View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_low_28 (Length: 375)
Name: NF13926_low_28
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 3382728 - 3382425
Alignment:
| Q |
30 |
tactaataacatagagtcctctnnnnnnngagtatgaagttaatatgcaagcaatttaaggaccaaatattcaatttttaatctaaatcaaacgatataa |
129 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
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| T |
3382728 |
tactaataacatagagtcctctaaaaaaagagtatgaagttaatatgcaagcaatttaaggaccaaatattcaattt--aatctaaatcaaatgatataa |
3382631 |
T |
|
| Q |
130 |
aaatataaccgagataaaagcactacttatttgatggtgatcaagaaatgatgagattaaataatattgtttccctcgttgataatgtgaatatgacgtc |
229 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
3382630 |
aaatataaccgagataaaagcaccacttatttgatggtgatcaagaaatgatgagataaaataatattgtttccctcgttgataatgtgaatatgacgta |
3382531 |
T |
|
| Q |
230 |
catgtactattgctattctctgtgatgatttttcatatgaccatcatttttaatatctagttttttcaacgacnnnnnnngatataaatttaatatgatg |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||| |
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| T |
3382530 |
catgtactattgctattctctgtgatgatttttcatatgaccatcattttcaatgtctagttttttcaacgac-aaacatgatataaatttaatatgatg |
3382432 |
T |
|
| Q |
330 |
taactaa |
336 |
Q |
| |
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||||||| |
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| T |
3382431 |
taactaa |
3382425 |
T |
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