View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_low_39 (Length: 332)
Name: NF13926_low_39
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 24989054 - 24988756
Alignment:
| Q |
19 |
gaaataccctcaagaagggattgcaggggtttttgacattgacaacaatagtaacacttacttgtgctcttctaatataagcagattacctaacttggta |
118 |
Q |
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| T |
24989054 |
gaaataccctcaagaagggattgcaggggtttttgacattgacaacaacagtaacacttacttgtgctcttctaatataagcagattacctaacttggta |
24988955 |
T |
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| Q |
119 |
tcatcggaagagaggccattgcctatgtatcatggaactatgcaatccctatggaatggcccttccaacatttctaactgattacttttgttacctcttt |
218 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
24988954 |
tcatcggaagagaggccgttgcctatgtatcatggaactatgcaatccctatggaatggcccttccaacatttctaactgattacttttgttacc----t |
24988859 |
T |
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| Q |
219 |
tcttttttctgttgaaaaacatagttgagaactttgatagaaaatcgctacattcaaataagtgttaagatgtgcatcctttccttgcactgtgaccttc |
318 |
Q |
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| T |
24988858 |
ttttttttctgttgaaaaacatagttgagaactttgatagaaaatcgctacattcaaataagtgt---gatgtgcatcc-ttccttgcactgtgaccttc |
24988763 |
T |
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