View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13931_low_7 (Length: 321)
Name: NF13931_low_7
Description: NF13931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13931_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 1 - 306
Target Start/End: Original strand, 6390367 - 6390672
Alignment:
| Q |
1 |
cacttacatcggcagtggaatttgaactcaaaactttataggatgtgagctgaatccttaccaattcaattaaacctaagttggcatacaaattggtatt |
100 |
Q |
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| T |
6390367 |
cacttacatcggcagtggaatttgaactcaaaactttataggatgtgagctgaatccttaccaattcgattaaacctaagttggcatacaaaatggtatt |
6390466 |
T |
|
| Q |
101 |
tagcaacgaaaatagcaagtaataagtgataataagttatgattgatgtattaattgtgcaaaagatgaaagtggggttgtggcagtgtactgttgtttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6390467 |
tagcaacgaaaatagcaagtaataagtgataataagttatgattgatgtattaattgtgcaaaagatgaaagtggggttgtggcagtgtactgttgtttc |
6390566 |
T |
|
| Q |
201 |
ttatggttgcaccaatatcatgcattgaagccccacctcgtgggaagcatgttatgaaggtatacaattaaaggtacaacaatgtctaagttcacatgga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6390567 |
ttatggttgcaccaatatcatgcattgaagccccacctcgtgggaagcatgttatgaaggtatacaattaaaggtacaacaatgtctaagttcacatgga |
6390666 |
T |
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| Q |
301 |
ctaact |
306 |
Q |
| |
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|||||| |
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| T |
6390667 |
ctaact |
6390672 |
T |
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