffold0018 (213-275)||(69316-69378)
[»] scaffold0198 (1 HSPs)
scaffold0198 (143-208)||(3150-3215)
[»] scaffold0012 (1 HSPs)
scaffold0012 (144-212)||(184779-184847)
[»] scaffold0006 (1 HSPs)
scaffold0006 (231-279)||(81516-81564)
[»] scaffold0783 (1 HSPs)
scaffold0783 (231-279)||(6015-6063)
[»] scaffold0095 (1 HSPs)
scaffold0095 (197-278)||(8204-8285)


Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 399
Target Start/End: Original strand, 27735617 - 27736015
Alignment:
Q  14 aagaatataaaataatggaaaaatgatgctttggagaaatttgagttaatcgttacaattgtggatgaaat--gtgtttgaagattcaatatttcatggt 111  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||  ||||||||||||||||||||| || ||    
T  27735617 aagaaaataaaataatggaaaaatgatgctttggagaaatttgagtttaccgttgcaattgtggatgaaatatgtgtttgaagattcaatattttatagt 27735716  T
Q  112 aacactacatagtgagggagaagtaacgtttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  27735717 aacactacatagtgagggagaagtaacatttatgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacgga 27735816  T
Q  212 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagt 311  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27735817 ctatataacatgtttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgttaatatgctaactctttaaaaaacattttatagt 27735916  T
Q  312 atccgtaatttaaaaatgaaaaatgaaccct-----------ccctcctaaaccgtccatccaaacataccttgagttcaaaggaatgaggcaacacac 399  Q
     ||||||||||||||||||||||||||||||           |||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||    
T  27735917 gtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccctccatccaaacacaccttgagttcagaggaatgagccaacacac 27736015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 54935070 - 54935274
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaaggg-agggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||| ||||||||||||||| ||| ||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  54935070 gtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaatta 54935169  T
Q  242 agtgtgattgaagta-ttataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaacc 340  Q
    ||||||||||||||| ||||| |||| |||||||| |||||||| ||||| ||||||| | |||||||||| ||||||||||||||||||||||| ||||    
T  54935170 agtgtgattgaagtatttatatgatcgtttatcatattaatatgataactttttaaaatacatttcatagtgtccgtaatttaaaaatgaaaaataaacc 54935269  T
Q  341 ctccc 345  Q
    |||||    
T  54935270 ctccc 54935274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 45741893 - 45742083
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||||| | | |||| |||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  45741893 gtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaattaa 45741992  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  45741993 atgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 45742083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 143 - 342
Target Start/End: Complemental strand, 31348562 - 31348363
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||||||| ||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||     
T  31348562 gtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattat 31348463  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||| ||||||| |||  ||||||||||||||||| || || ||||||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  31348462 gtgtgattgaattattatatgattgtttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccct 31348363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 46007942 - 46007715
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||| | ||||||||||| ||||||| |||||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaa 46007843  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaata--tttcatagtatccgtaatttaaaaatgaaaaatgaacc 340  Q
    ||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||||||    ||||||  | || |||||||||||||||||| | ||||    
T  46007842 gtgagattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaaacattttcattatgtcggtaatttaaaaatgaaaagtaaacc 46007743  T
Q  341 ct-ccctcctaaaccgtccatccaaaca 367  Q
    || |||||||||||| ||||||||||||    
T  46007742 ctcccctcctaaaccctccatccaaaca 46007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 26166940 - 26167118
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||||  ||||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  26166940 gtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaattaa 26167039  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatt 321  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||| |||||| ||| |||||||||    
T  26167040 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactcttaaaaaaacatttcaaagtgtccgtaatt 26167118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 54320438 - 54320627
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||| || ||| |||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||    
T  54320438 gtgtgtttggattgagggtttaggagggaaaggga-gggagggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaa 54320536  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||||||| ||||    
T  54320537 gtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacgtttcatagtgtccgtaatttaaaaattaaaa 54320627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 5731072 - 5730869
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcattttt-aaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||| ||||  ||| | ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatta 5730973  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||  ||||||||||||||||||||  | |||||    
T  5730972 agtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccc 5730873  T
Q  342 tccc 345  Q
    ||||    
T  5730872 tccc 5730869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 1968600 - 1968445
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  1968600 gtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaatcag 1968501  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa 299  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||    
T  1968500 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact-tttaaaaa 1968445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 159 - 345
Target Start/End: Complemental strand, 49735692 - 49735507
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 258  Q
    ||||||||||||||| ||| |||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  49735692 ggtttaggaggggaagggaggggagg-tttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatatt 49735594  T
Q  259 ataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||  ||| ||||||||||||||| | ||||| ||||||| | |||||||  | ||||||||||||||||||||| |||||||||||    
T  49735593 atattatcgtttatcatgttaataggttaactttttaaaagacatttcatgttgtccgtaatttaaaaatgaaaagtgaaccctccc 49735507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 143 - 283
Target Start/End: Original strand, 37711141 - 37711286
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggaggg-----tttaattttcatttttaaattacggactatataacatgtttttctaaaataa 237  Q
    ||||||||||||||| ||||||||||||||| |||||||||||     |||  ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  37711141 gtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataa 37711240  T
Q  238 attaagtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  37711241 attaagtgtgattgaagtattatatgatcatttatcatgttaatat 37711286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 143 - 366
Target Start/End: Complemental strand, 47433950 - 47433725
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactata-taacatgtttttctaaaataaatta 241  Q
    |||||||||| |||| ||||||||||||||| |||  |||||||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||||||||    
T  47433950 gtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaatta 47433851  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    |||||||||||||||||||| |||| ||||| |||||| |||  ||| | ||||||||| ||| |||| | ||| ||||||||||| ||||| | |||||    
T  47433850 agtgtgattgaagtattatatgatcgtttat-atgttattattttaattttttaaaaaacattccataatgtccataatttaaaaacgaaaattaaaccc 47433752  T
Q  342 t--ccctcctaaaccgtccatccaaac 366  Q
    |  |||||||||||| |||||| ||||    
T  47433751 ttcccctcctaaaccctccatctaaac 47433725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 29798291 - 29798490
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||||||||||||||||||  ||  |||  ||||| ||||  |||||||||||| |||||||||||||||||||||    ||||| ||    
T  29798291 gtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtttttct----taaatcaa 29798386  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt-aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    ||||||||||||||||||| |||| ||||| ||||| || ||| ||| | ||||||||| |||||||||| ||||||||||||||||||||| |||||||    
T  29798387 gtgtgattgaagtattatatgatcgtttattatgtttaacatgttaattttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactgaaccc 29798486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 142 - 327
Target Start/End: Original strand, 16400802 - 16400987
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    |||||| ||||||||| ||||||||||| ||| ||| |||||| || | ||||  |||||| | |||  |||||| ||||||||||||||||||||||||    
T  16400802 tgtgtgattggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaatta 16400901  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    | | |||||||||||||||| |||| ||||||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||||    
T  16400902 attatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaactatttcatagtgtccctaatttaaaaa 16400987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 192 - 345
Target Start/End: Original strand, 35248738 - 35248891
Alignment:
Q  192 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactc 291  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||||     
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattatttatcatgttaatacgttaactt 35248837  T
Q  292 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    || ||||||||||    ||| ||| |||||||||| |||||| | |||||||||    
T  35248838 ttaaaaaaatattcttgagtgtccataatttaaaattgaaaagtaaaccctccc 35248891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 143 - 346
Target Start/End: Complemental strand, 2248042 - 2247841
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||| |||  |||||||| ||||| ||||| |||||||||||| || |||||||||||||||||||||| |||| |     
T  2248042 gtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaat-at 2247945  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||||  ||  |||||||| |||||| | |||   ||||| ||| |||| ||| | ||||||||||||||||||||||||||||||    
T  2247944 gtgtgattgaagtattatataattgtttatcatattaataagttaagattttaataaacattttataatgtccgtaatttaaaaatgaaaaatgaaccct 2247845  T
Q  343 ccct 346  Q
    ||||    
T  2247844 ccct 2247841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 41174397 - 41174538
Alignment:
Q  192 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactc 291  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||| |||||||| |||||||||| |||||||||||||||||     
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattatatgatcatttattatgttaatatgctaactt 41174496  T
Q  292 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||  |||||||||| ||| ||| |||||||||||||    
T  41174497 tttaaaaaccatttcatagtgtccctaaattaaaaatgaaaa 41174538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 36151579 - 36151768
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||| ||||| ||||| |||||||||  || | |||||||||  | |  ||| |||||||| |||||||||||||||||||||||||||||||||    
T  36151579 gtgtatttgaattgagggttttggaggggaagagatgagagggtttatgtatattttataaattacagactatataacatgtttttctaaaataaattaa 36151678  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||  ||||  |||| | | |||||||||||||||||    
T  36151679 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaact-tttaaaaatcattttctagtgttcataatttaaaaatgaaaa 36151768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 143 - 281
Target Start/End: Original strand, 56135752 - 56135890
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||  ||||||||||||| || || ||| |||||||| |||||||||||||    
T  56135752 gtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaa 56135851  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaat 281  Q
    ||||  ||||||||||||| |||||||||||||||||||    
T  56135852 gtgtttttgaagtattatatgatcatttatcatgttaat 56135890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 153 - 333
Target Start/End: Original strand, 6891373 - 6891553
Alignment:
Q  153 attgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattga 252  Q
    ||||| ||||||| |||||||  || ||||  ||||| ||||| |||||||| |||  | ||||||||||||||||||||||||||||||||||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattga 6891472  T
Q  253 agtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||| |||| ||||| |||||| |||  ||| | ||| ||||| | |||||||| ||| ||||||||||| |||||    
T  6891473 agtattatatgatcgtttataatgttattattttaatttttttaaaaacaattcatagtgtccataatttaaaaacgaaaa 6891553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 159 - 345
Target Start/End: Complemental strand, 24565569 - 24565385
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 258  Q
    ||||||||||||||| ||| || ||  ||||  |||| |||||||||||||| |||||||||||||||||||| |||||  | || ||||||||||||||    
T  24565569 ggtttaggaggggaagggagggaagaatttacatttcttttttaaattacgggctatataacatgtttttctataataa--tgagcgtgattgaagtatt 24565472  T
Q  259 ataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||| | |  ||||||| ||||||| | ||||| ||||||||  ||||| || ||||||||||||||||||||||| | |||||||||    
T  24565471 atatgtttgtttatcacgttaataagttaactttttaaaaagcatttcgtaatatccgtaatttaaaaatgaaaagtaaaccctccc 24565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 45132736 - 45132586
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| |||||  ||||||||||||||  || | || |||||| ||||| ||||||||||||||||||||||| ||||      ||||||||||||    
T  45132736 gtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatgt------aaaataaattaa 45132643  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa 299  Q
    ||||||||||||||||||| |||| |||||||| |||||||| ||||| ||||||||    
T  45132642 gtgtgattgaagtattatatgatcgtttatcattttaatatgttaactttttaaaaa 45132586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 146 - 333
Target Start/End: Complemental strand, 17938346 - 17938158
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttcta-aaataaattaagt 244  Q
    ||||||||||||   ||||||||||||| |||   ||| ||||| ||||| ||||||||||||  |||||||||||| ||||| |  |||||||||||||    
T  17938346 tgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagt 17938247  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||| |||| |||||||||||| |||  ||| | ||||||||| ||| |||| | ||| ||||||||||| |||||    
T  17938246 gtgattgaagtattatatgatcgtttatcatgttattattttaaatttttaaaaaacattccataatgtccataatttaaaaacgaaaa 17938158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 145 - 367
Target Start/End: Original strand, 34110803 - 34111032
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattt-tcatttttaaattacggactatataacatg--------tttttctaaaat 235  Q
    ||||||||||||| |||||||||||||||  || |||| |  ||||||| |||||||||||||||  ||||||||||||         ||||| | ||||    
T  34110803 gtgtttggattgagggtttaggaggggaagagaggggatg--ttaatttctcatttttaaattacaaactatataacataacatgtttttttttttaaat 34110900  T
Q  236 aaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
    ||| |||||||| || || ||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||| ||||| |||||||||||||| |||| |    
T  34110901 aaagtaagtgtgcttaaaatattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcacagtat-cgtaatttaaaaataaaaagt 34110999  T
Q  336 gaaccct-ccctcctaaaccgtccatccaaaca 367  Q
     |||||| |||||||||||| |||||| |||||    
T  34111000 aaaccctcccctcctaaaccctccatctaaaca 34111032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 333
Target Start/End: Original strand, 44784038 - 44784184
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgc 285  Q
    |||| ||||| ||||||||||||  || |||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||| | |||||||||     
T  44784038 tttacttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattatatgatcgtttataaggttaatatgt 44784137  T
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||  |||| |||||||||| |||| | ||||||||||||| |||||    
T  44784138 taac-gtttagaaaatatttcgtagtgttcgtaatttaaaaacgaaaa 44784184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 186 - 327
Target Start/End: Original strand, 28332850 - 28332991
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgc 285  Q
    |||| ||||| ||||||||||||  ||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||| |||| || ||||||||||    
T  28332850 tttacttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattatatgatcgtttaccaggttaatatgc 28332949  T
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    |||   |||| |||||||||| |||| |  ||||||||||||    
T  28332950 taatgttttagaaaatatttcgtagtgttggtaatttaaaaa 28332991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 2917150 - 2917063
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    |||||||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattatatgatcgtttatcatgttaatatg 2917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 17182726 - 17182594
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| |||||||| ||||||||||  ||| ||||  ||||||||||||| || |  ||| || ||||| |||||||||||||    
T  17182726 gtgtgtttggattgagggtttatgaggggaaaggaagggaggacttacttttattttttaaattacgaacaaggtaaaatatttttttaaaataaattaa 17182627  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| |||||||||||||    
T  17182626 gtgtttttgaagtattatatgatcatttatcat 17182594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 22920984 - 22921117
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaat-ta 241  Q
    |||||||||||||||||||||||||||| ||  ||  ||||  ||||  |||| ||||||||||||  |||| |||||||||||||||| |||||||  |    
T  22920984 gtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaa 22921083  T
Q  242 agtgtgattgaagtattataggatcatttatcat 275  Q
    |||||||||||||||||||| |||| ||||||||    
T  22921084 agtgtgattgaagtattatatgatcgtttatcat 22921117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 22970815 - 22970682
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaat-ta 241  Q
    |||||||||||||||||||||||||||| ||  ||  ||||  ||||  |||| ||||||||||||  |||| |||||||||||||||| |||||||  |    
T  22970815 gtgtgtttggattgatggtttaggagggaaaaagagaggagaatttacgtttcttttttaaattacaaactacataacatgtttttctagaataaatcaa 22970716  T
Q  242 agtgtgattgaagtattataggatcatttatcat 275  Q
    |||||||||||||||||||| |||| ||||||||    
T  22970715 agtgtgattgaagtattatatgatcgtttatcat 22970682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 7977738 - 7977602
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaatta 241  Q
    ||||||||||||||| |||||| |||||||| ||| ||||||||| ||||||  ||||||||||||| |  || ||| ||| ||||| |||| |||||||    
T  7977738 gtgtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacgaagaatgtaaaatgttttttttaaagtaaatta 7977639  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    | |||  ||||||||||||| ||||||||||||||||    
T  7977638 attgtttttgaagtattatatgatcatttatcatgtt 7977602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 47846297 - 47846161
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttct-aaaataaatta 241  Q
    ||||||||||||||| |||||| |||| ||| ||| ||||||||||| ||||  ||||||||||| | || || |||  ||||||| | |||||||||||    
T  47846297 gtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaataaatta 47846198  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||  ||||||||||||| ||| ||||||||||||    
T  47846197 agtgtttttgaagtattatatgattatttatcatgtt 47846161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 278
Target Start/End: Original strand, 55510173 - 55510308
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaaggg-agggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||| || |||||  ||||| || |||| |||  ||| ||||||||||||| |||  ||| || ||| |||||||| |||||||||||||    
T  55510173 tgtgtttggattgaggggttagggagggaaggggaggggaggacttacttttcatttttaatttaaagacaatgtaaaatgtttttttaaaataaattaa 55510272  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| |||||||||||| ||||||| ||||||||    
T  55510273 gtgtgactgaagtattatatgatcattcatcatgtt 55510308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 49735471 - 49735540
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  49735471 gtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggac 49735540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 54320675 - 54320606
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||    
T  54320675 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggac 54320606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 54935310 - 54935241
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  54935310 gtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 54935241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 269
Target Start/End: Complemental strand, 21695129 - 21695004
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaag-ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||  |||||| |||||||| ||||| |||||||||| |||||  |||||||||| |||| ||||||  | ||||| | || |||||||    
T  21695129 gtgtgtttggattgggggtttatgaggggaa-ggaagcggagggtttacttttctattttaaattatggacaatataatttattttttttaa-taaatta 21695032  T
Q  242 agtgtgattgaagtattataggatcatt 269  Q
    |||||||||||||||||||| |||||||    
T  21695031 agtgtgattgaagtattatatgatcatt 21695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 22186722 - 22186857
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||||||||| ||||||||| ||||| ||| || || ||| | |||| |||||||||||||  || |  ||| |||||||| |||||||||| ||    
T  22186722 gtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaattacaaacaacgtaaaatgtttttttaaaataaataaa 22186821  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||||||  |||||||||||||||    
T  22186822 gtgtttttgaagtattatataatcatttatcatgtt 22186857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 278
Target Start/End: Original strand, 43961445 - 43961548
Alignment:
Q  175 ggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    ||||||||||| | | ||||  ||||||||||| | || || ||| |||||||| |||||||||||||||||  ||||||||||||| ||||||||||||    
T  43961445 ggaagggagggctcacttttattttttaaattatgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcatttatca 43961544  T
Q  275 tgtt 278  Q
    ||||    
T  43961545 tgtt 43961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 6938287 - 6938360
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataa 219  Q
    |||||||||||||| ||||||||||||| ||| | |||| |||| ||||| |||||||||||||||||||||||    
T  6938287 tgtttggattgatgatttaggaggggaagggaggagaggatttatttttcctttttaaattacggactatataa 6938360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 6938488 - 6938403
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    |||||||||||| || |||||| |||||||||||| ||||||||| | |||||||||||||||||||||   ||||| ||||||||    
T  6938488 gtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgttttt 6938403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 34995108 - 34995189
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| || || | | ||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||    
T  34995108 tttttaaattacgaacaatgtgaaatgtttttctaaaataaattaagtgtttttgaagtattataagattatttatcatgtt 34995189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 37711364 - 37711295
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  37711364 gtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggac 37711295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 51329799 - 51329930
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaag-ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    |||||||||||||||  |||||||||||||| | ||| |||| ||| |||||| |||||||||||||| || | | || |||||||| ||||||||||||    
T  51329799 gtgtgtttggattgagagtttaggaggggaa-gaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaatta 51329897  T
Q  242 agtgtgattgaagtattataggatcatttatcat 275  Q
    ||| |  |||||||||||||  ||||||||||||    
T  51329898 agt-tttttgaagtattatataatcatttatcat 51329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 367
Target Start/End: Original strand, 55080582 - 55080807
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||| ||||  || | || |||| | ||||  ||| ||||||||| || || ||| ||||||||  ||||||| ||||    
T  55080582 gtgtgtttggattgagggtttaggagaggaagagaggagatggttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagttaa 55080681  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||  |||||||||| || ||||||||||||||||  ||    || | | |||||| ||||| ||| | | ||||||||||||| ||||| | |  |||    
T  55080682 gtgtttttgaagtattttatgatcatttatcatgttgttaattaaattttctaaaaattattttataatgttcgtaatttaaaaaagaaaagtaagtcct 55080781  T
Q  343 ccc-tcctaaaccgtccatccaaaca 367  Q
    ||| ||||||||| ||||||||||||    
T  55080782 cccatcctaaaccctccatccaaaca 55080807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 37761468 - 37761602
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||| ||| ||| || || ||| | |||| |||||||||||||| || | |||| || ||||| || ||||||||||    
T  37761468 gtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacgaacaacataaaatattttt-tagaataaattaa 37761566  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||| |||||  |||||||||||||||    
T  37761567 gtgtttttgaagtgttatataatcatttatcatgtt 37761602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 27735986 - 27735901
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    |||||||||||| || ||||||||||||||| ||| |  |||||| | ||||||||||||||||||||||  ||||| ||||||||    
T  27735986 gtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttt 27735901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 31720072 - 31719966
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg--tttttctaaaataaatt 240  Q
    ||||||||||||||| | ||||||||||||   |||||||  | ||||||||| ||||||||||||  |||||||||||||  ||||| | |||||||||    
T  31720072 gtgtgtttggattgaggctttaggagggga---gaagggattg-ttaattttcttttttaaattacaaactatataacatgttttttttttaaataaatt 31719977  T
Q  241 aagtgtgattg 251  Q
    |||||||||||    
T  31719976 aagtgtgattg 31719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 23813152 - 23813240
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||| |||||||||||||  ||||| ||||||||  ||| ||||| |||||| ||||||||| |||| ||||||||||| |||||    
T  23813152 ttttcattgttaaattacggacactataaaatgtttttgaaaattaaataaagtgttattgaagtactatatgatcatttatcgtgtta 23813240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 18516675 - 18516577
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||| ||| ||||| ||||||||||| | ||  ||||| ||||||||  ||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  18516675 gggagggcttacttttc-tttttaaattatgaacactataaaatgtttttaaaaaatgaattaagtgtgattgaagcattatgtgatcatttatcatgtt 18516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 6938394 - 6938452
Alignment:
Q  287 aactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||| ||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||    
T  6938394 aactttttaaaaaacattttataatatccgtaatttaaaaatgaaaagtgaaccctccc 6938452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 5730833 - 5730902
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||| ||  || |||||||||||  |||||||||||||||||||||    
T  5730833 gtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 5730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 278
Target Start/End: Complemental strand, 29993994 - 29993877
Alignment:
Q  161 tttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 260  Q
    |||||||||| |||||| ||||||||| | ||||  ||||||||||||| || || ||| | |||||| ||||||| ||||||| |  ||||||||||||    
T  29993994 tttaggagggaaatggaggggagggttcacttttactttttaaattacgaacaatgtaaaaagtttttttaaaatagattaagtatttttgaagtattat 29993895  T
Q  261 aggatcatttatcatgtt 278  Q
    |  |||||  ||||||||    
T  29993894 atcatcatcaatcatgtt 29993877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 41174586 - 41174517
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| |||| |||||| ||||||||||||| ||| ||||    
T  41174586 gtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggac 41174517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 17938115 - 17938179
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||| || ||||||||||||||||||| || || ||||||||||| ||||||||||| ||||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggac 17938179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 333
Target Start/End: Original strand, 36278356 - 36278444
Alignment:
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||| |||| ||| ||||||||| |||||| | ||| | | ||||||||||||| |||| || |||||||||||| |||||    
T  36278356 gtgattgaagtactataagattatttatcatattaatacgttaaatttataaaaaatatttcgtagtgtctgtaatttaaaaacgaaaa 36278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 47846504 - 47846369
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaatta 241  Q
    ||||||||||||||| |||||| |||| ||| |||| ||| |||||| ||||  ||||||||||| | || || |||  || ||||| | ||||||||||    
T  47846504 gtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgtttttttttaaataaatta 47846405  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||| |  ||||||||||||| ||| ||||||||||||    
T  47846404 agtat-tttgaagtattatatgattatttatcatgtt 47846369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 41227576 - 41227619
Alignment:
Q  236 aaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  41227576 aaattaagtgtgattgaagtattatatgatcatttatcacgtta 41227619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 49735733 - 49735687
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggttta 189  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  49735733 gtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 14539357 - 14539410
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||| |||||||||||||||||  ||||||||||||| |||||||||| |||||    
T  14539357 ttttttaaaataaattaagtgtttttgaagtattatatgatcatttattatgtt 14539410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 21694909 - 21694962
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||| ||||||| ||| ||||| ||||||||||||||||    
T  21694909 ggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggac 21694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 231 - 327
Target Start/End: Complemental strand, 34108379 - 34108283
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaa-aatatttcatagtatccgtaatttaaaaa 327  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||| ||||  ||  | ||||||| || |||| ||| |||||||||||||||||    
T  34108379 aaaataaattaagtatgattgaagtattatacaataatttatcatgtt-atattttacttttttaaaataacattttataatatccgtaatttaaaaa 34108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 45742131 - 45742062
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||  | |||||||| ||| || ||| ||||| ||||| ||||||||||||||||||||||    
T  45742131 gtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggac 45742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 278
Target Start/End: Original strand, 47694355 - 47694487
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcat-ttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    ||||||||| || | ||| |||| |||| ||| ||||||| ||| ||||  | |||||||||||||||  ||| | ||| ||| ||||||| ||| ||||    
T  47694355 tgtttggatggaggattttggagcggaagggaggggagggcttactttttctcttttaaattacggacactatgaaatgcttt-ctaaaatcaatcaagt 47694453  T
Q  245 gtgattgaagtattataggatcatttatcatgtt 278  Q
    | | ||||||||||||| ||||||||||||||||    
T  47694454 gcggttgaagtattatatgatcatttatcatgtt 47694487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 54576330 - 54576399
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||| ||||||| ||| ||||||| ||| ||||| |||||| |||||||||    
T  54576330 gtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggac 54576399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 24565349 - 24565417
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    |||||||||||| || ||||||||| |||||     ||||||||||| |||||||||||||||||||||    
T  24565349 gtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaattacgga 24565417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 31348341 - 31348393
Alignment:
Q  160 gtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||| |||||||| ||| || |||||||| ||||||||||||||||||||||    
T  31348341 gtttatgaggggaagggagggaagggtttacttttcatttttaaattacggac 31348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 11842399 - 11842442
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    |||| |||||||| |||||||||||||||| |||||||||||||    
T  11842399 aaatgaattaagtctgattgaagtattatatgatcatttatcat 11842442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 54001289 - 54001206
Alignment:
Q  199 tttaaattacggactatataacatgtttttctaaaataaattaa-gtgtgattgaagtattataggatcatttatcatgttaat 281  Q
    ||||||| ||| || || ||| |||| ||| |||||||||| || ||||  ||||||||||||| |||||||||||||||||||    
T  54001289 tttaaatcacgaacaatgtaaaatgtctttttaaaataaataaaagtgtttttgaagtattatatgatcatttatcatgttaat 54001206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 54745054 - 54745011
Alignment:
Q  235 taaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||||||||||||| |||  ||||||||||||||||    
T  54745054 taaattaagtgtgattgaagtactatgtgatcatttatcatgtt 54745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 195 - 278
Target Start/End: Complemental strand, 56427088 - 56427006
Alignment:
Q  195 catttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||||||||  ||||  |||||| | |||| | ||||||||||||||||  ||||||| ||||||| ||||||||    
T  56427088 catttttaaattacggacactatagaatgtttgtttaaa-tcaattaagtgtgattgatctattatatgatcattaatcatgtt 56427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 2247839 - 2247889
Alignment:
Q  176 gaagggagggtttaattttcatttttaaattacggactatataacatgttt 226  Q
    |||||||||||| | ||||||||||||||||||||||  ||||| ||||||    
T  2247839 gaagggagggttcatttttcatttttaaattacggacattataaaatgttt 2247889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 273
Target Start/End: Original strand, 5307067 - 5307140
Alignment:
Q  199 tttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatc 273  Q
    |||||| | ||||| |||||| ||||||||  ||||||||| ||||||||||| |||||| || |||||||||||    
T  5307067 tttaaagtgcggaccatataaaatgtttttg-aaaataaatcaagtgtgattgcagtattttatgatcatttatc 5307140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 45911368 - 45911331
Alignment:
Q  296 aaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  45911368 aaaaatattttatagtatccgtaatttaaaaaagaaaa 45911331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 276
Target Start/End: Original strand, 8347212 - 8347336
Alignment:
Q  152 gattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattg 251  Q
    |||||| |||||| |||||||||||| | || |  | |||||| |||||||||||||  ||  ||||| || || || | ||||||||  ||| ||||||    
T  8347212 gattgaaggtttatgaggggaatggacgagatgactcaatttttatttttaaattactaacactataaaatattatttttaaataaatctagtatgattg 8347311  T
Q  252 aagtattataggatcatttatcatg 276  Q
    |  ||||||| ||||||||||||||    
T  8347312 atatattatatgatcatttatcatg 8347336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 35248922 - 35248858
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||| || |||||||||| || | ||| ||||||||||| |||||| |||||||||| ||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggac 35248858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 54494723 - 54494759
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattata 261  Q
    |||| |||||||| |||||||||||||||||||||||    
T  54494723 ttttttaaaataagttaagtgtgattgaagtattata 54494759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 8e-74; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 143 - 339
Target Start/End: Complemental strand, 36347782 - 36347586
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36347782 gtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaa 36347683  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaac 339  Q
    |||||||||||||||||||  ||  ||||||||||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||    
T  36347682 gtgtgattgaagtattatataattgtttatcatgttaatatgttaactatttaaaaaatatgtcatagtatccgtaatataaaaatgaaaagtgaac 36347586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 159 - 367
Target Start/End: Original strand, 39821688 - 39821897
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 258  Q
    |||||| ||||| |||||| ||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||| |||||||    
T  39821688 ggtttaagagggaaatggaggggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtatt 39821787  T
Q  259 ataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtc 357  Q
    ||| |||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||||||||| ||||| | |||||| |||||||||||| ||    
T  39821788 ataagatcatttatcatgttaatatgttaactctttaaatattatttcatagtgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctc 39821887  T
Q  358 catccaaaca 367  Q
    ||||||||||    
T  39821888 catccaaaca 39821897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 15224935 - 15224745
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||  | ||||||||||||||| ||| |||| |||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  15224935 gtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaa 15224836  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||||||||||||||||||||| || || ||||||||| |||||||||| |||||||||||||||||||||    
T  15224835 gtgtgattgaagtattatatgatcatttatcatgttaatatgttagctttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 15224745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 39732969 - 39732745
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||  |||||||| | |||||| | |||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  39732969 gtgtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaa 39732871  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    || |||||||||||||||| |||| ||||||||||||||||| ||||| |||| |||| |||||||| | | ||||||||||||||||||| | ||||||    
T  39732870 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcataatgttcgtaatttaaaaatgaaaagtaaaccct 39732771  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||||||||| |||||| |||||    
T  39732770 cccctcctaaaccttccatctaaaca 39732745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 23748134 - 23748300
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||  ||| |||||||||||    
T  23748134 gggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattatattatcgtttatcatgtt 23748233  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||| ||||| ||||||| | |||||||||| |||||| |||||||||||||| |||||||||||    
T  23748234 aatatgttaactttttaaaagacatttcatagtgtccgtagtttaaaaatgaaaagtgaaccctccc 23748300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 143 - 344
Target Start/End: Complemental strand, 19567057 - 19566860
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||| |||      |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  19567057 gtgtgtttggattgagggtttaggagaggag-----gggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaa 19566963  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    ||||||||||||||||||| || | |||||||| |||||||||||||| ||| |||||| |||||||||| || ||||||||||| ||| || | |||||    
T  19566962 gtgtgattgaagtattatacgaccgtttatcattttaatatgctaactttttaaaaaaacatttcatagtgtctgtaatttaaaactgagaagtaaaccc 19566863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 145 - 346
Target Start/End: Complemental strand, 8427110 - 8426917
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    ||||||||||||| |||||||||||| || ||| ||||| ||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaagt 8427011  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctcc 344  Q
    | ||||||||||||||| |||||||||||||||        ||||| ||||||||| |||||||||| ||| |||||||||||| |||| | ||||||||    
T  8427010 gcgattgaagtattatatgatcatttatcatgt--------taactttttaaaaaacatttcatagtgtccttaatttaaaaattaaaagtaaaccctcc 8426919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 36567093 - 36566901
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaatttt-catttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||| |||||||||||||||| || | || | |||| |||| | ||||||||||| | | ||||||||||||||||||| |||||||||    
T  36567093 gtgtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaatta 36566994  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttta-aaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | |||||||||||||||||| |||||||||||||||||||||| ||||| |||| |||||  ||||||| | |||||||||||||||||||||    
T  36566993 attgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttataaaaaactttcataatgtccgtaatttaaaaatgaaaa 36566901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 36046442 - 36046243
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| |||||||| ||| |||||| |||| ||||  |||||||||||||||| |||||||||| |||| ||||||||||| |    
T  36046442 gtgtgtttggattgagggtttatgaggggaagggaggggagg-tttacttttgttttttaaattacggacgatataacatgcttttataaaataaattga 36046344  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||  |||||||||||||  ||||||||| |||||||||||| ||||| ||||||||| ||||  |||| ||||||||||||||||||||||| ||| ||    
T  36046343 gtg--attgaagtattatgtgatcatttaacatgttaatatgttaactttttaaaaaacattttctagtgtccgtaatttaaaaatgaaaaataaactct 36046246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 9426988 - 9427179
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||||||| ||| | |||||||| |||||| ||||||||||||  ||||||||||||||||||| ||| |||||||     
T  9426988 gtgtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaattat 9427087  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactct-ttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | ||||||||||||||||| | |  ||||||||| ||||||||||||| |   |||||| |||| ||||| |||||||||||||||||||||    
T  9427088 gcgtgattgaagtattatatgtttgtttatcatgctaatatgctaactttaaaaaaaaacattttatagtgtccgtaatttaaaaatgaaaa 9427179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 16565832 - 16565970
Alignment:
Q  197 tttttaaattacggactata--taacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttt 294  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||| ||||| |||    
T  16565832 tttttaaattacgaactatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatatttatatgttaacttttt 16565931  T
Q  295 aaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||  |||||||||||||||||||||||||| ||||    
T  16565932 aaaaaacgtttcatagtatccgtaatttaaaaataaaaa 16565970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 143 - 266
Target Start/End: Original strand, 35736178 - 35736301
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||    
T  35736178 gtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaatgaa 35736277  T
Q  243 gtgtgattgaagtattataggatc 266  Q
    |||||| |||||||||||| ||||    
T  35736278 gtgtgactgaagtattatatgatc 35736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 12541773 - 12541949
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttt-tctaaaataaatta 241  Q
    ||||||||||||||| ||||||||||||||      ||||| || || ||||| ||||||||||||||||||||||| || |||| ||||||||||||||    
T  12541773 gtgtgtttggattgagggtttaggaggggag-----gggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaatta 12541867  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaattta 323  Q
    |||| |||||||||| |||| |||| |||||||||||||| || ||||| ||||||||| |||| |||||||| ||||||||    
T  12541868 agtgcgattgaagtactatatgatcgtttatcatgttaatgtgttaactttttaaaaaacattttatagtatctgtaattta 12541949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 146 - 333
Target Start/End: Complemental strand, 31796002 - 31795820
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    |||||||||||| |||||||||||||||     ||||||| ||||||||| ||| ||||| ||||| || ||||||||||||| ||||||||||||||||    
T  31796002 tgtttggattgaaggtttaggaggggaa-----gggagggattaattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtg 31795908  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||| |||| |||||||||||  |||  ||  | || ||||||  ||||||||| ||||||||||||||| |||||    
T  31795907 tgattgaagtattatatgatcgtttatcatgttgttattttattttttaaaaaaacttttcatagtgtccgtaatttaaaaacgaaaa 31795820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 327
Target Start/End: Complemental strand, 28262642 - 28262500
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||  |||||||||| ||||| | |||| |||||||||||| |||     
T  28262642 gtttacttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatattacatgatcgtttatcatgttattata 28262543  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
     ||||| |||||||||||||||||||| | | |||||||||||    
T  28262542 ttaactttttaaaaaatatttcatagtgttcataatttaaaaa 28262500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 284
Target Start/End: Original strand, 2241414 - 2241554
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| |||| |||||||||| ||| ||||| ||||| ||||   || ||||||||||||||||||| | ||||||||||||||||||||    
T  2241414 gtgtgtttagattgagggtt-aggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaattaa 2241512  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    |||| |||||||||||||| |||  |||||||||||||||||    
T  2241513 gtgtaattgaagtattatatgattgtttatcatgttaatatg 2241554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 17379897 - 17379994
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaattt 322  Q
    ||||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  17379897 ttttctaaaataaattaagtgtgattggagtattatatgattgtttatcatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaattt 17379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 142 - 333
Target Start/End: Original strand, 34209463 - 34209657
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataaca------tgtttttctaaaat 235  Q
    ||||||||| ||||||||||||| |||||||| |||||  || ||||| || || |||||||||| | || ||||||| |      ||||||| |||||     
T  34209463 tgtgtgtttcgattgatggtttatgaggggaaaggaagtaagagtttacttctcttttttaaatttcagaatatataatactactatgtttttttaaaa- 34209561  T
Q  236 aaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
      |||||||||||||||||| ||||| |||  ||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||||||||    
T  34209562 --attaagtgtgattgaagtgttatatgattgtttatcatgttaatatgttaactttttaaaaaatatttcatagtgtttgtaatttaaaaatgaaaa 34209657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 274
Target Start/End: Original strand, 41841685 - 41841816
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | |||||||||| || ||| |||||||||| |||||| ||||||||||||  |||||||||||| |||| ||||||||||||||    
T  41841685 gtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaa 41841784  T
Q  243 gtgtgattgaagtattataggatcatttatca 274  Q
    | ||||||| ||||||||| |||  |||||||    
T  41841785 gggtgattggagtattatatgattttttatca 41841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 273
Target Start/End: Original strand, 41778776 - 41778906
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||||||| ||||    ||||||||| ||||  ||||| |||||||| |||||||||||||    
T  41778776 gtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaattaa 41778875  T
Q  243 gtgtgattgaagtattataggatcatttatc 273  Q
    ||||||||||||||||||| |||||||||||    
T  41778876 gtgtgattgaagtattatatgatcatttatc 41778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 197 - 345
Target Start/End: Original strand, 40022427 - 40022578
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgt--taatatgctaactcttt 294  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||  |||| ||| |  ||||||| | ||| |||    
T  40022427 tttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattatatgattgtttaacatattataatatgtttacttttt 40022526  T
Q  295 -aaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
     |||||| |||||||||| || |||||||||||||||||  | |||||||||    
T  40022527 aaaaaaacatttcatagtgtctgtaatttaaaaatgaaatgtaaaccctccc 40022578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 367
Target Start/End: Complemental strand, 42316909 - 42316781
Alignment:
Q  239 ttaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaa 338  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | ||||| ||||||||| |||||||||| |  | |||||||||||||||| | ||    
T  42316909 ttaagtgtgattgaagtattatatgatcgtttatcatgttaatacgttaactttttaaaaaacatttcatagtgtttgcaatttaaaaatgaaaagtaaa 42316810  T
Q  339 ccctccctcctaaaccgtccatccaaaca 367  Q
    | | |||| ||||||| ||||||||||||    
T  42316809 ctcccccttctaaaccttccatccaaaca 42316781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 149 - 275
Target Start/End: Original strand, 886927 - 887051
Alignment:
Q  149 ttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtga 248  Q
    |||| |||| ||||||||||||||| | ||||||||| ||| ||||| ||||||||||||  || |||||| ||| |||| |||||||||||| ||||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattac--acaatataaaatgcttttttaaaataaattatgtgtga 887024  T
Q  249 ttgaagtattataggatcatttatcat 275  Q
    ||||||||||||| |||||||||||||    
T  887025 ttgaagtattatatgatcatttatcat 887051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 31061362 - 31061497
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| | | ||||  ||||||||||||| || || ||| |||| ||| |||||||||||||    
T  31061362 gtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaattacgaacaatgtaaaatgtgtttttaaaataaattaa 31061461  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||| ||||||| ||||||||||||||||    
T  31061462 gtgtttttgaaatattatatgatcatttatcatgtt 31061497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 191 - 328
Target Start/End: Complemental strand, 37740085 - 37739949
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaac 289  Q
    ||||| |||||||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatcttaac 37739986  T
Q  290 tctttaaaaaatatttcatagtatccgtaatttaaaaat 328  Q
    | ||| ||||  | |||||||| | |||||||| |||||    
T  37739985 tttttgaaaa--acttcatagtgttcgtaattttaaaat 37739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 343
Target Start/End: Original strand, 9631565 - 9631763
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttcta---aaataaattaag 243  Q
    ||||||||||| ||||||| || | || ||||  |||| |||| ||||| |||||||| ||  ||||||||||||||||||| |    |||||||| |||    
T  9631565 gtttggattgaaggtttagaagagaaagggaaaagagg-tttacttttcttttttaaactatcgactatataacatgtttttttttttaaataaatcaag 9631663  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    ||||| ||||||||||||  ||| ||||||||||||||||| ||||| ||||||  | ||||||| || ||||||||||||||| ||||| | |||||||    
T  9631664 tgtgaatgaagtattatattatcgtttatcatgttaatatgttaactttttaaaggacatttcatggtgtccgtaatttaaaaacgaaaagttaaccctc 9631763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 346
Target Start/End: Complemental strand, 29525931 - 29525767
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggat--catttatcatgttaatat 283  Q
    |||| ||||| ||||||||| ||||| ||||||| |||||||| ||||||||||||| ||||||||||||||||||  ||    ||||||||||||||||    
T  29525931 tttatttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattatataatactttttatcatgttaatat 29525832  T
Q  284 gctaac--tctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccct 346  Q
    | ||||  ||   |||||| | ||||||||||| ||||||||||| |||||| ||||| ||||||    
T  29525831 gttaactttccaaaaaaaaaaattcatagtatcagtaatttaaaattgaaaagtgaacactccct 29525767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 345
Target Start/End: Original strand, 7681299 - 7681449
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaact 290  Q
    ||||||||||| ||||||||| ||||||| |  ||||| |||||||||||||||||||||||||||||||| |||| ||| |     ||  ||| |||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattatatgatcgtttgt----atatcatgttaact 7681394  T
Q  291 ctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
     || ||||||||||||||| |||||| ||||||||||| |||| | |||||||||    
T  7681395 tttaaaaaaatatttcataatatccgcaatttaaaaataaaaagtaaaccctccc 7681449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 45257310 - 45257442
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||||||| ||||||||||  | | ||||  ||| ||||||||| || || ||| |||||||  |||||||||||||    
T  45257310 gtgtgtttggattgagagtttaggaggggaaaggaagggaggactcacttttattttataaattacgaacaatgtaaaatgttttcttaaaataaattaa 45257409  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| |||||||||||||    
T  45257410 gtgtttttgaagtattatatgatcatttatcat 45257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 16713495 - 16713630
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| |||||| |||||||| ||||||||  ||| |||||| |||||||||||||| || |||||| || ||||| ||||| ||||||     
T  16713495 gtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatatttttttaaaagaaattat 16713594  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||||||   ||||||||||||||    
T  16713595 gtgtttttgaagtattatatattcatttatcatgtt 16713630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 1583223 - 1583305
Alignment:
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  1583223 taactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccctcccctcctaaaccctccatccaaaca 1583305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 6721820 - 6721726
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaa 280  Q
    |||| ||||| ||||||||  ||||| |||||| |||||||||||||||||||| ||||||||||||| |||||||  |||||||||||||||||    
T  6721820 tttagttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattatattatcatttatcatgttaa 6721726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 333
Target Start/End: Original strand, 12751885 - 12752008
Alignment:
Q  211 actatataacatgtttt-tctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcata 309  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||| ||||| || ||| |||  ||| | || |||||||||||||||    
T  12751885 actatataacatattttttctaaaataatttaagtgtgattgaagtattatatgatcgtttattatattattatattaatttttaaaaaaatatttcata 12751984  T
Q  310 gtatccgtaatttaaaaatgaaaa 333  Q
    || ||| |||||| |||| |||||    
T  12751985 gtgtccataattttaaaacgaaaa 12752008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 177 - 327
Target Start/End: Complemental strand, 39354381 - 39354231
Alignment:
Q  177 aagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatg 276  Q
    ||||||| ||||| ||||  ||||||||||||    |||||||||||||| ||||||||||| | |||||||||||||||||| | ||||  |||| |||    
T  39354381 aagggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtattacatgatcgattattatg 39354282  T
Q  277 ttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    ||| |||  ||| | ||| |||||||||||||| | | |||||||||||||    
T  39354281 ttattattttaatttttttaaaaatatttcataatgtgcgtaatttaaaaa 39354231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 31928286 - 31928149
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttcta-----aaataaatta 241  Q
    |||||||| || ||||||||||||||| ||||||||||| | | |||| |||||||||||||  || || ||| |||||||| |      ||||||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaattacaaacaatgtaaaatgtttttttttttttaaataaatta 31928187  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||  ||||||||||||| |||||||||||||||||    
T  31928186 agtgtttttgaagtattatatgatcatttatcatgtta 31928149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 346
Target Start/End: Original strand, 32503232 - 32503365
Alignment:
Q  213 tatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagta 312  Q
    |||||||||| ||||||||||||||||||||| ||||| || ||||||| ||| ||||||||| || ||||  ||||| |||| |||| |||| | | ||    
T  32503232 tatataacatatttttctaaaataaattaagtatgattaaaatattatatgattatttatcatctttatatattaactttttacaaaacattttacatta 32503331  T
Q  313 tccgtaatttaaaaatgaaaaatgaaccctccct 346  Q
    || ||| |||||||| ||||||| | ||||||||    
T  32503332 tctgtagtttaaaaaggaaaaataatccctccct 32503365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 27926668 - 27926748
Alignment:
Q  255 tattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
    ||||||| |||| ||||||||||||||||| ||||| |||||  || |||| |||||||||||||||||||||||||||||    
T  27926668 tattatatgatcgtttatcatgttaatatgttaactttttaaccaaaatttaatagtatccgtaatttaaaaatgaaaaat 27926748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 3094594 - 3094459
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| || || ||| |||| |  | | ||||  ||||||||||||  ||||| ||| ||||||||||||||||||||      
T  3094594 gtgtgtttggattgagggtttaggaaggaaagggaggggaagactcacttttattttttaaattacaaactatgtaaaatgtttttctaaaataaatttc 3094495  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||||||| ||| ||||||||||||    
T  3094494 gtgtttttgaagtattatatgattatttatcatgtt 3094459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 42296544 - 42296409
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| || |||||||||||| ||| | ||||||| | ||||  ||||||||||||| || || ||| || ||||| |||||| ||||||    
T  42296544 gtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacgaacgatgtaaaatatttttttaaaatgaattaa 42296445  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  || || ||||||| |||||||||| |||||    
T  42296444 gtgtttttaaattattatatgatcatttattatgtt 42296409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 17380082 - 17380013
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| |||||||||||||||  || |||| ||||| |||||||||||||||||||||||    
T  17380082 gtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggac 17380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 34187578 - 34187696
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  ||||||||| |||| | | |||| |||| | |||| |||||||||||||| || |  ||| |||||||  |||||||||||||    
T  34187578 gtgtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaattaa 34187677  T
Q  243 gtgtgattgaagtattata 261  Q
    ||||  |||||||||||||    
T  34187678 gtgtttttgaagtattata 34187696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 9592022 - 9591973
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgt 246  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9592022 tttttaaattacgcactatataacatgtttttctaaaatatattaagtgt 9591973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 22356245 - 22356176
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| | ||||||||||||| ||| ||||||||| | ||||| ||||||||||||||||    
T  22356245 gtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggac 22356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 23748336 - 23748267
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||| | |||||||||||||| |||||||    
T  23748336 gtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggac 23748267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 36046207 - 36046276
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||||||  || ||||| ||||| ||||||||||||||||||||||    
T  36046207 gtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggac 36046276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 2381228 - 2381093
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||||||||  |||||| ||||| |  ||| ||||| ||| | ||||  ||||||||||||| || || ||| |||||||| |||||||||||||    
T  2381228 gtgtatttggattgtgggtttatgagggaatgggaggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaa 2381129  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||||||  |||||  ||||||||    
T  2381128 gtgtttttgaagtattatatcatcatcaatcatgtt 2381093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 275
Target Start/End: Original strand, 33265615 - 33265741
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtg 247  Q
    |||||||||| ||||||||||||||| ||| | || |  | | ||||  ||||||||||||| || || ||| |  ||||| |||||||||||||||||     
T  33265615 tttggattgagggtttaggaggggaagggaggcgatgactcatttttattttttaaattacgaacaatgtaaaacattttt-taaaataaattaagtgtt 33265713  T
Q  248 attgaagtattataggatcatttatcat 275  Q
     ||||||||||||| |||||||||||||    
T  33265714 tttgaagtattatatgatcatttatcat 33265741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 9427227 - 9427142
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    ||||||||||||||| |||| ||||||| ||   | || ||||||| |||||||||||||||||||||||  ||||| ||||||||    
T  9427227 gtgtgtttggattgagggttcaggagggaaactaacggaagggtttgattttcatttttaaattacggacactataaaatgttttt 9427142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 278
Target Start/End: Original strand, 45098250 - 45098307
Alignment:
Q  221 atgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||| ||| |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  45098250 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 45098307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 8426899 - 8426951
Alignment:
Q  160 gtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||| ||||    
T  8426899 gtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggac 8426951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 17379849 - 17379901
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttc 195  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||    
T  17379849 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttc 17379901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 31061598 - 31061543
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcattttt 201  Q
    |||||||||||| ||||||||||||||||||| |||||| |||| ||||| |||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttt 31061543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 279
Target Start/End: Original strand, 35325353 - 35325408
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||| ||||||||||||||| |  ||||||||||||| |||||||||||||||||    
T  35325353 tttttttaaaataaattaagtatttttgaagtattatatgatcatttatcatgtta 35325408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 197 - 274
Target Start/End: Complemental strand, 15085888 - 15085810
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaa-taaattaagtgtgattgaagtattataggatcatttatca 274  Q
    ||||||||||||| || |||||| || |||||  |||| ||||||||||||  ||||||||||||| ||||||||||||    
T  15085888 tttttaaattacgaacaatataaaatattttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatca 15085810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 18811413 - 18811467
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||| |||||||||||||||||||||||| ||||||| |||  ||||||||||||    
T  18811413 ttttttaaaataaattaagtgtgattgaaatattatatgattgtttatcatgtta 18811467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 20545799 - 20545848
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||||||| |||||||||||||||||| ||| |||| ||||||||    
T  20545799 taaaataaattaaatgtgattgaagtattatatgattatttctcatgtta 20545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 21502087 - 21502171
Alignment:
Q  196 atttttaaattacggactatataacatgtttttct--aaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||||| || |||||| || ||||| |  ||||||||||||||||  ||||||||||||| || |||||||| ||||    
T  21502087 atttttaaattacgaacaatataaaatattttttttaaaaataaattaagtgtttttgaagtattatatgaccatttatcttgtt 21502171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 22356022 - 22356086
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattata 261  Q
    ||||||||||||| || || ||| |||||||| ||||||| |||||||||  |||||||||||||    
T  22356022 tttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattata 22356086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 36347544 - 36347612
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||||||  | ||||||||||||||| ||||| ||| ||| | |||||||||||| ||||||||    
T  36347544 gtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacgga 36347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 44966635 - 44966720
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||||||||  |||  ||||| ||||||||  |||||||||||||||||| ||||||| | ||  |||||| ||||||||    
T  44966635 ttttcatttttaaattatagacactataaaatgttttt--aaaataaattaagtgtgaatgaagtactgtataatcattaatcatgtt 44966720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 40022614 - 40022523
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaa 234  Q
    ||||| |||||| || |||||| |||| ||| ||| |||||||||||  ||||||||||||||||| |||  ||| | |||||||| |||||    
T  40022614 gtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaa 40022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 1052943 - 1052861
Alignment:
Q  197 tttttaaattacggactatataacatgtttttcta-aaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| || || ||| |||||||| |  ||||||||||| |||  ||||| ||||||| ||||||||||||||||    
T  1052943 tttttaaattacgaacaatgtaaaatgtttttttttaaataaattaaatgtttttgaaatattatacgatcatttatcatgtt 1052861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 887335 - 887266
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    ||||||||||||||| ||| ||||| | ||| ||||| |||||||||||||||   ||||| ||||||||    
T  887335 ggtttaggaggggaagggaggggagcgcttacttttcttttttaaattacggatgctataaaatgttttt 887266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 1270515 - 1270394
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaattaagtg 245  Q
    ||||||||||| | |||||||||  || ||| ||||||| | | ||||  ||||||||||||| || || ||| ||| ||||| | ||||||||||||||    
T  1270515 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaattaagtg 1270416  T
Q  246 tgattgaagtattataggatca 267  Q
    |  ||||||| ||||| |||||    
T  1270415 tttttgaagtgttatatgatca 1270394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 9631801 - 9631732
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||| || |||   ||||||| | ||||| ||||||||||||||||    
T  9631801 gtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggac 9631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 21662368 - 21662323
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattataggatcattt 270  Q
    |||| |||||| |||||||| |||||||||||||||| ||||||||    
T  21662368 ttttttaaaatcaattaagtttgattgaagtattatatgatcattt 21662323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 31795772 - 31795841
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||| |||| ||| ||| ||||||  ||| ||||| ||||||||||||||||    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggac 31795841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 35736428 - 35736359
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||| ||| ||| ||||||| | | ||||| |||||||||| |||||    
T  35736428 gtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggac 35736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 887210 - 887254
Alignment:
Q  234 ataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| | ||||||||||||||||||| |||| |||||||||||    
T  887210 ataaatcatgtgtgattgaagtattatatgatcgtttatcatgtt 887254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 2241658 - 2241590
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||  | |||||||| |||||| | | ||||| ||||| ||||||||||||||||| ||||    
T  2241658 tgtgtttggatgaagggtttaggtggggaaagaaggggagagtttatttttcatttttaaattatggac 2241590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 14196879 - 14196808
Alignment:
Q  174 tggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgt 246  Q
    |||| ||||||| ||| ||||| ||||||||||||| ||  ||||| |||||||| ||||||||| |||||||    
T  14196879 tggaggggagggcttacttttcttttttaaattacgaacactataaaatgttttt-taaaataaactaagtgt 14196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 22356177 - 22356209
Alignment:
Q  313 tccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||||||||||||| |||||||||||||||||    
T  22356177 tccgtaatttaaaaaagaaaaatgaaccctccc 22356209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 36566874 - 36566922
Alignment:
Q  164 aggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||| ||| | |||| |||| ||||||||||||||||||||||    
T  36566874 aggaggggaagggatgagaggatttacttttcatttttaaattacggac 36566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 45257548 - 45257480
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    |||||||||||| || | ||||||| ||||| ||| | || |||||| ||||| |||||||||||||||    
T  45257548 gtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacgga 45257480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 5e-72; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 143 - 344
Target Start/End: Complemental strand, 33655349 - 33655148
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||  || | ||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaa 33655250  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  33655249 gtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccct 33655150  T
Q  343 cc 344  Q
    ||    
T  33655149 cc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 24970406 - 24970216
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||    ||| || || ||||  ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  24970406 gtgtgtttggattgagggtttaggagggtttaggagggaagagtttgtttttcttttttaaattatggattatataacatgtttttctaaaataaattaa 24970307  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24970306 gtgtgattgaagtattatatgatcgtttatcaagttaatatgttaactttttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 24970216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 169 - 333
Target Start/End: Complemental strand, 41497172 - 41497008
Alignment:
Q  169 gggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcat 268  Q
    ||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  41497172 gggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattatatgatcat 41497073  T
Q  269 ttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||| ||| | ||||||||| ||||| || | |||||||||||||||| ||||    
T  41497072 ttatcatgttaatatgttaaatttttaaaaaacatttcctattgtccgtaatttaaaaataaaaa 41497008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 1051739 - 1051539
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| | |||| |||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||    
T  1051739 gtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaattaa 1051640  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||| |||||| |||  ||||||||| ||||||| ||||| ||||||||| ||||||| || ||||||||||||||||||||  | ||||||    
T  1051639 gtgtgattgaagcattatatgattgtttatcatg-taatatgttaactttttaaaaaacatttcat-gtgtccgtaatttaaaaatgaaatgttaaccct 1051542  T
Q  343 ccc 345  Q
    |||    
T  1051541 ccc 1051539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 47390858 - 47391049
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| || |||||||||||| |||  |||||||||| ||||| ||||||||||| | |||||||||||||||||||||||||| |||||    
T  47390858 gtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaa 47390957  T
Q  243 gtgtgattgaagtattatagga-tcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     |||||||||||||||||| || |  ||||||||||||||||| ||||  |||||||||| ||| ||||| |||||||||||||||||||||    
T  47390958 ttgtgattgaagtattatatgacttgtttatcatgttaatatgttaacattttaaaaaatgttttatagtgtccgtaatttaaaaatgaaaa 47391049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 39856106 - 39855975
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39856106 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaa 39856007  T
Q  243 gtgtgattgaagtattataggatcatttatca 274  Q
    |||||| | |||||||||| ||||||||||||    
T  39856006 gtgtgacttaagtattatatgatcatttatca 39855975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 185 - 333
Target Start/End: Complemental strand, 34235207 - 34235058
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||| |||||||    
T  34235207 gtttacttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcatattaatat 34235108  T
Q  284 gctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | ||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  34235107 gttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaa 34235058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 142 - 333
Target Start/End: Original strand, 43230238 - 43230428
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    |||||||||||||||  |||||| ||| | || | | ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  43230238 tgtgtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaatta 43230337  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||| |||||||| |||||| |||| ||||||||||||||||| ||||| || |||||| | |||| ||| |||||||||||||||| ||||    
T  43230338 agtgcgattgaagaattatacgatcgtttatcatgttaatatgttaacttttaaaaaaaaaattca-agtgtccgtaatttaaaaataaaaa 43230428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 328
Target Start/End: Complemental strand, 13771187 - 13771004
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| ||||||||||||||| ||| | ||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  13771187 gtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaattaa 13771088  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaat 328  Q
    ||||||||  ||| |||||  ||  ||||||||||||||||| ||||| |||  | ||||||| ||||| ||||||||||||||||    
T  13771087 gtgtgattcgagtgttatatcattgtttatcatgttaatatgttaacttttt--ataatattttatagtgtccgtaatttaaaaat 13771004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 332
Target Start/End: Original strand, 25887195 - 25887385
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| |||||||| ||| |||||| |||  ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  25887195 gtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaattaa 25887294  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctt-taaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    ||||||||| ||||||||| |||  |||||||| |||||||| ||||| ||  |||||| |||||||  | | ||||||||||||||||||    
T  25887295 gtgtgattggagtattatatgattgtttatcatattaatatgttaacttttaaaaaaaacatttcatgattttcgtaatttaaaaatgaaa 25887385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 40196732 - 40196572
Alignment:
Q  184 ggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    |||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||| ||||    
T  40196732 ggtttactttttgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatcaggttgatat 40196633  T
Q  284 gctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctcc 344  Q
    | ||||| |||| |||| |||| ||||| ||||||||| ||||||||||| | ||||||||    
T  40196632 gttaactttttataaaacattttatagtgtccgtaattcaaaaatgaaaagtaaaccctcc 40196572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 34228560 - 34228381
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga-ctatataacatgtttttctaaaataaatta 241  Q
    ||||||||| ||||| ||||||||||| ||| ||| |||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  34228560 gtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaatta 34228461  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatt 321  Q
    |||||||||||||||||||| |||   ||||||| |||||||| ||||| ||| | |||   |||||||| |||||||||    
T  34228460 agtgtgattgaagtattatatgattgcttatcatattaatatgttaacttttttataaaacattcatagtgtccgtaatt 34228381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 372
Target Start/End: Complemental strand, 40572474 - 40572246
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| |||||||| | |||  | | |||  ||||  |||| |||||||||||||||||| |||||| |||||||||||||||    
T  40572474 gtgtgtttggattgagggtttaagaggggaaagaaagaaaag-tttgtttttatttttaaaattacggactatataatatgtttctctaaaataaattaa 40572376  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    | |||||| |||||||||| || | ||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||  | ||| ||    
T  40572375 gcgtgattaaagtattatatgaccttttatcatgttaatatgttaact-tttaaaaaatattttatagcatccgtaatttaaaaatgaaatctaaactct 40572277  T
Q  343 -ccctcctaaaccgtccatccaaacatacct 372  Q
     |||| ||||| | |||||||||||| ||||    
T  40572276 ccccttctaaatcctccatccaaacacacct 40572246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 333
Target Start/End: Original strand, 42306376 - 42306523
Alignment:
Q  182 agggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaat 281  Q
    ||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||||||| |    ||||| | ||||||    
T  42306376 agggtttgattttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattatatg----tttatgaggttaat 42306471  T
Q  282 atgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  42306472 atgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 42306523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 367
Target Start/End: Original strand, 17852910 - 17853098
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||    
T  17852910 gggagggattacttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattatatgatcgtttatcatgtt 17853009  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
      |||  || || |||||||| | |||||||||   ||||||||||||||||||| | | |||| |||||||||||| ||||||||||||    
T  17853010 gttattttatctttttaaaaact-tttcatagtgctcgtaatttaaaaatgaaaagtaagccctcccctcctaaaccctccatccaaaca 17853098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 179 - 311
Target Start/End: Complemental strand, 37417838 - 37417706
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||| ||||||||||     
T  37417838 gggatggtttacttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattatatgatcgtttatcatgtg 37417739  T
Q  279 aatatgctaactctttaaaaaatatttcatagt 311  Q
    |||||| ||||| |||| |||| ||||||||||    
T  37417738 aatatgttaactttttagaaaacatttcatagt 37417706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 332
Target Start/End: Original strand, 41008188 - 41008375
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaattaagt 244  Q
    |||||||||||| |||||  |||||||| ||| |||||  |||  ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagt 41008287  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactcttta--aaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    ||||||||||  ||||| |||  ||||||||||||||||| ||||| || |  | ||| |  ||||||||||||||||||||||||||||    
T  41008288 gtgattgaag--ttatatgattgtttatcatgttaatatgttaacttttgaagacaaaaaaatcatagtatccgtaatttaaaaatgaaa 41008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 22163272 - 22163167
Alignment:
Q  221 atgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaat 320  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||| | ||||||| |||||||||| ||||||||    
T  22163272 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatg-ttactttctaaaaaacatttcatagtgtccgtaat 22163174  T
Q  321 ttaaaaa 327  Q
    |||||||    
T  22163173 ttaaaaa 22163167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 221 - 327
Target Start/End: Complemental strand, 22221980 - 22221875
Alignment:
Q  221 atgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaat 320  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||| | ||||||| |||||||||| ||||||||    
T  22221980 atgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatg-ttactttctaaaaaacatttcatagtgtccgtaat 22221882  T
Q  321 ttaaaaa 327  Q
    |||||||    
T  22221881 ttaaaaa 22221875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 143 - 283
Target Start/End: Complemental strand, 31571711 - 31571569
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataa-att 240  Q
    ||||||||||||||| |||||||||||||||  || ||||| ||||| ||||| |||||||||||||||| |||||||||| ||||| ||||| || |||    
T  31571711 gtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaatatt 31571612  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    |||||||||||||||||||||  ||  ||||||||||||||||    
T  31571611 aagtgtgattgaagtattatataattgtttatcatgttaatat 31571569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 26365770 - 26365961
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagg-gagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||| ||||||||||||| | || ||  ||| ||||| ||||| |||||| |||||  |||||||||||| ||||||||||||||| ||    
T  26365770 gtgtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaataaacta 26365869  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     ||||||||||||||||||| |||  ||| |||||||| |||  ||| | |  |||||||||||  |||||||| ||||||||||| |||||    
T  26365870 ggtgtgattgaagtattatatgattgtttctcatgttattattttaattttaaaaaaaatattttgtagtatccataatttaaaaacgaaaa 26365961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 345
Target Start/End: Complemental strand, 4833703 - 4833570
Alignment:
Q  212 ctatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagt 311  Q
    |||||||||||||  || ||||||||||||| ||||||| |||||||||| |||  ||||||||||||||| | ||||| |||| |||| ||||||||||    
T  4833703 ctatataacatgtaattttaaaataaattaaatgtgatttaagtattatatgattgtttatcatgttaataggttaactttttataaaacatttcatagt 4833604  T
Q  312 atccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
     || |||||||||||||||||| | |||||||||    
T  4833603 gtctgtaatttaaaaatgaaaagtaaaccctccc 4833570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 33519053 - 33519186
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    |||||||||| || | ||||||||||||| ||| ||||||| | | ||||  ||||||||||||| || |||||| |||||||| | |||||||||||||    
T  33519053 gtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaattaagt 33519152  T
Q  245 gtgattgaagtattataggatcatttatcatgtt 278  Q
    ||  ||||||||||||| ||||||||||||||||    
T  33519153 gtttttgaagtattatatgatcatttatcatgtt 33519186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 42087041 - 42087190
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgc 285  Q
    |||| ||||| |||| |||||||| | |||||||||| || || ||||||||||||||||| |||||| |||||||  ||| ||| ||| ||||||||||    
T  42087041 tttatttttctttttaaaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattatataatcgtttgtcacgttaatatgc 42087140  T
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
    ||||| |||||||||  ||  ||| || ||||||||||||||||||||||    
T  42087141 taactttttaaaaaactttgtataatacccgtaatttaaaaatgaaaaat 42087190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 205 - 333
Target Start/End: Complemental strand, 45940835 - 45940707
Alignment:
Q  205 ttacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatt 304  Q
    |||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  |||  |||| |||||||||| ||| || | ||||||| |||    
T  45940835 ttacagactatataacatatttttctaaaataaattaaatgtaattgaagtattatattatcgcttattatgttaatatactatctttgtaaaaaacatt 45940736  T
Q  305 tcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||| |||||||| ||||||| ||||    
T  45940735 tcatagtgtccgtaatataaaaataaaaa 45940707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 10315719 - 10315828
Alignment:
Q  226 tttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaa 325  Q
    |||||||||||||   ||||||||||||||||||||  ||| |||||| |||||||||| ||| | ||||||||| |||||||||| |||||| ||||||    
T  10315719 tttctaaaataaacccagtgtgattgaagtattatataatcgtttatcttgttaatatgttaaatttttaaaaaacatttcatagtgtccgtattttaaa 10315818  T
Q  326 aatgaaaaat 335  Q
    ||||||||||    
T  10315819 aatgaaaaat 10315828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 37925844 - 37925979
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||| | ||||  ||||||||||||| || || ||| |||||||| | ||||| |||||    
T  37925844 gtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagattaa 37925943  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||||||  |||||  ||||||||    
T  37925944 gtgtttttgaagtattatatcatcatcaatcatgtt 37925979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 18231693 - 18231779
Alignment:
Q  247 gattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||||||| |  ||||||||||||||||||    
T  18231693 gattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtttgtaatttaaaaatgaaaa 18231779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 42306571 - 42306502
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| |||||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggac 42306502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 146 - 335
Target Start/End: Original strand, 48151990 - 48152175
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    ||||| |||||| ||||||| || ||||  |||| ||  |||||  |||| ||||||||||||||    |||||||||||||||||||||||||| ||||    
T  48151990 tgttttgattgagggtttagaagaggaaatgaagagaatgtttacctttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtg 48152085  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaa----aaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
    |||||||||||||| | |||||||||| |||||| |||  |||   ||||||    | |||||||||||||| | |||||||||||||||||||    
T  48152086 tgattgaagtatta-atgatcatttattatgttagtattttaa---tttaaaatatatatatttcatagtatgcataatttaaaaatgaaaaat 48152175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 18795835 - 18795701
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||| ||||||| ||| |||| || || |||||| ||||||||||||| || |||||| |||||||| ||||| |||| ||    
T  18795835 gtgtgtttggattgagagtttagaaggggaa-ggaggggaaggcttgattttcttttttaaattacgaacaatataaaatgtttttttaaaacaaatcaa 18795737  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||| |||||| |||| || |||||||||| |||||    
T  18795736 gtgttattgaattattgtacgatcatttattatgtt 18795701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 340
Target Start/End: Complemental strand, 13425273 - 13425164
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatga 330  Q
    |||||||||||||||||| |||||||| ||| |||  ||||||||||||||||| | ||| || |||||||||||  |||| || ||||||||||||| |    
T  13425273 aaaataaattaagtgtgaatgaagtataatatgattgtttatcatgttaatatgttgacttttgaaaaaatattttgtagtgtctgtaatttaaaaataa 13425174  T
Q  331 aaaatgaacc 340  Q
    ||||| ||||    
T  13425173 aaaataaacc 13425164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 36267794 - 36267662
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| | | ||||  ||||||||||||   | || ||| ||||||||  |||||| | |||    
T  36267794 gtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattacaaccaatgtaaaatgttttttcaaaatatagtaa 36267695  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| |||||||||||||    
T  36267694 gtgtttttgaagtattatatgatcatttatcat 36267662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 37620777 - 37620912
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||| ||||||||| ||| ||||| ||| | |||| ||||| |||||| | || || ||| ||| |||| |||||||||||||    
T  37620777 gtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaattaa 37620876  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
     |||  |||||||||||||  ||| |||||||||||    
T  37620877 atgtttttgaagtattatataatcttttatcatgtt 37620912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 18063721 - 18063667
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18063721 tttttttaaaataaattaagtgtgattgaagtattatatgatcatttatcatgtt 18063667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 23116420 - 23116275
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaata-tttcatagtatccgtaattt 322  Q
    ||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||  |||   || | ||||| ||| | ||| ||||| || |||||||    
T  23116420 tttttttaaaaaaaattaagtgtgattgaagtattatataatcatttatcatgttgctatttcaattttttaataaacacttttatagtgtctgtaattt 23116321  T
Q  323 aaaaatgaaaaatgaaccctccc-tcctaaaccgtccatccaaaca 367  Q
    ||||| ||||| | | ||||||| ||||||||| ||||||||||||    
T  23116320 aaaaaagaaaagtaagccctcccttcctaaaccctccatccaaaca 23116275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 19262048 - 19261945
Alignment:
Q  174 tggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatc 273  Q
    |||| ||||||| ||| |||||| ||||||||||| |||| | ||| |||||||   |||||||||||| ||||||||||||| |||| |||||||||||    
T  19262048 tggaggggagggcttacttttcaattttaaattacagactctttaaaatgttttga-aaaataaattaattgtgattgaagtactatatgatcatttatc 19261950  T
Q  274 atgtt 278  Q
    |||||    
T  19261949 atgtt 19261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 238
Target Start/End: Complemental strand, 23029571 - 23029480
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaa 238  Q
    ||||||||| |||||| ||||||||||| |||     | ||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||    
T  23029571 tgtgtgtttcgattgaaggtttaggaggtgaa-----gagagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaa 23029480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 48093977 - 48094121
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaattta 323  Q
    ||||| |||||||||||||||||| || |||||||||| ||||||||||||| ||| |||   || ||| ||||||| |||| ||||  | |||||||||    
T  48093977 tttttttaaaataaattaagtgtggttaaagtattatatgatcatttatcattttattatttcaattctataaaaaagattttatagcgttcgtaattta 48094076  T
Q  324 aaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    |||| ||||| | || ||| |||||||||| | | ||||||||||    
T  48094077 aaaaagaaaagtaaatcctcccctcctaaatcctacatccaaaca 48094121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 333
Target Start/End: Complemental strand, 32872939 - 32872832
Alignment:
Q  226 tttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaa 325  Q
    ||||||||||||||||||| | ||||||  || ||| ||   ||||||||||||||||| ||||| |||||||| ||||| ||| ||| |||||||||||    
T  32872939 tttctaaaataaattaagtttaattgaaagatgatatgagtgtttatcatgttaatatgttaactttttaaaaagtattttataatattcgtaatttaaa 32872840  T
Q  326 aatgaaaa 333  Q
    || |||||    
T  32872839 aaagaaaa 32872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 4833537 - 4833599
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    ||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||    
T  4833537 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattac 4833599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 278
Target Start/End: Original strand, 21857349 - 21857485
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||| || ||||||| ||||||| |||   ||| ||| | ||||  ||||||||||| | || |||||| ||  |||| ||||||||||||    
T  21857349 tgtgtgtttggatcgaaggtttagaaggggaagggagtagagagttcatttttattttttaaattaagaacaatataaaatccttttttaaaataaatta 21857448  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||  ||||| |||| || ||||||||||||||||    
T  21857449 agtgtttttgaaatattgtatgatcatttatcatgtt 21857485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 36267556 - 36267624
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    |||||||||||| || ||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||||    
T  36267556 gtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacgga 36267624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 40196535 - 40196619
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttt 227  Q
    |||||||||||| || ||||| ||||||||| |||  |||||||||| ||||||||||| ||||||||||  ||||| |||||||    
T  40196535 gtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgtttt 40196619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 48013522 - 48013641
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 258  Q
    ||||||||||||||| ||| ||||| |||   |||| |||||||||||||| || || ||| |||||||| |||||||||||||||||  |||||  |||    
T  48013522 ggtttaggaggggaagggaggggagcgttcgctttt-atttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaaaatt 48013620  T
Q  259 -ataggatcatttatcatgtt 278  Q
     ||| ||||||||||||||||    
T  48013621 catatgatcatttatcatgtt 48013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 18127390 - 18127347
Alignment:
Q  236 aaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  18127390 aaattaagtgtgattgaagtattatatgatcatttatcatgtta 18127347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 20393693 - 20393740
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  20393693 aaataaattaagtgtgattgaagtattatatgatcatttataatgtta 20393740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 38378096 - 38378183
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||| |||| ||||||||||||||||||  ||||||||| || ||| ||||| |||||||| |||| ||||| |||||    
T  38378096 ttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattatatgatcgtttattatgtt 38378183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 13770951 - 13771020
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| | ||||||||||||| ||| |||||| |||| || | |||||||||||||||||    
T  13770951 gtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggac 13771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 18231827 - 18231762
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| ||  |||||||||||||| ||| |||||| |||| ||||||||||||||||||    
T  18231827 gtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattac 18231762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 41496960 - 41497029
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| |||| | |||| |||| |||||||||||||||||    
T  41496960 gtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggac 41497029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 47391097 - 47391028
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||| |||||||| ||| ||||| ||||  ||||||||||||||||||||||    
T  47391097 gtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggac 47391028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 48881561 - 48881630
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| |||| || ||| ||||| ||||||||||||||||    
T  48881561 gtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggac 48881630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 10315652 - 10315712
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaat 239  Q
    |||||| |||| ||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  10315652 gggaggatttacttttcttttttaaatttcagactatataacatatttttctaaaataaat 10315712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 40282203 - 40282263
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatt 206  Q
    |||||||||||| ||||||||||||||| |||  ||||||||| |||||| ||||||||||    
T  40282203 tgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 39646472 - 39646607
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||| |||| ||| ||||||  | | ||||  ||||||||||| | || || ||| || | ||| |||||||||||||    
T  39646472 gtgtgtttggattgacggtttaggagaggaagggaggggaggaatcacttttattttttaaattatgaacaatgtaaaatatatttttaaaataaattaa 39646571  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
     |||  |||||||||||||  |||||  ||||||||    
T  39646572 ctgtttttgaagtattatatcatcatcaatcatgtt 39646607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 333
Target Start/End: Complemental strand, 30891165 - 30891045
Alignment:
Q  213 tatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa---atatttcata 309  Q
    ||||||| |||||||| |||| |||||||| ||||||||||||||||||  ||| ||||| || |||||||  | | | || |||||   |||||| |||    
T  30891165 tatataatatgtttttttaaa-taaattaaatgtgattgaagtattatattatcgtttattatattaatat--ttaattttaaaaaatatatattttata 30891069  T
Q  310 gtatccgtaatttaaaaatgaaaa 333  Q
    || |||||||||||||||||||||    
T  30891068 gtgtccgtaatttaaaaatgaaaa 30891045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 1051519 - 1051572
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||||||| || ||||||||| |  |||||||||||||||||||||    
T  1051519 ggtttaggaggggaatagaggggagggttaacatttcatttttaaattacggac 1051572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 28074106 - 28074175
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||||   | | ||||| ||||||||||||||||    
T  28074106 gtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggac 28074175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 33519289 - 33519224
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || ||||||||||||||| ||| ||||||| ||| ||||| | ||||||||||    
T  33519289 gtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattac 33519224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 35422021 - 35422102
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||  || || ||| |||||||| |||||||||||||||||  ||||||||| ||| ||| |||||| |||||    
T  35422021 tttttaaattacaaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtatcatatgattatttattatgtt 35422102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 47229973 - 47229888
Alignment:
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaat 328  Q
    ||||||||||| ||||| | |||  ||||||||||||||||| |  || ||||| |||||||||||| || ||||| |||||||||    
T  47229973 gtgtgattgaattattacatgattgtttatcatgttaatatgttcgctttttaagaaatatttcataatacccgtagtttaaaaat 47229888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 3143564 - 3143615
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||| ||||||||||||||| |  ||||||||||||| |||||||||||||    
T  3143564 tttttataaaataaattaagtttttttgaagtattatatgatcatttatcat 3143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 7791802 - 7791857
Alignment:
Q  223 gtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||| ||||||||| ||||||| |||||||||| ||| ||||||||||||    
T  7791802 gtttttttaacataaattaaatgtgatttaagtattatatgattatttatcatgtt 7791857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 37930005 - 37929919
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| ||||||||||||  || | ||||  ||||||| ||||||||||||| ||| ||||||||||||||  ||||||| |||||||    
T  37930005 ttttcttttttaaattactaacaaaataatgtgttttt-taaaataaattaaatgtaattgaagtattataaaatcatttgtcatgtt 37929919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 278
Target Start/End: Complemental strand, 12670988 - 12670942
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||| ||||||||||  ||||||||||||| ||||||||||||||||    
T  12670988 aaatgaattaagtgtttttgaagtattatatgatcatttatcatgtt 12670942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 13425123 - 13425188
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaag-ggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || ||||||||||||||| ||||| ||| |||||| |||| |||||||||||||    
T  13425123 gtgtgtttggatagagggtttaggaggggaa-ggaagaggatggtttattttttatttttaaattac 13425188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 25887418 - 25887368
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    ||||||||||||||| ||| ||||| |||||  ||||||||||||||||||    
T  25887418 ggtttaggaggggaagggaggggagagtttacatttcatttttaaattacg 25887368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 28074255 - 28074213
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    |||||||||||||||  ||||||||||||| ||||||||||||    
T  28074255 aaataaattaagtgtttttgaagtattatatgatcatttatca 28074213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 35422198 - 35422136
Alignment:
Q  150 tggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||| |||||||||||| ||| ||  |||||||||| ||||| |||| |||||||||||    
T  35422198 tggattgagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggac 35422136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 37562736 - 37562774
Alignment:
Q  240 taagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  37562736 taagtgtgattgaagtattatatgatcaattatcatgtt 37562774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 30592256 - 30592321
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||| ||||||| || | |||||||||| || ||||||||||| ||| ||||| ||||||||||||    
T  30592256 gtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattac 30592321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Original strand, 16833786 - 16833834
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||| |||||||||||  ||||||||||| | |||||||||||||||||    
T  16833786 aaaaaaaattaagtgtttttgaagtattacatgatcatttatcatgtta 16833834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 26079975 - 26080046
Alignment:
Q  197 tttttaaattacggactatat--aacatgtttttctaaaataaattaagtgtgattgaagtattataggatc 266  Q
    ||||| |||||| ||||||||  ||||| ||||| ||||||||||| | |||||||||| ||||||| ||||    
T  26079975 ttttttaattacagactatatttaacatatttttttaaaataaatttaatgtgattgaaatattatatgatc 26080046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 26103762 - 26103833
Alignment:
Q  197 tttttaaattacggactatat--aacatgtttttctaaaataaattaagtgtgattgaagtattataggatc 266  Q
    ||||| |||||| ||||||||  ||||| ||||| ||||||||||| | |||||||||| ||||||| ||||    
T  26103762 ttttttaattacagactatatttaacatatttttttaaaataaatttaatgtgattgaaatattatatgatc 26103833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 33519449 - 33519401
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||||||||||||||||||||||||| |   ||||||||||||    
T  33519449 taaaattaattaagtgtgattgaagtattatatgcaaatttatcatgtt 33519401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 212
Target Start/End: Original strand, 33655148 - 33655180
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||| ||||||||||||||||||||||    
T  33655148 ggagggtttacttttcatttttaaattacggac 33655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 39431 - 39226
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||| |||| || ||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  39431 gtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaa 39332  T
Q  243 gtgtgatt---gaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaac 339  Q
    ||||||||   ||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||| | |||    
T  39331 gtgtgattgaagaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaac 39232  T
Q  340 cctccc 345  Q
    ||||||    
T  39231 cctccc 39226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 39189 - 39259
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaaggg-agggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||||||  || ||| |||||||| ||||||||||||||||||||||    
T  39189 gtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggac 39259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 8e-68; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 7544139 - 7544329
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  7544139 gtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaa 7544238  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||  ||||| ||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  7544239 gtgtgattgaagtattatatgattgtttattatgttaatatgctaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaa 7544329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 13634714 - 13634904
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||     
T  13634714 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattat 13634813  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||| ||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||||||| | |||||||||||||||||||    
T  13634814 gtgtgattgaattattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgttcgtaatttaaaaatgaaaa 13634904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 16938482 - 16938684
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||  ||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  16938482 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaattaa 16938581  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||||| || |||||||||||||||||  | ||||||    
T  16938582 gtgtgattgaaatattatatgatcatttatcatgttaacatgttaactctttaaaaaacatttcatagtgtcagtaatttaaaaatgaaatctaaaccct 16938681  T
Q  343 ccc 345  Q
    |||    
T  16938682 ccc 16938684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 26414896 - 26415086
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| |||||    
T  26414896 gtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaa 26414995  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| | || ||||||||||||||||| ||||| |||| |||| |||||||||| || |||| |||||||||||||    
T  26414996 gtgtgattgaagtattatatggtcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaacttaaaaatgaaaa 26415086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 144 - 367
Target Start/End: Complemental strand, 10072887 - 10072663
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||| |||||||||||| ||||| || ||| | || | |||| ||||| |||||||||||| |||  |||||||||||||||||||||||||||||    
T  10072887 tgtgtttgaattgatggtttaagagggaaaaggaggagaagatttacttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaag 10072788  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct- 342  Q
    | |||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||  |  |||||||| ||||||| | ||||||     
T  10072787 tatgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatatttcatagtactcacaatttaaatatgaaaagtaaaccctc 10072688  T
Q  343 ccctcctaaaccgtccatccaaaca 367  Q
    ||||| |||||| ||||||||||||    
T  10072687 ccctcttaaaccctccatccaaaca 10072663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 4373807 - 4373617
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| |||||   |  ||||| |||| ||||| ||||||||||||||||||||||||| ||||||  ||||||||||||    
T  4373807 gtgtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaa 4373708  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||| ||||||| |||||||||||||||||||||| ||||| || ||||||||||||| ||| |||||||||||||||| ||||    
T  4373707 gtgtgattgaaatattatatgatcatttatcatgttaatatgttaacttttaaaaaaatatttcacagtgtccgtaatttaaaaattaaaa 4373617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 28279718 - 28279527
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaatta 241  Q
    |||||||||||||||  || ||  ||||||| ||| | ||||||||| ||||| ||||||||||| ||| |||||||||||||||| |||||||||| ||    
T  28279718 gtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaacta 28279619  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||| | ||| |||||||||||||||||    
T  28279618 agtgtgattgaagtattatatgatcatttatcatgttaatatgttaactttttaaaaaacatttcataatgtccataatttaaaaatgaaaa 28279527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 145 - 339
Target Start/End: Original strand, 36363037 - 36363231
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    ||||||||||||| ||||||| ||||||||||| ||||| ||||||||||| | |||||| |||| ||||||||||||||||||||||||||||| ||||    
T  36363037 gtgtttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaagt 36363136  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaac 339  Q
    || |||||||| |||||  ||  ||||||||| ||||||| ||||| | ||||| | |||| ||||||||||||||||||||||||||| |||||    
T  36363137 gtcattgaagttttatatcattgtttatcatgctaatatgttaactttctaaaagacattttatagtatccgtaatttaaaaatgaaaagtgaac 36363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 332
Target Start/End: Original strand, 9856919 - 9857072
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |||||    
T  9856919 gggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattatatgatcgtttattatgtt 9857018  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    |||||| ||||| ||||||||| |||||||||| ||||||| ||||||||||||    
T  9857019 aatatgttaactttttaaaaaacatttcatagtgtccgtaacttaaaaatgaaa 9857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 145 - 367
Target Start/End: Complemental strand, 36392388 - 36392167
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    ||||||||||||| |||||||||||||||  ||  || | |||||  |||| ||||||||||||||||||||||| || |||| |||||||| |||||||    
T  36392388 gtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattacggactatataatatatttt-ctaaaatagattaagt 36392290  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctcc 344  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||| |||| |||| |||||||||| || |||||||||||||||||| | |||| ||     
T  36392289 gtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtctgtaatttaaaaatgaaaagtaaaccttca 36392190  T
Q  345 ctcctaaaccgtccatccaaaca 367  Q
    |||||   || ||||||||||||    
T  36392189 ctcctttcccctccatccaaaca 36392167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 311
Target Start/End: Original strand, 11756882 - 11757048
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| ||||||||||||||  ||| ||||| ||||  ||||  ||||||||||||| |||||||||||||||| ||||||||||||||||    
T  11756882 tgtgtttggattgagggtttaggaggggag-ggatgggagagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaag 11756980  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagt 311  Q
    ||||||| |||||||||| |||||||||| ||||||||||| || ||||| ||||||||||| |||||    
T  11756981 tgtgattaaagtattatatgatcatttatgatgttaatatgttagctcttaaaaaaatattttatagt 11757048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 144 - 345
Target Start/End: Complemental strand, 2550592 - 2550391
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||  | |||||||||||||||||||||||| ||||||||| |    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacg 2550493  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactcttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||| |||  ||||||||| || |||  ||| | ||| |||||| || ||||||| || |||||||||||||||||| | ||||||    
T  2550492 tgtgattgaagtattatatgattgtttatcatg-tattattttaattgtttaaaaaaacatatcatagtgtctgtaatttaaaaatgaaaagtaaaccct 2550394  T
Q  343 ccc 345  Q
    |||    
T  2550393 ccc 2550391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 20147111 - 20146917
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaata------ 236  Q
    ||||||||||||||| |||||||||||||||     ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||          
T  20147111 gtgtgtttggattgagggtttaggaggggaa-----gggagggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaattaa 20147018  T
Q  237 ----aattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
        ||||||||||||||||| ||||||| ||||  |||||||||||||||| ||||| ||||||||| ||||||||||  |||||||||||||||||||    
T  20147017 gtgtaattaagtgtgattgaaatattatatgatcgcttatcatgttaatatgttaactttttaaaaaacatttcatagtgaccgtaatttaaaaatgaaa 20146918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 202 - 345
Target Start/End: Complemental strand, 8503017 - 8502874
Alignment:
Q  202 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaat 301  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||  | |||||| ||||| || ||||| ||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattatgtaattgtgtatcatattaatttgttaactttttaaaaaat 8502918  T
Q  302 atttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||||| | ||||||||||||||||||||| |||||||||||    
T  8502917 atttcataatgtccgtaatttaaaaatgaaaagtgaaccctccc 8502874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 37606940 - 37607087
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||| ||||||||||||  |||||||||||||||||| |||| |||||||||||||||||    
T  37606940 gtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37607038  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     ||||| |||| |||| ||||||||||||| ||| ||||||||||||||    
T  37607039 ttaactttttataaaacatttcatagtatctgtattttaaaaatgaaaa 37607087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 16502033 - 16501841
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaaggg-agggtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaatt 240  Q
    ||||||||||||||| |||||||||||| ||  || ||| ||   ||| ||||  |||||||||||||||||||||| ||| ||||| |||||||||||     
T  16502033 gtgtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacggactatatatcatattttttctaaaataaatc 16501934  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||| ||||| || |||||| |||||||| | |||||||||||||||||||||    
T  16501933 aagtgtgattaaagttttatatgatcatttattatgttaatatgttaacttttaaaaaaacatttcataatgtccgtaatttaaaaatgaaaa 16501841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 186 - 333
Target Start/End: Complemental strand, 9798810 - 9798663
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgc 285  Q
    |||| ||||| |||| ||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||| |||| ||| ||||||||| ||      
T  9798810 tttacttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattatatgatcgtttttcatgttaaaatat 9798711  T
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | ||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  9798710 tgactttttaaaaaacatttcgtagtatccgtaatttaaaaatgaaaa 9798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 328
Target Start/End: Original strand, 10476029 - 10476216
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaa-ttacggactatata-acatgtttttctaaaataaatt 240  Q
    ||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||| |||| || |||||| ||||||||||||||||||||||    
T  10476029 gtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaatt 10476128  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaat 328  Q
    |||||||||||||||||||||  ||| |||||||| |||||||| |   | ||| | ||||||||||||||   ||||||||||||||    
T  10476129 aagtgtgattgaagtattatataatcgtttatcatcttaatatgtttttttttttataaatatttcatagtggtcgtaatttaaaaat 10476216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 37779150 - 37779296
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| ||||||||||| ||||||| ||| |||||||| ||||||||||||  |||||||||||||||||| |||| |||||||||||||||||    
T  37779150 gtttacttttcgtttttaaattaaggactat-taa-atgtttttttaaaataaattatatgtgattgaagtattatatgatcgtttatcatgttaatatg 37779247  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     ||||| |||| |||| ||||||||||||| ||| ||||||||||||||    
T  37779248 ttaactttttataaaacatttcatagtatctgtagtttaaaaatgaaaa 37779296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 305
Target Start/End: Original strand, 42681451 - 42681618
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcattttta-----aattacggactatataacatgtttttctaaaataa 237  Q
    ||||||||||||||| |||||| |||||||| ||| |||||| |||| ||||  |||||      |||||||||||||||||||||||||||||||||||    
T  42681451 gtgtgtttggattgagggtttaagaggggaaaggaggggaggatttactttttttttttttttttaattacggactatataacatgtttttctaaaataa 42681550  T
Q  238 attaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatattt 305  Q
     || ||||||||| |||||||||| ||||||||||||||||| |||  ||| | ||||||||||||||    
T  42681551 ttttagtgtgattaaagtattatatgatcatttatcatgttattattttaattttttaaaaaatattt 42681618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 142 - 283
Target Start/End: Original strand, 14681472 - 14681612
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    |||||||||||||||| ||||||||||||||| ||||| || |||| ||||||| |||||||||||| || |||||||||||||||| ||||||||||||    
T  14681472 tgtgtgtttggattgagggtttaggaggggaa-ggaagtgatggttaaattttcttttttaaattacagattatataacatgtttttttaaaataaatta 14681570  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    | ||||||||||| | |||| ||   ||||||||||||||||    
T  14681571 aatgtgattgaaggaatatatgactgtttatcatgttaatat 14681612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 265
Target Start/End: Original strand, 22022850 - 22022975
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggttta---attttcatttttaaattacggactatataacatgtttttctaaaataaat 239  Q
    ||||||||||||||| ||||||||||||||||||| | |||| ||||    ||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  22022850 gtgtgtttggattgagggtttaggaggggaatggaggagaggatttagttttttttttttttaaattacggactatataacatatttttctaaaataaat 22022949  T
Q  240 taagtgtgattgaagtattataggat 265  Q
    ||||||||||||||  ||||||||||    
T  22022950 taagtgtgattgaaagattataggat 22022975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 17024393 - 17024275
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatc 314  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||| ||| ||||||||||||| ||||| |||||| || |||||||| | ||    
T  17024393 tataacatgtttttctaaaataaattaagtacgattgaagtattatatgatcgtttttcatgttaatatgataactttttaaagaacatttcataatgtc 17024294  T
Q  315 cgtaatttaaaaatgaaaa 333  Q
     | ||||||||||||||||    
T  17024293 tgcaatttaaaaatgaaaa 17024275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 40815300 - 40815417
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||||||||||||| ||||| |||| |||| ||||| |||||||||||| ||||||||||||||||||| |||||||||  ||    
T  40815300 gtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaattacagactatataacatgtttttataaaataaa-aaa 40815398  T
Q  243 gtgtgattgaagtattata 261  Q
    ||||||||||| |||||||    
T  40815399 gtgtgattgaaatattata 40815417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 37551453 - 37551598
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  37551453 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37551551  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     ||||| |||| |||| |||||  ||| || ||| ||||||||||||||    
T  37551552 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaa 37551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 185 - 333
Target Start/End: Original strand, 37654283 - 37654428
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| ||||||||||| ||||||||||| | ||||||  ||||||||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  37654283 gtttacttttcgtttttaaattatggactatataaaa-gttttttaaaaataaattatgtgtgattgaagtattatatgatcgtttatcatgttaatatg 37654381  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     ||||| |||| |||| |||||  ||| || ||| ||||||||||||||    
T  37654382 ttaactttttataaaacatttc--agtgtctgtagtttaaaaatgaaaa 37654428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 34980813 - 34980948
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| || |||||| | |||| |||||||||||||| || |  ||| || ||||| |||||||||||||    
T  34980813 gtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaattacgaacaacgtaaaatatttttttaaaataaattaa 34980912  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||||||  |||||||||||||||    
T  34980913 gtgtttttgaagtattatataatcatttatcatgtt 34980948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 20513678 - 20513496
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| | |||  ||||| ||| |||| ||||| |||||||||||||            ||||||| |||||||||||||    
T  20513678 gtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaattacg------------tgtttttataaaataaattaa 20513591  T
Q  243 gtgtgattgaagtattatag----gatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||||||     |||| ||||||||| ||||||| ||||| ||||||||| |||||||||| || ||| ||||||||||||||    
T  20513590 gtgtgattgaagtattatatatatgatcgtttatcatgataatatgttaactttttaaaaaacatttcatagtgtctgtagtttaaaaatgaaaa 20513496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 1658054 - 1657969
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  1658054 gtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgttttt 1657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 147 - 327
Target Start/End: Original strand, 10650434 - 10650601
Alignment:
Q  147 gtttggattgatggtttaggaggggaat--ggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    |||||||| || | |||||||||||||   ||| |||||| |||| |||| |||||||||||||||||  ||| | ||||||||||||||||||||||||    
T  10650434 gtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaatgtttttctaaaataaattaagt 10650533  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    |||||||||||||               |||| ||||||| ||||| |||| |||| ||||||||||||||||||||||||||    
T  10650534 gtgattgaagtat---------------catggtaatatgttaactttttataaaacatttcatagtatccgtaatttaaaaa 10650601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 367
Target Start/End: Original strand, 22023483 - 22023597
Alignment:
Q  256 attataggatcatttatcatgttaatatgctaac-tctttaaaaaatatttcat-agtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaa 352  Q
    |||||| |||| ||||||||||||||||| |||| | ||||||||| ||||||| | ||||||||||||| ||||||||| | |||||| ||||||||||    
T  22023483 attatatgatcgtttatcatgttaatatgttaacttttttaaaaaacatttcataaatatccgtaatttataaatgaaaagtaaaccctcccctcctaaa 22023582  T
Q  353 ccgtccatccaaaca 367  Q
    || ||||||||||||    
T  22023583 ccctccatccaaaca 22023597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 272
Target Start/End: Original strand, 10204579 - 10204708
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||| || ||||||||||||||| ||| | ||||| | | ||||  ||||||||||||  || || ||| |||| ||| |||||||||||||    
T  10204579 gtgtgtttggatcgagggtttaggaggggaagggaggtgagggctcacttttattttttaaattaccaacaatgtaaaatgtctttttaaaataaattaa 10204678  T
Q  243 gtgtgattgaagtattataggatcatttat 272  Q
    ||||  ||||||||||||| ||||||||||    
T  10204679 gtgtttttgaagtattatatgatcatttat 10204708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 14245287 - 14245218
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||  ||||||||||||||||||||||    
T  14245287 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggac 14245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 367
Target Start/End: Complemental strand, 29002359 - 29002222
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatga 330  Q
    |||||||||||| | |||||| ||||||||| |||| ||||||||||||||||| |   | |  |||||| |||| ||||| | | ||||||||||||||    
T  29002359 aaaataaattaaatatgattgtagtattatatgatcgtttatcatgttaatatgttgtttttaaaaaaaacattttatagtgttcataatttaaaaatga 29002260  T
Q  331 aaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    ||| | |||||| |||||||||||| ||||||||||||    
T  29002259 aaagtaaaccctcccctcctaaaccctccatccaaaca 29002222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 270
Target Start/End: Complemental strand, 15986865 - 15986738
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaag-ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||| | | ||||  ||||||||||||| || || ||| |||| ||| ||||||||||||    
T  15986865 gtgtgtttggattgagggtttaggaggggaa-ggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaatta 15986767  T
Q  242 agtgtgattgaagtattataggatcattt 270  Q
    |||||  || |||||||||| ||||||||    
T  15986766 agtgtttttaaagtattatatgatcattt 15986738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 13634952 - 13634886
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  13634952 gtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacg 13634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 8502838 - 8502907
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| ||||||||| || ||||||||| ||||||||| | ||||||||||||||||||||||    
T  8502838 gtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggac 8502907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 14245091 - 14245160
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| |||| ||||| ||||||||||||||||    
T  14245091 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggac 14245160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 33744434 - 33744299
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||||||||| ||||||||||  ||| ||| ||||||| | | ||||   |||||||||||| || ||  || |||||||| |||||||||||||    
T  33744434 gtgtatttggattgagggtttaggagatgaagggaggggagggctcacttttatattttaaattacgaacaattcaaaatgtttttttaaaataaattaa 33744335  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||| | |||| ||||||||||||||||    
T  33744334 gtgtttttgaagaaatatatgatcatttatcatgtt 33744299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 142 - 212
Target Start/End: Complemental strand, 11757145 - 11757075
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||| || |||||| |||||||| ||| |||||||||||  |||||||||||||||||||||    
T  11757145 tgtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggac 11757075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 14684725 - 14684588
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttcta--aaataaatt 240  Q
    ||||||||||||| | ||||||||||||| |  ||  |||||| ||| ||||| ||||| |||||||| | |||||| |||||||| |   |||||||||    
T  14684725 gtgtgtttggatttagggtttaggaggggcagagagaggagggcttacttttctttttttaattacgggcaatataaaatgttttttttttaaataaatt 14684626  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| |||||||   | ||||||||||||    
T  14684625 aagtgtgattgaaatattatatacttatttatcatgtt 14684588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 7544377 - 7544308
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| | | ||||||||||  ||||||||||||||||||||||    
T  7544377 gtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggac 7544308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 11419360 - 11419303
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  11419360 gtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaattaa 11419303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 16938720 - 16938655
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || |||||||||| |||||||| |||||||||||  |||||||||||||||||    
T  16938720 gtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattac 16938655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 333
Target Start/End: Original strand, 27110120 - 27110220
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaa 331  Q
    ||||||||||||||||||| || ||||||| |||||||||| || ||||| |  ||| | ||| |||||||||| ||||||| ||||||||||||| |||    
T  27110120 aaataaattaagtgtgattaaaatattatatgatcatttattatattaatgttttaaat-ttttaaaaatattttatagtattcgtaatttaaaaaagaa 27110218  T
Q  332 aa 333  Q
    ||    
T  27110219 aa 27110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 43497 - 43601
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattatagg-atcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaa-tttaaaaat 328  Q
    |||| ||||||||| ||| |||||||||| | | ||| ||||| ||||||||||| ||||| || ||||||||||||||||| | ||||| |||||||||    
T  43497 aaaaaaaattaagtatgactgaagtattacatgtatcttttattatgttaatatgttaacttttcaaaaaatatttcatagtgttcgtaattttaaaaat 43596  T
Q  329 gaaaa 333  Q
    |||||    
T  43597 gaaaa 43601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 40305906 - 40305774
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||| ||| ||| |||||   | | ||||  |||||||||||||  | || ||| ||||||||  ||||||||||||    
T  40305906 gtgtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacgaccaatgtaaaatgttttttcaaaataaattaa 40305807  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    | ||  |||||||| |||| |||||||||||||    
T  40305806 gggtttttgaagtactatatgatcatttatcat 40305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 8551659 - 8551524
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||  || ||| ||  | | ||||  |||||||||||||  | || ||| |||| |||  ||||||||||||    
T  8551659 gtgtgtttggattgaaggtttaggaggggaagagagggggggtctcacttttattttttaaattacgagcaatgtaaaatgtgttttaaaaataaattaa 8551560  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  || |||||||||| |||||||||| |||||    
T  8551559 gtgtttttaaagtattatatgatcatttataatgtt 8551524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 39966150 - 39966075
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattata 261  Q
    |||| |||| |||||||||||||||| |||||||||| ||||| | |||||||||||  ||||||||| |||||||    
T  39966150 tttattttttatttttaaattacggattatataacatattttttttaaataaattaaacgtgattgaattattata 39966075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 33424973 - 33424911
Alignment:
Q  213 tatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||| |||||||| ||||||||||||| | ||||| |||||||||| |||||||||||||    
T  33424973 tatataaaatgtttttataaaataaattaaatctgattaaagtattatatgatcatttatcat 33424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 11436944 - 11437017
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatata 218  Q
    ||||||||||||| ||||||||||||||| |||  |||||| ||| ||| | |||||||||||||||| |||||    
T  11436944 gtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatata 11437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 14245204 - 14245139
Alignment:
Q  268 tttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||| ||||| | ||||||| |||||| ||| ||||||||||||||| |||||    
T  14245204 tttatcatgttaatatgttaactttctaaaaaacatttcacagtgtccgtaatttaaaaaagaaaa 14245139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 32727918 - 32727833
Alignment:
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaat 328  Q
    ||||| ||||| ||||| | |||| ||||||||||||||||| |   | |||||||||||||||||| || |||||||||||||||    
T  32727918 gtgtggttgaattattacatgatcgtttatcatgttaatatgttcgttttttaaaaaatatttcataatacccgtaatttaaaaat 32727833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 278
Target Start/End: Original strand, 13298317 - 13298402
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||||| ||||| |||||| | ||||||  || ||||||||||||||||| |||||||||  ||| ||||||||||||    
T  13298317 ttttcttttttaaattgcggacaatataaaacgtttttgcaatataaattaagtgtgatttaagtattat--gattatttatcatgtt 13298402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 1657959 - 1658018
Alignment:
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||| ||||||||| |||| ||||| ||||||||||||||||||||| | |||||||||    
T  1657959 taactttttaaaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctccc 1658018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 2556224 - 2556122
Alignment:
Q  176 gaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    |||| ||| ||||| ||||||||||||||||| |||  |||||| || ||||| |||||||| || ||||||| |  ||| ||||| |||||||||||||    
T  2556224 gaagagagagtttacttttcatttttaaattatggatgatataaaatattttt-taaaataagttgagtgtgactagagttttatatgatcatttatcat 2556126  T
Q  276 gtta 279  Q
    ||||    
T  2556125 gtta 2556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 4423233 - 4423316
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttt 226  Q
    ||||||||||||||| ||||||||||   || ||| || || |||| |||||| ||||||||||||  ||||||||||||||||    
T  4423233 gtgtgtttggattgaaggtttaggagaaaaaaggatggaagtgtttgattttcttttttaaattaccaactatataacatgttt 4423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 5688452 - 5688551
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||| | ||||  ||||||||||||| || || ||| |||||||| ||||||| |||||||||  |||||||||||||  |||||  ||||||||    
T  5688452 gggagggttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaatagattaagtgtttttgaagtattatatcatcatcaatcatgtt 5688551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 10043255 - 10043390
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| ||| ||||||||||||| |||||||| ||| |||| |  | | ||||  ||||||||||||| || || ||| || || || ||||| |||||||    
T  10043255 gtgtatttagattgatggtttatgaggggaagggaggggatgactcacttttattttttaaattacgaacaatgtaaaatattgttttaaaagaaattaa 10043354  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||||||| ||| |||||| |||||    
T  10043355 gtgtttttgaagtattatatgattatttataatgtt 10043390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 21580950 - 21581085
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||||||||  ||||| |||| | || ||| ||||||| | | ||||  ||| ||||||||| || || ||| || ||||| |||||||||||||    
T  21580950 gtgtatttggattgggggttttggagagaaagggaggggaggggtcacttttattttctaaattacgaacaatgtaaaatatttttttaaaataaattaa 21581049  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||| ||| || |||||||||||||    
T  21581050 gtgtttttgaagtatcatatgaacatttatcatgtt 21581085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 333
Target Start/End: Original strand, 4423338 - 4423404
Alignment:
Q  267 atttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||| | ||||||||||||| | || ||||||||||||||| | | |||||||||||||||||||    
T  4423338 atttattacgttaatatgctaaattttaaaaaaatatttcataatgttcgtaatttaaaaatgaaaa 4423404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 10476269 - 10476203
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    |||||||||||| || ||||||||||||||| ||| ||||| ||||| || | ||||||||||||||    
T  10476269 gtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacg 10476203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 36363271 - 36363205
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    |||||||||| || ||||||||||||||| ||| | ||| ||| | |||||||||||||||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacgga 36363205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 5688631 - 5688590
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagg 184  Q
    ||||||||||||||| ||||||||||||||| ||||||||||    
T  5688631 gtgtgtttggattgagggtttaggaggggaagggaagggagg 5688590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 18855698 - 18855745
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||| ||||| |||||||||| ||||||||||||||||    
T  18855698 aaaatgaattaagtttgatttaagtattatatgatcatttatcatgtt 18855745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 9798613 - 9798683
Alignment:
Q  141 ttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    |||||||||||||| || | |||||||||  || ||| | ||| ||||| |||||||||||||||||||||    
T  9798613 ttgtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacgga 9798683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 345
Target Start/End: Original strand, 14245202 - 14245251
Alignment:
Q  296 aaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||| |||||| ||| ||||||||||||||||||||||  |||||||||    
T  14245202 aaaaacatttcacagtgtccgtaatttaaaaatgaaaaacaaaccctccc 14245251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 15986627 - 15986692
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||  || ||||||||||||||| ||| ||||||  ||||||||| ||||||| ||||    
T  15986627 gtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttac 15986692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 33744196 - 33744265
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||| ||| || ||| ||| ||||||||||| ||||| ||||||||||| ||||    
T  33744196 gtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggac 33744265  T

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Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 43433 - 43481
Alignment:
Q  197 tttttaaattacggactatataacatg-tttttctaaaataaattaagt 244  Q
    ||||||||||| ||| ||||||||||| ||||| |||||||||||||||    
T  43433 tttttaaattagggattatataacatgttttttttaaaataaattaagt 43481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 1977622 - 1977670
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||||| || |||||||||||||||| |||| |||||||||||    
T  1977622 taaaatcaattaggtttgattgaagtattatatgatcctttatcatgtt 1977670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 10043163 - 10043115
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||||||||||  || |||||||||| ||||||||||||||||    
T  10043163 taaaattaattaagtgtttttaaagtattatatgatcatttatcatgtt 10043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 12035939 - 12036003
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    |||||||||||| |||||||||||||||||| |||  |||||  ||  ||||| |||||||||||    
T  12035939 gtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaatta 12036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 31543313 - 31543111
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| ||||||||||||||| ||| ||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||||||    
T  31543313 gtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaa 31543214  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| || | ||||| ||||||||||| ||||| ||| ||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  31543213 gtgtgattgaagtattatatgaccgtttatgatgttaatatgttaacttttttaaaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccct 31543114  T
Q  343 ccc 345  Q
    |||    
T  31543113 ccc 31543111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 1027089 - 1026865
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||| | ||||||||| ||||| ||| || |||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1027089 gtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaa 1026991  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    || |||||||||||||||| |||| ||||||||||||||||| ||||| || | ||||||||||||||| |||| |||||||||||||||| | ||||||    
T  1026990 gtatgattgaagtattatatgatcgtttatcatgttaatatgttaacttttgataaaatatttcatagtgtccgcaatttaaaaatgaaaagtaaaccct 1026891  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||||||||| ||||||||||||    
T  1026890 cccctcctaaaccctccatccaaaca 1026865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 144 - 348
Target Start/End: Complemental strand, 11575646 - 11575442
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||| | ||||||||| | ||| ||| ||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaattaag 11575547  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    ||||||| |||||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||||| |||||||| | |||||||    
T  11575546 tgtgattaaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtatccttaatttaagaatgaaaagtaaaccctc 11575447  T
Q  344 cctcc 348  Q
    |||||    
T  11575446 cctcc 11575442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 9718720 - 9718495
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||  ||||| ||||| ||||||||||| | |||||||||||| ||||||||||||  |||||    
T  9718720 gtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcattaa 9718621  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
     |||||||||||||||||| |||  ||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||  |||||||    
T  9718620 ttgtgattgaagtattatatgattgtttatcatgttaatatgctaactttttaaaaaccatttcatagtgtccgtaatttaaaaatgaaaatcgaaccct 9718521  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||||||||| ||||||||||||    
T  9718520 cccctcctaaaccctccatccaaaca 9718495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 146 - 333
Target Start/End: Original strand, 1281149 - 1281336
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    |||||||||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtg 1281248  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    || |||||||||||||  ||| ||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  1281249 tggttgaagtattatattatcgtttattatgttaatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaa 1281336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 37923320 - 37923129
Alignment:
Q  143 gtgtgtttggattgatggtttaggag-gggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||| | |||||||||| ||||| ||| || |||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaattacagactatataacatgtttttctaaaataaatta 37923221  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||| |||| || ||||||| |||||||||||||||||||||  ||||||||||||||| |||||||||| | | |||||||||||||||||    
T  37923220 agtgcgattaaaatattatatgatcatttatcatgttaatattttaactctttaaaaaacatttcatagtgttcataatttaaaaatgaaaa 37923129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 144 - 367
Target Start/End: Complemental strand, 29358581 - 29358356
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaag-ggagggtttaatttt-catttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||  ||||| |||||||| ||||| |||| ||||| |||| |||||||||| |||||| |||||||||| |||||||| |||||||||    
T  29358581 tgtgtttggattgagagtttacgaggggaaaggaagaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaataaatta 29358482  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| ||| | |||||||||||||| ||||| |||||||||||||||| |||| | ||||     
T  29358481 agtgtgattgaagtattataggatcgtttataatgttaatatgttaa-tttttaaaaaatattttatagtgtccgtaatttaaaaataaaaagtaaacct 29358383  T
Q  342 tc-cctcctaaaccgtccatccaaaca 367  Q
    || ||||||||||| ||||||||||||    
T  29358382 tctcctcctaaaccctccatccaaaca 29358356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 159 - 345
Target Start/End: Original strand, 31738442 - 31738628
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtatt 258  Q
    |||||||||||||||  |||||||| ||||  ||||  |||||||||||| ||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  31738442 ggtttaggaggggaagagaagggagagttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtatt 31738541  T
Q  259 ataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||  | |||||||||    
T  31738542 atatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagtgtccgtaatttaaaaatgaaatttaaaccctccc 31738628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 30479958 - 30479756
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| ||| ||||||||  |||||||||| ||||| |||||||| ||| ||||||||  |||||||||||||||||||| ||    
T  30479958 gtgtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatcaa 30479859  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||||  |||||||||||  |||||||| ||||| ||||||| | |||||||||| || |||||||||||||||||| ||||| ||    
T  30479858 gtgtgattgaagtattatattatcatttatcaccttaatatgttaactttttaaaagacatttcatagtgtctgtaatttaaaaatgaaaagtgaactct 30479759  T
Q  343 ccc 345  Q
    |||    
T  30479758 ccc 30479756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 7503195 - 7502970
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||| ||||||||  ||| ||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7503195 gtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaa 7503096  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||| |||||||||| |||  ||||||||||||||||| ||||| |||| |||| |||||||||| |  |||||||||||||| |||   ||||||    
T  7503095 gtgtgattaaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttcatagttttggtaatttaaaaatggaaagcaaaccct 7502996  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||| ||||| || |||||||||    
T  7502995 cccctcccaaaccctcaatccaaaca 7502970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 2248455 - 2248657
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||||||| ||| ||||| ||| ||||| | ||||||||||||||  ||||||||||||||||||||||||||| ||    
T  2248455 gtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaatcaa 2248554  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||| | ||||||| || | ||||  ||||||||| | ||||| || ||||||||||||||||| |||||||||||||||| |||| ||||||||    
T  2248555 gtgtgattggaatattatatgaccgtttacgatgttaataagttaacttttaaaaaaatatttcatagtgtccgtaatttaaaaataaaaagtgaaccct 2248654  T
Q  343 ccc 345  Q
    |||    
T  2248655 ccc 2248657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 179 - 343
Target Start/End: Original strand, 16652988 - 16653152
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||  ||||    
T  16652988 gggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattatatgatcgtttattttgtt 16653087  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    |||||| ||||| ||| ||||| |||||||| | ||||||||||||||||||||| | |||||||    
T  16653088 aatatgttaactttttcaaaaacatttcataatgtccgtaatttaaaaatgaaaattaaaccctc 16653152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 143 - 332
Target Start/End: Original strand, 28083745 - 28083934
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||| ||||||| ||||||||||||||| ||| | |||  |||  ||||| |||||||||||| ||| ||||||||||||| |||||||||||||||    
T  28083745 gtgtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaattaa 28083844  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    ||||||||| ||||||||| |||  ||||||||||| | ||| ||||||||||||||| || ||||||||||||||||||||||| ||||    
T  28083845 gtgtgattggagtattatatgattgtttatcatgttgacatgttaactctttaaaaaacatatcatagtatccgtaatttaaaaaagaaa 28083934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 179 - 346
Target Start/End: Original strand, 11785565 - 11785732
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| ||||| ||||| ||||||||||| | |||||||||||||||||||||||||| ||||| || ||||||||||||||| | |  |||||||||||    
T  11785565 gggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattatatgtttgtttatcatgtt 11785664  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccct 346  Q
    |||||||||||| |||||||||||||||||| | |||||||||||||||||||||   ||||||||||    
T  11785665 aatatgctaactttttaaaaaatatttcataatgtccgtaatttaaaaatgaaaatcaaaccctccct 11785732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 143 - 334
Target Start/End: Original strand, 6315069 - 6315256
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcattttta--aattacggactatataacatgtttttctaaaataaatt 240  Q
    ||||||||||||||| ||||||||||| ||| |  |||||||    ||||| |||||||   ||||||||||||||||||||||||||||||||||||||    
T  6315069 gtgtgtttggattgagggtttaggaggcgaagg--agggagg----aatttacattttttttaattacggactatataacatgtttttctaaaataaatt 6315162  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaa 334  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||| ||| | ||| ||||| |||||||||| |||||| |||||||||||||||    
T  6315163 aagtgtgattgaagtattatacgatcgtttatcaagttaatatgttaatttttttaaaaacatttcatagtgtccgtattttaaaaatgaaaaa 6315256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 144 - 333
Target Start/End: Original strand, 7979144 - 7979333
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| ||||||| || |||| |||  |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  7979144 tgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaag 7979243  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||  |||||||||||||| ||| |||||||||||||||| | |||   ||||| ||| ||||||  || |||||||||||||||||||||    
T  7979244 tgcaattgaagtattatatgattatttatcatgttaataagttaaacttttaataaacatttcacggtgtccgtaatttaaaaatgaaaa 7979333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 40990424 - 40990220
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||| ||||| |||| ||| | ||| ||||  ||||| |||||||||||||||||||||||||||||| | |||||||||||||    
T  40990424 gtgtgtttggattgagggtt-aggagaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaa 40990326  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaa--aaaatatttcatagtatccgt-aatttaaaaatgaaaaatgaac 339  Q
    || |||||||||||||||| ||||  |||||||||||||||| |||||||||||  |||| |||||||||| ||  | |||| |||||||||| || |||    
T  40990325 gtctgattgaagtattatatgatcgcttatcatgttaatatgttaactctttaaaaaaaacatttcatagtgtctataaattaaaaaatgaaatataaac 40990226  T
Q  340 cctccc 345  Q
    ||||||    
T  40990225 cctccc 40990220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 11033422 - 11033611
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||| || |||| ||| |||  |||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||||     
T  11033422 gtgtgtttggattgagggtttagaagaggaagggagggg--ggtttacttttcttttttaaataacggactatatatcatgtttttctaaaataaattat 11033519  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttt-aaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||  |||||| |||| ||||||||||||||||| ||| | ||| |||||| |||||||| ||| | |||||||||| ||||||    
T  11033520 gtgtgattgaataattatatgatcgtttatcatgttaatatgttaattttttaaaaaaacatttcataatattcataatttaaaattgaaaa 11033611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 37032417 - 37032561
Alignment:
Q  178 agggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgt 277  Q
    |||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||  |||||||| |    
T  37032417 agggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattatatgatagtttatcatct 37032516  T
Q  278 taatatgctaactctttaaaaaatatttcatagtatccgtaattt 322  Q
    ||||||| ||||| ||||||||| | ||| |||| ||||||||||    
T  37032517 taatatgttaactttttaaaaaacacttcctagtgtccgtaattt 37032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 30664407 - 30664556
Alignment:
Q  186 tttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgc 285  Q
    |||| ||||| |||||||||| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||  | | |||||||| ||||||||     
T  30664407 tttatttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattatataaccgtttatcatattaatatgt 30664506  T
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
    ||||| ||||||||||||||  || | |||||||||||||| ||||||||    
T  30664507 taactttttaaaaaatattttgtaatgtccgtaatttaaaactgaaaaat 30664556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 12022384 - 12022249
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| | | ||||  |||||||||||||||| || ||| |||||||| |||||||||||||    
T  12022384 gtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaattaa 12022285  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||||||| ||||||||||||||||    
T  12022284 gtgtttttgaagtattatatgatcatttatcatgtt 12022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 277
Target Start/End: Complemental strand, 42650545 - 42650443
Alignment:
Q  175 ggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    ||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  42650545 ggaagggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgattgtttatca 42650446  T
Q  275 tgt 277  Q
    |||    
T  42650445 tgt 42650443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 13404979 - 13405173
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||| ||||||||| ||||||||||||||| ||| |||||   ||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||     
T  13404979 gtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaattat 13405078  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgcta----actctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     | | |||||| ||||||| |||| ||||||||||||||| | ||    ||| || |||||||||||  || | |||||||||||||||||||||    
T  13405079 atataattgaattattatatgatcgtttatcatgttaatacgttaattcacttttaaaaaaatattttttaatgtccgtaatttaaaaatgaaaa 13405173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 41103709 - 41103611
Alignment:
Q  181 gagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||| ||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  41103709 gagggtttacttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtta 41103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 340
Target Start/End: Complemental strand, 3727078 - 3726907
Alignment:
Q  161 tttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 260  Q
    |||||||||| || ||| | ||| ||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  3727078 tttaggagggaaagggaggtgagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaattaagcatgattgaaatattat 3726979  T
Q  261 aggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaacc 340  Q
    | || | ||||||||||        ||||| ||||||||| ||| ||| || ||||||||||||||||||||||| ||||    
T  3726978 atgaccgtttatcatgt--------taactatttaaaaaacattccatggtgtccgtaatttaaaaatgaaaaataaacc 3726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 33922550 - 33922680
Alignment:
Q  170 ggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatt 269  Q
    |||| ||||||||| ||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| ||| |||||||||||| ||| |||  ||    
T  33922550 ggaagggaagggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagtatgattgaagtatgatatgattgtt 33922649  T
Q  270 tatcatgttaatatgctaactctttaaaaaa 300  Q
    ||||||| ||||||| ||||| |||||||||    
T  33922650 tatcatgataatatgttaactttttaaaaaa 33922680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 36308881 - 36309048
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttc-taaaataaattaagtgtgattgaagtattataggatcatttatcatgt 277  Q
    ||||||||| | ||||| || ||||| ||  |||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||  ||||||||||    
T  36308881 gggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattatatgattgtttatcatgt 36308980  T
Q  278 taatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||||| | ||| || |||| |||||||| | | | ||||||||||| ||||||| | |||||||||    
T  36308981 taatatgtttacttttaaaaatatatttcacaatgtacgtaatttaaagatgaaaagtaaaccctccc 36309048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 4247761 - 4247569
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaag----ggagggtttaattttcattttt-aaattacggactatataacatgtttttctaaaataa 237  Q
    ||||||||||||||| ||||||||||||||| ||| |    |||||||||| ||||| ||||| |||||| | | |||   | |||||||| ||||||||    
T  4247761 gtgtgtttggattgaaggtttaggaggggaagggaggtagaggagggtttacttttctttttttaaattatgaattatt--atatgtttttttaaaataa 4247664  T
Q  238 attaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||| ||||| |||||||||| |||| ||||||||| ||||||| |||||  ||||||||||||| | |||  ||||||||||||||| ||||    
T  4247663 attaagtatgatttaagtattatatgatcgtttatcatgctaatatgttaacttcttaaaaaatattttaaagt-gccgtaatttaaaaataaaaa 4247569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 10028114 - 10028241
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    ||||||||||| || ||||||||||||||  ||| | |||  |||| ||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  10028114 tgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaag 10028213  T
Q  244 tgtgattgaagtattataggatcattta 271  Q
    |||| ||||||| ||||| |||| ||||    
T  10028214 tgtggttgaagtcttatatgatcgttta 10028241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 333
Target Start/End: Complemental strand, 29691118 - 29690973
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttcta---aaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgcta 287  Q
    ||||| || |||||||||||||||| |||||||||||| |    |||| | ||||||||||||||||||| ||| |||| ||||||||||||||||| ||    
T  29691118 ttttctttattaaattacggactatttaacatgtttttttttttaaatgacttaagtgtgattgaagtatcatatgatcgtttatcatgttaatatgtta 29691019  T
Q  288 actctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||| ||| ||||||||||| ||||||| |||  ||| |||||||||    
T  29691018 acttttttaaaaatatttcctagtatcagtatgttataaatgaaaa 29690973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 279
Target Start/End: Complemental strand, 24243289 - 24243152
Alignment:
Q  141 ttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatt 240  Q
    |||||||||||||| || |||||| | |||||||||| ||||||| ||| ||| | ||| |||||||| ||| |||| | || ||||| | |||| ||||    
T  24243289 ttgtgtgtttggatcgagggtttaag-ggggaatggaggggagggcttactttccttttctaaattacagacaatatgagatctttttttcaaattaatt 24243191  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  24243190 aagtgtgattgaagtattatatgatcatttatcatgtta 24243152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 16024156 - 16024292
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaatta 241  Q
    ||||||||||||||| ||||||||| ||||| ||| ||||| | | | ||||  ||||||||||||| || |||||| ||| ||||| | ||||||||||    
T  16024156 gtgtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaatta 16024255  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||  ||||||||||||| ||||||||||||||||    
T  16024256 agtgtttttgaagtattatatgatcatttatcatgtt 16024292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 30365133 - 30365268
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||| ||| ||| ||||| ||| | |||| |||||||||||||| || | |||| || ||||| || ||||||||||    
T  30365133 gtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacgaacaacataaaatatttttttagaataaattaa 30365232  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||| |||||  |||||||||||||||    
T  30365233 gtgtttttgaagtgttatataatcatttatcatgtt 30365268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 8815382 - 8815247
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatt-a 241  Q
    ||||||||||||||| ||||||||||||| | ||| ||||||||| | |||| |||||||||||||| ||  | ||| |||||||| | ||||||||| |    
T  8815382 gtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgttttt-tcaaataaattaa 8815284  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||  |||||||||||||  |||||||||||||||    
T  8815283 agtgtttttgaagtattatataatcatttatcatgtt 8815247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 43826335 - 43826470
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| | ||||||||||||||||| ||||| ||| | ||||  ||| ||||||||| || || ||| ||||||||  ||||||| ||||    
T  43826335 gtgtgtttagattgaggatttaggaggggaatggaggggagagttcatttttattttgtaaattacgaacaatgtaaaatgttttttcaaaataagttaa 43826434  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||||||||| || ||||||||||||||||    
T  43826435 gtgtttttgaagtattttatgatcatttatcatgtt 43826470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 343
Target Start/End: Original strand, 34634277 - 34634346
Alignment:
Q  274 atgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    ||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  34634277 atgttaatatgttaactttttaaaagatatttcatagtgtccgtaatttaaaaataaaaaatgaaccctc 34634346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 38198258 - 38198155
Alignment:
Q  174 tggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatc 273  Q
    |||| ||||||  ||| |||||||||||||||||| |||  |||||  ||||||| |||||| ||||||||||||||||||||||||| |||||| ||||    
T  38198258 tggatgggaggacttacttttcatttttaaattacagacactataaagtgttttt-taaaatgaattaagtgtgattgaagtattatatgatcatatatc 38198160  T
Q  274 atgtt 278  Q
    |||||    
T  38198159 atgtt 38198155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 278
Target Start/End: Original strand, 27487053 - 27487128
Alignment:
Q  203 aattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||  ||||| ||||||||||||||  |||||||||| |||||||||||||| ||||||||||||||||    
T  27487053 aattacggacgttataaaatgtttttctaaaaccaattaagtgttattgaagtattatatgatcatttatcatgtt 27487128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 278
Target Start/End: Complemental strand, 30582033 - 30581916
Alignment:
Q  164 aggaggggaatggaagggagggtttaattttcatttttaaattacggac------tatataacatgtttttctaaaataaattaagtgtgattgaagtat 257  Q
    |||||||||| ||| ||||||| ||| ||||| ||||||||||||||||      |||||||  ||||||   |||| ||||||||||||||||||||||    
T  30582033 aggaggggaagggaggggagggcttacttttcttttttaaattacggacggacactatataatgtgtttt---aaaacaaattaagtgtgattgaagtat 30581937  T
Q  258 tataggatcatttatcatgtt 278  Q
    |||| ||||||||||||||||    
T  30581936 tatatgatcatttatcatgtt 30581916  T

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Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 3726866 - 3726935
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  3726866 gtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggac 3726935  T

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Target: chr8; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 11785767 - 11785698
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||| ||  ||||||||||||| |||||||||||||||||||||||    
T  11785767 gtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggac 11785698  T

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Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 16653190 - 16653121
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||  |||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggac 16653121  T

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Target: chr8; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 43732928 - 43732859
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||    
T  43732928 gtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 43732859  T

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Target: chr8; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 40633229 - 40633095
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||| ||| ||||| ||||| |  |||| |||||| |||||| ||||||| || |  ||| ||||| || |||||||||||||    
T  40633229 gtgtgtttggattgagggtttcggaagggaa-ggaagcggaggttcaattttaatttttcaattacgaacaacgtaaaatgttgttttaaaataaattaa 40633131  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||| |||||||  |||||||||||||||    
T  40633130 gtgtttttgaaatattatacaatcatttatcatgtt 40633095  T

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Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 278
Target Start/End: Original strand, 26167769 - 26167894
Alignment:
Q  152 gattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattg 251  Q
    |||||| ||||||  ||||||||||| | || |  ||||||||| ||||||||||||||||  || || ||  |||| |||||||||| ||| || ||||    
T  26167769 gattgaaggtttataaggggaatggaggagatgacttaattttcttttttaaattacggacagtaaaaaataatttt-taaaataaataaagagttattg 26167867  T
Q  252 aagtattataggatcatttatcatgtt 278  Q
    |||||||||| ||||||||||||||||    
T  26167868 aagtattatatgatcatttatcatgtt 26167894  T

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Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 31543078 - 31543143
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||| || |||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  31543078 tgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacgga 31543143  T

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Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 31738664 - 31738595
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||||||   | |||||||||||| |||||||||||||||||||||    
T  31738664 gtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggac 31738595  T

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Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 20472933 - 20472801
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||| |||| || |||||| |||  | | ||||  ||||||||||||| || || |||  |||||||  ||||||||| ||    
T  20472933 gtgtgtttggattgaaggtttagaagggaaagggaaggaaggactcacttttattttttaaattacgaacaatgtaagttgttttttaaaaataaatcaa 20472834  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| |||||| ||||||    
T  20472833 gtgtttttgaagtattatatgatcatatatcat 20472801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 311
Target Start/End: Complemental strand, 35694915 - 35694828
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat-gttaatatgctaactctttaaaaaatatttcatagt 311  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||  |||| ||  |||||||| ||||| ||||||||||||||||||||    
T  35694915 tttttttaaaataaatcaagtgtgattgaagtattatatgatc-gttattatatttaatatgttaactttttaaaaaatatttcatagt 35694828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 36309081 - 36309018
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    ||||||||| || ||||||||||||||| ||| ||||||||||| ||||||| |||||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacg 36309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 9933243 - 9933379
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttct-aaaataaatta 241  Q
    ||||||||||||||| ||||||||||| ||| ||| || ||  || | ||||   |||||||||||| || || ||| || ||||| | |||||||||||    
T  9933243 gtgtgtttggattgaaggtttaggaggagaaaggagggaagaattcacttttatattttaaattacgaacaatgtaaaatatttttttcaaaataaatta 9933342  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||| |  ||||| ||||||| ||||||||||||||||    
T  9933343 agtatttttgaaatattatatgatcatttatcatgtt 9933379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 270
Target Start/End: Complemental strand, 8672035 - 8671908
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||||| ||||||| | | |||| |  ||||||||  ||||||||||||  |  || ||| |||| ||| |||||||||||||    
T  8672035 gtgtgtttggattgaggatttagaaggggaaggtaggggatgacttaattttattttttaaattacaaataatgtaaaatgtatttttaaaataaattaa 8671936  T
Q  243 gtgtgattgaagtattataggatcattt 270  Q
    || |  ||||||||||||| ||||||||    
T  8671935 gtatttttgaagtattatatgatcattt 8671908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 34633819 - 34633858
Alignment:
Q  222 tgtttttctaaaataaattaagtgtgattgaagtattata 261  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  34633819 tgtttttctaaaataaatcaagtgtgattgaagtattata 34633858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 43732682 - 43732822
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttct--------aaaa 234  Q
    ||||||||||||||| ||||||||||||||| |||  |||||  | | ||||  ||||||||||||  || || ||| |||||||| |        ||||    
T  43732682 gtgtgtttggattgagggtttaggaggggaagggagaggaggactcacttttattttttaaattactaacaatgtaaaatgtttttttttttaaaaaaaa 43732781  T
Q  235 taaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||||||||  ||||||||||||| |||||||||||||    
T  43732782 taaattaagtgtttttgaagtattatatgatcatttatcat 43732822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 7394701 - 7394636
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||| | ||||  |||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 16024394 - 16024326
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || | ||||||||||||| ||| ||||| ||||| ||||| ||||||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggac 16024326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 34634384 - 34634315
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| ||  |||||||||||||| ||| | ||||||| | |||| |||||||||||||||||    
T  34634384 gtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggac 34634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 41103507 - 41103568
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaa 204  Q
    |||||||||||| || |||||||||||||||  || |||||||||| |||||| ||||||||    
T  41103507 gtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaa 41103568  T

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Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 27483636 - 27483696
Alignment:
Q  216 ataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatg 276  Q
    |||| |||||||| | |||||||| |||||| |||||||||||||| ||| ||||||||||    
T  27483636 ataaaatgttttttttaaataaataaagtgttattgaagtattatatgataatttatcatg 27483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 30479721 - 30479785
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    ||||||||||| || | ||||||||||| ||||| ||||| ||| | ||||||||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattac 30479785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 37032447 - 37032396
Alignment:
Q  316 gtaatttaaaaatgaaaaatgaaccctccctcctaaaccgtccatccaaaca 367  Q
    |||||||||||| ||||||| ||| |||||||||||||| || |||||||||    
T  37032447 gtaatttaaaaaagaaaaataaactctccctcctaaaccttcaatccaaaca 37032396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 34552646 - 34552696
Alignment:
Q  225 ttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    |||| |||||| ||||||| || |||||||||||||| |||||||||||||    
T  34552646 ttttttaaaattaattaagcgtaattgaagtattatatgatcatttatcat 34552696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 10028259 - 10028328
Alignment:
Q  277 ttaatatgctaactctttaaaa-aatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||||| ||||| || |||| ||||||||||||| |||||||||||||| | |||| | |||||||||    
T  10028259 ttaatatgttaacttttaaaaaaaatatttcatagtgtccgtaatttaaaagtaaaaagtaaaccctccc 10028328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 16838152 - 16838201
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||| ||||||||||||||||| ||||||| |||||| || |||||||    
T  16838152 taaaatgaattaagtgtgattgaaatattatatgatcatataccatgtta 16838201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 39449361 - 39449442
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| || || | | |||| ||| ||| ||||||||| |||  ||||||||||||| ||||||| ||||||||    
T  39449361 tttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgtt 39449442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 5562016 - 5562102
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||||||||||||| |  |||||| ||  |||| ||||||||||| ||| |||| ||| ||||||| |||||||||||| ||||    
T  5562016 ttttcatttttaaattacgtataatataa-attattttttaaaataaatt-agtatgatagaaatattatatgatcatttatcaagtta 5562102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 6192475 - 6192392
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||||| |||||||  ||||| || |||||  |||| ||||||| || |||||||||| |||| ||||||||||||||||    
T  6192475 ttttcatttttaaaatacggacc-tataaaatattttt--aaaagaaattaa-tgcgattgaagtactatatgatcatttatcatgtt 6192392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 9434540 - 9434405
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaa-aataaatta 241  Q
    ||||||||||||||| |||||| ||||| ||| || || || ||| | ||||  ||||||||||| | || || ||| |||||||| |   |||||||||    
T  9434540 gtgtgtttggattgagggtttacgaggg-aatagatggaagagttcacttttattttttaaattaggaacaatgtaaaatgttttttttttaataaatta 9434442  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||   |||||||||||||  |||||||||||||||    
T  9434441 agtggttttgaagtattatattatcatttatcatgtt 9434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 10028363 - 10028295
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||  || |||||||||| ||||  || ||||||||||| |||| | |||||||||||||||    
T  10028363 tgtgtttggacagagggtttaggagaggaagtgaggggagggtttactttttacttttaaattacggac 10028295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 21537021 - 21536981
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttat 272  Q
    |||| |||| |||||||||||||||||||| ||||||||||    
T  21537021 aaatgaattgagtgtgattgaagtattatatgatcatttat 21536981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 324
Target Start/End: Original strand, 42919880 - 42919912
Alignment:
Q  292 tttaaaaaatatttcatagtatccgtaatttaa 324  Q
    |||||||||||||| ||||||||||||||||||    
T  42919880 tttaaaaaatattttatagtatccgtaatttaa 42919912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 24560220 - 24560410
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||| | ||||||||||||||| ||| ||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24560220 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaa 24560319  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
     |||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  24560320 atgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcatagtgtcggtaatttaaaaatgaaaa 24560410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 146 - 367
Target Start/End: Original strand, 21773788 - 21774010
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    |||||||||||| ||||||||||||||| |||||| ||||| || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaattaagtg 21773887  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-cc 344  Q
    ||||||||| |||||| |||  |||||||||| |||||| ||||| ||||||||| ||||| |||| | |||||||||||||| |||| | |||||| ||    
T  21773888 tgattgaagaattatatgattgtttatcatgtaaatatgttaactttttaaaaaacatttcctagtgttcgtaatttaaaaataaaaagtaaaccctccc 21773987  T
Q  345 ctcctaaaccgtccatccaaaca 367  Q
    |||||||||| | ||||||||||    
T  21773988 ctcctaaacccttcatccaaaca 21774010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 25655213 - 25655009
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||| | |||| ||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25655213 gtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaa 25655114  T
Q  243 gtgtgattgaagtat--tataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaacc 340  Q
    |||||||||||||||  |||| ||||||||||||| |||||||| |||||||| |||||| ||||| |||| | |||||| |||||||||||| | ||||    
T  25655113 gtgtgattgaagtattatatatgatcatttatcatattaatatgttaactcttcaaaaaacatttcttagtgttcgtaatataaaaatgaaaagtaaacc 25655014  T
Q  341 ctccc 345  Q
    |||||    
T  25655013 ctccc 25655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 41110562 - 41110372
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||  |||||||| |||  ||| |||||| ||||| |||||||||||||||||| |||||||||||||| ||||||||||||    
T  41110562 gtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaattaa 41110463  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||  ||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  41110462 gtgtgattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaatatttcatagtgtccgtaatttaaaaatgaaaa 41110372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 18654842 - 18654639
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcattttt-aaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||| ||||| ||||||||||||||| ||| ||||| ||||  ||| | ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaatta 18654743  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||  ||||||||||||||||||||  | |||||    
T  18654742 agtgtaattgaagtattatatgatcatttatcatgttaatatgttaactcttcaaaaaatattttatagggtccgtaatttaaaaatgaaatctaaaccc 18654643  T
Q  342 tccc 345  Q
    ||||    
T  18654642 tccc 18654639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 146 - 365
Target Start/End: Complemental strand, 220635 - 220416
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    ||||||||| || ||||||||||| ||| ||| |||||  |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||     
T  220635 tgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagta 220536  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||||||| ||||| |||  ||||| ||||||||||| ||||| ||||||||| |||||||| | ||||||||||||||||||||| | ||||  |||    
T  220535 tgattgaagtgttataagattgtttattatgttaatatgttaactttttaaaaaacatttcataatgtccgtaatttaaaaatgaaaactaaacctcccc 220436  T
Q  346 tcctaaaccgtccatccaaa 365  Q
    ||||||||| ||||||||||    
T  220435 tcctaaaccctccatccaaa 220416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 163 - 367
Target Start/End: Complemental strand, 30200312 - 30200104
Alignment:
Q  163 taggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatag 262  Q
    ||||||||||| ||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||     
T  30200312 taggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagtactatat 30200213  T
Q  263 gatc---atttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtcc 358  Q
    ||||    ||||| |||||||||||  |||| ||||||||| |||||||||| ||||||||||||||||||||| | |||||| |||||||||||| |||    
T  30200212 gatcgttgtttattatgttaatatgtaaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccctcccctcctaaaccctcc 30200113  T
Q  359 atccaaaca 367  Q
    |||||||||    
T  30200112 atccaaaca 30200104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 37102380 - 37102165
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaatta 241  Q
    ||||||||||||||| |||||||||||||||          |||||| || || |||||||||||||||||||||||||||||||| ||||||||||| |    
T  37102380 gtgtgtttggattgagggtttaggaggggaa----------ggtttacttatcttttttaaattacggactatataacatgttttttctaaaataaatca 37102291  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    |||||| ||||||||||||| |||| || || ||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||| | |||||    
T  37102290 agtgtggttgaagtattatatgatcgtt-attatgttaatatgttaactttttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaactaaaccc 37102192  T
Q  342 t-ccctcctaaaccgtccatccaaaca 367  Q
    | |||||||||||| ||||||||||||    
T  37102191 tcccctcctaaaccctccatccaaaca 37102165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 145 - 346
Target Start/End: Complemental strand, 9312708 - 9312509
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacat---gtttttctaaaataaatta 241  Q
    ||||||||||||| ||||||||||||||      |||||||||| |||||| |||||||||||| |||||||||||||   | |||||||||||||||||    
T  9312708 gtgtttggattgagggtttaggaggggag-----gggagggtttgattttcttttttaaattaccgactatataacatcatgattttctaaaataaatta 9312614  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    |||||||||  ||||||||| |||  ||||||||||||||||| ||||| |||| ||||||||||||||| || ||||||||||||||||||   |||||    
T  9312613 agtgtgatttgagtattatatgattgtttatcatgttaatatgttaactttttacaaaatatttcatagtgtctgtaatttaaaaatgaaaatcaaaccc 9312514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 344
Target Start/End: Original strand, 52473920 - 52474119
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    |||||||||||||  |||| |||||||||   | ||||| ||| ||||||| ||||||||||||||| ||||||||||||| || ||||||||||||  |    
T  52473920 gtgtttggattgagagtttgggaggggaagaaatgggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaattacat 52474019  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctcc 344  Q
    ||||||||||||||||| ||   |||||||| |||||||| ||||| |||| |||||||||||||| ||||||||||||||||| |||| | ||||||||    
T  52474020 gtgattgaagtattatatgactgtttatcatattaatatgttaactttttacaaaatatttcataggatccgtaatttaaaaataaaaagtaaaccctcc 52474119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 141 - 332
Target Start/End: Complemental strand, 27542174 - 27541983
Alignment:
Q  141 ttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatt 240  Q
    ||||||| |||||| || |||||| |||||| | ||| ||||| ||||  ||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  27542174 ttgtgtgattggatcgagggtttacgaggggcagggaggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaatt 27542075  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    || |||||||||||||||||| |||| ||||||||||||||||| ||  | ||||| || ||||||||||| ||  ||||||||||||||||    
T  27542074 aactgtgattgaagtattatatgatcgtttatcatgttaatatgttagatttttaacaagtatttcatagtgtctctaatttaaaaatgaaa 27541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 179 - 333
Target Start/End: Original strand, 46556182 - 46556338
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtat--tataggatcatttatcatg 276  Q
    ||||| ||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||  |||| || | ||| |||||    
T  46556182 gggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattatatatgaccgtttgtcatg 46556281  T
Q  277 ttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||  ||||| |||||||||||| ||||||| ||||||||| |||||||||||    
T  46556282 ttaatatcttaactttttaaaaaatatgtcatagtgtccgtaattgaaaaatgaaaa 46556338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 179 - 327
Target Start/End: Complemental strand, 2387965 - 2387817
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||| |||||||||||    
T  2387965 gggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattatatgatcgtttatcatgtt 2387866  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    | |||  |||||  |||||||| ||| |||||| |||||||||||||||    
T  2387865 attattttaacttattaaaaaacattccatagtgtccgtaatttaaaaa 2387817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 143 - 283
Target Start/End: Complemental strand, 28582750 - 28582610
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||| ||| | ||||||||||||| ||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||    
T  28582750 gtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaa 28582651  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    ||||| |||||||||||||  ||| ||||| ||||||||||    
T  28582650 gtgtggttgaagtattatattatcgtttattatgttaatat 28582610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 181 - 333
Target Start/End: Complemental strand, 41040153 - 41040001
Alignment:
Q  181 gagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaa 280  Q
    ||||||||| |||||  |||||||||||||| || |||||||| |||| ||||||||| |||| ||||||||||||||||| |||  |||||||||||||    
T  41040153 gagggtttacttttcgcttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattatatgattgtttatcatgttaa 41040054  T
Q  281 tatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||| ||||| |||| ||||||||||||||| || ||||||||||| ||||||    
T  41040053 tatgttaactttttataaaatatttcatagtgtctgtaatttaaaattgaaaa 41040001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 143 - 321
Target Start/End: Complemental strand, 43005980 - 43005804
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||  |||| || | ||| |||| |||||||||| |||||||||| |  |||||||||||| ||||||||||||||||| |    
T  43005980 gtgtgtttggattgagggtttataagggaaaggaaagagaggatttaattttcttttttaaattccaaactatataacatatttttctaaaataaattta 43005881  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatt 321  Q
     | |||||||||||||||| |||  |||||||| |||||||| ||||| ||||||||||||||||||  ||||||||||    
T  43005880 atttgattgaagtattatatgatattttatcatattaatatgttaactttttaaaaaatatttcata--atccgtaatt 43005804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 145 - 283
Target Start/End: Original strand, 14897981 - 14898119
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 244  Q
    |||||||||||||  |||||||||||||| |||  |||   |||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagt 14898080  T
Q  245 gtgattgaagtattataggatcatttatcatgttaatat 283  Q
    ||||||||||||||||| |||| |||||| |||||||||    
T  14898081 gtgattgaagtattatatgatcgtttatcgtgttaatat 14898119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 144 - 284
Target Start/End: Original strand, 46204890 - 46205030
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    ||||||||||| || ||||||| ||| |||  || | ||| ||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  46204890 tgtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaag 46204989  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    |||||||||||||||||| ||||||||| ||| ||||||||    
T  46204990 tgtgattgaagtattatatgatcatttaacatattaatatg 46205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 327
Target Start/End: Original strand, 651770 - 651917
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||| ||| |||||||    
T  651770 gggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgattaaaatattatacgatcctttgtcatgtt 651869  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    | |||  ||| | ||| ||||| |||||||||| ||| |||||||||||    
T  651870 attattttaa-tttttcaaaaacatttcatagtttccataatttaaaaa 651917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 215 - 333
Target Start/End: Complemental strand, 36569072 - 36568954
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatc 314  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| |||  ||||||||||||||||| ||||| ||| ||||| |||||||||| |     
T  36569072 tatatcatgtttttctaaaataaattaagtgtgattgaactattatacgattgtttatcatgttaatatgttaactttttgaaaaacatttcatagtgtt 36568973  T
Q  315 cgtaatttaaaaatgaaaa 333  Q
    || ||||||||||||||||    
T  36568972 cgaaatttaaaaatgaaaa 36568954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 197 - 329
Target Start/End: Complemental strand, 10748484 - 10748345
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattatagg-------atcatttatcatgttaatatgctaac 289  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |       ||||||||||||||||||||| ||||    
T  10748484 tttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattatatgaccttttatcatttatcatgttaatatgttaac 10748385  T
Q  290 tctttaaaaaatatttcatagtatccgtaatttaaaaatg 329  Q
    | ||||||||| |||| ||| |  ||||||||||||||||    
T  10748384 tttttaaaaaacattttataatgcccgtaatttaaaaatg 10748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 367
Target Start/End: Original strand, 52185060 - 52185241
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttt-tctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatat 283  Q
    ||||| ||||| ||||||||||||  | ||||||||||||||| ||||||||||||||| | | |||||||||||||| |||  ||||||||||||||||    
T  52185060 gtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattatatgattgtttatcatgttaatat 52185159  T
Q  284 gctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    | ||||| |||| |||||||||  |||| ||| |||||||||||| |||||| |||||| |||||| ||||| | ||||||||||    
T  52185160 gttaactttttataaaatattt--tagtgtccataatttaaaaat-aaaaataaaccctcccctcccaaacccttcatccaaaca 52185241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 192 - 333
Target Start/End: Original strand, 55327422 - 55327563
Alignment:
Q  192 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactc 291  Q
    |||| |||||||||||||||||| |||||||| |||||| |||||||| || ||||||||||| |||||| | || ||||| ||||||||| |||||||     
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattatatgttcgtttattatgttaatacgctaactt 55327521  T
Q  292 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||| |||||||| | ||||| ||||||||| |||||    
T  55327522 tttaaaaaacatttcataatgtccgtgatttaaaaacgaaaa 55327563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 345
Target Start/End: Complemental strand, 16275875 - 16275744
Alignment:
Q  214 atataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtat 313  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | |  ||||||||||||||| | ||||| |||| |||| |||||||| | |    
T  16275875 atataacatgtttttctaaaataaatcaagtgtgattgaagtattatatggttgtttatcatgttaataagttaactttttataaaacatttcataatgt 16275776  T
Q  314 ccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||| |||||||||||||| | ||||| |||||    
T  16275775 ccgaaatttaaaaatgaatagtgaactctccc 16275744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 333
Target Start/End: Original strand, 37807131 - 37807273
Alignment:
Q  191 ttttcatttttaaattacggactatataacatgtttttctaaaataaa-ttaagtgtgattgaagtattataggatcatttatcatgttaatatgctaac 289  Q
    ||||| |||||||| |||| |||||||||||| |||||  |||||||| ||||||||||||||||||||||| |||| ||||||||||||||||  ||||    
T  37807131 ttttcttttttaaactacgaactatataacat-tttttaaaaaataaaattaagtgtgattgaagtattatatgatcgtttatcatgttaatatattaac 37807229  T
Q  290 tctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | ||||||||| |||||||||| |||  |||||||||| |||||    
T  37807230 tttttaaaaaacatttcatagtgtccaaaatttaaaaacgaaaa 37807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 142 - 261
Target Start/End: Complemental strand, 6803443 - 6803324
Alignment:
Q  142 tgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    |||||||||||||||| |||||||||||||||  || | ||| ||||||||||| |||||||||||| ||||||  || | |||||| ||||||||||||    
T  6803443 tgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagtttttataaaataaatta 6803344  T
Q  242 agtgtgattgaagtattata 261  Q
     ||||||||||| |||||||    
T  6803343 tgtgtgattgaactattata 6803324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 152 - 333
Target Start/End: Complemental strand, 40464103 - 40463922
Alignment:
Q  152 gattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattg 251  Q
    |||||| |||||| ||| ||||| || ||||| ||||| ||||| ||| ||||| | || ||| ||||||| |||||||||||||||||||||| |||||    
T  40464103 gattgagggtttatgagaggaatagaggggagagtttacttttcttttctaaatcaagggctacataacatatttttctaaaataaattaagtgagattg 40464004  T
Q  252 aagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    || | ||||| |||  |||||||||||| | |  |||   ||||||||| | || ||||| |||||||||||||||||||||    
T  40464003 aatttttatatgattgtttatcatgttattgttttaatattttaaaaaacaatttatagtgtccgtaatttaaaaatgaaaa 40463922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 54574597 - 54574484
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| |||||     ||||  ||||  ||||| ||||| |||||| |||||||||||| ||||||||||||||||||||    
T  54574597 gtgtgtttggattgagggtttaggaagggaa-----gggatagtttgtttttctttttttaattacagactatataacacgtttttctaaaataaattaa 54574503  T
Q  243 gtgtgattgaagtattata 261  Q
    | |||||||||||||||||    
T  54574502 gcgtgattgaagtattata 54574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 37236958 - 37237061
Alignment:
Q  175 ggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    ||||||||||| ||| |||||||||||||||||| |||  || || ||||||||  |||||||||||||||||||||||||| || | ||||||||||||    
T  37236958 ggaagggagggcttacttttcatttttaaattacagacgctacaaaatgtttttg-aaaataaattaagtgtgattgaagtactaaatgatcatttatca 37237056  T
Q  275 tgtta 279  Q
    |||||    
T  37237057 tgtta 37237061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 326
Target Start/End: Original strand, 12790377 - 12790559
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| |||||||||| ||||  ||  ||||| |||| ||||| |||||| |||   | |||||||||||||||||||| |||||||||||    
T  12790377 tgtgtttggattgagggtttaggagaggaagagagaggagg-tttacttttcttttttatattgtaggctatataacatgtttttctataataaattaag 12790475  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaa-ctctttaaaaaatatttcatagtatccgtaatttaaaa 326  Q
    ||| || |||||| |||| |||| || ||||||||| |||  |||  | |||||||||||||||||| | | | ||||||||||    
T  12790476 tgtaatcgaagtaatatatgatctttcatcatgttattattttaatttttttaaaaaatatttcataatgttcataatttaaaa 12790559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 44412364 - 44412499
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| ||||| |||||||||||||||  || ||||||  | | |||| |||||||||||||| || || ||| |  ||||| |||||||||||||    
T  44412364 gtgtgtttgaattgagggtttaggaggggaagagaggggaggactcattttttatttttaaattacgaacaatgtaaaacatttttttaaaataaattaa 44412463  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||||||| ||| ||||||||||||    
T  44412464 gtgtttttgaagtattatatgatgatttatcatgtt 44412499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 146 - 278
Target Start/End: Complemental strand, 10943852 - 10943720
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    |||||||||||| |||||| ||||| ||  || ||||||||| | |||| |||||||||||||| || ||  || |||||||| ||||||||||||||||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  246 tgattgaagtattataggatcatttatcatgtt 278  Q
    |  |||||||||||||  || |||||| |||||    
T  10943752 tttttgaagtattatataattatttattatgtt 10943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 197 - 367
Target Start/End: Original strand, 40858622 - 40858793
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaa 296  Q
    ||||||||||||| || || ||| |||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||  ||   | | | || ||    
T  40858622 tttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattatatgatcatttatcatgttgtta-attcaattttcaa 40858720  T
Q  297 aaaat-atttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    || || |||| ||| | ||||||||||||||| ||||| | |||||| |||||||||||| ||||||||||||    
T  40858721 aagatcattttataatgtccgtaatttaaaaaagaaaactaaaccctcccctcctaaaccctccatccaaaca 40858793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 21090312 - 21090177
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||||||||||||| |||| ||| | ||||  | | ||||  ||||||||||| | || || ||| || ||||| |||||||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagggaggagaggactcacttttattttttaaattatgaacaatgtaaaatatttttttaaaataaattaa 21090213  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  ||||||||||||| ||| || |||||||||    
T  21090212 gtgtttttgaagtattatatgataatatatcatgtt 21090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 45663330 - 45663250
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||||| |||||| || ||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  45663330 tttttcaattacggacaatataaaatattttt-taaaataaattatatgtgattgaagtattataagatcatttatcatgtt 45663250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 51819317 - 51819228
Alignment:
Q  192 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaat 281  Q
    ||||||||||||||    || ||||||| || ||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  51819317 tttcatttttaaatattagattatataatatatttttttaaaataaatttagtgtgattgaagtattatacgatcgtttatcatgttaat 51819228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 278
Target Start/End: Original strand, 41414084 - 41414216
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    ||||| |||||| |||||||||||| || ||| ||||||| | | ||||  ||||||||||| | || |  ||| |||||||| |||||||||| ||| |    
T  41414084 tgtttagattgagggtttaggagggaaagggaggggagggctcacttttattttttaaattatgaacaaggtaaaatgtttttttaaaataaatcaagcg 41414183  T
Q  246 tgattgaagtattataggatcatttatcatgtt 278  Q
    |  ||||||||||||| ||||||||||||||||    
T  41414184 tttttgaagtattatatgatcatttatcatgtt 41414216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 275
Target Start/End: Complemental strand, 17474446 - 17474315
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| |||| |||||||||| ||| ||||| ||| | ||||  ||||||||||||| |  || ||| || |||||  |||||||||||||    
T  17474446 tgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaag 17474347  T
Q  244 tgtgattgaagtattataggatcatttatcat 275  Q
    |||  ||||||||||||  ||| |||||||||    
T  17474346 tgtttttgaagtattatttgattatttatcat 17474315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 46978466 - 46978565
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||| | |||| |||||||||||||| ||  | ||| |||||||| ||||||||||||| |||  |||||||||||||  |||||||||||||||    
T  46978466 gggagggttcacttttaatttttaaattacgaacggtgtaaaatgtttttttaaaataaattaaatgtttttgaagtattatataatcatttatcatgtt 46978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 42699799 - 42699721
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||||||||| || |||||| || |||||  ||||||||||||||||  ||||||||||||| |||||||||||||    
T  42699799 tttttaaattacgaacaatataaaatatttttaaaaaataaattaagtgtttttgaagtattatatgatcatttatcat 42699721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Complemental strand, 16884158 - 16884077
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||| ||||| || || ||| |||| ||| |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  16884158 tttttaagttacgaacaatgtaaaatgtctttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 16884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 24560458 - 24560393
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || ||||||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  24560458 gtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattac 24560393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 34641049 - 34641130
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| || || ||| | | |||| |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  34641049 tttttaaattacgaacaatgtaaaaggattttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 34641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 34641231 - 34641162
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||||| ||| ||||| ||||||||||||||||    
T  34641231 gtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggac 34641162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 24253724 - 24253860
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaaggg-agggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatta 241  Q
    ||||||||||||||| |||||||||||| || ||| ||| || ||| | |||| |||||||||||| |  | || ||| ||  |||| ||||||||||||    
T  24253724 gtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaattatgagcaatgtaaaataattttttaaaataaatta 24253823  T
Q  242 agtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||  ||||||| |||||  |||||||||||||||    
T  24253824 agtgtttttgaagtgttatataatcatttatcatgtt 24253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 27197890 - 27197755
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| ||||| |||||| ||| ||||  ||| |||||  | | ||||  ||||||||||||| || || |||||| ||||| |||||||||||||    
T  27197890 gtgtgtttgaattgaaggtttaagagaggaagagaaaggaggactcacttttattttttaaattacgaacaatgtaacatatttttttaaaataaattaa 27197791  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    || |  || |||||||||| |||||| |||||||||    
T  27197790 gtatatttaaagtattatatgatcatctatcatgtt 27197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 54996881 - 54996786
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||| ||||| |||||||||||| || |||| ||  ||||| | |||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  54996881 ggaggggttacttttcttttttaaattacagattataaaa--tgtttat-taaaatgaatgaagtgtgattgaagtattatatgatcatttatcatgtt 54996786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 279 - 345
Target Start/End: Complemental strand, 28581291 - 28581225
Alignment:
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||| ||||| |||||||||||||||| | |||| |||||||||||||||||| | |||||||||    
T  28581291 aatatgttaactttttaaaaaatatttcacaatatctgtaatttaaaaatgaaaactaaaccctccc 28581225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 274
Target Start/End: Original strand, 48683672 - 48683746
Alignment:
Q  200 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    |||||||||| || || ||| |||||||| |||||||||||||||||  ||||| ||||||| ||||||||||||    
T  48683672 ttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaaatattatatgatcatttatca 48683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 8432462 - 8432365
Alignment:
Q  181 gagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||| |||||| ||||||||| |||| || ||  || |||||||| |||||| ||||||||||  |||||||||||||  || ||||||||||||    
T  8432462 gagggttcaattttaatttttaaactacgaacaatgaaaaatgtttttttaaaatgaattaagtgtttttgaagtattataaaattatttatcatgtt 8432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 18654603 - 18654672
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||||||||| ||  || |||||||||||  |||||||||||||||||||||    
T  18654603 gtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggac 18654672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 28581189 - 28581254
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || ||||||| || |||| ||| ||||||||||| ||||||||||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaattac 28581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 31684362 - 31684399
Alignment:
Q  216 ataacatgtttttctaaaataaattaagtgtgattgaa 253  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31684362 ataacatgtttttctaaaataaattaagtgtgattgaa 31684399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 41110324 - 41110393
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || | ||||||||||||| ||| | || |||||| ||||||||||||||||||||||    
T  41110324 gtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggac 41110393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 25179928 - 25180032
Alignment:
Q  174 tggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatc 273  Q
    |||| ||||||  ||| ||||||||||||||||| ||||  ||||| ||||| ||   |||||| ||||||||||||||| ||||||| ||||| ||| |    
T  25179928 tggaggggaggacttacttttcatttttaaattatggacactataaaatgttctttggaaataatttaagtgtgattgaaatattatatgatcacttacc 25180027  T
Q  274 atgtt 278  Q
    |||||    
T  25180028 atgtt 25180032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 55428619 - 55428551
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||||| ||||||||||||||| ||| |||| | |||| ||||| | ||||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggac 55428551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 36568907 - 36568969
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatt 206  Q
    |||||||||||| || |||||||||| |||||||| ||||| |||| |||||||||||||||||    
T  36568907 gtgtgtttggatggagggtttaggagtggaatggaggggagagttt-attttcatttttaaatt 36568969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 42772123 - 42772170
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  42772123 aaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 42772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 13083010 - 13082945
Alignment:
Q  236 aaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaata 302  Q
    |||| |||||| |||||||||||||| |||| ||||| ||||||||||| ||||| |||||||||||    
T  13083010 aaatgaagtgtaattgaagtattatatgatcgtttattatgttaatatgttaact-tttaaaaaata 13082945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 24253963 - 24253894
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||| ||||||| ||| || ||| |||| ||||| ||||||||||||||||    
T  24253963 gtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggac 24253894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 26136022 - 26135969
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| |||  |||||||||| ||||| ||||||||||||||||    
T  26136022 ggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggac 26135969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 31894056 - 31894019
Alignment:
Q  216 ataacatgtttttctaaaataaattaagtgtgattgaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  31894056 ataacatgtttttctaaaataaattaaatgtgattgaa 31894019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 49815456 - 49815559
Alignment:
Q  174 tggaagggagggtttaattttcatttttaaattacggacta-tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttat 272  Q
    |||| ||||||| ||| ||||| ||||||||||||  | || ||||| ||||||||  ||||||||||||| ||||||||||||||||| ||||||| ||    
T  49815456 tggaggggagggcttacttttcttttttaaattaca-agtactataaaatgttttta-aaaataaattaagcgtgattgaagtattatatgatcattgat 49815553  T
Q  273 catgtt 278  Q
    | ||||    
T  49815554 cttgtt 49815559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 25654991 - 25655039
Alignment:
Q  161 tttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    ||||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  25654991 tttaggaggggaagggaggggagggtttacttttcatttttatattacg 25655039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 47989133 - 47989070
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||| |||||||| ||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  47989133 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 47989070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 47998420 - 47998357
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||| |||||||| ||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  47998420 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 47998357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 279
Target Start/End: Complemental strand, 48007707 - 48007644
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||| |||||||| ||||||||||||| ||||||||||| ||||||  || |||||||||||||    
T  48007707 tataaaatgttttt-taaaataaattaaatgtgattgaagcattataaaattatttatcatgtta 48007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 52474140 - 52474088
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||||||||| |||  |||||||||| |||| ||||||||||||||||    
T  52474140 ggtttaggaggggaagggagaggagggtttactttttatttttaaattacgga 52474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 26135854 - 26135932
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||||||| | || || ||| ||||||||  ||||||||||||||||  |||||||||||||  || |||||||||    
T  26135854 tttttaaattatgaacaatgtaaaatgttttttaaaaataaattaagtgtttttgaagtattatataattatttatcat 26135932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 9312506 - 9312539
Alignment:
Q  175 ggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||||| |||||||||||||||||||    
T  9312506 ggaagggagggtttgattttcatttttaaattac 9312539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 27541937 - 27541998
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    |||||||||||| ||||||||||||||| ||| | || |||| |  ||||||||||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaatta 27541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 30200127 - 30200160
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||| ||||||||||||||||||||||    
T  30200127 gggagggtttagttttcatttttaaattacggac 30200160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 37102188 - 37102221
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||| ||||||||||||||||||||||    
T  37102188 gggagggtttagttttcatttttaaattacggac 37102221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 41039953 - 41040018
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || |||||||||||||||  ||  | ||| ||||||||||| |||||||||||    
T  41039953 gtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattac 41040018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 367
Target Start/End: Complemental strand, 46978496 - 46978443
Alignment:
Q  315 cgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaaca 367  Q
    |||||||||||||| |||| |||||||| |||||||||||| || |||||||||    
T  46978496 cgtaatttaaaaattaaaagtgaaccctcccctcctaaaccctcaatccaaaca 46978443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 46556368 - 46556317
Alignment:
Q  160 gtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||| |||||||| |||||| |||| ||||||||||| ||||||||||    
T  46556368 gtttaggagaggaatggaggggagg-tttacttttcatttttcaattacggac 46556317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 12234013 - 12234215
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| || |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  12234013 gtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaa 12234112  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||| |||| ||| |||||| ||| ||||||||||||||||| | ||||||| ||||| |||| ||||||||||||||||||||| | ||||||    
T  12234113 gtgtgattgatgtataatatgatcatatattatgttaatatgctaactttataaaaaacatttcgtagtgtccgtaatttaaaaatgaaaactaaaccct 12234212  T
Q  343 ccc 345  Q
    |||    
T  12234213 ccc 12234215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 30010335 - 30010537
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  30010335 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaattaa 30010434  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||| ||||||||||||| |||| ||||| ||||||||||| ||||| ||||||||| ||||| |||| |||||||||| |||||||||| | ||||||    
T  30010435 gtgtggttgaagtattatatgatcgtttataatgttaatatgttaactatttaaaaaacatttcgtagtgtccgtaatttcaaaatgaaaagtaaaccct 30010534  T
Q  343 ccc 345  Q
    |||    
T  30010535 ccc 30010537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 32951559 - 32951369
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  ||||||||| |||| ||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  32951559 gtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaattaa 32951460  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| |||| |||| ||||||| || |||||||||||||||||||||    
T  32951459 gtgtgattgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcattgtgtccgtaatttaaaaatgaaaa 32951369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 344
Target Start/End: Complemental strand, 38510135 - 38509934
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||| | ||||||||||||||| ||| ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||| ||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaa 38510036  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||||  ||| |||||| |||||| ||| ||| | ||||||| | |||||||||| ||||||||||||||||||||| ||||||||    
T  38510035 gtgtgattgaagtattatattatcgtttatcgtgttaagatgttaattttttaaaagacatttcatagtgtccgtaatttaaaaatgaaaagtgaaccct 38509936  T
Q  343 cc 344  Q
    ||    
T  38509935 cc 38509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 40095175 - 40094972
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaatta 241  Q
    ||||||||||||||| ||||||| |||  || |||||| |||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||    
T  40095175 gtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaattacagactatataacatgttttttctaaaataaatta 40095076  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccc 341  Q
    |||||||||||||||||||| |||| |||||||||||||| || ||||| |||| |||| |||||||||| ||||||||||||||||||||| | |||||    
T  40095075 agtgtgattgaagtattatatgatcgtttatcatgttaatttgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccc 40094976  T
Q  342 tccc 345  Q
    ||||    
T  40094975 tccc 40094972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 41498407 - 41498597
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||  || ||||||||||| ||||| ||||||||||| | ||||| ||||||| |||||||  |||| ||||    
T  41498407 gtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagttaa 41498506  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||||||||||||||||||| |||| ||||||||||||||||| ||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  41498507 gtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtgtccgtaatttaaaaatgaaaa 41498597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 35349703 - 35349503
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||| | |||||| |||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |||    
T  35349703 gtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaactaa 35349604  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    | || |||||||||||||| |||  ||||||||||||||||| ||||| |||| |||| |||||  ||| ||||||||||||||||||||| | ||||||    
T  35349603 gggttattgaagtattatatgattgtttatcatgttaatatgttaactttttataaaacatttc--agtgtccgtaatttaaaaatgaaaagtaaaccct 35349506  T
Q  343 ccc 345  Q
    |||    
T  35349505 ccc 35349503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 147 - 345
Target Start/End: Complemental strand, 2859169 - 2858971
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgt 246  Q
    ||||||||||| ||||||||||||||| ||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgt 2859070  T
Q  247 gattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||||||||||||| |||  ||||| |||| | |||| ||||| |||||| || |||||||||  || |||||||| ||||||||| | |||||||||    
T  2859069 gattgaagtattatatgattgtttataatgtaagtatgttaactttttaaataacatttcatagggtctgtaatttagaaatgaaaagtaaaccctccc 2858971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 333
Target Start/End: Original strand, 8529838 - 8529992
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| ||||||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||| ||||||    
T  8529838 gggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattatatgatcgtttaccatgtt 8529937  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  8529938 aatatgttaactttttaaaaaatatttcatagtgtccgtaatttaaaaatgaaaa 8529992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 332
Target Start/End: Complemental strand, 50744486 - 50744332
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||  ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  50744486 gggagggtttgtttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgtt 50744387  T
Q  279 aatatgctaactctttaa-aaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    |||||| ||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  50744386 aatatgttaactctttaaaaaaacatttcatagtgtccgtaatttaaaaatgaaa 50744332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 144 - 343
Target Start/End: Complemental strand, 49946828 - 49946629
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| || ||||| |||||| ||| | ||||||||| ||||| | ||||||  |  ||||||||||||||||||| |||||||||||||     
T  49946828 tgtgtttggattgagggattaggcggggaagggatgtgagggtttacttttcttgtttaaaccagagactatataacatgtttttttaaaataaattaaa 49946729  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||| || ||||||||||| ||||| |||||||||||||||||| |||| |||||||    
T  49946728 tgtgattgaagtattatatgataatttatcatgttaatatgttaacttttaaaaaaatattttatagtgtccgtaatttaaaaatgacaaataaaccctc 49946629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 144 - 333
Target Start/End: Original strand, 51597672 - 51597861
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaag 243  Q
    |||||||||||||| |||||| ||  |||| ||| ||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaag 51597771  T
Q  244 tgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||||| |||  |||||||| |||||||| ||||| ||||||||  |||||||||| | | |||||||||| ||||||    
T  51597772 tgtgattgaagtattatatgattgtttatcatcttaatatgttaactttttaaaaaccatttcatagtgttcataatttaaaattgaaaa 51597861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 148 - 300
Target Start/End: Original strand, 10391880 - 10392032
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtg 247  Q
    |||||||||| | |||||||||||||  || ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtg 10391979  T
Q  248 attgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaa 300  Q
    ||| |||||||||| || | ||||||||||||||||| ||||| |||||||||    
T  10391980 attaaagtattatatgaccgtttatcatgttaatatgttaactttttaaaaaa 10392032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 330
Target Start/End: Complemental strand, 45585884 - 45585739
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| | || ||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||| |||| |||||||||||||||||    
T  45585884 gtttacttttcctcttaaaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagtactatatgatcgtttatcatgttaatatg 45585785  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatga 330  Q
     ||||| || |||||| |||| ||||||||  ||||||||||||||    
T  45585784 ttaacttttaaaaaaacattttatagtatctataatttaaaaatga 45585739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 341
Target Start/End: Complemental strand, 36285741 - 36285617
Alignment:
Q  217 taacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccg 316  Q
    |||||||||||| ||||||| || ||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| ||||| | ||    
T  36285741 taacatgtttttttaaaatatatcaagtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaatattttatagtgttcg 36285642  T
Q  317 taatttaaaaatgaaaaatgaaccc 341  Q
    |||||||||||||| |||| |||||    
T  36285641 taatttaaaaatgataaataaaccc 36285617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 26941074 - 26940882
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||          |||| ||||||| |||||||| |||||| | ||||||||||||||||||||||||| ||    
T  26941074 gtgtgtttggattgagggtttaggaggggaa----------ggttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatcaa 26940985  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| ||   ||||  ||||||||| | ||||| || || |||||||||||||| ||  |||||||||||| |||| ||||||||    
T  26940984 gtgtgattgaagtattatatgactgtttacgatgttaataagttaacttttaaacaaatatttcatagtgtctataatttaaaaataaaaagtgaaccct 26940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 343
Target Start/End: Original strand, 6563581 - 6563779
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| |||||  |||| ||||  |||| ||  |||||||||| ||||| ||||||||| || ||||||||||||||| ||||||||||||||||     
T  6563581 gtgtgtttgaattgagagtttcggagaagaattgagaggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattat 6563679  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||| |||||| ||||||| |||| ||||||||||||||||  |||||  |||||||||| |||||||| |||   ||||||||||||||| | ||||||    
T  6563680 gtgtcattgaattattatatgatc-tttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccct 6563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 7444481 - 7444700
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacat-----------------gtt 225  Q
    ||||||| ||||||| ||||| ||||| ||| ||||||||||||||| ||||| |||||||||||||||| |||| ||||                 |||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggaccatatgacatgattttctaaatgacatgtt 7444580  T
Q  226 tttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaa 325  Q
    |||||||| ||||  ||||||||||||||||||||| |||| ||||| ||||||||||| ||||| ||||||||  |||| ||||| |||||||||| ||    
T  7444581 tttctaaattaaaccaagtgtgattgaagtattatatgatcgtttattatgttaatatgttaactttttaaaaatcattttatagtgtccgtaattttaa 7444680  T
Q  326 aatgaaaaatgaaccctccc 345  Q
    |||||||| | |||||||||    
T  7444681 aatgaaaactaaaccctccc 7444700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 365
Target Start/End: Complemental strand, 44211097 - 44210925
Alignment:
Q  192 tttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactc 291  Q
    |||| ||| |||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  |||  ||| |     
T  44211097 tttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattatatgatcgtttatcatgttgttattttaattt 44210998  T
Q  292 tttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct-ccctcctaaaccgtccatccaaa 365  Q
    |||| | || ||||||| |  ||| ||||||||||| ||||| | |||||| ||||| |||| | ||||||||||    
T  44210997 tttagagaacatttcatgg--tccataatttaaaaacgaaaagtaaaccctcccctcttaaatcctccatccaaa 44210925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 224 - 345
Target Start/End: Original strand, 41676363 - 41676486
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaact--ctttaaaaaatatttcatagtatccgtaatt 321  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||| |      |||||| |||| ||||| |||||||||    
T  41676363 tttttctaaaataaattaagtgtgattgtagtattatatgatcgtttatcatgttaatatgttaatttaaaaaaaaaaacattttatagtgtccgtaatt 41676462  T
Q  322 taaaaatgaaaaatgaaccctccc 345  Q
    |||||||||||| | |||||||||    
T  41676463 taaaaatgaaaagtaaaccctccc 41676486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 35927817 - 35927951
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||||||||||||||||| ||||||| | |  |||  ||||||||||| | || || ||| || |||||||||||||||||||    
T  35927817 gtgtgtttggattgaggttttaggaggggaatggaggggagggctcacatttattttttaaattatgaacaatgtaa-atatttttctaaaataaattaa 35927915  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    || |  ||||||||||||| ||||||||||||||||    
T  35927916 gtatttttgaagtattatatgatcatttatcatgtt 35927951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 276
Target Start/End: Complemental strand, 1085731 - 1085598
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||| || ||||||||||||||| ||| | || |  | | ||||  ||||||||||||| || || ||| |||||||| |||||||||||||    
T  1085731 gtgtgtttggatagagggtttaggaggggaagggaggagatgactcacttttattttttaaattacgaaccatgtaaaatgtttttttaaaataaattaa 1085632  T
Q  243 gtgtgattgaagtattataggatcatttatcatg 276  Q
    ||||  ||||||||||||| ||||||||||||||    
T  1085631 gtgtttttgaagtattatatgatcatttatcatg 1085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 33643271 - 33643403
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| ||||||||||||||| |||||||| |  | | ||||  ||||||||||||| |  || ||| |||||||| |||||||||||||    
T  33643271 gtgtgtttagattgaaggtttaggaggggaagggaagggatgactcacttttattttttaaattacgaaaaatgtaaaatgtttttttaaaataaattaa 33643370  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| ||||||| |||||    
T  33643371 gtgtttttgaagtattatatgatcattcatcat 33643403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 20576269 - 20576185
Alignment:
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||  ||| ||||||||||||||||||||    
T  20576269 tgattgaagtattatatgatcgtttatcatgttaatatattaactctttaaaaaacatttc--agtgtccgtaatttaaaaatgaaa 20576185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 525341 - 525208
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaatta 241  Q
    ||||||||||||||| ||||||||| ||||| |||||| || ||| | |||| |||||||||||||  || |  ||| ||| ||||| ||||||||||||    
T  525341 gtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaattacaaacaacgtaaaatgttttttttaaaataaatta 525242  T
Q  242 agtgtgattgaagtattataggatcatttatcat 275  Q
    ||| || |||||||||||||  ||||||||||||    
T  525241 agtttgtttgaagtattatataatcatttatcat 525208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 12234251 - 12234182
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  12234251 gtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggac 12234182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 285
Target Start/End: Complemental strand, 2470968 - 2470830
Alignment:
Q  141 ttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatt 240  Q
    |||||||||||||||||||||||||||||||||          |||||| ||||| |||||||||||   |||||||||||||||||||||||||| | |    
T  2470968 ttgtgtgtttggattgatggtttaggaggggaa----------ggtttacttttcttttttaaattatcaactatataacatgtttttctaaaatacact 2470879  T
Q  241 aagtgtgattgaag----tattataggatcatttatcatgttaatatgc 285  Q
    || |||||||||||    ||||||| ||   ||||||||||||||||||    
T  2470878 aattgtgattgaaggaagtattatatgactgtttatcatgttaatatgc 2470830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 26324017 - 26324112
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaa-----tggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaa 233  Q
    ||||||||||||||| |||||||||||||||      ||| |||||||||| |||||| ||||||||||||  |||||||||||||||||||||||    
T  26324017 gtgtgtttggattgagggtttaggaggggaagggaggggaggggagggtttgattttcttttttaaattaccaactatataacatgtttttctaaa 26324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 311
Target Start/End: Original strand, 42230615 - 42230709
Alignment:
Q  217 taacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagt 311  Q
    ||||||||||||  ||||||||||||||||||||||||||||||| |||  ||||| ||||||||||  ||||| | ||||||| |||| |||||    
T  42230615 taacatgttttttaaaaataaattaagtgtgattgaagtattatatgattgtttattatgttaatattttaactttataaaaaacattttatagt 42230709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 40094936 - 40095005
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| | | ||||||||||| ||||||||||||||||||||||    
T  40094936 gtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggac 40095005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 43553170 - 43553053
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatt-acggactatataacatgtttttctaaaataaattaag 243  Q
    ||||||||||||   ||||||||| |||| ||| || ||  |||| |||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||    
T  43553170 gtgtttggattgggagtttaggagaggaaaggatggtagaatttacttttcatttttaaatttacggattatataacttgtttctctaaaataaattaag 43553071  T
Q  244 tgtgattgaagtattata 261  Q
    ||| | |||| |||||||    
T  43553070 tgttactgaaatattata 43553053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 279
Target Start/End: Original strand, 49832555 - 49832683
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtg 247  Q
    |||||||| | |||||||||||||||  ||  |||| | ||| ||||| |||||||||||| ||  ||||||  |||||||  |||||||| ||||||||    
T  49832555 tttggattcaaggtttaggaggggaagtgagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtg 49832654  T
Q  248 attgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||   ||||||||||||||||    
T  49832655 attgaagtattat---atcatttatcatgtta 49832683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 40709532 - 40709401
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||||||||||||| ||| ||||||||  | ||||  ||||||||||| | || || ||| | ||||||  |||| |||||||    
T  40709532 gtgtgtttggattgaggatttaggaggggaacggaggggagggtc-acttttattttttaaattatgaacaatgtaaaaggttttttaaaaagaaattaa 40709434  T
Q  243 gtgtgattgaagtattataggatcatttatcat 275  Q
    ||||  ||||||||||||| |||||||||||||    
T  40709433 gtgtttttgaagtattatatgatcatttatcat 40709401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 20576136 - 20576205
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| ||| ||||| |||||  |||||||||||||||||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggac 20576205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 30010573 - 30010504
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||| ||||||| ||| ||||||||||| |||||||||| |||||||||||    
T  30010573 gtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggac 30010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 38509897 - 38509966
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||||| |||  |||||||| | ||||||||||||||||||||||    
T  38509897 gtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggac 38509966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 50079569 - 50079493
Alignment:
Q  199 tttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    |||||| |||| || |||||| |||||||| |||||||||||||||||  || |||||||||| |||||||||||||    
T  50079569 tttaaagtacgaacaatataaaatgtttttttaaaataaattaagtgtttttaaagtattatatgatcatttatcat 50079493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 2506597 - 2506671
Alignment:
Q  198 ttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttat 272  Q
    ||||||||||||  | |||||| ||||||||  ||||||||||||||||  ||||||||||||| ||||||||||    
T  2506597 ttttaaattacgaccaatataaaatgttttttcaaaataaattaagtgtttttgaagtattatatgatcatttat 2506671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 43552108 - 43552037
Alignment:
Q  268 tttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctc 343  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||     ||||||||||||||||||||| |||||||    
T  43552108 tttatcatgttaatatgttaactttttaaaaaacatttcata----acgtaatttaaaaatgaaaaataaaccctc 43552037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 51303544 - 51303490
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  51303544 tttttttaaaataaattaagtgtttttgaagtattatatgatcatttatcatgtt 51303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 2470733 - 2470818
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    |||||||||||| || |||||||||||||||  ||| |||||||||  ||| ||||||||||||||| ||  ||||| ||||||||    
T  2470733 gtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgttttt 2470818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 2858935 - 2859000
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || |||||||||||| || ||| ||||||||||| ||||||||| ||||||||    
T  2858935 gtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattac 2859000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 12108133 - 12108086
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  12108133 aaaataaattaactgtgattgaagtatcataagatcatttatcatgtt 12108086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 27739127 - 27739189
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||    
T  27739127 tataaaatgttttt-taaaatcaattaagtgtgattgaagtatttaatgatcatttatcatgtt 27739189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 42742478 - 42742416
Alignment:
Q  215 tataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||| |||||||| ||||||||||||||||||||||||||| |||| ||  ||||||||||||    
T  42742478 tataaaatgttttt-taaaataaattaagtgtgattgaagtactatatgactatttatcatgtt 42742416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 51582072 - 51582119
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||    
T  51582072 aaaataaattcagtgtgattgaagtattacatgatcatttatcatgtt 51582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 35349469 - 35349536
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || |||||| |||||||  ||  ||||||||||| ||||||||||||||||||||||    
T  35349469 gtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggac 35349536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 41498646 - 41498576
Alignment:
Q  143 gtgtgtttggattgatggtttaggagggg-aatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| ||  |||||||||||| || ||| |||||| |||| ||||||||||||||||||||||    
T  41498646 gtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggac 41498576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 43551999 - 43552065
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacg 209  Q
    |||||||||||| || |||||||| || ||| ||| | ||||||||| |||||||||||||||||||    
T  43551999 gtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaattacg 43552065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 25268345 - 25268398
Alignment:
Q  221 atgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    |||| ||| |||||||||||||||||  ||||||||||||| ||||||||||||    
T  25268345 atgtatttttaaaataaattaagtgtttttgaagtattatatgatcatttatca 25268398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 28770962 - 28770897
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||| || |||||||||||| || |||  |||||||||| |||| |||||||||||||    
T  28770962 gtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaattac 28770897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 41676486 - 41676437
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgttttt 228  Q
    ||||||||||| ||||||||||||||||||||||  ||||| ||||||||    
T  41676486 gggagggtttacttttcatttttaaattacggacactataaaatgttttt 41676437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 35513037 - 35512969
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||| || ||||||||||||||| ||| ||||||| ||| ||||  ||||||||||| ||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggac 35512969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 275
Target Start/End: Complemental strand, 51303779 - 51303685
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    |||||||||  ||||| |||| |||||| | ||  ||||| |||||||| |||| | ||||||||||||||||| ||||||| ||||||| |||||    
T  51303779 ggagggtttccttttctttttaaaattatgaacactataaaatgtttttttaaa-tcaattaagtgtgattgaactattatatgatcattaatcat 51303685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 1085492 - 1085562
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaatttt-catttttaaattacggac 212  Q
    |||||||||||| || ||||||||||||| ||||| ||||||  ||| |||| | ||||||||||||||||    
T  1085492 gtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggac 1085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 20607458 - 20607412
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggttta 189  Q
    |||||||||||| || ||||||||||||||| ||| |||||||||||    
T  20607458 gtgtgtttggatggagggtttaggaggggaagggaggggagggttta 20607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 275
Target Start/End: Original strand, 49065548 - 49065590
Alignment:
Q  233 aataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||||||||||||||||||||||||| ||  |||||||||    
T  49065548 aataaattaagtgtgattgaagtattatatgaaaatttatcat 49065590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 20607311 - 20607360
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgttaat 281  Q
    |||||||||||||||  ||||||||||||| ||| || ||||||||||||    
T  20607311 aaataaattaagtgtttttgaagtattatatgataatatatcatgttaat 20607360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 35928053 - 35927988
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    ||||||||||||||| || |||| ||||||| || ||||| | |||| ||||| ||||||||||||    
T  35928053 gtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattac 35927988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 8530039 - 8529971
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||  |  |||||||||||||| ||| | ||  ||||| ||||||||||||||||||||||    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggac 8529971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 344
Target Start/End: Original strand, 28770852 - 28770925
Alignment:
Q  269 ttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctcc 344  Q
    |||||||||||||||| ||| | |||| |||| ||||||||  ||  ||||||||||||| |||||| ||||||||    
T  28770852 ttatcatgttaatatgttaattttttataaaacatttcata--atgtgtaatttaaaaataaaaaataaaccctcc 28770925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 40964807 - 40964771
Alignment:
Q  176 gaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  40964807 gaagggagagtttacttttcatttttaaattacggac 40964771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 3e-55; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 143 - 367
Target Start/End: Complemental strand, 21607085 - 21606860
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||  ||   ||  |||||  |||| ||||||||||||  ||||||| | ||||||||||||||||||| ||    
T  21607085 gtgtgtttggattgagggtttaggaggggaagagagatgaatgtttacatttcgtttttaaattacaaactatattatatgtttttctaaaataaataaa 21606986  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||| |||||||||||| |||| ||||||||||||||||| ||||| |||| |||| |||||||||| ||||||||||||||||||||| | ||||||    
T  21606985 gtgtgactgaagtattatacgatcgtttatcatgttaatatgttaactttttataaaacatttcatagtttccgtaatttaaaaatgaaaagtaaaccct 21606886  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||||||||| ||||||||||||    
T  21606885 cccctcctaaaccctccatccaaaca 21606860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 143 - 346
Target Start/End: Original strand, 14515476 - 14515677
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||  ||||| |||||||||||||||||| ||||  ||||| |||||||||||||||    
T  14515476 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagataa--tgtttctctaaaataaattaa 14515573  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||| ||||||||||||  ||||||||||||||| ||||| |||||||| ||||||||||| ||||| | | ||||||||||||||||  | ||||||    
T  14515574 gtgtgaatgaagtattatattatcatttatcatgttcatatgttaactcttcaaaaaatattttatagtgttcataatttaaaaatgaaatctaaaccct 14515673  T
Q  343 ccct 346  Q
    ||||    
T  14515674 ccct 14515677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 4097754 - 4097563
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttttt-ctaaaataaatta 241  Q
    ||||||||||||||| |||||| |||||||| ||| || |||||| | ||||| |||||||||||||||| ||||||||| ||||| | |||||||||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaatta 4097655  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||| |||||| ||| |||||||||||||||| ||||    
T  4097654 agtgtgattgaagtattatatgatcgtttatcatgttaatatgttaactttttaaaaaacatttcaaagtgtccgtaatttaaaaattaaaa 4097563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 31849113 - 31849315
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||| ||||||| |||||| |||||||| ||| ||||||||||| ||||| |||||||| ||| ||||||||||||| |||||||||||||||| ||    
T  31849113 gtgtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaa 31849212  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||||  ||  ||||||| ||||||||| ||| | ||||||| | |||| ||||| ||||||||||||||||||||| ||||||||    
T  31849213 gtgtgattgaagtattatattattgtttatcacgttaatatgttaattttttaaaagacattttatagtgtccgtaatttaaaaatgaaaagtgaaccct 31849312  T
Q  343 ccc 345  Q
    |||    
T  31849313 ccc 31849315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 143 - 333
Target Start/End: Complemental strand, 19278278 - 19278085
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||||||||||  |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaattta 19278180  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatat----gctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    || |||||||||||| ||| |||| ||||||||||||||||    |  |||| |||||||||||||| ||||| || ||||||||||||||||||    
T  19278179 gtctgattgaagtatcatatgatcgtttatcatgttaatatatatgtcaactttttaaaaaatattttatagtgtcagtaatttaaaaatgaaaa 19278085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 9719271 - 9719070
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| ||||||||  || ||| ||||||||||||| |||||||||| |||||||||||||||| |||| |||| |||||| |    
T  9719271 gtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgctttt-taaattaaattta 9719173  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| |||  |||||||  |||||||| ||||| ||||||||| ||| |||||| ||||||||||||||||||||||| || |||    
T  9719172 gtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaatcct 9719073  T
Q  343 ccc 345  Q
    |||    
T  9719072 ccc 9719070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 1390322 - 1390512
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgttt-ttctaaaataaatta 241  Q
    |||||||||||| || |||||| ||||||||  | || |||  |||||||||| |||| |||||||||||||| |||||||||| |||||||||||||||    
T  1390322 gtgtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaatta 1390421  T
Q  242 agtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    ||| |||||||| |||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||||||    
T  1390422 agtttgattgaaatattattg-atcatttatcatgttaatatgttaactttttaaaaaatatttcatagtgtcagtaatttaaaaatgaaaa 1390512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 30487546 - 30487345
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||||||| |||||| ||||||||||||||| |||  |||||||||| ||||  |||||||| ||||||||||||||||||||||| |||||||||| ||    
T  30487546 gtgtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaa 30487447  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||||||||||||||||||  ||  ||||||||||||||||| | ||| ||||||| | |||||||| | ||| |||||||| |||||||| ||||||||    
T  30487446 gtgtgattgaagtattatattattgtttatcatgttaatatgttgactttttaaaagacatttcatactgtcc-taatttaacaatgaaaagtgaaccct 30487348  T
Q  343 ccc 345  Q
    |||    
T  30487347 ccc 30487345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 33235954 - 33236143
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    |||| |||||||||| | |||||| || ||| |||  |||  ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33235954 gtgtatttggattgaggatttaggtggagaagggagtggaaagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaa 33236053  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |  ||||||||| |||||| |||  ||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  33236054 gactgattgaagaattatatgattgtttatcatgttaatatgttaactttttaaaaaa-atttcatagtgtccgtaatttaaaaatgaaaa 33236143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 143 - 367
Target Start/End: Original strand, 33041473 - 33041690
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||  |||||||||| |||| ||| |||||  |||| |||||||||||||||||  ||||||||||  ||||||| |||||||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaa 33041572  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||| ||        |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||| || | |    
T  33041573 gtgtgattgaagtgtt--------atttatcatgttaatatgttaactttttaaaaaacatttcatagtatccgtaatttaaaaataaaaaataaatctt 33041664  T
Q  343 -ccctcctaaaccgtccatccaaaca 367  Q
     |||||||||||  ||||||||||||    
T  33041665 cccctcctaaactttccatccaaaca 33041690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 143 - 345
Target Start/End: Complemental strand, 9721378 - 9721177
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| ||||| |||||| || || ||  || ||| ||||||||||||| |||||||||| ||||| ||||||||||||||| |||| |||| | |    
T  9721378 gtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgttttt-taaattaaagtta 9721280  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| |||  |||||||  |||||||| ||||| ||||||||| ||| |||||| ||||||||||||||||||||||| ||||||    
T  9721279 gtgtgattgaagtattatatgattgtttatcaaattaatatgttaactttttaaaaaacattccatagtgtccgtaatttaaaaatgaaaaataaaccct 9721180  T
Q  343 ccc 345  Q
    |||    
T  9721179 ccc 9721177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 34176397 - 34176528
Alignment:
Q  202 aaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaat 301  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||||| ||||| |  |||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattatacgatcgtttattatgttaatatgttaactttaaaaaaaat 34176496  T
Q  302 atttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||||||| |||||||||||||||||||||    
T  34176497 atttcatagtgtccgtaatttaaaaatgaaaa 34176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 345
Target Start/End: Original strand, 10818232 - 10818421
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||  ||||| ||||| |||||||||||||||| ||||||||||||||             ||    
T  10818232 gtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtttt-------------aa 10818318  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
     |||||||||||||||||| |||||||||||||||||||||| |||   ||||||||| |||||||||| ||||||||||||||||||||| | ||||||    
T  10818319 atgtgattgaagtattatatgatcatttatcatgttaatatgttaatattttaaaaaacatttcatagtgtccgtaatttaaaaatgaaaagtaaaccct 10818418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 179 - 345
Target Start/End: Original strand, 1300658 - 1300825
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaa-ataaattaagtgtgattgaagtattataggatcatttatcatgt 277  Q
    ||||||||||| |||   ||||||||||||||| |||||||||| ||||| | || |||||||||||||||||||||||||||| |||  ||||||| ||    
T  1300658 gggagggtttactttatgtttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattatatgattgtttatcaggt 1300757  T
Q  278 taatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||||| ||||| |||| ||||||||||||| | ||||||||||||||||||||| | |||||||||    
T  1300758 taatatgttaactttttataaaatatttcatattgtccgtaatttaaaaatgaaaagtaaaccctccc 1300825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 200 - 334
Target Start/End: Complemental strand, 5585486 - 5585352
Alignment:
Q  200 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||| ||||| ||||||||||| || || ||||||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatattgtataatcgtttattatgttaatatgttacctttttaaaaa 5585387  T
Q  300 atatttcatagtatccgtaatttaaaaatgaaaaa 334  Q
    | |||||||||| | ||||||||||||| ||||||    
T  5585386 acatttcatagtgttcgtaatttaaaaaagaaaaa 5585352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 332
Target Start/End: Complemental strand, 10348986 - 10348850
Alignment:
Q  197 tttttaaattacggactatataacatgtttttct-aaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttta 295  Q
    |||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||||||||||||  ||| |||||| | |||||||| ||||| ||||    
T  10348986 tttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattatattatcgtttatcgtattaatatgttaacttttta 10348887  T
Q  296 aaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
    ||| |||||||||| ||||||||||||||||||||||    
T  10348886 aaagatatttcatattatccgtaatttaaaaatgaaa 10348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 333
Target Start/End: Complemental strand, 16738233 - 16738047
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtg 245  Q
    |||||||||||| ||||||||| ||||| ||| ||||| ||||| ||||| |||||||||||| || ||||||| |||||||||||||||||| ||||||    
T  16738233 tgtttggattgagggtttaggatgggaa-ggaggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtg 16738135  T
Q  246 tgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    | ||| |||||||||| |||| | |||||||||| |||  ||| |  | |||||| |||||||||| ||| ||||||||||| |||||    
T  16738134 ttatttaagtattatatgatcgtatatcatgttattattttaatttatcaaaaaacatttcatagtttccataatttaaaaacgaaaa 16738047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 198 - 311
Target Start/End: Original strand, 13583777 - 13583890
Alignment:
Q  198 ttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaa 297  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| ||| ||| | ||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattatatgatcatttattatgttaacatgttaattttttaaa 13583876  T
Q  298 aaatatttcatagt 311  Q
    ||| ||||||||||    
T  13583877 aaacatttcatagt 13583890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 141 - 332
Target Start/End: Complemental strand, 30850155 - 30849966
Alignment:
Q  141 ttgtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaatt 240  Q
    ||||||||||||||||| |||||||||||| ||  |||||||| ||||| ||||   |||||||||| | | ||||||| |||||||| ||||| |||||    
T  30850155 ttgtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaatt 30850056  T
Q  241 aagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaa 332  Q
     ||| | |||||||||||||| |||| |||||||||||| |||  |||   |||||||||||||| ||||||| ||||||||||||| ||||    
T  30850055 tagtataattgaagtattatatgatcgtttatcatgttattattttaa--ttttaaaaaatattttatagtatgcgtaatttaaaaacgaaa 30849966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 324
Target Start/End: Complemental strand, 2892844 - 2892664
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| || || ||||| | ||| ||| ||| |||||  |||| ||||| |||||||| |||||||||||||||| |||||||||||||||||| |    
T  2892844 gtgtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaattta 2892745  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaa 324  Q
    ||||||||||| ||||||| |||  |||||||||||| |||  ||| | |||||||||||| ||||||| | ||||||||||    
T  2892744 gtgtgattgaaatattatatgattgtttatcatgttattattttaa-tttttaaaaaatatctcatagtgtgcgtaatttaa 2892664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 2893633 - 2893751
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||| ||| |||||  ||  |||| ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  2893633 gtgtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaa 2893732  T
Q  243 gtgtgattgaagtattata 261  Q
    |||||||||| ||||||||    
T  2893733 gtgtgattgatgtattata 2893751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 12811221 - 12811108
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||| |||||  || ||||||| ||| ||||| | |||||||||  |||||||||| ||||||||||||||||||||||    
T  12811221 gtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaattaa 12811122  T
Q  243 gtgtgattgaagta 256  Q
    ||||||||||||||    
T  12811121 gtgtgattgaagta 12811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 345
Target Start/End: Complemental strand, 666051 - 665879
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggactatataacatgtttttc------taaaataaattaagtgtgattgaagtattataggatcatttatc 273  Q
    |||| ||||| ||||| |||||||| ||| ||||||| ||||||||||        ||||| |||||||||||| |||||||||||||  ||||||||||    
T  666051 ggagagtttatttttcttttttaaactacagactatacaacatgttttataaaaaataaaaaaaattaagtgtggttgaagtattatatcatcatttatc 665952  T
Q  274 atgttaatatgct-aactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    ||||||||||| | || | ||||||| | |||||||| ||| | |||||||||||||||||||||||||||||    
T  665951 atgttaatatgttaaaatttttaaaagacatttcataatattcataatttaaaaatgaaaaatgaaccctccc 665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 196 - 333
Target Start/End: Original strand, 1395691 - 1395829
Alignment:
Q  196 atttttaaattacggactatataacatgtttttc-taaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactcttt 294  Q
    |||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||| || || | |||||||||||||| ||||||| ||| | |||    
T  1395691 attttttaattacggactatgtaacatgttttttataaaataaattaagtgtgattgaaataatacatgatcatttatcatgctaatatgttaatttttt 1395790  T
Q  295 aaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||||| |||  | ||| |  ||||||||||||||||||    
T  1395791 aaaaaacattctacagtgttagtaatttaaaaatgaaaa 1395829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 6034302 - 6034201
Alignment:
Q  154 ttgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaa 253  Q
    |||| ||||| |||||| || ||||  |||| |||| ||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||    
T  6034302 ttgagggtttcggagggaaagggaaaagaggatttacttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaa 6034203  T
Q  254 gt 255  Q
    ||    
T  6034202 gt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 9721141 - 9721210
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  9721141 gtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggac 9721210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 327
Target Start/End: Complemental strand, 2893050 - 2892900
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggactatataacatgt-ttttctaaaataaattaa--gtgtgattgaagtattataggatcatttatcatg 276  Q
    |||||||||| ||||| ||||||||||||| ||||||||| || | |||| | ||||||||| |  ||||||||||||||||||| |||| |||||||||    
T  2893050 ggagggtttacttttcttttttaaattacgaactatataaaatatatttttttaaataaatttatagtgtgattgaagtattatatgatcgtttatcatg 2892951  T
Q  277 ttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaa 327  Q
    ||| |||  ||  |  ||| ||||||||||||||| | |||||||||||||    
T  2892950 ttattattttactttcttacaaaatatttcatagtgtgcgtaatttaaaaa 2892900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 25741476 - 25741566
Alignment:
Q  209 ggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa 299  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||| ||||| |||| |||||||| ||| |||| ||||| ||||||||    
T  25741476 ggactatataacatgtttttttaaaataaattaagcgtgactgaagttttatatgatcgtttatcatattattatgttaactttttaaaaa 25741566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 364
Target Start/End: Original strand, 2900017 - 2900134
Alignment:
Q  247 gattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccct 346  Q
    |||||| |||||||| |||  ||||||||||||||||| |||||  ||| |||| |||||||||| ||  ||||||||||||||||| | ||||  ||||    
T  2900017 gattgatgtattatatgattgtttatcatgttaatatgttaacttcttataaaacatttcatagtgtctataatttaaaaatgaaaagtaaacctcccct 2900116  T
Q  347 cctaaaccgtccatccaa 364  Q
    |||||||| |||||||||    
T  2900117 cctaaaccctccatccaa 2900134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 9719034 - 9719103
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||||||| ||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggac 9719103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 14548793 - 14548711
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||||| |||||| ||||| || ||||||||||||| ||||||||||  |||||| |||||||||| ||||||    
T  14548793 tttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattgaaccattatatgatcatttataatgtta 14548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 23090998 - 23091116
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||| | | ||||   |||||||||||| || || ||| |||| ||| |||| ||||||||    
T  23090998 gtgtgtttggattgaaggtttaggaggggaagggaggggagggctcacttttatcttttaaattacgaacaatctaaaatgtatttttaaactaaattaa 23091097  T
Q  243 gtgtgattgaagtattata 261  Q
    ||||  |||||||||||||    
T  23091098 gtgtttttgaagtattata 23091116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 26318345 - 26318443
Alignment:
Q  180 ggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||||| | ||||  ||||||||||||| |  |||||| |||||||| |||||||||||||||||  ||||||||||||| ||||| ||||||||||    
T  26318345 ggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattatatgatcaattatcatgtt 26318443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 10818457 - 10818388
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||||||  |||||||||||| | ||| ||||||||||| ||||||||||||||||||||||    
T  10818457 gtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggac 10818388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 15323228 - 15323363
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| | ||| | | | ||||  ||||||||||||| || || ||| || | ||| |||||||||||||    
T  15323228 gtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatatatttttaaaataaattaa 15323327  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||   ||| |||||||| |||||||| |||||||    
T  15323328 gtgtttctgatgtattatatgatcatttgtcatgtt 15323363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 15353367 - 15353501
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| ||||||||||||||| ||| | ||| | | | ||||  ||||||||||||| || || ||| |||||||| | ||||||| |||    
T  15353367 gtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataaa-taa 15353465  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  |||| |||||||| |||||||||| |||||    
T  15353466 gtgtttttgatgtattatatgatcatttataatgtt 15353501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 32926737 - 32926784
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  32926737 aaataaattaagtgtgattgaagtattatatgatcatttatcatgtta 32926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 14515712 - 14515648
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    |||||||||||| || ||||||||||||||| | |||||||||||||  ||||||||||||||||    
T  14515712 gtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaatta 14515648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 1300861 - 1300787
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatat 217  Q
    |||||||||||| || ||||| | ||  ||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  1300861 gtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatat 1300787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 298
Target Start/End: Complemental strand, 29490621 - 29490481
Alignment:
Q  159 ggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttct--aaaataaattaagtgtgattgaagta 256  Q
    ||||||||||||||| |||  ||||  |||| ||||  |||||||||||| ||| || |||||||||||| |  ||||| ||||||| |||||| |||||    
T  29490621 ggtttaggaggggaaaggagaggagaatttatttttattttttaaattac-gacaatctaacatgtttttttaaaaaatcaattaagcgtgatttaagta 29490523  T
Q  257 ttataggatcatttatcatgttaatatgctaactctttaaaa 298  Q
    ||||| |||  |||||| |||||||| | ||||| |||||||    
T  29490522 ttatatgatattttatcttgttaatacgttaactttttaaaa 29490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 7776045 - 7775962
Alignment:
Q  286 taactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct--ccctcctaaaccgtccatccaaaca 367  Q
    ||||| |||||||||||||| ||||| | |||||||| |||||||||| |||| |||  |||||| ||||| ||||||||||||    
T  7776045 taactttttaaaaaatattttatagtgttcgtaattttaaaatgaaaagtgaaaccttcccctccaaaaccctccatccaaaca 7775962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 278
Target Start/End: Complemental strand, 9051773 - 9051640
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||| |||||||| ||| |||| | |   | ||| |||||||||||||| || || ||| || ||||| | |||||||||||    
T  9051773 gtgtgtttggattgagggtttaagaggggaagggaggggatgctc--acttttatttttaaattacgaacaatgtaaaatattttttttaaataaattaa 9051676  T
Q  243 gtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||  || |||||  ||| ||||||||||||||||    
T  9051675 gtgtttttaaagtagcatatgatcatttatcatgtt 9051640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 25468565 - 25468509
Alignment:
Q  218 aacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatca 274  Q
    ||||||||||| |||||||||||||||||  |||||||||||||  |||||||||||    
T  25468565 aacatgtttttttaaaataaattaagtgtttttgaagtattatataatcatttatca 25468509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 30487309 - 30487373
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||| | |||||||| ||||||||    
T  30487309 gtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatta 30487373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 299
Target Start/End: Original strand, 25747403 - 25747493
Alignment:
Q  210 gactatataacatgtttttct-aaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaa 299  Q
    ||||||||||||||||||| | ||||| ||||||  |||| |||||| ||||| |||| |||||||||||| |||  ||||| ||||||||    
T  25747403 gactatataacatgttttttttaaaatcaattaaacgtgactgaagttttatatgatcgtttatcatgttattatattaactttttaaaaa 25747493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 1390560 - 1390495
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    ||||||||||||  | ||||||||||||||||||| | | || |||| ||||||||||||||||||    
T  1390560 gtgtgtttggatgaagggtttaggaggggaatggaggaggggttttacttttcatttttaaattac 1390495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 17155446 - 17155495
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    |||||| |||||||||||||| |||||||||| ||||| |||||||||||    
T  17155446 taaaatcaattaagtgtgatttaagtattatatgatcagttatcatgtta 17155495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 665844 - 665907
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    |||||||||||| || |||||||||||||||  || ||||||||| | |||||||||||||||||    
T  665844 gtgtgtttggat-gagggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 208
Target Start/End: Original strand, 19278039 - 19278102
Alignment:
Q  145 gtgtttggattgatggtttaggaggggaatggaagg-gagggtttaattttcatttttaaattac 208  Q
    |||||||||| || ||||||||||||||| |||||| ||| ||||| ||||||||||||||||||    
T  19278039 gtgtttggatggagggtttaggaggggaa-ggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 3841169 - 3841220
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||| |||||||||||||||||  |||||||||||||  ||||||||||||    
T  3841169 tttttttaaaataaattaagtgtttttgaagtattatatcatcatttatcat 3841220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 16509322 - 16509408
Alignment:
Q  181 gagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcat 268  Q
    ||||| ||| ||||| ||||| |||||  |||  ||||| ||||||||  ||||||||| ||||||||||||||||||||| ||||||    
T  16509322 gagggcttacttttcttttttgaattaaagacactataaaatgttttta-aaaataaatcaagtgtgattgaagtattatatgatcat 16509408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 170 - 269
Target Start/End: Complemental strand, 29020046 - 29019948
Alignment:
Q  170 ggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatt 269  Q
    |||| ||||||||||  |||||||||||||||| | || ||||  ||||| |||||||||| |||| ||||| ||||||||||  | ||||| |||||||    
T  29020046 ggaagggaagggaggacttaattttcatttttataataaggacattataaaatgtttttct-aaatcaattatgtgtgattgagcttttatatgatcatt 29019948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 32922437 - 32922484
Alignment:
Q  232 aaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||| |||||||||||| ||||||||||| ||| |||||||||||||    
T  32922437 aaatatattaagtgtgatcgaagtattatatgattatttatcatgtta 32922484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 5381343 - 5381306
Alignment:
Q  224 tttttctaaaataaattaagtgtgattgaagtattata 261  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  5381343 tttttttaaaataaattaagcgtgattgaagtattata 5381306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 5526897 - 5526849
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||||||  ||| ||||| ||||||| |||||||||||||||||    
T  5526897 aaaataaattaaaagtgcttgaattattatatgatcatttatcatgtta 5526849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 9051541 - 9051605
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||||| | |||||||||| |||||| | || |||||| ||||  |||||||||||||||    
T  9051541 gtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacgga 9051605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 14368046 - 14368094
Alignment:
Q  230 taaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    |||||| ||||||||||| | ||||||||||| |||||||||| |||||    
T  14368046 taaaatcaattaagtgtggtcgaagtattatatgatcatttattatgtt 14368094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Original strand, 21606883 - 21606915
Alignment:
Q  179 gggagggtttaattttcatttttaaattacgga 211  Q
    ||||||||||| |||||||||||||||||||||    
T  21606883 gggagggtttacttttcatttttaaattacgga 21606915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 23091195 - 23091131
Alignment:
Q  148 tttggattgatggtttaggaggggaatggaagggagggtttaattttc-atttttaaattacgga 211  Q
    ||||||| || ||||||||||||||| ||| ||||||| ||| |||||  |||||||||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacgga 23091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 143 - 365
Target Start/End: Original strand, 6587 - 6809
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| | ||||||||| ||| ||| ||||||||||| ||||| |||||||||||| ||||||||||| |||| |||||||||||||| |    
T  6587 gtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaattta 6686  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    ||||||||||||||||||| |||| ||||| ||||||||||  ||| | ||| |||||||||||||||| | ||||||||||||| ||||| | | ||||    
T  6687 gtgtgattgaagtattatatgatcgtttat-atgttaatattttaatttttttaaaaatatttcatagtgtgcgtaatttaaaaacgaaaagtaagccct 6785  T
Q  343 -ccctcctaaaccgtccatccaaa 365  Q
     |||||||||| | ||||||||||    
T  6786 cccctcctaaatcctccatccaaa 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 179 - 345
Target Start/End: Complemental strand, 16501 - 16335
Alignment:
Q  179 gggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||| ||||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  16501 gggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattatatgattgtttatcatgtt 16402  T
Q  279 aatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccctccc 345  Q
    |||||| ||||  |||| |||| |||||||||| | | ||||||||||||||||| | |||||||||    
T  16401 aatatgttaacgttttataaaacatttcatagtgttcataatttaaaaatgaaaagtaaaccctccc 16335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 16302 - 16363
Alignment:
Q  146 tgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaatta 207  Q
    ||||||||| || |||||||||||| || ||| ||||||||||| |||||||||||||||||    
T  16302 tgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaatta 16363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 185 - 335
Target Start/End: Original strand, 15995 - 16145
Alignment:
Q  185 gtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatg 284  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||| ||  ||  ||| |||| ||||||||    
T  15995 gtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtattttataattgtttttcatattaatatg 16094  T
Q  285 ctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaat 335  Q
     ||||| ||||||||| |||||||| |||||||||||||||||||||||||    
T  16095 ttaactttttaaaaaacatttcataatatccgtaatttaaaaatgaaaaat 16145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 143 - 333
Target Start/End: Original strand, 1175 - 1365
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||||||||| |||||||||||||||  || ||||| ||||| ||||| ||||||||||||||||||| ||||||||| |||||||||    |||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat----taa 1270  T
Q  243 gtgtgattgaagtattatag----gatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    || ||| ||||||||||||     |||| |||||||||  |||||| ||||| ||||||||| |||||||||| | | |||||||||||||||||    
T  1271 gtatgactgaagtattatatatatgatcgtttatcatgacaatatgttaactttttaaaaaacatttcatagtgttcataatttaaaaatgaaaa 1365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 143 - 274
Target Start/End: Complemental strand, 1639 - 1507
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttc-taaaataaatta 241  Q
    ||||||||| ||||| |||||||||| |||||||| ||||||| | | ||||  ||||||||||||| || || ||| ||||||||| | ||||||||||    
T  1639 gtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttctttaaataaatta 1540  T
Q  242 agtgtgattgaagtattataggatcatttatca 274  Q
    ||| |  || |||||||||| ||||||||||||    
T  1539 agtattttttaagtattatatgatcatttatca 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 143 - 343
Target Start/End: Original strand, 18774 - 18972
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaa 242  Q
    ||||||||| |||||  |||| ||||  |||| ||  |||||||||| ||||| ||||||||| || ||||||||||||||| ||||||||||||||||     
T  18774 gtgtgtttgaattgagagtttcggagaagaattgagaggagggttta-ttttcttttttaaatgacagactatataacatgtctttctaaaataaattat 18872  T
Q  243 gtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaaaaaatatttcatagtatccgtaatttaaaaatgaaaaatgaaccct 342  Q
    |||| |||||| ||||||| |||| ||||||||||||||||  |||||  |||||||||| |||||||| |||   ||||||||||||||| | ||||||    
T  18873 gtgtcattgaattattatatgatc-tttatcatgttaatatattaacttcttaaaaaatagttcatagtgtcctcgatttaaaaatgaaaagtaaaccct 18971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 15320 - 15455
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgttaatatgctaactctttaa 296  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||||| |||  ||||||| ||||||||| | ||  |||||    
T  15320 tttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattatatgattgtttatcacgttaatatgttgaccttttaa 15419  T
Q  297 aaaatatttcatagtatccgtaatttaaaaatgaaaa 333  Q
    |||| | |||||||| |||||||||||||||| ||||    
T  15420 aaaaca-ttcatagtgtccgtaatttaaaaataaaaa 15455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 15503 - 15434
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    |||||||||||| || ||||||||| ||||| ||||  |||| | || |||| |||||||||||||||||    
T  15503 gtgtgtttggatggagggtttaggaagggaagggaaatgaggatctactttttatttttaaattacggac 15434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 242456 - 242388
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||| |||||||||  ||||||| ||| ||||||||||| ||||| ||||||||||||||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggac 242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 37390 - 37521
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatgtttttctaaaataaattaagtgt 246  Q
    ||||| ||||| | |||||||||| || | | ||||||| | | ||||  ||||||||||||| || || ||| |||||||| |||||||||| ||||||    
T  37390 gtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatcaagtgt 37489  T
Q  247 gattgaagtattataggatcatttatcatgtt 278  Q
      ||||||| ||||| ||||| ||||||||||    
T  37490 ttttgaagtgttatatgatcacttatcatgtt 37521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 30722 - 30843
Alignment:
Q  147 gtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggactatataacatg-tttttctaaaataaattaagtg 245  Q
    ||||||||||| | |||||||||  || ||| ||||||| | | ||||  ||||||||||||| || || ||| ||| ||||| | ||||||||||||||    
T  30722 gtttggattgaggatttaggaggacaagggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttttaaataaattaagtg 30821  T
Q  246 tgattgaagtattataggatca 267  Q
    |  ||||||| ||||| |||||    
T  30822 tttttgaagtgttatatgatca 30843  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 213 - 275
Target Start/End: Complemental strand, 69378 - 69316
Alignment:
Q  213 tatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcat 275  Q
    ||||||| |||||||| |||||||||||||| ||||  ||||||||||| |||||||||||||    
T  69378 tatataaaatgtttttttaaaataaattaagggtgacagaagtattatatgatcatttatcat 69316  T

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Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 3150 - 3215
Alignment:
Q  143 gtgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattac 208  Q
    |||||||||||||||  |||||||||||||| ||| ||||| ||||| ||||| ||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

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Target: scaffold0012 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 184847 - 184779
Alignment:
Q  144 tgtgtttggattgatggtttaggaggggaatggaagggagggtttaattttcatttttaaattacggac 212  Q
    ||||||||||| || |||||||||||| || ||||||||||||||| | ||| ||||||||||| ||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggac 184779  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 81564 - 81516
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  81564 aaaataaatcaagtatgattgaagtattatatgatcatttatcatgtta 81516  T

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Target: scaffold0783 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0783
Description:

Target: scaffold0783; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 6063 - 6015
Alignment:
Q  231 aaaataaattaagtgtgattgaagtattataggatcatttatcatgtta 279  Q
    ||||||||| |||| ||||| |||||||||| |||||||||||||||||    
T  6063 aaaataaatcaagtatgattcaagtattatatgatcatttatcatgtta 6015  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 278
Target Start/End: Original strand, 8204 - 8285
Alignment:
Q  197 tttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattataggatcatttatcatgtt 278  Q
    ||||||||||||| || || | | |||| ||| ||| ||||||||| |||  ||||||||||||| ||||||| ||||||||    
T  8204 tttttaaattacgaacaatgtgaaatgtctttttaagataaattaactgtttttgaagtattatatgatcattaatcatgtt 8285  T

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