View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1392_low_5 (Length: 448)

Name: NF1392_low_5
Description: NF1392
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1392_low_5
NF1392_low_5
[»] chr2 (35 HSPs)
chr2 (18-399)||(34993832-34994212)
chr2 (216-303)||(12224250-12224337)
chr2 (215-300)||(5040760-5040845)
chr2 (215-303)||(2438664-2438752)
chr2 (215-303)||(28596495-28596583)
chr2 (215-282)||(37411210-37411277)
chr2 (172-308)||(37558954-37559096)
chr2 (215-289)||(5367218-5367292)
chr2 (234-308)||(24009340-24009414)
chr2 (238-308)||(26769571-26769641)
chr2 (215-310)||(20242665-20242760)
chr2 (237-308)||(30717459-30717530)
chr2 (215-284)||(18570998-18571067)
chr2 (215-308)||(18840953-18841046)
chr2 (215-304)||(29176437-29176526)
chr2 (175-284)||(31808057-31808172)
chr2 (237-309)||(37419802-37419874)
chr2 (258-308)||(15909570-15909620)
chr2 (219-309)||(15972903-15972993)
chr2 (196-278)||(28677910-28678003)
chr2 (226-308)||(38117099-38117181)
chr2 (237-303)||(44860379-44860445)
chr2 (238-295)||(19942314-19942371)
chr2 (49-106)||(34985703-34985760)
chr2 (237-308)||(32749754-32749825)
chr2 (237-308)||(35056927-35056998)
chr2 (216-301)||(21624294-21624374)
chr2 (175-254)||(31018570-31018655)
chr2 (217-254)||(31855802-31855839)
chr2 (217-254)||(34691799-34691836)
chr2 (217-254)||(34714211-34714248)
chr2 (243-308)||(42511322-42511387)
chr2 (163-215)||(34221536-34221588)
chr2 (214-246)||(44605141-44605173)
chr2 (216-248)||(44860347-44860379)
[»] chr5 (32 HSPs)
chr5 (182-308)||(21576685-21576817)
chr5 (218-303)||(30502333-30502418)
chr5 (218-303)||(30542676-30542761)
chr5 (216-303)||(30098983-30099070)
chr5 (233-303)||(39268543-39268613)
chr5 (215-309)||(43564907-43565001)
chr5 (217-295)||(32630688-32630766)
chr5 (215-303)||(21191001-21191089)
chr5 (163-284)||(42893328-42893455)
chr5 (215-311)||(27932261-27932357)
chr5 (181-300)||(31084309-31084439)
chr5 (237-308)||(39698600-39698671)
chr5 (215-295)||(23015937-23016022)
chr5 (237-301)||(21522809-21522873)
chr5 (237-301)||(21533375-21533439)
chr5 (237-301)||(21542089-21542153)
chr5 (176-308)||(17123029-17123166)
chr5 (237-308)||(21814320-21814391)
chr5 (215-253)||(17925167-17925205)
chr5 (215-257)||(42029778-42029820)
chr5 (215-308)||(21194063-21194156)
chr5 (218-295)||(26312798-26312875)
chr5 (250-295)||(30183621-30183666)
chr5 (215-303)||(4105285-4105373)
chr5 (217-276)||(23012380-23012439)
chr5 (237-295)||(15382533-15382591)
chr5 (215-257)||(28588665-28588707)
chr5 (224-253)||(15874197-15874226)
chr5 (214-255)||(18145296-18145337)
chr5 (215-248)||(18592099-18592132)
chr5 (242-295)||(36642705-36642757)
chr5 (215-275)||(18421814-18421874)
[»] chr6 (53 HSPs)
chr6 (174-308)||(28152078-28152217)
chr6 (172-303)||(17841534-17841671)
chr6 (215-309)||(28715321-28715415)
chr6 (215-284)||(7378005-7378074)
chr6 (215-309)||(33001228-33001322)
chr6 (215-308)||(34595160-34595253)
chr6 (175-308)||(7977770-7977909)
chr6 (215-303)||(32978844-32978932)
chr6 (175-303)||(9658859-9658994)
chr6 (161-303)||(7265538-7265686)
chr6 (237-309)||(8365447-8365519)
chr6 (237-309)||(10339053-10339125)
chr6 (214-289)||(12690441-12690516)
chr6 (249-295)||(21044827-21044873)
chr6 (215-308)||(13360313-13360405)
chr6 (219-263)||(30851630-30851674)
chr6 (237-308)||(3209447-3209518)
chr6 (237-308)||(16488519-16488590)
chr6 (252-295)||(21068085-21068128)
chr6 (215-309)||(4877969-4878062)
chr6 (175-213)||(13689533-13689571)
chr6 (226-308)||(13789191-13789273)
chr6 (226-308)||(13797810-13797892)
chr6 (243-309)||(17327589-17327655)
chr6 (217-303)||(7996327-7996409)
chr6 (217-303)||(8022392-8022474)
chr6 (215-248)||(9617460-9617493)
chr6 (215-248)||(9629409-9629442)
chr6 (181-243)||(30866149-30866217)
chr6 (250-303)||(31384991-31385044)
chr6 (215-295)||(853812-853892)
chr6 (237-309)||(18367895-18367967)
chr6 (237-308)||(7248417-7248488)
chr6 (237-308)||(9107299-9107370)
chr6 (237-284)||(16766756-16766803)
chr6 (215-309)||(6898220-6898314)
chr6 (215-249)||(7027268-7027302)
chr6 (259-301)||(7930371-7930413)
chr6 (175-308)||(9027158-9027286)
chr6 (215-257)||(19040378-19040420)
chr6 (173-252)||(20371106-20371191)
chr6 (221-283)||(23771610-23771672)
chr6 (246-304)||(25096491-25096549)
chr6 (253-303)||(31959214-31959264)
chr6 (259-308)||(7625186-7625235)
chr6 (215-248)||(9025494-9025527)
chr6 (236-269)||(11424679-11424712)
chr6 (259-308)||(25207810-25207859)
chr6 (216-248)||(10294134-10294166)
chr6 (214-309)||(12236683-12236779)
chr6 (217-253)||(21924930-21924966)
chr6 (215-303)||(32298552-32298640)
chr6 (237-308)||(34446618-34446690)
[»] chr3 (34 HSPs)
chr3 (215-309)||(40993274-40993368)
chr3 (215-308)||(35222964-35223057)
chr3 (175-308)||(55401055-55401194)
chr3 (215-295)||(28918027-28918109)
chr3 (215-293)||(10954978-10955056)
chr3 (226-308)||(13845465-13845547)
chr3 (215-308)||(20503491-20503584)
chr3 (215-303)||(25775535-25775621)
chr3 (237-309)||(41961578-41961650)
chr3 (217-308)||(4466540-4466631)
chr3 (215-301)||(3631710-3631796)
chr3 (217-295)||(7171529-7171607)
chr3 (218-286)||(24633363-24633431)
chr3 (244-308)||(34185052-34185116)
chr3 (190-254)||(7928445-7928515)
chr3 (215-303)||(8789493-8789583)
chr3 (250-301)||(15999957-16000008)
chr3 (237-295)||(4987233-4987291)
chr3 (259-309)||(40052382-40052432)
chr3 (215-284)||(18426975-18427044)
chr3 (215-303)||(24204986-24205074)
chr3 (259-308)||(25074865-25074914)
chr3 (217-253)||(13414497-13414533)
chr3 (237-285)||(14832158-14832206)
chr3 (219-271)||(25093532-25093584)
chr3 (226-305)||(2941595-2941674)
chr3 (237-308)||(15796223-15796294)
chr3 (250-308)||(27505312-27505370)
chr3 (259-308)||(21211364-21211413)
chr3 (256-308)||(10455863-10455915)
chr3 (237-309)||(14209172-14209244)
chr3 (243-303)||(14216957-14217017)
chr3 (243-303)||(14223086-14223146)
chr3 (217-253)||(21419450-21419486)
[»] chr1 (53 HSPs)
chr1 (219-309)||(37598861-37598951)
chr1 (181-309)||(5898205-5898339)
chr1 (215-309)||(51410051-51410145)
chr1 (215-308)||(18337355-18337448)
chr1 (215-303)||(29163326-29163414)
chr1 (236-308)||(32461393-32461465)
chr1 (219-303)||(42359394-42359478)
chr1 (215-294)||(40181897-40181976)
chr1 (214-308)||(34712323-34712417)
chr1 (215-308)||(38078601-38078694)
chr1 (217-308)||(52903277-52903365)
chr1 (215-303)||(12918971-12919059)
chr1 (172-308)||(46348323-46348465)
chr1 (180-295)||(2896074-2896195)
chr1 (217-295)||(8842667-8842745)
chr1 (215-295)||(1486657-1486742)
chr1 (215-284)||(1815283-1815352)
chr1 (226-303)||(10577680-10577757)
chr1 (215-308)||(22515827-22515920)
chr1 (215-308)||(30749866-30749959)
chr1 (215-308)||(30771317-30771410)
chr1 (237-309)||(25934675-25934747)
chr1 (215-295)||(40258886-40258966)
chr1 (237-309)||(40917808-40917880)
chr1 (180-248)||(6427335-6427409)
chr1 (237-295)||(6612113-6612171)
chr1 (215-284)||(7353456-7353526)
chr1 (215-308)||(38075909-38076003)
chr1 (217-295)||(39130720-39130798)
chr1 (215-303)||(11412712-11412801)
chr1 (242-303)||(16297226-16297287)
chr1 (237-309)||(9828103-9828175)
chr1 (215-295)||(18190061-18190141)
chr1 (214-281)||(39410667-39410735)
chr1 (259-303)||(48040419-48040463)
chr1 (219-309)||(9690212-9690303)
chr1 (178-213)||(40285695-40285730)
chr1 (237-308)||(47989556-47989627)
chr1 (245-311)||(6427531-6427597)
chr1 (215-293)||(19637794-19637872)
chr1 (237-295)||(21032265-21032323)
chr1 (228-278)||(21530728-21530778)
chr1 (215-284)||(30847683-30847753)
chr1 (259-309)||(46940747-46940797)
chr1 (263-308)||(6574051-6574096)
chr1 (215-284)||(28674826-28674895)
chr1 (155-215)||(31672934-31672995)
chr1 (215-248)||(34371739-34371772)
chr1 (215-248)||(44482256-44482289)
chr1 (260-308)||(5944365-5944413)
chr1 (253-309)||(15765822-15765878)
chr1 (237-284)||(17831486-17831534)
chr1 (215-303)||(26830614-26830701)
[»] chr7 (35 HSPs)
chr7 (215-310)||(15680835-15680930)
chr7 (182-303)||(20549778-20549905)
chr7 (215-303)||(32287408-32287496)
chr7 (175-308)||(598188-598327)
chr7 (238-309)||(7438766-7438837)
chr7 (214-308)||(5835272-5835366)
chr7 (215-308)||(21880178-21880271)
chr7 (175-308)||(24105658-24105797)
chr7 (217-308)||(21864836-21864927)
chr7 (176-308)||(25481883-25482021)
chr7 (243-309)||(5409770-5409836)
chr7 (243-309)||(9778559-9778625)
chr7 (215-309)||(33994238-33994332)
chr7 (215-284)||(27093377-27093446)
chr7 (215-284)||(27184855-27184924)
chr7 (237-308)||(24339701-24339772)
chr7 (196-308)||(42720830-42720948)
chr7 (243-308)||(32093954-32094020)
chr7 (215-308)||(18212973-18213066)
chr7 (218-258)||(26022539-26022579)
chr7 (215-303)||(27732189-27732272)
chr7 (226-308)||(1433491-1433578)
chr7 (230-308)||(5307297-5307375)
chr7 (214-284)||(8234171-8234241)
chr7 (215-281)||(39138470-39138536)
chr7 (250-308)||(43027404-43027462)
chr7 (215-248)||(22602710-22602743)
chr7 (215-284)||(26733330-26733399)
chr7 (215-247)||(640139-640171)
chr7 (217-245)||(3520345-3520373)
chr7 (215-295)||(3554459-3554539)
chr7 (218-274)||(7197271-7197327)
chr7 (237-309)||(8160475-8160547)
chr7 (215-247)||(24146842-24146874)
chr7 (259-303)||(43250074-43250118)
[»] chr4 (37 HSPs)
chr4 (226-308)||(12895214-12895296)
chr4 (215-308)||(23292926-23293019)
chr4 (215-308)||(49431052-49431145)
chr4 (215-284)||(8423682-8423751)
chr4 (215-308)||(28964188-28964281)
chr4 (237-309)||(19482727-19482799)
chr4 (250-308)||(29205529-29205587)
chr4 (237-303)||(30982812-30982878)
chr4 (226-308)||(34306744-34306826)
chr4 (216-309)||(16073421-16073514)
chr4 (215-308)||(715545-715640)
chr4 (215-308)||(752871-752966)
chr4 (218-281)||(19097861-19097924)
chr4 (215-293)||(40224453-40224531)
chr4 (215-265)||(54580006-54580056)
chr4 (260-309)||(16184902-16184951)
chr4 (215-309)||(23861368-23861464)
chr4 (254-303)||(28084589-28084638)
chr4 (215-284)||(40179600-40179669)
chr4 (215-295)||(4157462-4157542)
chr4 (215-303)||(12797283-12797371)
chr4 (215-295)||(21945529-21945609)
chr4 (215-309)||(4672024-4672118)
chr4 (215-309)||(35161062-35161156)
chr4 (240-277)||(903984-904021)
chr4 (215-284)||(9996866-9996935)
chr4 (215-308)||(35157925-35158018)
chr4 (215-248)||(35723384-35723417)
chr4 (215-284)||(40006029-40006098)
chr4 (215-303)||(46715418-46715507)
chr4 (243-303)||(3947706-3947766)
chr4 (215-295)||(4157175-4157255)
chr4 (273-309)||(20633555-20633591)
chr4 (237-309)||(22234818-22234890)
chr4 (259-303)||(22440562-22440606)
chr4 (215-255)||(36409505-36409545)
chr4 (215-255)||(36423671-36423711)
[»] scaffold0050 (1 HSPs)
scaffold0050 (214-303)||(70303-70392)
[»] chr8 (38 HSPs)
chr8 (215-300)||(14134725-14134810)
chr8 (226-303)||(43737756-43737833)
chr8 (237-308)||(22652035-22652106)
chr8 (237-303)||(5813640-5813706)
chr8 (215-309)||(18407745-18407839)
chr8 (213-300)||(126295-126382)
chr8 (215-302)||(33405330-33405417)
chr8 (237-308)||(34450961-34451032)
chr8 (226-308)||(3951476-3951558)
chr8 (215-308)||(4786278-4786371)
chr8 (238-303)||(29447044-29447109)
chr8 (237-309)||(29510232-29510304)
chr8 (259-310)||(22204713-22204764)
chr8 (172-308)||(36450694-36450836)
chr8 (221-303)||(926733-926815)
chr8 (194-248)||(9097854-9097908)
chr8 (260-309)||(13397622-13397671)
chr8 (175-295)||(31556977-31557102)
chr8 (244-308)||(6065586-6065650)
chr8 (215-255)||(31236570-31236610)
chr8 (215-246)||(18964203-18964234)
chr8 (237-308)||(28745557-28745628)
chr8 (237-308)||(29447503-29447574)
chr8 (250-308)||(11944737-11944795)
chr8 (217-247)||(12606830-12606860)
chr8 (215-281)||(20679362-20679428)
chr8 (253-311)||(30067965-30068023)
chr8 (215-252)||(5138828-5138865)
chr8 (218-295)||(8293854-8293931)
chr8 (215-248)||(8847282-8847315)
chr8 (215-248)||(11927086-11927119)
chr8 (260-309)||(13403177-13403226)
chr8 (250-295)||(22943302-22943347)
chr8 (243-308)||(24858070-24858135)
chr8 (215-248)||(26902175-26902208)
chr8 (219-284)||(44462159-44462224)
chr8 (219-284)||(44469692-44469757)
chr8 (259-303)||(44067597-44067641)
[»] scaffold0380 (1 HSPs)
scaffold0380 (222-309)||(8634-8721)
[»] scaffold0652 (1 HSPs)
scaffold0652 (180-303)||(407-536)
[»] scaffold0450 (1 HSPs)
scaffold0450 (237-308)||(8564-8635)
[»] scaffold0083 (1 HSPs)
scaffold0083 (215-308)||(45470-45563)
[»] scaffold0793 (1 HSPs)
scaffold0793 (215-308)||(4821-4916)
[»] scaffold0361 (1 HSPs)
scaffold0361 (215-308)||(14556-14646)
[»] scaffold0053 (1 HSPs)
scaffold0053 (175-284)||(8778-8893)
[»] scaffold0003 (1 HSPs)
scaffold0003 (237-308)||(241653-241724)
[»] scaffold0512 (1 HSPs)
scaffold0512 (226-308)||(4976-5058)
[»] scaffold0306 (1 HSPs)
scaffold0306 (237-303)||(13454-13520)
[»] scaffold0152 (1 HSPs)
scaffold0152 (237-303)||(21807-21873)
[»] scaffold0623 (1 HSPs)
scaffold0623 (240-301)||(5932-5993)
[»] scaffold0171 (1 HSPs)
scaffold0171 (240-309)||(23573-23642)
[»] scaffold0009 (2 HSPs)
scaffold0009 (215-308)||(174493-174586)
scaffold0009 (215-308)||(180006-180099)
[»] scaffold0475 (1 HSPs)
scaffold0475 (226-310)||(3345-3429)
[»] scaffold0376 (1 HSPs)
scaffold0376 (216-248)||(6339-6371)
[»] scaffold0019 (1 HSPs)
scaffold0019 (237-309)||(71784-71856)
[»] scaffold0004 (1 HSPs)
scaffold0004 (161-213)||(92773-92825)
[»] scaffold0697 (1 HSPs)
scaffold0697 (228-278)||(1683-1733)
[»] scaffold0110 (1 HSPs)
scaffold0110 (216-246)||(28877-28907)
[»] scaffold0022 (1 HSPs)
scaffold0022 (214-248)||(99918-99952)
[»] scaffold0044 (1 HSPs)
scaffold0044 (237-301)||(53239-53303)


Alignment Details
Target: chr2 (Bit Score: 334; Significance: 0; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 18 - 399
Target Start/End: Complemental strand, 34994212 - 34993832
Alignment:
Q  18 tatatatataaagtgaaatgagaatagatacaaagaccaatttgagaaaacatacaaaggacacgacaaataaacctagcaagaattttcacactaaaaa 117  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34994212 tatatatatcaagtgaaatgagaatagatacaaagaccaatttgagaaaacatagaaaggacacgacaaataaacctagcaagaattttcacactaaaaa 34994113  T
Q  118 catatttaactcttacgtatatgcttaacaacctttcgaaacgatctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaaca 217  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  34994112 cgtatttaactcttacgtatatccttaacaacctttcgaaacgatctatgaagcacggacacggacactgatacgccaacaccgctaataatttgaaaca 34994013  T
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggacgggata 317  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  34994012 taattcaatgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcataggacgcgata 34993913  T
Q  318 tatcatgctatgattagtaacatccacaaacactcccacttttctcacacaattaaattgttaagattaatagagatcttcc 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  34993912 tatcatgctatgattagtaacatccacaaacactcccacttttctcacataattaaa-tgttaagattaatagagatcttcc 34993832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 303
Target Start/End: Original strand, 12224250 - 12224337
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| ||||||||||| | |||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||||| ||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgtttgtgctt 12224337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 5040760 - 5040845
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 300  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||| | |||||||||||| | |||||||||| ||||    
T  5040760 acataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 2438752 - 2438664
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||| | |||||||||||| ||||||||  |||||||||| |||||||||||||| | |||||||| |||||||    
T  2438752 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 2438664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 28596495 - 28596583
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| ||| |||||||||| |||||||||||| |||||||| |||||||||||| |||||| |||||| | |||||||| |||||||    
T  28596495 acataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgctt 28596583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 37411277 - 37411210
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgccta 282  Q
    |||||||||| ||| ||||||||||||| |||||||||||||  ||||||||||||||||||||||||    
T  37411277 acataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgccta 37411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 37558954 - 37559096
Alignment:
Q  172 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 265  Q
    ||||||| ||||||||| || || |||| |||||||||||| ||      |||||||||||||||||| | |||||||||||| ||  |||| |||||||    
T  37558954 acggacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccg 37559053  T
Q  266 acactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| || |||||| |||| | |||||||| ||||||| ||||    
T  37559054 acaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 5367218 - 5367292
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 289  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  | |||||| | |||||||||||||| ||||    
T  5367218 acataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 24009340 - 24009414
Alignment:
Q  234 tatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| ||||||| ||||    
T  24009340 tatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  238 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||| | |||||||| ||||||| ||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 20242760 - 20242665
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 310  Q
    |||||||||| ||||||||||||||||||||||| |||| ||| ||||| |||||  |||||||||| || | | ||||||  |||||| ||||||    
T  20242760 acataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcatagga 20242665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 30717530 - 30717459
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||||| |||||||||| ||||||| ||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 18570998 - 18571067
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |  | ||||||||  |||||||||||||    
T  18570998 acataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacaccaggacacgcctaat 18571067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 18841046 - 18840953
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||||||| | |||||||||||  ||||||||  |||||||||| ||||||| |||||| | |||||||| ||||||| ||||    
T  18841046 acataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 304
Target Start/End: Complemental strand, 29176526 - 29176437
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttt 304  Q
    |||||||||| |||||||||| |||| ||||| | ||||| ||  |||||||||||| ||||| |||||| |||| ||||||||| ||||    
T  29176526 acataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgttcgtacttt 29176437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 31808057 - 31808172
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    ||||| |||||||| ||||| |||||||||||||||| | |      ||||||||| |||||||||||||||| |||| ||||||||||  ||| |||||    
T  31808057 gacattgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgaca 31808156  T
Q  269 ctgggacacgcctaat 284  Q
    |  |||||| ||||||    
T  31808157 cctggacacacctaat 31808172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 37419802 - 37419874
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| ||||||   ||||||||||| |||||||||||||| | |||||||| ||||||| |||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 37419874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 15909620 - 15909570
Alignment:
Q  258 tgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||||||||||| | |||||||||||||| ||||    
T  15909620 tgtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 15972903 - 15972993
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||||||| | |||||||||||| |||||||| ||||||||| | ||||||| |||||| | | || ||| ||||||| |||||    
T  15972903 aattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatagg 15972993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 28677910 - 28678003
Alignment:
Q  196 acaccgctaataatttgaaa------cataattcaatgtaattatatgt-----gtcggtgtcgaacacgacatgtgtccgacactgggacacg 278  Q
    ||||||||||||||||||||      ||||||||| |||||||||||||     ||||||||| ||||||||| ||||||||||| ||||||||    
T  28677910 acaccgctaataatttgaaaaaatcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgacacagggacacg 28678003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 38117181 - 38117099
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||| ||||||| |||| ||| ||||||||||| |||||||||||||| | ||| |||| ||||||| ||||    
T  38117181 tgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 44860379 - 44860445
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||| ||||| | |||||||||||||||||||  ||||||| |||||||| |||||||| |||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgctt 44860445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 19942314 - 19942371
Alignment:
Q  238 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||||||| ||||| |||||||| ||||| |||||||||||||| | ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgt 19942371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 34985760 - 34985703
Alignment:
Q  49 aaagaccaatttgagaaaacatacaaaggacacgacaaataaacctagcaagaatttt 106  Q
    |||||||||||||| || |||||||||||||| ||||| | || ||||||||||||||    
T  34985760 aaagaccaatttgacaatacatacaaaggacaagacaagttaaactagcaagaatttt 34985703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 32749825 - 32749754
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| ||||| ||  |||||||||||||||||||||||||||| ||  ||||||||| || |||| ||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||| ||||||||||| |  |||||||||||   |||||||| ||||||| ||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 301
Target Start/End: Original strand, 21624294 - 21624374
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    ||||||||| |||||||| | ||||||||||||     |||| ||||||||||  ||||||| |||||| |||||||||| |||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcg-----gacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 31018570 - 31018655
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataattt--gaa----acataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    |||||||||||||| || |||||||||||||||||||  |||    |||| ||| | |||||||||| |||||||||||| |||||    
T  31018570 gacatggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacg 31018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 31855839 - 31855802
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  31855839 ataattcagtgtaattagatgtgtcggtgtcgaacacg 31855802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 34691836 - 34691799
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  34691836 ataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 34714248 - 34714211
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  34714248 ataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| |||| ||| ||||||||||| |||||||| ||||| | |||||||| ||||||| ||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 34221588 - 34221536
Alignment:
Q  163 ctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaa 215  Q
    |||||||||||||||| ||| |||||||  || |||| |||||||||||||||    
T  34221588 ctatgaagcacggacacggatactgatatgccgacacagctaataatttgaaa 34221536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 246
Target Start/End: Complemental strand, 44605173 - 44605141
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgt 246  Q
    |||||||||||||||||||| ||||||||||||    
T  44605173 aacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 44860347 - 44860379
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||| |||||||||||||||||||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 308
Target Start/End: Complemental strand, 21576817 - 21576685
Alignment:
Q  182 acactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 275  Q
    |||||||||| ||||||| |||||||||||||||      ||||||||| |||||||| | |||||| ||||| |||||||| ||||| |||||||||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggac 21576718  T
Q  276 acgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||| | |||||||| ||||||| ||||    
T  21576717 acgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 30502418 - 30502333
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||| |||||| |||||||||||    
T  30502418 taattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgctt 30502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 30542761 - 30542676
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||| |||||| |||||||||||    
T  30542761 taattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgctt 30542676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 30099070 - 30098983
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||  ||||||||||||||||||||||| | |||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  30099070 cataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgctt 30098983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 39268613 - 39268543
Alignment:
Q  233 atatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgctt 39268543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 43564907 - 43565001
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| | |||||||||| |||||||||||| |||||||||||||||||| | |||||||||||||| | || ||||| ||||||| |||||    
T  43564907 acataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatagg 43565001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 32630766 - 32630688
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||||||||||||||||||||| |||||| | |||||| |||||||||| || ||||| |||||||| ||||||||    
T  32630766 ataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacctaattcgaggagtgt 32630688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 21191089 - 21191001
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||| | |||||||||||| |||| ||| ||||||||| | |||||||||||||| | |||||||| |||||||    
T  21191089 acataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgctt 21191001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 42893328 - 42893455
Alignment:
Q  163 ctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaa------acataattcaatgtaattatatgtgtcggtgtcgaacacgac 256  Q
    |||||||||||||| |||||||| || ||||| |||| ||||||||||||||      ||||||| || |||||||| | |||||||||||  |||| ||    
T  42893328 ctatgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaac 42893427  T
Q  257 atgtgtccgacactgggacacgcctaat 284  Q
    | |||||||||||  |||||||||||||    
T  42893428 acgtgtccgacaccaggacacgcctaat 42893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 311
Target Start/End: Original strand, 27932261 - 27932357
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 311  Q
    |||||||||| |||||||| |  | | ||||||| |||||||| ||||| |||||  ||||||||||||||| ||||||||| |||||| |||||||    
T  27932261 acataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcataggac 27932357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 31084309 - 31084439
Alignment:
Q  181 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcg-----gtgtcgaacacgacatgtgtccgacac 269  Q
    |||||||| || || |||| |||||||||||||||      |||||||||||||||||| | ||||||     |||||| |||||||| |||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacac 31084408  T
Q  270 tgggacacgcctaattcaaggagtgttcgtg 300  Q
    ||||||| ||||||| | |||||||| ||||    
T  31084409 tgggacatgcctaatccgaggagtgtccgtg 31084439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 39698600 - 39698671
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| ||||||||||| |||||||| | |||||||||||| | |||||||| ||||||| ||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 23016022 - 23015937
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgt-----cgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||||| |||||| |||     || ||||||||||||||||||| ||||||||||||||| | ||||||||    
T  23016022 acataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgt 23015937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 21522809 - 21522873
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| ||| |||||| |||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21522873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 21533375 - 21533439
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||| |||||||| ||||||| ||| |||||||||||||| ||| |||||| |||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgc 21533439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 21542089 - 21542153
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||| |||||||| ||||||||||| |||||||||| ||| |||||| ||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgc 21542153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 17123029 - 17123166
Alignment:
Q  176 acatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 269  Q
    ||||||||||||| || ||||||||||||||||||||| |      ||||||  | |  |||||||| ||||||||| | |||||| |  ||||||||||    
T  17123029 acatggacactgacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacac 17123128  T
Q  270 tgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
     |||||||||||||| | |||||||| ||||||| ||||    
T  17123129 -gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 21814320 - 21814391
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||| ||||| | ||| ||||||||||| || |||||| ||||||||||| ||||    
T  21814320 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 21814391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 17925205 - 17925167
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacac 253  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  17925205 acataattcaatgtaataatatgtgtcggtgtcgaacac 17925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 42029778 - 42029820
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 257  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  42029778 acataattcaatgtaattatatgtatcggtgtcggacacgaca 42029820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 21194156 - 21194063
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| ||||| |||||||||| || | ||||| | ||||||||  |||| ||||| ||| |||||||||| | |||||||| ||||||||||||    
T  21194156 acatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 26312798 - 26312875
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||| ||||||||||||| ||||||||| |||||| | ||||| |||||  |||||| |||||| | ||||||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 30183621 - 30183666
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| |||||||||||||||||||||||||||| || |||||    
T  30183621 acacgacacgtgtccgacactgggacacgcctaattcgagaagtgt 30183666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 4105285 - 4105373
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||| | |||| ||| ||  || ||| ||||||| || ||||||||||||||||| | |||||||| |||||||    
T  4105285 acataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgctt 4105373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 23012439 - 23012380
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggaca 276  Q
    |||||| ||||||||||||||||||||||| | ||||||||  |||| ||||| ||||||    
T  23012439 ataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 15382533 - 15382591
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| | ||||||||  |||||||||| |||||||||||||| | ||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgt 15382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 28588707 - 28588665
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 257  Q
    |||||||||| |||||||||| |||||||||||| ||||||||    
T  28588707 acataattcagtgtaattataggtgtcggtgtcggacacgaca 28588665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 15874226 - 15874197
Alignment:
Q  224 aatgtaattatatgtgtcggtgtcgaacac 253  Q
    ||||||||||||||||||||||||||||||    
T  15874226 aatgtaattatatgtgtcggtgtcgaacac 15874197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 18145337 - 18145296
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacga 255  Q
    |||||||||||||||||| |||||||| |||||| |||||||    
T  18145337 aacataattcaatgtaatcatatgtgttggtgtcaaacacga 18145296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 18592099 - 18592132
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||||||||||||||||||| ||||||||    
T  18592099 acataattcaatgtaattatatgtgccggtgtcg 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 36642757 - 36642705
Alignment:
Q  242 ggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||  ||||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgt 36642705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 275
Target Start/End: Complemental strand, 18421874 - 18421814
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 275  Q
    ||||||| || |||||||||||||||||| |||| ||||||||  |||||| ||| |||||    
T  18421874 acataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggac 18421814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 174 - 308
Target Start/End: Original strand, 28152078 - 28152217
Alignment:
Q  174 ggacatggacactgatacaccaacaccgctaataatttgaaa-----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    ||||| ||||||||| || || |||  |||||||||||||||     ||||||||| |||||||| | |||||||||||| |||||||| ||||||||||    
T  28152078 ggacacggacactgacacgccgacaaagctaataatttgaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 28152177  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    | |||||| ||||||| | |||||||||||||||| ||||    
T  28152178 ccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 17841671 - 17841534
Alignment:
Q  172 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 265  Q
    ||||||| ||||||||| || || |||| |||||||||||||||      ||||||| | |||||||| | ||| |||||||| ||||||||||||||||    
T  17841671 acggacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccg 17841572  T
Q  266 acactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| |||||||||||| | |||||||| |||||||    
T  17841571 acactgagacacgcctaatccgaggagtgtccgtgctt 17841534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 28715321 - 28715415
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| |||||||| | |||||||||||| |||||||| |||| |||||| |||||||||||||||| || ||||| ||||||| |||||    
T  28715321 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatagg 28715415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 7378005 - 7378074
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||||||| |||||||| |||||    
T  7378005 acataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaat 7378074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 33001322 - 33001228
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| ||||||||||||||||||||||||| |||||||| ||||| ||||| |  | ||||||||| ||| ||||||| |||||| |||||    
T  33001322 acataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatagg 33001228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 34595160 - 34595253
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||||| |||||||| ||||| ||||| ||||||| |||||| | |||||||| ||||||| ||||    
T  34595160 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 308
Target Start/End: Complemental strand, 7977909 - 7977770
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||||||| ||||| || || |||| |||||||||||||||      ||||||||| |||||||| | |||||||||||| |||| |||| |||||||||    
T  7977909 gacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgaca 7977810  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
      |  |||||||||||  ||||||||||||||||| ||||    
T  7977809 acgaaacacgcctaatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 32978932 - 32978844
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| | |||||||| | |||||||||||| ||||||||  |||||||||| |||||||| ||||| |||||||||| |||||||    
T  32978932 acataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgctt 32978844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 9658859 - 9658994
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataattt--gaaa----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| ||||||||| || || ||||||||||||||||  ||||    ||||||||| ||||||||||| |||||||||   |||||||| ||||| ||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgaca 9658958  T
Q  269 ctgggacacgcctaatt-caaggagtgttcgtgctt 303  Q
    | || |||||||||||| |||||||||| |||||||    
T  9658959 ccggaacacgcctaattccaaggagtgtccgtgctt 9658994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 303
Target Start/End: Complemental strand, 7265686 - 7265538
Alignment:
Q  161 atctatgaagcacggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    |||||||||||||| |   ||||||||| || ||||||||||||||||||||| |      ||||||||| ||||||||||||||||||||||| ||||     
T  7265686 atctatgaagcacgtattcggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 7265587  T
Q  255 acatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    | |  |||||||||| || | | ||||||| | ||||| || |||||||    
T  7265586 atacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgctt 7265538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 8365519 - 8365447
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||| | |||||| | ||||||| |||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatagg 8365447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 10339125 - 10339053
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||   |||||||| ||||||| |||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagg 10339053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 12690441 - 12690516
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 289  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||||||||  |||   | ||||||||||||||||    
T  12690441 aacataattcaatgtaattatatgtgtcgatgtcggacactacatgtgtctaacatcagaacacgcctaattcaag 12690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 21044873 - 21044827
Alignment:
Q  249 aacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  21044873 aacacgacatgtgtccgacactgggacacgcctaatctaaggagtgt 21044827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 13360405 - 13360313
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| ||||||||||||| ||||||||  |||| |||  |||||||||||| |||||||||||| | | |||||| ||||||| ||||    
T  13360405 acataattcagtgtaattatatgtttcggtgtcagacacaacaa-tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 30851630 - 30851674
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtc 263  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  30851630 aattcaatgtaattatatgtgtcggtgtcggacacgacacgtgtc 30851674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 3209447 - 3209518
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||| ||||||||||||||| | |||||||||  ||||||||||||| | ||||||||| |||||| ||||    
T  3209447 gtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 16488590 - 16488519
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||| ||||| | ||| ||||||||||| || |||||| ||||||||||| ||||    
T  16488590 gtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatag 16488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 21068128 - 21068085
Alignment:
Q  252 acgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  21068128 acgacatgtgtccgacactgggacacgcctaatctaaggagtgt 21068085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 4877969 - 4878062
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| | | |||||| | |||||||||||| ||||||||  ||||||||||  ||||||||||||| | |||||||| ||||||| |||||    
T  4877969 acataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatagg 4878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 13689571 - 13689533
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttga 213  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13689571 gacatggacactgatacatcaacaccgctaataatttga 13689533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 13789191 - 13789273
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||| ||  ||||| ||| |||| ||||| ||||  |||| |||||| ||||||||||||||||||||| ||||    
T  13789191 tgtaattatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 13797810 - 13797892
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||| ||  ||||| ||| |||| ||||| ||||  |||| |||||| ||||||||||||||||||||| ||||    
T  13797810 tgtaattatatgtatcaatgtcggacatgacacgtgtctgacatggggatacgccttattcaaggagtgttcgtgcttcatag 13797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 17327655 - 17327589
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||||||| ||||| ||||| |||||||||||||| | |||||||| ||||||| |||||    
T  17327655 gtgtcggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatagg 17327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 7996409 - 7996327
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| |||||||||||| ||||||||||    ||||| |||||  |||| |||||||||||||| |||||||| | |||||||    
T  7996409 ataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgctt 7996327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 303
Target Start/End: Original strand, 8022392 - 8022474
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| |||||||||||| ||||||||||    ||||| |||||  |||| |||||||||||||| |||||||| | |||||||    
T  8022392 ataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgctt 8022474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 9617460 - 9617493
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||||||||||||||||||||||||||||    
T  9617460 acataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 9629409 - 9629442
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||||||||||||||||||||||||||||    
T  9629409 acataattcaatgtaattatatgtgtcggtgtcg 9629442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 30866217 - 30866149
Alignment:
Q  181 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcgg 243  Q
    ||||| || |||||||||||||||||||||||| |      ||||||||||||||||||||||||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 31384991 - 31385044
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| |||||| |||| |||||||||||||| |||||||||| |||||||    
T  31384991 acacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgctt 31385044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 853892 - 853812
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| | || ||||| | |||||||||||| | |||||||||||||||||  | |||||||||||| ||| ||||||    
T  853892 acataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatccaatgagtgt 853812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 18367895 - 18367967
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||  ||||||||  |||| ||||| ||||||||||| || |||||||||| ||||||| |||||    
T  18367895 gtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagg 18367967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 7248417 - 7248488
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| | |||| ||||||||||||||| |||||||| | ||| | |||||||| ||||||| ||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||| || |||||||||||| ||||||| |||||| | |||||||  ||||||| ||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 16766756 - 16766803
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||||| |||| ||| ||||||||||| ||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaat 16766803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 6898314 - 6898220
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| | |||||||| | |||||||||||| ||||||   |||||| |||| |  ||||||||||| | | |||||||||||||| |||||    
T  6898314 acataattaagtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatagg 6898220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 249
Target Start/End: Original strand, 7027268 - 7027302
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcga 249  Q
    |||||||||| ||||||||||||||||||||||||    
T  7027268 acataattcagtgtaattatatgtgtcggtgtcga 7027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 301
Target Start/End: Original strand, 7930371 - 7930413
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||  ||||||||||||||| ||||||||||||||    
T  7930371 gtgtccgacaccaggacacgcctaattcgaggagtgttcgtgc 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 9027158 - 9027286
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| ||||||||| || || |||||||||||||||||| |      ||||||||  |||||||||||||||||||||||           |||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg-----------tgtccgaca 9027246  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    | |||||||| ||||| ||||||||||| |||||| ||||    
T  9027247 ccgggacacggctaatccaaggagtgtttgtgcttcatag 9027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 19040378 - 19040420
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgaca 257  Q
    |||||||||| |||||||||||||||| |||||| ||||||||    
T  19040378 acataattcagtgtaattatatgtgtctgtgtcggacacgaca 19040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 20371191 - 20371106
Alignment:
Q  173 cggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaaca 252  Q
    |||||| ||||| ||| || || |||||||||||||||||| |      ||||| ||||||| |||||||||||||||||||||||    
T  20371191 cggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcgaaca 20371106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 23771610 - 23771672
Alignment:
Q  221 ttcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaa 283  Q
    |||| |||||||| |  ||||||||||| |||||||||||||||||||| | |||||| ||||    
T  23771610 ttcagtgtaattacaaatgtcggtgtcggacacgacatgtgtccgacacagagacacgtctaa 23771672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 25096491 - 25096549
Alignment:
Q  246 tcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttt 304  Q
    ||||| |||||| |||||| ||||||||||||| ||||||| |||| |||| |||||||    
T  25096491 tcgaaaacgacacgtgtcccacactgggacacgtctaattcgaggaatgtttgtgcttt 25096549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 31959214 - 31959264
Alignment:
Q  253 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||||||||||| ||||||| |||||| | |||||||| |||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 31959264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 7625186 - 7625235
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||| || |||||| |||| |||||||||||||||||| ||||    
T  7625186 gtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 9025527 - 9025494
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  9025527 acataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 11424712 - 11424679
Alignment:
Q  236 tgtgtcggtgtcgaacacgacatgtgtccgacac 269  Q
    ||||||||||||||||||||||||||||| ||||    
T  11424712 tgtgtcggtgtcgaacacgacatgtgtccaacac 11424679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 25207810 - 25207859
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||| ||||||||||||||   |||||||||| ||||||||||    
T  25207810 gtgtccgacaccgggacacgcctaatatgaggagtgttcatgctttatag 25207859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 10294134 - 10294166
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||| ||||||||||||||||||||||||||||    
T  10294134 catatttcaatgtaattatatgtgtcggtgtcg 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 12236683 - 12236779
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||||||||||  ||||||||| |||  |||| |||||  ||| || ||| |||||||||||||    |||||||||||||||| |||||    
T  12236683 aacataattcaatgtaatcgtatgtgtcgatgttaaacaccgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcatagg 12236779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 21924966 - 21924930
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacac 253  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  21924966 ataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 32298640 - 32298552
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| | ||||||||||||||| ||||||  ||| ||||| ||||| ||||  | ||||||||||||  | |||||||| |||||    
T  32298640 acataatttagtgtaattatatgtgttggtgtcagacatgacatatgtccaacaccagaacacgcctaatttgatgagtgttcatgctt 32298552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 34446618 - 34446690
Alignment:
Q  237 gtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||| ||||| |||  || || ||||||||||||| |||||| |||||||||| ||||||| ||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatag 34446690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 40993368 - 40993274
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| ||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||| | |||||||| | ||||| |||||    
T  40993368 acataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatagg 40993274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 35222964 - 35223057
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||| ||||||||| | || | |||||||| ||||||| ||||    
T  35222964 acataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 55401055 - 55401194
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| |||||||||||| || ||||  ||||||||||||||      ||||||| | |||||||| | |||||||||||| |||||||| ||||||||||    
T  55401055 gacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 55401154  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    | | |||||||||||| | |||||||| ||||||| ||||    
T  55401155 ccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 28918027 - 28918109
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcga--acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||| | ||||||||||||   |||||||| |||||||||||||||||||||||||| ||||||||||    
T  28918027 acataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgt 28918109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 10954978 - 10955056
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 293  Q
    |||||||||| |||||| | | |||||||||||| |||||||| |||||||||||||||||||||||||| | ||||||    
T  10954978 acataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 13845547 - 13845465
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||||||||||||| |||||| | ||||| ||||| | ||||||||| || |||||||||| ||||||| ||||    
T  13845547 tgtaattatatgtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 20503491 - 20503584
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||| | ||||||||  |||| ||||| |||||||||||||| | |||||||| ||||||| ||||    
T  20503491 acataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 25775535 - 25775621
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||| | |||||||||||| ||||| |  |||||||||||  ||||||||||||| | ||||||||||||||||    
T  25775535 acataattcagtgtaattacaagtgtcggtgtcggacacgtc--gtgtccgacaccaggacacgcctaatccgaggagtgttcgtgctt 25775621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 41961650 - 41961578
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||| | || ||||| ||||||| |||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagg 41961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 308
Target Start/End: Complemental strand, 4466631 - 4466540
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| ||||  |||||||| |||||||| | || | |||||||||||||||||||||| || |||| |||||||| ||||||| ||||    
T  4466631 ataattcagtgtagctatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 3631710 - 3631796
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||| |||||||||||||| | |||||| ||||||||  ||||||||||  ||||||||||| | | |||||||| |||||    
T  3631710 acataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 7171529 - 7171607
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||  |||||||| | |||| ||||||| |||||||| ||||||||||| | |||||||||||| ||||||||||    
T  7171529 ataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 24633431 - 24633363
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattc 286  Q
    ||||||||||||||||||||||||||||| | ||||||||  ||||  |||| || |||||||||||||    
T  24633431 taattcaatgtaattatatgtgtcggtgttggacacgacacttgtctaacaccggtacacgcctaattc 24633363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 34185116 - 34185052
Alignment:
Q  244 tgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||| ||| |||||||||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 7928445 - 7928515
Alignment:
Q  190 acaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacg 254  Q
    ||||| ||||||||||||||||||||      ||||||||| ||||||||||||||||||||||| |||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 8789583 - 8789493
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacg--acatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||  ||||||||||||||||||||||| |||||  |||  |||| ||||| | |||||||||||| | |||||||| |||||||    
T  8789583 acataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgctt 8789493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 16000008 - 15999957
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||| ||||||||||| |||||||||||||| |||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgc 15999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 4987291 - 4987233
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 4987233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 40052382 - 40052432
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||| |||||||||||||| | |||||||||||||||| |||||    
T  40052382 gtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatagg 40052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 18426975 - 18427044
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||  ||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||| ||||||    
T  18426975 acataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaat 18427044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 24205074 - 24204986
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||| || |||||||||| |||||| ||||| |||| |||  |||||||||||  ||||||||||||||| |||||||| |||||||    
T  24205074 acataatacagtgtaattataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 24204986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 25074865 - 25074914
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| ||||    
T  25074865 gtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 13414497 - 13414533
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacac 253  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13414497 ataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 14832158 - 14832206
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaatt 285  Q
    |||||||| ||| |||||||| ||||||||||| |||||||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaatt 14832206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 25093532 - 25093584
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactg 271  Q
    |||||| ||||||||||||||||||||||| |||| |||  ||||||||||||    
T  25093532 aattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacactg 25093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 305
Target Start/End: Original strand, 2941595 - 2941674
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttta 305  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||  |||| | |||| || |||| | |||| ||||||||    
T  2941595 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaagaaatgtttgtgcttta 2941674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 15796294 - 15796223
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| ||||||| |||| ||| |||||| |||| || ||||||||||| ||| |||||||||||||| ||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 27505312 - 27505370
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| ||||||||||| |||||| ||||||| | |||||||| ||||||| ||||    
T  27505312 acacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 21211364 - 21211413
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||||||||| |||||| | ||||||||| |||||| ||||    
T  21211364 gtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 10455863 - 10455915
Alignment:
Q  256 catgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||||||||||||||  |||| ||||||||||  |||||| ||||    
T  10455863 catgtgtccgacactgggacacgtttaatccaaggagtgtatgtgcttcatag 10455915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 14209172 - 14209244
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| |||||||| |||| |||||  |||| || |||||| |||| ||||| ||||||| |||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatagg 14209244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 14216957 - 14217017
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| |||||||| |||| |||||||||||||| |||||| | || ||||| |||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgctt 14217017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Original strand, 14223086 - 14223146
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| |||||||| |||| |||||||||||||| |||||| | || ||||| |||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgctt 14223146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 253
Target Start/End: Complemental strand, 21419486 - 21419450
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacac 253  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  21419486 ataattcaatgtaattatatatgttggtgtcgaacac 21419450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 37598861 - 37598951
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||| | |||||||| ||||||| |||||    
T  37598861 aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatagg 37598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 5898339 - 5898205
Alignment:
Q  181 gacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggga 274  Q
    |||||||| || || |||||||||||||| |||||      ||||||||| |||||||||||| |||||||||  |||||||| |||||| |||| ||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccggga 5898240  T
Q  275 cacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||| ||||| | |||||||| |||||||||||||    
T  5898239 cacgtctaatccgaggagtgtccgtgctttatagg 5898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 51410051 - 51410145
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| |||||||| | |||||||||||| |||||||| || |||||||| | |||||||||||| |||||||| ||||||||| |||||    
T  51410051 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatagg 51410145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 18337355 - 18337448
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||||| |||| ||| |||||||||||||||||| |||| || | |||||||| ||||||| ||||    
T  18337355 acataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 29163414 - 29163326
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||| | ||||| |||||||| |||||   || |||||||||||||    
T  29163414 acataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgctt 29163326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 32461465 - 32461393
Alignment:
Q  236 tgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||||||| |||| ||||| ||||||| ||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 42359478 - 42359394
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| |||||||| | |||||||||||| ||| ||| |||||||||||| |||||||||||||| | |||||||| |||||||    
T  42359478 aattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgctt 42359394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 40181897 - 40181976
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtg 294  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||| |||||| |||| |||||||||||||| | |||||||    
T  40181897 acataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 308
Target Start/End: Complemental strand, 34712417 - 34712323
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||| | |||||||||||||||| ||||||     |||| |||||| ||||||||||||| |||||||||||||||| ||||||| ||||    
T  34712417 aacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 38078694 - 38078601
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||||||||||| | |||||||||||| ||||||||  ||| | ||||  ||||||||||||| | |||||| ||||||||| ||||    
T  38078694 acataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 52903277 - 52903365
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| ||||||||||||||||||||||| |||||   |||||||||||| |||||||| || |||| | |||||| ||||||| ||||    
T  52903277 ataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 12918971 - 12919059
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||||| ||||||||||| ||| ||| |||||||| ||||| ||||| |||||||| || || | || |||||||||||||    
T  12918971 acataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgctt 12919059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 46348465 - 46348323
Alignment:
Q  172 acggacatggacactgatacaccaacaccgctaataatttgaaaca------taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 265  Q
    ||||||| ||||||||| || || |||| ||||||||||||||| |      ||||| | |||||||| | |||||||||||| |||||||| |||||||    
T  46348465 acggacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccg 46348366  T
Q  266 acactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| | ||||||||| || | ||| |||| ||||||| ||||    
T  46348365 acaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 2896195 - 2896074
Alignment:
Q  180 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggg 273  Q
    ||||||||| || || |||||||||||||||||| |      ||||||||| ||||  ||||| ||||||||||  ||||||||||||||||| || |||    
T  2896195 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccggg 2896096  T
Q  274 acacgcctaattcaaggagtgt 295  Q
    |||| |||||| |||| |||||    
T  2896095 acacacctaatccaagaagtgt 2896074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 8842745 - 8842667
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||| ||||||||||||||| | ||||||| |||||||| || |||||||   ||||||||||||||||| ||||||    
T  8842745 ataatttaatgtaattatatgtattggtgtcggacacgacacgtatccgacatcaggacacgcctaattcaaagagtgt 8842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 1486742 - 1486657
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcga-----acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||||| ||||||||||||      |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  1486742 acataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 1486657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 1815283 - 1815352
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| |||||||| | |||||||||||  ||||||||  |||||||||| ||||||||||||||    
T  1815283 acataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaat 1815352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 10577757 - 10577680
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||||||||| | || |||||||  ||||| ||||| ||||||||||| || |||||||||| |||||||    
T  10577757 tgtaattatatgtgtcgggggcggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 10577680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 22515920 - 22515827
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||||||| | |||||||||||| ||||||||  | |||||||| | |||||||||||| | |||||||| ||||||| ||||    
T  22515920 acataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 30749866 - 30749959
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||  ||| |||| | |||| |||||||| | ||||| ||||    
T  30749866 acataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcatag 30749959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 30771317 - 30771410
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||||  |||||  ||| |||| | |||| |||||||| | ||||| ||||    
T  30771317 acataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatgcttcatag 30771410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 25934675 - 25934747
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| |||||||| ||||| ||||| |||| |||||| || |||||||||| ||||||| |||||    
T  25934675 gtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatagg 25934747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 40258966 - 40258886
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||| | |||||||||||  ||||||||  ||||||||||  ||||||||||||| | ||||||||    
T  40258966 acataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgt 40258886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 40917808 - 40917880
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| | |||||||| ||||||||||| |||||||||||||| | |||| ||| ||||||| |||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatagg 40917880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 6427335 - 6427409
Alignment:
Q  180 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||| || ||||||||||||||||||||| |      ||||||||||||||||||||||||| |||||||    
T  6427335 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 6612171 - 6612113
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||| ||||| |||||| |||||||||||||  ||||||||||||| ||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgt 6612113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 7353526 - 7353456
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatg-tgtccgacactgggacacgcctaat 284  Q
    |||||||| | ||||||||||| ||||||||||||||| |||| | | |||||||||| ||||||||||||    
T  7353526 acataatttagtgtaattatatatgtcggtgtcgaacatgacacgttttccgacactgagacacgcctaat 7353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 38076003 - 38075909
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| ||| |||||| |||||||||||||||| ||| |||  |||| ||||||| |||||||||||||||  |||||||| | ||||| ||||    
T  38076003 acataagtcagtgtaatcatatgtgtcggtgtcggacatcgatgtgtgaccgacaccgggacacgcctaatttgaggagtgtacatgcttcatag 38075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 39130798 - 39130720
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||| | ||||||||||||||||||||||| |||| ||| |||  ||||| |||||||||| |||| ||| ||||||    
T  39130798 ataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgt 39130720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 11412801 - 11412712
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacga-catgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||||| || ||| |||||||||| | |||| | ||||||||||||||| ||||| |||| || | |||||||| |||||||    
T  11412801 acataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgctt 11412712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 16297287 - 16297226
Alignment:
Q  242 ggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||| ||||||| ||||||||||||  ||||||||||||| | |||||||| |||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgctt 16297226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 9828103 - 9828175
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||| |||||  |||||||| ||||||||||| |||||||| ||||| | |||||||| ||||||| |||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagg 9828175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 18190141 - 18190061
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||| | |||||| ||||  |||| ||| ||||||||||| ||||||| |||||| | ||||||||    
T  18190141 acataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 281
Target Start/End: Original strand, 39410667 - 39410735
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcct 281  Q
    ||||||||||||||||| || |||||| ||||||| |||  |||||||||| |||||||||||| ||||    
T  39410667 aacataattcaatgtaactacatgtgttggtgtcggacattgacatgtgtcagacactgggacatgcct 39410735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 48040463 - 48040419
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||||||||||||||||||  |||||||| |||||||    
T  48040463 gtgtccgacactgggacacgcctaattggaggagtgtccgtgctt 48040419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 309
Target Start/End: Complemental strand, 9690303 - 9690212
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||||| ||||||||||| ||||  ||| |||| ||||||||||| |||||||||||||| |   ||||||| |||||| |||||    
T  9690303 aattcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatagg 9690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 40285730 - 40285695
Alignment:
Q  178 atggacactgatacaccaacaccgctaataatttga 213  Q
    ||||||||||| ||||||||||||||||||||||||    
T  40285730 atggacactgacacaccaacaccgctaataatttga 40285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 47989556 - 47989627
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| ||||||||  |||| ||||  |||||||||||||| | |||||||| ||||||| ||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 311
Target Start/End: Original strand, 6427531 - 6427597
Alignment:
Q  245 gtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 311  Q
    |||| |||||||| ||||||||||| ||||||||||||||   | |||||| ||||||| |||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcataggac 6427597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 19637794 - 19637872
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 293  Q
    |||| |||||||||||| |||||||||||||||| |||||| |  | |||||||| ||||| | |||||| | ||||||    
T  19637794 acattattcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagt 19637872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 21032265 - 21032323
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||| ||||||| |||||||||||||||||||  | || ||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgt 21032323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 21530728 - 21530778
Alignment:
Q  228 taattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacg 278  Q
    |||||||| |||||||||||| ||||||||  ||||||||||| |||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 30847753 - 30847683
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaaca-cgacatgtgtccgacactgggacacgcctaat 284  Q
    ||||||||||||||||| ||||||||| |||| ||||| |||  ||||||||||||| | |||| ||||||    
T  30847753 acataattcaatgtaatcatatgtgtcagtgttgaacaccgatgtgtgtccgacactagaacacacctaat 30847683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 309
Target Start/End: Complemental strand, 46940797 - 46940747
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||| || ||||||||||| | |||||||||||||||| |||||    
T  46940797 gtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatagg 46940747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  263 ccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||||||||||||| |||||||||  ||||||| ||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 28674826 - 28674895
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| | ||||||||| ||| ||||||  ||||||||  ||||| |||||| ||||||||||||    
T  28674826 acataattcagtataattatatatgttggtgtcagacacgacacttgtccaacactgagacacgcctaat 28674895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 31672995 - 31672934
Alignment:
Q  155 gaaacgatctatgaagcacggacatgg-acactgatacaccaacaccgctaataatttgaaa 215  Q
    |||| ||||||||||||||||| | || ||||||| ||||| |||| |||||||||||||||    
T  31672995 gaaaggatctatgaagcacggatacgggacactgacacaccgacacagctaataatttgaaa 31672934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 34371739 - 34371772
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  34371739 acataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 44482256 - 44482289
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  44482256 acataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 5944365 - 5944413
Alignment:
Q  260 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||| ||||||||| | |||||||||||||||| ||||    
T  5944365 tgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 15765822 - 15765878
Alignment:
Q  253 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||| |||||| |||||||||||||||||||| | | |||||| ||||||| |||||    
T  15765822 cgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatagg 15765878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 17831534 - 17831486
Alignment:
Q  237 gtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaat 284  Q
    ||||| |||||| |||| |||||||||||||||| ||||||||||||||    
T  17831534 gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaat 17831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 26830614 - 26830701
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||| |||||||||||| ||||| |||||  |||| ||| |||| ||| || ||||||||||||||   |||||||| |||||||    
T  26830614 acataattaaatgtaattataagtgtc-gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 310
Target Start/End: Original strand, 15680835 - 15680930
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 310  Q
    |||||||| | |||||||||| |||||||||||| |||||||| ||||||||||| | |||||| ||||||| |||||||| ||||||| ||||||    
T  15680835 acataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatagga 15680930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 303
Target Start/End: Original strand, 20549778 - 20549905
Alignment:
Q  182 acactgatacaccaacaccgctaataatttgaaaca------taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggac 275  Q
    ||||||| ||||| |||||||||||||||||| | |      ||||||| ||||||||||||||||||||||| |||| |||  ||||||||| || |||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagac 20549877  T
Q  276 acgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||| | |||||||  |||||||    
T  20549878 acgcctaatccgaggagtgcccgtgctt 20549905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 32287496 - 32287408
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| || || ||||||||||||||||| ||| |||| ||||||||||| ||||||| |||||| | |||||||| |||||||    
T  32287496 acataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgctt 32287408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 598188 - 598327
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataattt--gaaa----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| ||||||||| ||| | ||||||||||||||||  ||||    | ||||| ||||||||| || |||||||||||  |||||||| ||||||||||    
T  598188 gacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgtccgaca 598287  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    | |||||||||||||| | || ||||| ||||||| ||||    
T  598288 ccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 238 - 309
Target Start/End: Original strand, 7438766 - 7438837
Alignment:
Q  238 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| |||||||||  ||| ||||||| |||||||||||||||||||||||| ||||||| |||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatagg 7438837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 214 - 308
Target Start/End: Original strand, 5835272 - 5835366
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||| ||||||||||||||||||||||  ||| |||||||||| || || ||||||||| |||| | || ||||||  ||||||||||    
T  5835272 aacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgcttaatccgagaagtgtttttgctttatag 5835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 21880178 - 21880271
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||||| ||||||||  ||||||||||  ||||||||||||| | || ||||| ||||||| ||||    
T  21880178 acataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 308
Target Start/End: Original strand, 24105658 - 24105797
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| ||||||||| || || |||| |||||||||||||||      ||| ||||| |||||||| | ||||||| ||||  ||| ||||||||||||||    
T  24105658 gacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgaca 24105757  T
Q  269 ctgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    | |||||||||||||  | ||||||||| |||||| ||||    
T  24105758 ccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 308
Target Start/End: Original strand, 21864836 - 21864927
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| | |||||||| | |||||| ||||| |||||||| ||||||||||| |||||||| ||||||| ||||||||  |||||| ||||    
T  21864836 ataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 25481883 - 25482021
Alignment:
Q  176 acatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 269  Q
    ||||||||| ||| || || |||| |||||||||||||||      ||||||||| |||||||| | |||| ||||||| |||||| ||||||||||||     
T  25481883 acatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacat 25481982  T
Q  270 tgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||  |||||| |||||||| |||| | ||||||| ||||    
T  25481983 tgaaacacgcttaattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 5409836 - 5409770
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||||||| ||||||||||| |||||||||||||| | |||||||| ||||||| |||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagg 5409770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 9778559 - 9778625
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||| |||| ||| ||||||||||| |||||||||||||| |||||||||| ||||||| |||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatagg 9778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 33994238 - 33994332
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| || ||||| | |||||||||||  ||||||||  ||||| |||| | |||||||||||| ||||||||||||||| || |||||    
T  33994238 acataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatagg 33994332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 27093446 - 27093377
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||| | |||||||||||| ||||||||   ||||||||||||||||||||| |||||| ||||||    
T  27093446 acataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27093377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 27184855 - 27184924
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||| | |||||||||||| ||||||||   ||||||||||||||||||||| |||||| ||||||    
T  27184855 acataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaat 27184924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||| || |||||||| |||||||||||||| | |||||||  ||||||| ||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 308
Target Start/End: Complemental strand, 42720948 - 42720830
Alignment:
Q  196 acaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaag 289  Q
    ||||||||||||||||||||      ||||||| |||||||||||||||||| |||||  |||| |||||||| | |||| || ||||| ||||||| |     
T  42720948 acaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacacaacatgtgtacaacaccggaacacgtctaattcgat 42720849  T
Q  290 gagtgttcgtgctttatag 308  Q
     |||||| |||||| ||||    
T  42720848 aagtgtttgtgcttcatag 42720830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 32094020 - 32093954
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactggg-acacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| |||||||| ||||||||||| ||| ||||||||||| | |||||||||||||||| ||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 18213066 - 18212973
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | ||||||||||||||||||||||| |||||||   | || ||||| ||||||||||| || | ||||||||  |||||| ||||    
T  18213066 acataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtgcttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 26022579 - 26022539
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacat 258  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  26022579 taattcagtgtaactatatgtgtcggtgtcgaacacgacat 26022539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 27732272 - 27732189
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||||||||||||||     ||||||||| ||||||||||  |||||| |||||||| |  ||||| |||||||    
T  27732272 acataattcagtgtaattatatgtgtcggt-----acacgacatatgtccgacaccaggacacacctaattcgaaaagtgtccgtgctt 27732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 1433491 - 1433578
Alignment:
Q  226 tgtaattatatgtgtcggtgtcga-----acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||||||||||||||      ||| ||||||||||||||||  ||||||| ||||| | |||||||| ||||||| ||||    
T  1433491 tgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 5307297 - 5307375
Alignment:
Q  230 attatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||  ||| || |  ||| ||||||| ||||||||||||| |||||||||| ||||||| ||||    
T  5307297 attatatgtgtcagtgtcatacaagatagatgtgcgacactaggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 284
Target Start/End: Original strand, 8234171 - 8234241
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    ||||||||||| |||| ||| | ||| |||||||| ||||||||  |||||||||| | ||||||||||||    
T  8234171 aacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaat 8234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 39138470 - 39138536
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 281  Q
    |||||||||| ||||||||||| ||||||||||| |||||| |  ||||  |||| |||||||||||    
T  39138470 acataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgcct 39138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 43027462 - 43027404
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| ||||||||||| |||||||||||||| | | |||||| ||||||| ||||    
T  43027462 acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 22602743 - 22602710
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  22602743 acataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 26733330 - 26733399
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| | |||||| |||||||||||||| |||||||   ||||||| || || |||||||||||    
T  26733330 acataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaat 26733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 640139 - 640171
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtc 247  Q
    |||||||||| ||||||||||||||||||||||    
T  640139 acataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 3520373 - 3520345
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtg 245  Q
    |||||||||||||||||||||||||||||    
T  3520373 ataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 3554539 - 3554459
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| ||||||||||||  ||||||||||| ||||||||  | ||  |||||| |||||| ||||||| | ||||||    
T  3554539 acataatttaatgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgt 3554459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 7197327 - 7197271
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggga 274  Q
    |||||||||||||||| | |||||||||||| |||| |||  |||||||||| ||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 8160475 - 8160547
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||||||||||    ||||||||||| | || || |||||||| ||||| || |||||||||||||    
T  8160475 gtgtcggtgtcgaacacgtatcgtgtccgacaccgagatacacctaattctaggagcgtccgtgctttatagg 8160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 24146842 - 24146874
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtc 247  Q
    |||||||||||| ||||||||||||||||||||    
T  24146842 acataattcaatataattatatgtgtcggtgtc 24146874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 43250074 - 43250118
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||    
T  43250074 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 12895296 - 12895214
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||||||| ||||||||||| |||||||  |||||||||||||| | |||||||||||||||| ||||    
T  12895296 tgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 23293019 - 23292926
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| | |||||| | |||||||||||| |||||||| ||||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  23293019 acataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 49431052 - 49431145
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||||| |||||||| |||||| |||| ||||||||||| || | |||||||| | ||||||||||    
T  49431052 acataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 8423751 - 8423682
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| ||||||||||  ||||||||||| ||||||||  |||||||||| ||||||||||||||    
T  8423751 acataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaat 8423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 28964281 - 28964188
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | ||||| |||||| ||||||||  | ||||||||||||||||||||||| | |||||||| | ||||| ||||    
T  28964281 acataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 19482727 - 19482799
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||| | | |||||||| ||||||||||||||||||| |||||| | |||||||||||||||| |||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatagg 19482799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 29205529 - 29205587
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||  ||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  29205529 acacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 30982878 - 30982812
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||  |||||||| ||||||||||| |||||||||||||| ||| |||||| |||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgctt 30982812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 34306826 - 34306744
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||||||||||| |||||||| ||||||||||| | ||||||||||||   |||| ||||||||||| ||||    
T  34306826 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 309
Target Start/End: Original strand, 16073421 - 16073514
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||| |||||||| | |||||||||||| |||||| |  |||||||||||  |||||||||||| | |||||||| | ||||| |||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatagg 16073514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 715640 - 715545
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  715640 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 752966 - 752871
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  752966 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 19097924 - 19097861
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 281  Q
    ||||||| | ||||||||| ||||||||||||||| |||| ||||| ||||| |||||||||||    
T  19097924 taattcagtataattatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcct 19097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 293
Target Start/End: Complemental strand, 40224531 - 40224453
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagt 293  Q
    |||||||| |||||||| |||||||||||||| | ||| || |||| ||||||| ||||||||| ||||| | ||||||    
T  40224531 acataatttaatgtaatcatatgtgtcggtgttggacatgatatgtttccgacattgggacacgtctaatccgaggagt 40224453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 54580056 - 54580006
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 265  Q
    |||||||||| |||||||||| |||||||||||| |||||||| |||||||    
T  54580056 acataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccg 54580006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 16184902 - 16184951
Alignment:
Q  260 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||||||||||||||||| | ||||||||| |||||| |||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatagg 16184951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 23861464 - 23861368
Alignment:
Q  215 acataattcaatgtaattatat--gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||| |||||||||||||||||  |||||||||||  | ||||||  |||| | |||   |||||||||||||||| |||||||||||||| |||||    
T  23861464 acatgattcaatgtaattatatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcatagg 23861368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 28084589 - 28084638
Alignment:
Q  254 gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||| |||||||||||||||||||||||||| | |||||||| |||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgctt 28084638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 40179669 - 40179600
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| |||||||||||| |||||||||| ||||||||  ||| ||||||   ||||||||||||    
T  40179669 acataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgacaccatgacacgcctaat 40179600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 4157462 - 4157542
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| | || ||||| | |||||||||||| ||||||||  |||||||||| | || ||||||||||| ||||||||    
T  4157462 acataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgt 4157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 12797371 - 12797283
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||| |||||||| | |||||||||||| |||||| |  |||| ||||| |||||| | ||||| | |||| |||||||||||    
T  12797371 acataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgctt 12797283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 21945529 - 21945609
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||||| |||||||| | |||||||||||| ||| ||||  |||||||||| |  ||||||||||| | ||||||||    
T  21945529 acataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgt 21945609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 309
Target Start/End: Complemental strand, 4672118 - 4672024
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| ||||  ||||||||||||||||| | || | | |||| ||||||||| ||| | ||||| ||||||||||  |||||| |||||    
T  4672118 acataattcagtgtagctatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcatagg 4672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 35161062 - 35161156
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| |||||||||| || || | |||| |||||||| ||||||||||| || |||| |||||| | |  ||||| ||||||| |||||    
T  35161062 acataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatagg 35161156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 903984 - 904021
Alignment:
Q  240 tcggtgtcgaacacgacatgtgtccgacactgggacac 277  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  903984 tcggtgttggacacgacatgtgtccgacactgggacac 904021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 9996866 - 9996935
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||||| | ||||||||||| ||||||||  |||  ||| |||||||||||||| |||| ||||||    
T  9996866 acataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacactggaacacacctaat 9996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 35158018 - 35157925
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||||||||| |||||||||||  ||||||||  ||||| |||| || |||||| |||| | || ||||| ||||||| ||||    
T  35158018 acataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 35723417 - 35723384
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||||||||||||||||||||| ||||||    
T  35723417 acataattcaatgtaattatatgtgtcagtgtcg 35723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 40006029 - 40006098
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    ||||||||  |||||||||||| ||||| | ||||||||||||  ||||||| || | ||||||||||||    
T  40006029 acataattttatgtaattatatatgtcgatatcgaacacgacacatgtccgataccgagacacgcctaat 40006098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 46715507 - 46715418
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacac-gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||||||||| |||||| |||| |||||| |||| | |  ||||||||||| || ||| | ||||| | ||||||||||||||||    
T  46715507 acataattcaatgtagttatatttgtctgtgtcggacactgccgcgtgtccgacaccggcacatgtctaatccgaggagtgttcgtgctt 46715418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 243 - 303
Target Start/End: Complemental strand, 3947766 - 3947706
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||| |||||||| |||||||||||  |||||| |||||| | |||||||| |||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgctt 3947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 4157175 - 4157255
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| | || ||||| | |||||||||||| ||||||||  |||||||||| | || || |||||||| ||||||||    
T  4157175 acataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgt 4157255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 20633555 - 20633591
Alignment:
Q  273 gacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| |||||||||||||||||| |||||    
T  20633555 gacacgcctaatccaaggagtgttcgtgcttcatagg 20633591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 22234890 - 22234818
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||  |||||||| |||||||||||  ||||||  ||||| | || ||||||||||||| |||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatagg 22234818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 22440606 - 22440562
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||| ||||||||||||| | |||||||| |||||||    
T  22440606 gtgtccgacactaggacacgcctaatccgaggagtgtccgtgctt 22440562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 36409545 - 36409505
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacga 255  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  36409545 acataatttagtgtaattataggtgtcggtgtcgaacacga 36409505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 36423711 - 36423671
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacga 255  Q
    |||||||| | |||||||||| |||||||||||||||||||    
T  36423711 acataatttagtgtaattataggtgtcggtgtcgaacacga 36423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 70303 - 70392
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||||| |||||||||| |||||||||||| |||||||| |||||||||||  ||||| ||||||| | | ||||||||||||||    
T  70303 aacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgctt 70392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 14134725 - 14134810
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 300  Q
    |||||||||| ||||||||||| |||||||||| ||||||||| ||||||| |||  ||||||||||||||| |||||||| ||||    
T  14134725 acataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtg 14134810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 43737833 - 43737756
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||||||||||||||||| |||||||| ||||| ||||| |||| |||||| || |||||||||| |||||||    
T  43737833 tgtaattatatgtgtcggtgtcggacacgacaggtgtctgacacggggatacgccttatccaaggagtgtccgtgctt 43737756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 22652035 - 22652106
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||||||||||||||| |||||||| ||||| | |||||||| ||||||| ||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 5813640 - 5813706
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||| |||||||| ||||||||||| |||||||||||||||  |||||||| |||||||    
T  5813640 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgctt 5813706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 18407745 - 18407839
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| |||||||| | |||||| || || ||||||||  ||||||||||| ||||||||||||||  |||||||| ||||||| |||||    
T  18407745 acataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatagg 18407839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 126382 - 126295
Alignment:
Q  213 aaacataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtg 300  Q
    ||||| |||| |||||||||||||||||| |||||| |||||||| |||||| | || |||||||| ||||| | |||||||| ||||    
T  126382 aaacacaattaaatgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 33405417 - 33405330
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgct 302  Q
    |||||||| | ||||||||||||||||||||||| ||||||||  |||| |||||  ||||||| ||||| ||| |||||| ||||||    
T  33405417 acataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgct 33405330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 34451032 - 34450961
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| ||||||| ||||    
T  34451032 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 3951558 - 3951476
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| |||||||||||||||||  |||||||| ||||| ||||| || ||||||||||| |||||||| | ||||||| ||||    
T  3951558 tgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 4786371 - 4786278
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| ||||||||||||||||||||||| | ||||||||||| ||| |  | |||| | || |||||| |||||| ||||||| ||||    
T  4786371 acataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcatag 4786278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 29447109 - 29447044
Alignment:
Q  238 tgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    ||||||||||| |||||||||||||| |||||  ||||||||||||| | |||||||| |||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgctt 29447044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 29510304 - 29510232
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| |||||||  ||||||||||| ||||||| |||||| | |||||||| ||||||| |||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagg 29510232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 22204713 - 22204764
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 310  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||||||||    
T  22204713 gtgtccgacactgagacacgtctaatccaaggagtgttcatgctttatagga 22204764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 36450836 - 36450694
Alignment:
Q  172 acggacatggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccg 265  Q
    ||||||| ||||||||| || || ||||  ||||||||||||||      || |||||| |||||||| | |||| ||||||| |||||||  |||||||    
T  36450836 acggacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccg 36450737  T
Q  266 acactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||  ||||||||||||| | ||||||||  |||||| ||||    
T  36450736 acaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 926815 - 926733
Alignment:
Q  221 ttcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||| |||||||||| |||||||||||| || ||||| ||||||||||| |||||| || | || | |||||||| |||||||    
T  926815 ttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgctt 926733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 9097908 - 9097854
Alignment:
Q  194 caacaccgctaataatttgaaacataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||| | ||||||||||| |||||||||||| |||||||||||| ||||||||    
T  9097908 caacactggtaataatttgagacataattcaatataattatatgtgccggtgtcg 9097854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 13397622 - 13397671
Alignment:
Q  260 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| | ||||||||||||||||||||||| ||||||| |||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatagg 13397671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 31556977 - 31557102
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa-----cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacac 269  Q
    ||||||| |||||| || || |||| | |||||||||||||     ||||||||| |||||||| | || ||||||||  ||||||||  ||||||||||    
T  31556977 gacatggtcactgacacgccgacacagttaataatttgaaaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacac 31557076  T
Q  270 tgggacacgcctaattcaaggagtgt 295  Q
      ||||||||||||| ||||| ||||    
T  31557077 caggacacgcctaatccaaggtgtgt 31557102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 6065650 - 6065586
Alignment:
Q  244 tgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||| ||||||||  |||||||||| || |||||| ||||||||||||||| ||||||| ||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 31236610 - 31236570
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacga 255  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  31236610 acataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 246
Target Start/End: Original strand, 18964203 - 18964234
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgt 246  Q
    ||||||||||||||||||||||||||||||||    
T  18964203 acataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 28745557 - 28745628
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||| ||||||||  |||||| ||| | |||| | |||||||||||||||| ||||||| ||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||||  |||||||||||||||||||| |||||| | |||||   |||||||| ||||||| ||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 11944737 - 11944795
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||| |||||||| | |||||||||||| | | |||||||||||||| ||||    
T  11944737 acacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 247
Target Start/End: Complemental strand, 12606860 - 12606830
Alignment:
Q  217 ataattcaatgtaattatatgtgtcggtgtc 247  Q
    |||||||||||||||||||||||||||||||    
T  12606860 ataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 20679428 - 20679362
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcct 281  Q
    ||||| |||| |||||||||| |||||||||||  || | ||| ||||||||||| |||||||||||    
T  20679428 acatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgcct 20679362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 30068023 - 30067965
Alignment:
Q  253 cgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttataggac 311  Q
    |||| |||||||||||||||||||| |||||| | | |||||| ||||||| |||||||    
T  30068023 cgacgtgtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcataggac 30067965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 252
Target Start/End: Complemental strand, 5138865 - 5138828
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaaca 252  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  5138865 acataattcaatgtaatcatatgtgccggtgtcgaaca 5138828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 8293854 - 8293931
Alignment:
Q  218 taattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    ||||||| |||||||||||||||||||||| |||| ||||  | || |||||  |||||| |||||| | ||||||||    
T  8293854 taattcagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Original strand, 8847282 - 8847315
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  8847282 acataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 11927119 - 11927086
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  11927119 acataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 309
Target Start/End: Original strand, 13403177 - 13403226
Alignment:
Q  260 tgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||| | ||||||| ||||||||||||||| ||||||| |||||    
T  13403177 tgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatagg 13403226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 22943347 - 22943302
Alignment:
Q  250 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgt 295  Q
    |||||||| ||||||||||| |||||||||||||| | ||||||||    
T  22943347 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 22943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 24858070 - 24858135
Alignment:
Q  243 gtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||| ||||||||||||||| || | ||||||||||||||   ||||||||| |||||| ||||    
T  24858070 gtgtcggacacgacatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcatag 24858135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 26902208 - 26902175
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||| |||||||||||||||||||||||    
T  26902208 acataattcagtgtaattatatgtgtcggtgtcg 26902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 44462224 - 44462159
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||| |||| |||||||||||||||  |||||| |  |||||||||| |||||||| |||||    
T  44462224 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaat 44462159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 44469757 - 44469692
Alignment:
Q  219 aattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaat 284  Q
    |||||||| |||| |||||||||||||||  |||||| |  |||||||||| |||||||| |||||    
T  44469757 aattcaatttaatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaat 44469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 44067597 - 44067641
Alignment:
Q  259 gtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||  ||||||||||||||| |||||||| |||||||    
T  44067597 gtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 44067641  T

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Target: scaffold0380 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 8634 - 8721
Alignment:
Q  222 tcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||||||   ||||| |||| |||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||| |||||    
T  8634 tcaatgtaattactcgtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatagg 8721  T

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Target: scaffold0652 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 536 - 407
Alignment:
Q  180 ggacactgatacaccaacaccgctaataatttgaaa------cataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactggg 273  Q
    |||||||||||| || |||| |||||||||||||||      || |||||| |||||||| | |||||||||||| |||||||  ||||||||||| |||    
T  536 ggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccggg 437  T
Q  274 acacgcctaattcaaggagtgttcgtgctt 303  Q
    |||| |||||| | |||||||| |||||||    
T  436 acacacctaatccgaggagtgtccgtgctt 407  T

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Target: scaffold0450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 8635 - 8564
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| ||| |||||| | |||||||||||||| ||||||||||||| |||||||| ||||||| ||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 45563 - 45470
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||||||||||| |||||||| ||||| ||||| | |||| ||||||| ||| || ||| ||||||| ||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatag 45470  T

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Target: scaffold0793 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 4916 - 4821
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtc--gaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||| ||||||  | ||||||||  |||||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  4916 acataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 308
Target Start/End: Original strand, 14556 - 14646
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||||| |||||||| | |||   |||||| |||||||| ||||||||||| | ||||||||||||  ||||||||| ||||||| ||||    
T  14556 acataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 8778 - 8893
Alignment:
Q  175 gacatggacactgatacaccaacaccgctaataatttgaaa----cata--attcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgaca 268  Q
    |||| ||||||||| || || |||| |||||||||||||||    ||||  ||| | |||||||| | |||||||||||| |||||||| ||||||||||    
T  8778 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 8877  T
Q  269 ctgggacacgcctaat 284  Q
    | | ||||||||||||    
T  8878 ccgagacacgcctaat 8893  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||| ||||||| |||||||| ||||||||||| |||||||||||||| | || ||||| ||||||| ||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 5058 - 4976
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    |||||||| | |||||||||||| |||||||| |||||||||| || |||| ||||||| | ||||||||  |||||| ||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 13454 - 13520
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||| |||||||| | ||| |||||| |||||| |||||| |||||||||| |||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgctt 13520  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 21873 - 21807
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctt 303  Q
    |||||||||||| |||||||| | ||| |||||| |||||| |||||| |||||||||| |||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgctt 21807  T

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Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 5993 - 5932
Alignment:
Q  240 tcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||||||||| ||||| ||||| | ||||||||| || |||||||||| |||||    
T  5993 tcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggagtgtccgtgc 5932  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 23573 - 23642
Alignment:
Q  240 tcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    ||||||||| |||||| |||||||||| |||||||||||| |||| | || |||||| |||||| |||||    
T  23573 tcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgcttcatagg 23642  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 174586 - 174493
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||  ||||||| |  ||||||||| | ||||| |||||||||||||  || ||||||||||| |||||| ||||||| ||| ||||    
T  174586 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 174493  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 308
Target Start/End: Complemental strand, 180099 - 180006
Alignment:
Q  215 acataattcaatgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatag 308  Q
    ||||||||||  ||||||| |  ||||||||| | ||||| |||||||||||||  || ||||||||||| |||||| ||||||| ||| ||||    
T  180099 acataattcagcgtaattacaaatgtcggtgttggacacgtcatgtgtccgacatcggaacacgcctaatccaaggaatgttcgtacttcatag 180006  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 3345 - 3429
Alignment:
Q  226 tgtaattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagga 310  Q
    |||||||| | ||||| |||||| ||| |||| |||   |||||||||||||||||||| | |||||||| ||||||| ||||||    
T  3345 tgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatagga 3429  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 248
Target Start/End: Original strand, 6339 - 6371
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgtcg 248  Q
    |||||||||||||||||||||||||||||||||    
T  6339 cataattcaatgtaattatatgtgtcggtgtcg 6371  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 309
Target Start/End: Original strand, 71784 - 71856
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgctttatagg 309  Q
    |||||||||||| |||| ||| ||||||||||| |||||||| ||||| | ||||||||  |||||| |||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatagg 71856  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 92773 - 92825
Alignment:
Q  161 atctatgaagcacggacatggacactgatacaccaacaccgctaataatttga 213  Q
    |||||||||||||||| | ||||||||| || || ||||||||||||||||||    
T  92773 atctatgaagcacggatacggacactgacacgccgacaccgctaataatttga 92825  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 1683 - 1733
Alignment:
Q  228 taattatatgtgtcggtgtcgaacacgacatgtgtccgacactgggacacg 278  Q
    |||||||| |||||||||||| ||||||||  ||||||||||| |||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 246
Target Start/End: Original strand, 28877 - 28907
Alignment:
Q  216 cataattcaatgtaattatatgtgtcggtgt 246  Q
    |||||||||||||||||||||||||||||||    
T  28877 cataattcaatgtaattatatgtgtcggtgt 28907  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 99918 - 99952
Alignment:
Q  214 aacataattcaatgtaattatatgtgtcggtgtcg 248  Q
    ||||||||||||||||||||||||||| |||||||    
T  99918 aacataattcaatgtaattatatgtgttggtgtcg 99952  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  237 gtgtcggtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgc 301  Q
    |||||||||||| ||| |||| ||||||||||| ||||||||  |||| |||| ||||| |||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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