View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13926_low_48 (Length: 257)
Name: NF13926_low_48
Description: NF13926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13926_low_48 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 34244093 - 34243857
Alignment:
| Q |
5 |
ctataaacatatcaggcctgattttagatcaaaacaaatccacacaatgatgttcttatttcctttcccttagccgcattacattttccataactctagc |
104 |
Q |
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| T |
34244093 |
ctataaacatatcaggcctgattttagatcaaaacaaatccacacaatgatgttcttatttcctttcccttagccgcattacattttccataactctagc |
34243994 |
T |
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| Q |
105 |
gccctgcgtttcaggaagcaacctcaccagttttggtgacatctccaacatgagattttaaggcacaacgcaactttatgtaattaaaaccttaaactaa |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
34243993 |
gccctgcgtttcaggaagcaacctcaccagttttggtgacatctccaacatgagattttaaggcacaacgcaacattatgtaattaaaaccttaaactaa |
34243894 |
T |
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| Q |
205 |
taaatttttgagataaacctatgtcatttatagattg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
34243893 |
taaatttttgagataaacctatgtcatttatagattg |
34243857 |
T |
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