View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13935_low_7 (Length: 283)

Name: NF13935_low_7
Description: NF13935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13935_low_7
NF13935_low_7
[»] chr2 (59 HSPs)
chr2 (1-265)||(7028891-7029152)
chr2 (1-265)||(7042265-7042527)
chr2 (1-77)||(12342091-12342167)
chr2 (1-113)||(34546410-34546522)
chr2 (1-77)||(43427366-43427442)
chr2 (1-120)||(16807596-16807715)
chr2 (1-120)||(16846877-16846996)
chr2 (3-77)||(43971502-43971576)
chr2 (1-77)||(441310-441386)
chr2 (1-77)||(13561992-13562068)
chr2 (1-77)||(29396759-29396835)
chr2 (1-77)||(36177974-36178050)
chr2 (1-77)||(45301763-45301839)
chr2 (1-76)||(27964449-27964524)
chr2 (7-77)||(4133022-4133092)
chr2 (1-74)||(14285939-14286012)
chr2 (1-74)||(45081979-45082052)
chr2 (1-77)||(4658312-4658388)
chr2 (1-77)||(6220483-6220559)
chr2 (1-77)||(8540036-8540112)
chr2 (1-77)||(12566059-12566135)
chr2 (1-77)||(18579165-18579241)
chr2 (1-69)||(18719511-18719579)
chr2 (1-77)||(22620413-22620489)
chr2 (1-77)||(25383564-25383639)
chr2 (1-121)||(32228090-32228210)
chr2 (1-121)||(12394000-12394121)
chr2 (1-70)||(16463111-16463180)
chr2 (14-120)||(16792439-16792544)
chr2 (1-70)||(42004896-42004965)
chr2 (1-77)||(17695904-17695980)
chr2 (1-77)||(35799201-35799276)
chr2 (1-77)||(38926604-38926680)
chr2 (5-77)||(777768-777842)
chr2 (1-77)||(4051782-4051859)
chr2 (1-114)||(4469462-4469575)
chr2 (12-120)||(5717468-5717576)
chr2 (1-77)||(15083231-15083307)
chr2 (1-77)||(29411694-29411770)
chr2 (1-77)||(29808810-29808886)
chr2 (1-77)||(36685819-36685895)
chr2 (1-111)||(7874723-7874832)
chr2 (1-75)||(30855105-30855178)
chr2 (1-77)||(37038848-37038921)
chr2 (17-75)||(45423618-45423676)
chr2 (1-70)||(7644651-7644720)
chr2 (1-74)||(9391637-9391710)
chr2 (1-74)||(19164358-19164431)
chr2 (1-77)||(4288790-4288866)
chr2 (1-77)||(35046516-35046592)
chr2 (23-77)||(17703017-17703071)
chr2 (1-74)||(11188571-11188644)
chr2 (1-77)||(33482308-33482384)
chr2 (178-225)||(7034375-7034422)
chr2 (7-77)||(10195572-10195642)
chr2 (1-77)||(43480948-43481026)
chr2 (24-77)||(14833837-14833890)
chr2 (88-120)||(40987422-40987454)
chr2 (88-120)||(45081818-45081850)
[»] chr1 (63 HSPs)
chr1 (1-122)||(15822986-15823108)
chr1 (1-77)||(29567894-29567970)
chr1 (1-77)||(9915441-9915517)
chr1 (1-77)||(32807015-32807091)
chr1 (1-77)||(50249308-50249384)
chr1 (1-72)||(50094232-50094303)
chr1 (1-120)||(34047312-34047433)
chr1 (1-122)||(48025331-48025453)
chr1 (1-77)||(16757271-16757347)
chr1 (1-77)||(49468788-49468864)
chr1 (1-122)||(5463528-5463649)
chr1 (1-110)||(10842745-10842854)
chr1 (4-77)||(38531377-38531450)
chr1 (1-77)||(12484705-12484781)
chr1 (1-77)||(12591159-12591235)
chr1 (1-77)||(26352158-26352234)
chr1 (1-120)||(26755174-26755293)
chr1 (1-77)||(34032157-34032233)
chr1 (1-73)||(40717373-40717445)
chr1 (1-77)||(44108597-44108673)
chr1 (1-113)||(46554761-46554872)
chr1 (1-70)||(25487093-25487162)
chr1 (1-110)||(27208954-27209063)
chr1 (1-122)||(44557121-44557242)
chr1 (1-77)||(1740718-1740794)
chr1 (1-73)||(24611597-24611669)
chr1 (1-77)||(31491847-31491923)
chr1 (1-77)||(35848010-35848086)
chr1 (5-77)||(44258588-44258660)
chr1 (1-77)||(52024311-52024387)
chr1 (1-77)||(52125213-52125289)
chr1 (1-77)||(15573605-15573685)
chr1 (13-120)||(24483343-24483450)
chr1 (1-76)||(26595146-26595221)
chr1 (1-112)||(46045936-46046047)
chr1 (1-76)||(49402948-49403023)
chr1 (3-69)||(25151821-25151887)
chr1 (1-70)||(14373490-14373559)
chr1 (1-70)||(24884420-24884489)
chr1 (1-70)||(46286895-46286964)
chr1 (1-121)||(27720912-27721032)
chr1 (3-67)||(34110535-34110599)
chr1 (1-77)||(43358277-43358353)
chr1 (1-77)||(48009008-48009084)
chr1 (10-69)||(14593406-14593465)
chr1 (3-77)||(30292938-30293012)
chr1 (1-75)||(46271394-46271468)
chr1 (9-77)||(13408350-13408418)
chr1 (1-77)||(18794619-18794694)
chr1 (1-77)||(31798587-31798663)
chr1 (1-77)||(25560949-25561026)
chr1 (13-70)||(33622454-33622511)
chr1 (1-121)||(2610907-2611027)
chr1 (1-77)||(39477785-39477860)
chr1 (1-76)||(49426492-49426565)
chr1 (5-76)||(39125647-39125718)
chr1 (1-44)||(43759363-43759406)
chr1 (1-76)||(52066366-52066440)
chr1 (88-121)||(50094180-50094213)
chr1 (1-77)||(7191284-7191360)
chr1 (88-120)||(26352002-26352034)
chr1 (88-120)||(31491680-31491712)
chr1 (88-120)||(52125046-52125078)
[»] chr8 (46 HSPs)
chr8 (1-122)||(39698745-39698866)
chr8 (1-113)||(4989440-4989552)
chr8 (1-77)||(39463257-39463333)
chr8 (1-124)||(9304712-9304836)
chr8 (1-77)||(15160525-15160601)
chr8 (1-120)||(43448671-43448790)
chr8 (1-74)||(35356308-35356381)
chr8 (1-113)||(4760637-4760749)
chr8 (1-77)||(6374412-6374487)
chr8 (1-77)||(7839456-7839532)
chr8 (1-77)||(29025825-29025901)
chr8 (1-120)||(31693700-31693820)
chr8 (1-77)||(40228572-40228648)
chr8 (1-70)||(43084706-43084775)
chr8 (1-113)||(9880580-9880692)
chr8 (1-77)||(17920954-17921030)
chr8 (1-77)||(19438234-19438310)
chr8 (1-77)||(37559612-37559688)
chr8 (1-77)||(39765939-39766014)
chr8 (1-77)||(40362433-40362509)
chr8 (1-77)||(44713532-44713608)
chr8 (1-72)||(5295485-5295556)
chr8 (1-120)||(15227522-15227641)
chr8 (1-70)||(514879-514948)
chr8 (1-70)||(13496240-13496309)
chr8 (1-70)||(29312272-29312341)
chr8 (1-77)||(9812171-9812247)
chr8 (1-77)||(45358973-45359049)
chr8 (19-74)||(43974888-43974943)
chr8 (1-77)||(396293-396369)
chr8 (9-114)||(14234305-14234410)
chr8 (1-77)||(19574384-19574461)
chr8 (1-77)||(13368027-13368103)
chr8 (1-77)||(17655906-17655981)
chr8 (1-69)||(31899327-31899395)
chr8 (1-77)||(34796757-34796833)
chr8 (8-77)||(6116091-6116160)
chr8 (1-70)||(36921362-36921431)
chr8 (1-77)||(43724379-43724456)
chr8 (1-50)||(34156559-34156609)
chr8 (40-77)||(32414725-32414762)
chr8 (86-123)||(34156482-34156519)
chr8 (1-50)||(44342865-44342914)
chr8 (1-77)||(2375920-2375996)
chr8 (88-120)||(8382399-8382431)
chr8 (89-121)||(43724716-43724748)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-120)||(24819-24939)
[»] chr5 (46 HSPs)
chr5 (2-77)||(2729866-2729941)
chr5 (1-77)||(7317026-7317102)
chr5 (1-77)||(10345011-10345087)
chr5 (1-77)||(13761555-13761631)
chr5 (1-77)||(21319389-21319465)
chr5 (1-77)||(39566181-39566257)
chr5 (1-77)||(42104142-42104218)
chr5 (1-74)||(14620573-14620646)
chr5 (1-77)||(3025010-3025086)
chr5 (1-77)||(6518974-6519050)
chr5 (1-77)||(26660753-26660829)
chr5 (1-77)||(26932346-26932422)
chr5 (1-77)||(34446106-34446182)
chr5 (1-123)||(3306088-3306210)
chr5 (1-70)||(27797786-27797855)
chr5 (1-70)||(36164892-36164961)
chr5 (1-77)||(25362879-25362955)
chr5 (1-74)||(21195380-21195453)
chr5 (1-77)||(36073709-36073785)
chr5 (5-120)||(4911233-4911348)
chr5 (19-74)||(39729960-39730015)
chr5 (1-123)||(27600351-27600473)
chr5 (1-77)||(34208973-34209052)
chr5 (1-77)||(39504720-39504797)
chr5 (1-77)||(7579948-7580024)
chr5 (13-77)||(24280991-24281055)
chr5 (13-77)||(24381157-24381221)
chr5 (1-73)||(35765979-35766051)
chr5 (1-76)||(38362216-38362291)
chr5 (1-74)||(8336488-8336561)
chr5 (3-76)||(15167092-15167164)
chr5 (1-77)||(43584455-43584532)
chr5 (1-73)||(11977590-11977662)
chr5 (1-113)||(21375730-21375842)
chr5 (1-77)||(38369871-38369946)
chr5 (1-70)||(34534365-34534433)
chr5 (1-77)||(843019-843092)
chr5 (1-70)||(4630870-4630939)
chr5 (1-77)||(9066502-9066578)
chr5 (1-56)||(14005911-14005966)
chr5 (1-39)||(39335283-39335321)
chr5 (88-122)||(39730155-39730189)
chr5 (88-121)||(36296298-36296331)
chr5 (1-70)||(42662019-42662087)
chr5 (1-70)||(29807394-29807465)
chr5 (88-124)||(33741862-33741898)
[»] chr7 (56 HSPs)
chr7 (1-120)||(22297952-22298070)
chr7 (1-124)||(45948707-45948832)
chr7 (1-113)||(1741953-1742065)
chr7 (1-70)||(10476141-10476210)
chr7 (1-113)||(715940-716052)
chr7 (1-77)||(24680126-24680202)
chr7 (1-77)||(12977763-12977839)
chr7 (1-77)||(13405204-13405280)
chr7 (1-77)||(42285906-42285982)
chr7 (1-77)||(42880011-42880087)
chr7 (1-70)||(27947578-27947647)
chr7 (1-113)||(37815685-37815798)
chr7 (4-113)||(41137690-41137799)
chr7 (1-77)||(19105078-19105154)
chr7 (1-77)||(23935420-23935495)
chr7 (1-69)||(29531012-29531080)
chr7 (1-77)||(31418590-31418666)
chr7 (1-77)||(34274792-34274868)
chr7 (2-73)||(21752189-21752260)
chr7 (1-72)||(48684726-48684797)
chr7 (1-120)||(8603928-8604049)
chr7 (1-123)||(34012114-34012235)
chr7 (13-113)||(10599175-10599275)
chr7 (1-77)||(18292333-18292409)
chr7 (1-77)||(24133207-24133283)
chr7 (1-77)||(36807933-36808009)
chr7 (1-77)||(37490782-37490858)
chr7 (1-73)||(37502321-37502393)
chr7 (1-69)||(44453141-44453209)
chr7 (1-63)||(25440884-25440946)
chr7 (3-77)||(35777817-35777891)
chr7 (1-73)||(18270579-18270652)
chr7 (1-113)||(40339420-40339532)
chr7 (1-70)||(40753505-40753574)
chr7 (1-77)||(1031153-1031229)
chr7 (1-77)||(45499904-45499980)
chr7 (1-70)||(30312463-30312532)
chr7 (1-70)||(31929937-31930006)
chr7 (1-77)||(6747225-6747300)
chr7 (1-77)||(33939811-33939887)
chr7 (27-75)||(40927163-40927211)
chr7 (1-77)||(42753706-42753781)
chr7 (1-77)||(44567118-44567194)
chr7 (22-77)||(2297036-2297091)
chr7 (1-77)||(45933665-45933737)
chr7 (19-77)||(24780401-24780459)
chr7 (1-70)||(6563491-6563560)
chr7 (38-110)||(16565214-16565286)
chr7 (38-110)||(16600376-16600448)
chr7 (1-77)||(27935765-27935841)
chr7 (9-77)||(48843550-48843618)
chr7 (1-71)||(28289219-28289288)
chr7 (88-122)||(36915578-36915612)
chr7 (88-120)||(5723195-5723227)
chr7 (88-120)||(10599572-10599604)
chr7 (1-77)||(33682527-33682603)
[»] scaffold0565 (2 HSPs)
scaffold0565 (1-77)||(9720-9796)
scaffold0565 (3-77)||(10035-10110)
[»] chr4 (65 HSPs)
chr4 (1-77)||(10573237-10573313)
chr4 (1-77)||(19451294-19451370)
chr4 (1-77)||(24940877-24940953)
chr4 (1-77)||(52957873-52957949)
chr4 (1-120)||(1819517-1819636)
chr4 (1-77)||(19930712-19930788)
chr4 (1-77)||(40345430-40345506)
chr4 (1-124)||(45043671-45043795)
chr4 (4-123)||(19878600-19878719)
chr4 (1-121)||(30261212-30261333)
chr4 (1-77)||(2493100-2493176)
chr4 (1-73)||(2728481-2728553)
chr4 (1-77)||(22220442-22220518)
chr4 (1-77)||(52848137-52848213)
chr4 (10-77)||(4505335-4505402)
chr4 (5-72)||(39982106-39982173)
chr4 (1-120)||(50203032-50203148)
chr4 (1-111)||(29519608-29519718)
chr4 (1-77)||(20448037-20448113)
chr4 (1-77)||(37624554-37624630)
chr4 (1-77)||(41920392-41920468)
chr4 (1-77)||(44571948-44572024)
chr4 (1-77)||(47817736-47817812)
chr4 (1-74)||(7906079-7906152)
chr4 (1-77)||(52253843-52253922)
chr4 (1-77)||(25231173-25231249)
chr4 (1-77)||(34413630-34413706)
chr4 (1-77)||(37654408-37654483)
chr4 (1-77)||(49080560-49080635)
chr4 (1-77)||(52915625-52915701)
chr4 (1-70)||(21864466-21864535)
chr4 (1-70)||(21920327-21920396)
chr4 (1-77)||(27943628-27943705)
chr4 (1-70)||(34316227-34316296)
chr4 (1-77)||(41496203-41496279)
chr4 (1-77)||(50623081-50623157)
chr4 (1-77)||(51733577-51733653)
chr4 (1-77)||(54042266-54042342)
chr4 (27-77)||(40837128-40837178)
chr4 (1-77)||(40010956-40011033)
chr4 (1-77)||(31917954-31918030)
chr4 (1-69)||(45839643-45839711)
chr4 (1-113)||(46392144-46392256)
chr4 (1-77)||(53814580-53814656)
chr4 (1-64)||(25123809-25123872)
chr4 (3-77)||(49089462-49089535)
chr4 (1-70)||(6991345-6991413)
chr4 (1-77)||(27653674-27653748)
chr4 (12-77)||(44061006-44061071)
chr4 (1-77)||(8971040-8971116)
chr4 (1-45)||(11364256-11364300)
chr4 (1-41)||(18430023-18430063)
chr4 (1-77)||(24157183-24157259)
chr4 (1-60)||(38510328-38510387)
chr4 (88-123)||(53814410-53814445)
chr4 (1-70)||(620260-620330)
chr4 (88-122)||(37624754-37624788)
chr4 (88-121)||(17499629-17499662)
chr4 (88-121)||(38510171-38510204)
chr4 (1-50)||(38991844-38991893)
chr4 (88-121)||(54042097-54042130)
chr4 (1-70)||(56373660-56373729)
chr4 (3-76)||(56460082-56460155)
chr4 (88-120)||(45889770-45889802)
chr4 (37-77)||(55092567-55092607)
[»] chr3 (59 HSPs)
chr3 (1-113)||(3152882-3152994)
chr3 (1-77)||(11393543-11393619)
chr3 (1-77)||(30426400-30426476)
chr3 (1-77)||(48901718-48901794)
chr3 (1-77)||(48903284-48903360)
chr3 (1-120)||(38016330-38016448)
chr3 (1-77)||(47895420-47895496)
chr3 (1-72)||(36729886-36729957)
chr3 (1-113)||(4392157-4392270)
chr3 (1-77)||(4758989-4759065)
chr3 (1-77)||(42071983-42072059)
chr3 (1-77)||(42571605-42571681)
chr3 (1-77)||(44676219-44676295)
chr3 (1-77)||(45213798-45213874)
chr3 (1-122)||(50646186-50646308)
chr3 (1-122)||(2457960-2458081)
chr3 (1-121)||(51397963-51398084)
chr3 (1-77)||(32492257-32492333)
chr3 (1-109)||(33194107-33194215)
chr3 (1-77)||(41850388-41850464)
chr3 (1-77)||(50038247-50038323)
chr3 (1-76)||(36460805-36460880)
chr3 (1-74)||(30431121-30431194)
chr3 (1-74)||(40487829-40487902)
chr3 (1-77)||(19373584-19373660)
chr3 (1-77)||(30315307-30315383)
chr3 (1-77)||(47137961-47138037)
chr3 (1-77)||(50088392-50088468)
chr3 (19-77)||(19115385-19115443)
chr3 (1-49)||(27067634-27067682)
chr3 (1-77)||(39356883-39356959)
chr3 (1-76)||(7230972-7231047)
chr3 (1-76)||(38140949-38141024)
chr3 (1-77)||(30934885-30934958)
chr3 (19-77)||(42886749-42886807)
chr3 (1-70)||(9189511-9189580)
chr3 (1-70)||(33024376-33024445)
chr3 (1-113)||(36844818-36844931)
chr3 (1-77)||(41287572-41287651)
chr3 (1-77)||(11019902-11019978)
chr3 (1-77)||(22857088-22857164)
chr3 (5-77)||(50346624-50346695)
chr3 (13-77)||(53200768-53200832)
chr3 (3-77)||(35557836-35557910)
chr3 (1-120)||(38363740-38363865)
chr3 (21-77)||(23208387-23208441)
chr3 (1-50)||(23525392-23525441)
chr3 (1-113)||(31583510-31583623)
chr3 (1-77)||(31853638-31853714)
chr3 (1-73)||(45460665-45460737)
chr3 (15-69)||(52654310-52654364)
chr3 (40-77)||(42939967-42940004)
chr3 (88-120)||(27027687-27027719)
chr3 (88-120)||(30186328-30186360)
chr3 (88-120)||(38364000-38364032)
chr3 (87-115)||(43599465-43599493)
chr3 (1-77)||(47823527-47823603)
chr3 (42-74)||(48169448-48169480)
chr3 (2-70)||(54403341-54403409)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-73)||(18334-18405)
[»] chr6 (31 HSPs)
chr6 (1-77)||(234032-234108)
chr6 (1-73)||(19674982-19675054)
chr6 (1-73)||(29713485-29713557)
chr6 (1-77)||(4850574-4850650)
chr6 (1-77)||(23259404-23259480)
chr6 (1-77)||(29399944-29400020)
chr6 (1-124)||(24163793-24163916)
chr6 (1-122)||(32429238-32429358)
chr6 (1-123)||(32193653-32193776)
chr6 (1-76)||(13503925-13504002)
chr6 (4-77)||(12063592-12063665)
chr6 (1-77)||(18737169-18737245)
chr6 (1-110)||(10520718-10520827)
chr6 (1-77)||(31443524-31443601)
chr6 (1-77)||(9940646-9940722)
chr6 (3-74)||(8030643-8030714)
chr6 (3-113)||(10540590-10540700)
chr6 (1-56)||(34513682-34513737)
chr6 (1-77)||(3988822-3988896)
chr6 (1-70)||(24556007-24556076)
chr6 (4-77)||(31233707-31233780)
chr6 (1-73)||(12459397-12459469)
chr6 (1-48)||(19689357-19689404)
chr6 (35-77)||(17552358-17552400)
chr6 (1-73)||(12322965-12323035)
chr6 (1-41)||(1134959-1134999)
chr6 (19-76)||(1502836-1502893)
chr6 (1-46)||(17267686-17267731)
chr6 (1-77)||(577059-577135)
chr6 (88-124)||(23936491-23936527)
chr6 (88-120)||(34519292-34519324)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-74)||(3583-3656)
[»] scaffold0332 (1 HSPs)
scaffold0332 (1-77)||(3889-3965)
[»] scaffold2107 (1 HSPs)
scaffold2107 (1-121)||(592-712)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-77)||(1492-1568)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-77)||(62631-62707)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-70)||(650-719)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-121)||(21160-21281)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-70)||(4145-4215)
[»] scaffold0983 (1 HSPs)
scaffold0983 (1-77)||(765-841)
[»] scaffold0010 (1 HSPs)
scaffold0010 (6-77)||(153311-153382)
[»] scaffold0300 (1 HSPs)
scaffold0300 (5-74)||(4566-4635)


Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 7028891 - 7029152
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||    
T  7028891 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaattttttt-gataaatcgacactc 7028989  T
Q  101 attttaaaacggatagagtatattgttatagatnnnnnnnnnttggcagtagaaaatttatttgagggatgaaaatatattaatggaaaaccataacttc 200  Q
    |||||||||||||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7028990 attttaaaacggatggagtatattgttatagataaaaaaa--ttgtcagtagaaaatttatttgagggatgaaaatatattaatggaaaaccataacttc 7029087  T
Q  201 aatgatattttgattcatttgggattatacacatgtaatttaatttaaatggttaatggtaattt 265  Q
     ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  7029088 gatgatattttgattcattttggattatacacaagtaatttaatttaaatggttaatggtaattt 7029152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 7042265 - 7042527
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||        ||||||||| |||||    
T  7042265 attaattgaagggtacatttaaaaagaaaaagtcattattgcattgggaagtgaaaatgacattcattttgaaacaattttttt-gataaaacggcactc 7042363  T
Q  101 attttaaaacggatagagtatattgttatagatnnnnnnnnnttggcagtagaaaatttatttgagggatgaaaatatattaatggaaaaccataacttc 200  Q
    |||||||||||||| ||||||||||||||||||         ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7042364 attttaaaacggatggagtatattgttatagataaaaaaaa-ttgtcagtagaaaatttatttgagggatgaaaatatattaatggaaaaccataacttc 7042462  T
Q  201 aatgatattttgattcatttgggattatacacatgtaatttaatttaaatggttaatggtaattt 265  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  7042463 aatgatattttgattcatttgggattatacataagtaatttaatttaaatggttaatggtaattt 7042527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 12342167 - 12342091
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  12342167 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 12342091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 34546410 - 34546522
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| || |||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  34546410 attaattgaagggtacaatttaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttgaaacaatttttttggttaaaacgacactc 34546509  T
Q  101 attttaaaacgga 113  Q
    ||||| |||||||    
T  34546510 attttgaaacgga 34546522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43427366 - 43427442
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  43427366 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 43427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16807596 - 16807715
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| | ||| ||||||| ||||||||||||          |||||||||||||    
T  16807596 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaattttttttattaaaacgacactc 16807695  T
Q  101 attttaaaacggatagagta 120  Q
    ||||||||||||| ||||||    
T  16807696 attttaaaacggagagagta 16807715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16846877 - 16846996
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| | ||| ||||||| ||||||||||||          |||||||||||||    
T  16846877 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaagtgacatttattttgaaacaattttttttattaaaacgacactc 16846976  T
Q  101 attttaaaacggatagagta 120  Q
    ||||||||||||| ||||||    
T  16846977 attttaaaacggagagagta 16846996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 43971576 - 43971502
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  43971576 taattgaagggcacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 43971502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 441310 - 441386
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| |||  |||| ||||||||||||||||||||    
T  441310 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaacagaaagtgacattcattttgaaacaa 441386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13562068 - 13561992
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||| ||||||| ||||||||||||    
T  13562068 attaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacatttattttgaaacaa 13561992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29396759 - 29396835
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  29396759 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 29396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36178050 - 36177974
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  36178050 attaattgaagggtacaattgaaaaaaaaaagttattattgcattggaaacggaaagtgacattcattttgaaacaa 36177974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45301839 - 45301763
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||    
T  45301839 attaattgatgggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 45301763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27964449 - 27964524
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| |||||||||||| ||||||    
T  27964449 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcatttcgaaaca 27964524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 4133092 - 4133022
Alignment:
Q  7 tgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||    
T  4133092 tgaagggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaa 4133022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14286012 - 14285939
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||| |||||||| ||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  14286012 attaattggagggtacaattgaaaaaaaaaagttattattgtattggaaactgaaaatgacattcattttgaaa 14285939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45081979 - 45082052
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||| |||||    
T  45081979 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattgtgaaa 45082052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4658312 - 4658388
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||| ||||| ||| |||||| |||||||||||||||||||    
T  4658312 attaattgaagggtacaattgaaaagaaaaaattattattacattgaaaaatgaaaaagacattcattttgaaacaa 4658388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6220483 - 6220559
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||| ||||||    
T  6220483 attaattgaaaggtacagttgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaa 6220559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8540112 - 8540036
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || |||||||||||| ||||||||| |||||| |||||||| |||||||||| ||||||    
T  8540112 attaattgaagggtacaattaaaaagaaaaagttattattgcactggaaactgaaaatgtcattcattttaaaacaa 8540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12566059 - 12566135
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||| ||||| | |||||||||||||||| ||||| ||||||||||||||||||||    
T  12566059 attaattgaatggtacaattgaaaaaaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 12566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18579241 - 18579165
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| || ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||||||    
T  18579241 attaattgaagggtgcaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaacaa 18579165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18719511 - 18719579
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  18719511 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattt 18719579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22620413 - 22620489
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||  |||| ||||||||||||||    
T  22620413 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagcgacactcattttgaaacaa 22620489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25383564 - 25383639
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||    
T  25383564 attaattgaagg-tacaattgaaaagaaaaagttattattgcattggaaactgaaaataacattcattttaaaacaa 25383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 32228090 - 32228210
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||||||||||  |||||||||||||| |||||||||||  |||   ||| ||||||||||||| ||||||        | |||||||||||||    
T  32228090 attaattgaagggtacaactgaaaagaaaaagttattattgcatttaaaaccaaaagtgacattcattttaaaacaatttattttgctaaaacgacactc 32228189  T
Q  101 attttaaaacggatagagtat 121  Q
    |||||||||||||| ||||||    
T  32228190 attttaaaacggatggagtat 32228210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 12394000 - 12394121
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnng-ataaaacgacact 99  Q
    ||||||||||||||||| || |||| ||||||| ||||||||||| |||| ||||| | ||||||||||||||||||        |  ||||||||||||    
T  12394000 attaattgaagggtacaattaaaaataaaaagttattattgcattagaaactgaaagtaacattcattttgaaacaattttttttgcctaaaacgacact 12394099  T
Q  100 cattttaaaacggatagagtat 121  Q
    |||||| ||||||| |||||||    
T  12394100 cattttgaaacggagagagtat 12394121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16463111 - 16463180
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||| |||||    
T  16463111 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacatttatttt 16463180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 16792544 - 16792439
Alignment:
Q  14 tacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaacgga 113  Q
    |||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||        | |||| |||||||||||||||||||||    
T  16792544 tacaattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa-tttttttgctaaagcgacactcattttaaaacgga 16792446  T
Q  114 tagagta 120  Q
    | |||||    
T  16792445 tggagta 16792439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42004965 - 42004896
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||| ||||| | |||||||||||||||| | |||||||||||||||||    
T  42004965 attaattgaagggtacaattgaaaataaaaaattattattgcattggaaattaaaaatgacattcatttt 42004896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 17695904 - 17695980
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||  ||||||||| ||||| ||||| ||||||||||||||    
T  17695904 attaattggagggtacaattgaaaagaaaaagttattatcacattggaaactgaaagtgacactcattttgaaacaa 17695980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35799276 - 35799201
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||| ||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  35799276 attaattggagggtacaattgaaaa-aaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaa 35799201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38926680 - 38926604
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  38926680 attaattgaagggtacaattgaaaaaaagaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 38926604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 777842 - 777768
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaa--gtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||||| |||||||  || ||||||||||| |||| ||||||||||||||||||| ||||||    
T  777842 attgaagggtacatttgaacagaaaaaaggttattattgcattagaaattgaaaatgacattcattttaaaacaa 777768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4051782 - 4051859
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaag-tcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | |||||| |||||||||||||  | |||||||||||||||| ||||| ||||||||||||||||||||    
T  4051782 attaattggaaggtacaattgaaaagaaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 4051859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 4469575 - 4469462
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||| ||||||||| ||||||||||||||| ||||||| |||| ||| ||||| ||| ||||||||| ||||||        | |||||||||| ||    
T  4469575 attaatttaagggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgaaattcattttaaaacaatgttttttgttaaaacgacattc 4469476  T
Q  101 attttaaaacggat 114  Q
    ||||| ||||||||    
T  4469475 attttgaaacggat 4469462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 5717576 - 5717468
Alignment:
Q  12 ggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaacg 111  Q
    |||||| || |||||||||| | |||||||||||||||| ||||| ||||||||||||| |||||         | |||| |||||||||||||||||||    
T  5717576 ggtacaattaaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttaaaacatttttttttgctaaagcgacactcattttaaaacg 5717477  T
Q  112 gatagagta 120  Q
    ||| |||||    
T  5717476 gatggagta 5717468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15083231 - 15083307
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||| |||| || |||||||||||||||| ||||||| |||||| ||| |||||||    
T  15083231 attaattgaagagtacaattgaaaataaaatgttattattgcattggaaactgaaaataacattcttttcgaaacaa 15083307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29411770 - 29411694
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || ||||||||| || |||||||||||| ||| | ||| ||||||||||||| ||||||    
T  29411770 attaattgaagggtacaattaaaaagaaaaggttattattgcattgaaaactaaaagtgacattcattttaaaacaa 29411694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29808886 - 29808810
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||| ||||||||||  ||||||||||||||| || ||||||||| ||| ||||| ||||||||||||| ||||||    
T  29808886 attaagtgaagggtacgattgaaaagaaaaagttatgattgcattgaaaactgaaagtgacattcattttaaaacaa 29808810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36685819 - 36685895
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||| |||| ||||| | ||||||||||| ||||||    
T  36685819 attaattgaagggtacaattgaaaagaaaaaattattattgtatttgaaattgaaagtaacattcattttaaaacaa 36685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7874723 - 7874832
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||   ||| ||||||| ||||| ||| ||        | |||||||||||||    
T  7874723 attaattgaagggtacgattgaaaagaaaaagttattattgcattggaaa-caaaagtgacattaattttaaaataatttttttaggtaaaacgacactc 7874821  T
Q  101 attttaaaacg 111  Q
    |||||||||||    
T  7874822 attttaaaacg 7874832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30855178 - 30855105
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaac 75  Q
    ||||||| || |||||| ||||||||||||| | |||||||||||||||| ||| | ||||||||||||||||||    
T  30855178 attaattaaatggtacaattgaaaagaaaaatt-attattgcattggaaactgagagtgacattcattttgaaac 30855105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37038848 - 37038921
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | |||||||||||||||   |||||||||| ||| ||||| ||||||||||||| ||||||    
T  37038848 attaattgaagggtataattgaaaagaaaaagt---tattgcattgaaaactgaaagtgacattcattttaaaacaa 37038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 45423676 - 45423618
Alignment:
Q  17 atttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaac 75  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||| ||||    
T  45423676 atttgaaaagaaaaagttattattgcattggaaactgaaaataacaatcattttaaaac 45423618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7644720 - 7644651
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||||| ||||||  |||| | | ||||| |||||||||||||    
T  7644720 attaattgaagggtacaattgaaaagaaaaagttattattatattgaatactgaaagtgacattcatttt 7644651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9391637 - 9391710
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||| ||||  ||| ||||||||||||| | |||||||||||  ||| |||||||||||||||||||||||    
T  9391637 attaattaaaggtcacaattgaaaagaaaaaattattattgcattaaaaactgaaaatgacattcattttgaaa 9391710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19164431 - 19164358
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||||||| |||| || |||||||||||| |||||||||||  ||| ||||| || ||||||||||||||    
T  19164431 attaattgaaggatacaattaaaaagaaaaagttattattgcattaaaaattgaaattgccattcattttgaaa 19164358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4288790 - 4288866
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| ||| || ||||||||||||| | ||||||||||| |||| || || ||| ||||||||||||||||    
T  4288790 attaattgaatggtgcaattgaaaagaaaaaattattattgcattagaaactgtaagtgatattcattttgaaacaa 4288866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35046592 - 35046516
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | || ||||  |||||| |||||||||||||||| ||||| |||||||||| || ||||||    
T  35046592 attaattgaagggtataattaaaaattaaaagttattattgcattggaaattgaaagtgacattcatcttaaaacaa 35046516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 17703071 - 17703017
Alignment:
Q  23 aaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  17703071 aaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 17703017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11188571 - 11188644
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||||| | |||| ||||||| || |||| ||| |||||||| ||| ||||| |||||||||||||||||    
T  11188571 attaattgaatgatacaattgaaaaaaataagttattgttgcattgaaaactgaaagtgacattcattttgaaa 11188644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33482308 - 33482384
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| |||||||||||||   |||||| ||||| ||| | ||| ||||||||||||| ||||||    
T  33482308 attaattgaagagtacagttgaaaagaaaaaaatattattacattgaaaaataaaagtgacattcattttaaaacaa 33482384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 7034375 - 7034422
Alignment:
Q  178 tattaatggaaaaccataacttcaatgatattttgattcatttgggat 225  Q
    ||||||||||||||||||| | |||||||||||  |||||||||||||    
T  7034375 tattaatggaaaaccataaatccaatgatatttcaattcatttgggat 7034422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 10195642 - 10195572
Alignment:
Q  7 tgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||||| |||| || |||||||||||| ||| | ||| | ||||||||||| ||||||    
T  10195642 tgaagggtacaattgaaaataaaatgttattattgcattgaaaattaaaagtaacattcattttaaaacaa 10195572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43480948 - 43481026
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattat-tgcattggaa-agtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| || |||| | ||||||||||||||| ||||| ||||||| || | ||||||||||| ||||||||||||||    
T  43480948 attaattaaaaggtataattgaaaagaaaaagttattatatgcattgaaacactgaaaatgacagtcattttgaaacaa 43481026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 14833837 - 14833890
Alignment:
Q  24 aagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| ||| |||||||| ||| ||||| ||||||||||||| ||||||    
T  14833837 aagaaaaagttattgttgcattgaaaattgaaagtgacattcattttaaaacaa 14833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 40987422 - 40987454
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  40987422 taaaacgacactcattttaaaacggatggagta 40987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 45081850 - 45081818
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  45081850 taaaacgacactcattttaaaacggatggagta 45081818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15823108 - 15822986
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||        || ||||||||| ||    
T  15823108 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaaattcttttgactaaaacgactct 15823009  T
Q  100 cattttaaaacggatagagtata 122  Q
    |||||||||||||||||||||||    
T  15823008 cattttaaaacggatagagtata 15822986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29567970 - 29567894
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  29567970 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 29567894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9915517 - 9915441
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||    
T  9915517 attaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaaatgacattcattttaaaacaa 9915441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32807015 - 32807091
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  32807015 attatttgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 32807091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 50249384 - 50249308
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  50249384 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 50249308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 50094303 - 50094232
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttga 72  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  50094303 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttga 50094232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34047312 - 34047433
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa--nnnnnnnngataaaacgacac 98  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||          | |||||||||||    
T  34047312 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaattttttttttgctaaaacgacac 34047411  T
Q  99 tcattttaaaacggatagagta 120  Q
    |||||||||||||||| |||||    
T  34047412 tcattttaaaacggatggagta 34047433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 48025331 - 48025453
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||  |||| ||||||||||||||||||||         | ||||||||||||    
T  48025331 attaattgaagggtacaattgaaacgaaaaagttattattgcattggaaaccgaaagtgacattcattttgaaacaatttttttttgctaaaacgacact 48025430  T
Q  100 cattttaaaacggatagagtata 122  Q
    ||||||||||||||  |||||||    
T  48025431 cattttaaaacggagggagtata 48025453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16757271 - 16757347
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  16757271 attaattgaagggtacaattgaaaagaataagttattattgcattggaaactgaaagtgacatacattttgaaacaa 16757347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49468788 - 49468864
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||| ||||| | ||||||||||||||||||    
T  49468788 attaattgaagggtacaattgaaaagaaaatgttattattgcattggaaactgaaagttacattcattttgaaacaa 49468864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 5463649 - 5463528
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||| ||| ||||| ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||        | |||||||||| ||    
T  5463649 attaattaaagtgtacaattgaaaagaaaaagttataattgcattggaaactgaaagtgacattcattttgaaacaatttcttttgctaaaacgacattc 5463550  T
Q  101 attttaaaacggatagagtata 122  Q
    ||||| |||||||  |||||||    
T  5463549 attttgaaacggagggagtata 5463528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10842854 - 10842745
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||| ||||| |||||||||||| || |||||||||||| ||| ||||| ||||||||||||||||| ||        | |||||||||||||    
T  10842854 attaattgaagagtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacattcattttgaaataatttttttggctaaaacgacactc 10842755  T
Q  101 attttaaaac 110  Q
    ||||||||||    
T  10842754 attttaaaac 10842745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 38531377 - 38531450
Alignment:
Q  4 aattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| | | ||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  38531377 aattgaagggcataattgaaaagaaaaaattattattgcattggaaactgaaaatgacattcattttgaaacaa 38531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12484705 - 12484781
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| ||||||| ||||| || ||||||||| ||||||||||||||||    
T  12484705 attaattggagggtacagttgaaaagaaaaagttattattgtattggcaaatgaaaatgaaattcattttgaaacaa 12484781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12591159 - 12591235
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||| ||||||    
T  12591159 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttaaaacaa 12591235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 26352158 - 26352234
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| | ||| ||||||||||||||||||||    
T  26352158 attaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 26352234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 26755293 - 26755174
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||| ||| ||||||||||||| |||| || |||||||| ||||| ||||||||||||||||||||         | ||||||||||||    
T  26755293 attaattgaagggtaaatt-gaaaagaaaaagttattaatgtattggaaactgaaagtgacattcattttgaaacaattttttttggctaaaacgacact 26755195  T
Q  100 cattttaaaacggatagagta 120  Q
    |||||| ||||||||||||||    
T  26755194 cattttgaaacggatagagta 26755174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34032157 - 34032233
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | |||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||    
T  34032157 attaattggacggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 34032233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40717373 - 40717445
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||    
T  40717373 attaattgaagggtacagttgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaa 40717445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44108673 - 44108597
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||| ||||||| ||||| ||||||    
T  44108673 attaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacatttattttaaaacaa 44108597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46554872 - 46554761
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||| |||||| ||||  ||||||||||||| ||||||        | |||||||||||||    
T  46554872 attaattgaagggtacaattgaaaataaaaagttattattgcagtggaaactgaaggtgacattcattttaaaacaa-ttttttggttaaaacgacactc 46554774  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  46554773 attttaaaacgga 46554761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25487162 - 25487093
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  25487162 attaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 25487093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27209063 - 27208954
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||| |||||| ||||||| ||||||| ||||||||||||||||  |||| |||||||||||| |||||||        | ||||| |||||||    
T  27209063 attaattgaatggtacaattgaaaataaaaagttattattgcattggaaaccgaaagtgacattcatttcgaaacaatttttctggctaaaatgacactc 27208964  T
Q  101 attttaaaac 110  Q
    ||||||||||    
T  27208963 attttaaaac 27208954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 44557121 - 44557242
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||| |||||| |||||||||||| || |||||||||||||| | ||||| ||||||||||||| ||||||          |||| ||| ||||    
T  44557121 attaattgaatggtacaattgaaaagaaaatgttattattgcattggagactgaaagtgacattcattttaaaacaaatttttttactaaagcgaaactc 44557220  T
Q  101 attttaaaacggatagagtata 122  Q
    |||||||||||||| |||||||    
T  44557221 attttaaaacggatggagtata 44557242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1740718 - 1740794
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||| ||||||| |||||| ||||||||| ||||| ||||||||||||| ||||||    
T  1740718 attaattgaatggtacaattgaaaataaaaagttattatttcattggaaactgaaagtgacattcattttaaaacaa 1740794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 24611597 - 24611669
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||| |||| | ||| ||||||||||||||||    
T  24611597 attaattgaagggtacaattgaaaagaaaaagttattattacattagaaactaaaagtgacattcattttgaa 24611669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31491847 - 31491923
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||| |||| ||||||||||||||| |||||  ||||| ||| ||||| ||||||||||||||||||||    
T  31491847 attaattgaaggatacaattgaaaagaaaaagttattatgacattgaaaattgaaagtgacattcattttgaaacaa 31491923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35848010 - 35848086
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||| ||| ||||||    
T  35848010 attaattgaaaggtacaattgaaaagaaaaagttattattgcattgtaaactgaaagtgacattcactttcaaacaa 35848086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 44258588 - 44258660
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||| |||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||| ||||||    
T  44258588 attggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaa 44258660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52024311 - 52024387
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||| ||| ||||||| ||||| ||||||||||||    
T  52024311 attaattggagggtacaattgaaaagaaaaatttattattgcattgaaaactgaaaataacatttattttgaaacaa 52024387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52125213 - 52125289
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||| || ||||| | |||||||||||||||| ||||| |||||||||||| |||||||    
T  52125213 attaattgaagggtacaattgagaataaaaaattattattgcattggaaactgaaattgacattcatttcgaaacaa 52125289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 15573685 - 15573605
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaa----gtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||||||||    || |||||||||||| ||| ||||| ||||||||||||||||||||    
T  15573685 attaattgaagggtacaattgaaaagaaaaaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 15573605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 24483450 - 24483343
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaacgg 112  Q
    ||||| ||||||||||| ||| ||||||| |||||||| ||||| ||||||||||||||||||||          |||||||||||||||||||||| ||    
T  24483450 gtacaattgaaaagaaacagttattattgtattggaaactgaaactgacattcattttgaaacaatttttttttctaaaacgacactcattttaaaatgg 24483351  T
Q  113 atagagta 120  Q
    || |||||    
T  24483350 atggagta 24483343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26595146 - 26595221
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    |||||||||| |||||| ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||| |||||    
T  26595146 attaattgaatggtacaattgaaaagaaaaatttattattgcattgtaaactgaaagtgacattcattttaaaaca 26595221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 46046047 - 46045936
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||| |||||||| | ||||||| ||||||| |||||||||| | ||| ||||| ||||||||||||||||||||          |||||||||||||    
T  46046047 attaatcgaagggtataattgaaaataaaaagttattattgcatcgaaaactgaaagtgacattcattttgaaacaattttttttactaaaacgacactc 46045948  T
Q  101 attttaaaacgg 112  Q
    ||||||||||||    
T  46045947 attttaaaacgg 46045936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49402948 - 49403023
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    |||||||| || ||||| ||||||||||||||| |||||||||||||||| |||||| || ||| |||||||||||    
T  49402948 attaattggagagtacaattgaaaagaaaaagttattattgcattggaaactgaaaacgatatttattttgaaaca 49403023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25151887 - 25151821
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||||  |||| ||||||||||||    
T  25151887 taattgaagggtacaattgaaaagaaaatgttattattgcattggaaaccgaaagtgacattcattt 25151821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14373490 - 14373559
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| |||||| | ||||||| ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14373490 attaattggagggtataattgaaaataaaaagttattgttgcattggaaactgaaaatgacattcatttt 14373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24884489 - 24884420
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||| | ||||||| ||||||| |||||||||||||||| ||||| ||||||| |||||    
T  24884489 attaattgaagggtataattgaaaataaaaagttattattgcattggaaattgaaagtgacatttatttt 24884420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46286895 - 46286964
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||||||| || ||||||||||||||| |||||||||||| ||| ||||| |||||||| ||||    
T  46286895 attaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaaatgaaagtgacattcttttt 46286964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 27721032 - 27720912
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||| |||||||| ||||||||||||||| ||||||  |||| ||| ||||| ||||||||||||| ||| ||        | |||| ||||||||    
T  27721032 attaattggagggtacaattgaaaagaaaaagttattattatattgaaaactgaaagtgacattcatttttaaataaattttttggctaaagcgacactc 27720933  T
Q  101 attttaaaacggatagagtat 121  Q
    ||||| |||||||| ||||||    
T  27720932 attttgaaacggatggagtat 27720912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 34110599 - 34110535
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcat 67  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||| ||||| | ||||||||    
T  34110599 taattgaagggtacaattaaaaagaaaaagttattattgcattggaaactgaaagtaacattcat 34110535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43358277 - 43358353
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||| |||| || |||||||||||| ||||||||| ||| |||||| |||||||||    
T  43358277 attaattgaagagtacaattgaaaataaaatgttattattgcattgaaaagtgaaagtgatattcatattgaaacaa 43358353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48009084 - 48009008
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||  ||| | |||||| |||||||||| ||||||    
T  48009084 attaattgaacggtacaattgaaaagaaaaagttattattgcattaaaaactaaaaatgccattcattttaaaacaa 48009008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 14593406 - 14593465
Alignment:
Q  10 agggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    |||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||    
T  14593406 agggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattt 14593465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 30293012 - 30292938
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||| |||||||| ||||||| | ||||| |||||||||||||||| ||||| || |||||||||| ||||||    
T  30293012 taattggagggtacagttgaaaaaacaaagttattattgcattggaaactgaaagtggcattcattttaaaacaa 30292938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 46271394 - 46271468
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaac 75  Q
    ||||||||||| |||   ||||||| ||||| | |||||| ||||||||| ||||||||||||||||||||||||    
T  46271394 attaattgaagtgtattattgaaaataaaaaattattattccattggaaactgaaaatgacattcattttgaaac 46271468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 13408350 - 13408418
Alignment:
Q  9 aagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||| ||||||||||||||| |||||||||||| ||| ||||| | | ||||||||| ||||||    
T  13408350 aagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtaaaattcattttaaaacaa 13408418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18794619 - 18794694
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| ||  |||||||||||||| ||||||||||| |||| || |||||||||| ||||| ||||||    
T  18794619 attaattgaagggtgcaactgaaaagaaaaagttattattgcattcgaaactg-aaatgacatttattttaaaacaa 18794694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31798663 - 31798587
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| || |||| | ||||||||||||||| ||||||| || ||||| ||||| |||| |||||||||||||||    
T  31798663 attaattaaaaggtataattgaaaagaaaaagttattattgtatcggaaactgaaagtgacgttcattttgaaacaa 31798587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25560949 - 25561026
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaa-tgacattcattttgaaacaa 77  Q
    |||||||||| |||| | ||||||||||||| | |||||||||||||||| |||||| | | ||| ||||||||||||    
T  25560949 attaattgaaaggtataattgaaaagaaaaaattattattgcattggaaactgaaaagtaatatttattttgaaacaa 25561026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 33622454 - 33622511
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||| ||||||||| ||||| |||||||||||| |||  ||||||||||||||||||    
T  33622454 gtacaattgaaaagataaagttattattgcattgaaaatcgaaaatgacattcatttt 33622511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 2610907 - 2611027
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||| | |||| ||||||||||||| | ||||||| |||| ||| ||||| |   ||||||||  ||||||        | |||||||||||||    
T  2610907 attaattgaatgttacaattgaaaagaaaaaattattattgtattgaaaactgaaagtcgtattcatttcaaaacaattttttttgctaaaacgacactc 2611006  T
Q  101 attttaaaacggatagagtat 121  Q
    |||||||||||||| ||||||    
T  2611007 attttaaaacggatggagtat 2611027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39477785 - 39477860
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||| ||||| | |||||||||||||||| | ||| |||||| |||||| ||||||    
T  39477785 attaattgaagtgtacaattgaaaaaaaaaatt-attattgcattggaaattaaaagtgacatccattttaaaacaa 39477860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49426492 - 49426565
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||||| ||| ||  | ||||||| |||||||||||    
T  49426492 attaattgacgggtacagttgaaaagaaaaaattattattgcattgaaaactg--agtgacatttattttgaaaca 49426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 39125718 - 39125647
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||| |  || ||||||||| | |||||||||||| ||| | ||||||||| |||||||||||||    
T  39125718 attgaagggtagaactggaaagaaaaatttattattgcattgaaaacttaaaatgacagtcattttgaaaca 39125647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 43759406 - 43759363
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcat 44  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||    
T  43759406 attaattgaagggtacaattgaaaagaaaaaattattattgcat 43759363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 52066366 - 52066440
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||| ||| ||||||| | ||| ||| |||||||    
T  52066366 attaattgaagggtacaattgaaaagaaaaa-ttattactgcattgaaaattgaaaataatatttattatgaaaca 52066440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 50094213 - 50094180
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtat 121  Q
    ||||||||||||||||||||||||||| ||||||    
T  50094213 taaaacgacactcattttaaaacggatggagtat 50094180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7191284 - 7191360
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||| | ||||||||||||||| |||||| ||| | |||  |||| ||||||| ||||| ||||||    
T  7191284 attaattgaaaggtataattgaaaagaaaaagttattattacatagaaaatcgaaagtgacatttattttaaaacaa 7191360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 26352034 - 26352002
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  26352034 taaaacgacactcattttaaaacggatggagta 26352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 31491712 - 31491680
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    |||||||||||||||||||||||||| ||||||    
T  31491712 taaaacgacactcattttaaaacggagagagta 31491680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 52125078 - 52125046
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  52125078 taaaacgacactcattttaaaacggatggagta 52125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 39698745 - 39698866
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  39698745 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttttttggctaaaacgacactc 39698844  T
Q  101 attttaaaacggatagagtata 122  Q
    ||||| |||||||  |||||||    
T  39698845 attttgaaacggagggagtata 39698866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4989552 - 4989440
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||          |||||||||||||    
T  4989552 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaattttttttactaaaacgacactc 4989453  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  4989452 attttaaaacgga 4989440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39463333 - 39463257
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  39463333 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 39463257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9304712 - 9304836
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| | ||| | ||||||||||||||||||         | ||||||||||||    
T  9304712 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtcacattcattttgaaacaattttttttaattaaaacgacact 9304811  T
Q  100 cattttaaaacggatagagtatatt 124  Q
    |||||||||||||| ||||||||||    
T  9304812 cattttaaaacggagagagtatatt 9304836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15160525 - 15160601
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  15160525 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 15160601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43448790 - 43448671
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||||||||||          |||||||| ||||    
T  43448790 attaattgaagggtacaattgaaaaaaaaaagttattattgcattggaaactgaaagtgatattcattttgaaacaatttttttgattaaaacgatactc 43448691  T
Q  101 attttaaaacggatagagta 120  Q
    |||||||||||||| |||||    
T  43448690 attttaaaacggatggagta 43448671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35356381 - 35356308
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  35356381 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaaatgatattcattttgaaa 35356308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4760637 - 4760749
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | ||| |||||||||||| ||||| ||||||||||||| ||||||        | ||||||||||||     
T  4760637 attaattgaagggtacaattgaaaagaaaaaattattgttgcattggaaaatgaaagtgacattcattttaaaacaatttttttggctaaaacgacactt 4760736  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  4760737 attttaaaacgga 4760749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6374487 - 6374412
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  6374487 attaattgaagg-tacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 6374412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7839532 - 7839456
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||| | |||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||    
T  7839532 attaattgaaaggtaaaattgaaaagaaaaggttattattgcattggaaattgaaagtgacattcattttgaaacaa 7839456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29025825 - 29025901
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| | ||| |||||||| |||||||||||    
T  29025825 attaattgaagggtagaattgaaaagaaaaagttattattgcattggaaacttaaagtgacattcgttttgaaacaa 29025901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31693700 - 31693820
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||||| ||| ||||||||| ||||||        || ||||||||||||    
T  31693700 attaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttaaaacaaattttttggattaaaacgacact 31693799  T
Q  100 cattttaaaacggatagagta 120  Q
     ||||||||||||| ||||||    
T  31693800 tattttaaaacggagagagta 31693820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40228648 - 40228572
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||  ||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  40228648 attaattgaaatgtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 40228572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43084706 - 43084775
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  43084706 attaattgaaaggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 43084775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9880580 - 9880692
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||| | | ||||||||||||| | |||||||||||||||| ||  | ||||||||||||||||||||          |||||||||||||    
T  9880580 attaattgaagggcataattgaaaagaaaaaattattattgcattggaaactgtgagtgacattcattttgaaacaatttttttgactaaaacgacactc 9880679  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  9880680 attttaaaacgga 9880692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17921030 - 17920954
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||| ||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  17921030 attaattgaagagtacaattgtaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 17920954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19438310 - 19438234
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||| | ||||||| |||| |||||||    
T  19438310 attaattgaagggtacaattgaaaagaaaaagttattattacattggaaactgagagtgacatttatttcgaaacaa 19438234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37559612 - 37559688
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| ||||||| |||||||| ||||| ||||||| ||||| ||||||    
T  37559612 attaattggagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattgattttaaaacaa 37559688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39765939 - 39766014
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| | ||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  39765939 attaattggagggtacagt-gaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 39766014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40362509 - 40362433
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||| | ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  40362509 attaattggagggtaaaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 40362433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44713608 - 44713532
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||| ||||||| |||||||||||||||| ||||| ||| ||||||||| ||||||    
T  44713608 attaattgaagggtataattgaaaaaaaaaagttattattgcattggaaaatgaaagtgatattcattttaaaacaa 44713532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5295485 - 5295556
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttga 72  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| |||| | ||| |||||||||||||||    
T  5295485 attaattgaagggtacaattgaaaagaaaaaattattattgcattagaaacttaaagtgacattcattttga 5295556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15227641 - 15227522
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||| ||||  ||||||||||| | | |||||||||||| ||  ||||| ||||||||||||||||||||        | |||||| ||||||    
T  15227641 attaattgaagtgtaccattgaaaagaaacatttattattgcattgaaatttgaaagtgacattcattttgaaacaatatttttaggtaaaacaacactc 15227542  T
Q  101 attttaaaacggatagagta 120  Q
    |||||||||||||| |||||    
T  15227541 attttaaaacggatggagta 15227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 514948 - 514879
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||||| |||| ||||||||||||| | |||||||||||| ||| ||||| |||||||||||||    
T  514948 attaattgaaggatacaattgaaaagaaaaaattattattgcattgaaaattgaaagtgacattcatttt 514879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13496309 - 13496240
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||  ||||| |||||||||||| || |||||||||||||||| ||||||| |||||||||||    
T  13496309 attaattgaattgtacaattgaaaagaaaacgttattattgcattggaaattgaaaataacattcatttt 13496240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29312272 - 29312341
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||| ||||| ||||||| |||  || |||||||||||||||| |||||||||||||||||||    
T  29312272 attaattgaagagtacaattgaaaacaaacggttattattgcattggaaactgaaaatgacattcatttt 29312341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9812247 - 9812171
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||| ||||| |||||| ||||||| ||||||| ||||||||||| |||| ||||| ||||||||||||| ||||||    
T  9812247 attacttgaaaggtacaattgaaaataaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 9812171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45358973 - 45359049
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||   |||| ||||||||||||| | |||||||||||| ||| ||||||||||| ||||||||||||||    
T  45358973 attaattgaaaaatacaattgaaaagaaaaaattattattgcattgaaaattgaaaatgacagtcattttgaaacaa 45359049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 43974888 - 43974943
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||| |||||||||||||||| | ||| |||||||||||||||||    
T  43974888 ttgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaa 43974943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 396293 - 396369
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaa-tgacattcattttgaaacaa 77  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||  ||| |||||| ||||||||||||| ||||||    
T  396293 attaattga-gggtacaattgaaaagaaaaagttattattgcatttcaaactgaaaagtgacattcattttaaaacaa 396369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 14234305 - 14234410
Alignment:
Q  9 aagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaa 108  Q
    ||||||||| ||||||| ||||  | ||||||||||| |||| | ||| ||||||||||||| ||||||        | |||||||||||||||||||||    
T  14234305 aagggtacaattgaaaaaaaaatattattattgcattagaaattaaaagtgacattcattttaaaacaattttttttgctaaaacgacactcattttaaa 14234404  T
Q  109 acggat 114  Q
    ||||||    
T  14234405 acggat 14234410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19574461 - 19574384
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattg-gaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| |||| ||| | ||||||| |||| |||||||    
T  19574461 attaattgaagggtacaattgaaaagaaaaagttattattacattgcgaaactgagagtgacatttatttcgaaacaa 19574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13368027 - 13368103
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| || |||||||||||| || |||||||| ||||||| ||| ||||| |  |||||||||||||    
T  13368027 attaattgaagggtgcaattgaaaagaaaatgttattattgcgttggaaattgataatgatacccattttgaaacaa 13368103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 17655981 - 17655906
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||  | ||||| ||||||||||||    
T  17655981 attaattggagggtacagttgaaaagaaaaagttattattgcattgaaaactgaaggtaacatt-attttgaaacaa 17655906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31899327 - 31899395
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||| ||||| ||||||||||||| | |||||||||||||||| ||||| ||| || |||||    
T  31899327 attaattgaagagtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgatatccattt 31899395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34796757 - 34796833
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| || ||||||||||||| | ||||||||||| |||| | |||   ||||||||||||||||||    
T  34796757 attaattgaagggttcaattgaaaagaaaaaattattattgcattagaaactaaaaggaacattcattttgaaacaa 34796833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 6116091 - 6116160
Alignment:
Q  8 gaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | ||||||||||||||| |||||||||||| |||  |||| ||| ||||||||| ||||||    
T  6116091 gaagggtataattgaaaagaaaaagttattattgcattgaaaaccgaaagtgatattcattttaaaacaa 6116160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36921431 - 36921362
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| | |||||| ||||||||||||| | |||||||||||| ||| ||||| |||| ||||||||    
T  36921431 attaattggaaggtacaattgaaaagaaaaaattattattgcattgaaaattgaaagtgacgttcatttt 36921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43724456 - 43724379
Alignment:
Q  1 attaattgaagggtacatttgaa-aagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | |||||| ||||| || ||||| | |||||||||||||||| ||||| ||| ||||||||||||||||    
T  43724456 attaattggaaggtacaattgaagaaaaaaaaattattattgcattggaaactgaaagtgaaattcattttgaaacaa 43724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34156609 - 34156559
Alignment:
Q  1 attaattgaagggtacatttgaaaaga-aaaagtcattattgcattggaaa 50  Q
    ||||||||||||||||| ||||||||| |||| | ||||||||||||||||    
T  34156609 attaattgaagggtacaattgaaaagaaaaaaattattattgcattggaaa 34156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 32414762 - 32414725
Alignment:
Q  40 tgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  32414762 tgcattggaaactaaaaatgacattcattttgaaacaa 32414725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 34156519 - 34156482
Alignment:
Q  86 gataaaacgacactcattttaaaacggatagagtatat 123  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  34156519 gataaaacgacactcattttaaaatggatggagtatat 34156482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44342865 - 44342914
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaa 50  Q
    ||||||| ||||||||| ||||||||||||||| ||||||  ||||||||    
T  44342865 attaattaaagggtacaattgaaaagaaaaagttattattatattggaaa 44342914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 2375920 - 2375996
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || |||||| |||||  |||||| |||  ||| ||||||||| | ||||||| ||||||    
T  2375920 attaattgaagggtacagttaaaaagataaagttgttattgtattaaaaactgaaaatgataatcattttaaaacaa 2375996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 8382431 - 8382399
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  8382431 taaaacgacactcattttaaaacggatggagta 8382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 43724748 - 43724716
Alignment:
Q  89 aaaacgacactcattttaaaacggatagagtat 121  Q
    |||||||||||||||||||||||||| ||||||    
T  43724748 aaaacgacactcattttaaaacggatcgagtat 43724716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24819 - 24939
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||         ||||||||||||||    
T  24819 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttggataaaacgacact 24918  T
Q  100 cattttaaaacggatagagta 120  Q
    |||||| |||||||| |||||    
T  24919 cattttgaaacggatggagta 24939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 2729866 - 2729941
Alignment:
Q  2 ttaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  2729866 ttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcattttgaaacaa 2729941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7317102 - 7317026
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  7317102 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 7317026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10345011 - 10345087
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  10345011 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 10345087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13761631 - 13761555
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| ||||||||| ||||||||||||||||||||    
T  13761631 attaattgaagggtacaattgaaaagaaaaatttattattgcattgaaaagtgaaagtgacattcattttgaaacaa 13761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21319389 - 21319465
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||    
T  21319389 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaagctgaaagtgacattcattttgaaacaa 21319465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39566257 - 39566181
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||    
T  39566257 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttaaaacaa 39566181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42104142 - 42104218
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  42104142 attaattgaagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 42104218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 14620573 - 14620646
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  14620573 attaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaa 14620646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3025010 - 3025086
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||    
T  3025010 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 3025086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6519050 - 6518974
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||  |||||||||||||||||||    
T  6519050 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagcgacattcattttgaaacaa 6518974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26660829 - 26660753
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  26660829 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26660753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26932422 - 26932346
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  26932422 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttaaaacaa 26932346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34446106 - 34446182
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||||||| || ||||||| |||| ||| ||||||||||||||||||||||||||    
T  34446106 attaattgaagggtacaattgaaaagaaaatgttattattgtattgaaaactgaaaatgacattcattttgaaacaa 34446182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 3306088 - 3306210
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||| ||| ||          ||||| |||||||    
T  3306088 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaataatttttttgactaaaatgacactc 3306187  T
Q  101 attttaaaacggatagagtatat 123  Q
    |||||||||||||  ||||||||    
T  3306188 attttaaaacggagggagtatat 3306210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27797855 - 27797786
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  27797855 attaactgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcatttt 27797786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36164961 - 36164892
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||| | ||||||||||||||| |||| ||||||||||| |||||||||||||||||||    
T  36164961 attaattgaagggtataattgaaaagaaaaagttattactgcattggaaactgaaaatgacattcatttt 36164892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25362879 - 25362955
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||| | ||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||||    
T  25362879 attaattggagggtaaaattgaaaagaaaaagtcattattgcattcgaaactgaaagtaacattcattttgaaacaa 25362955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21195453 - 21195380
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| | ||| ||||| |||||||||||    
T  21195453 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaacttaaattgacaatcattttgaaa 21195380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36073709 - 36073785
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||| ||| | |||||||||||||||| |||||||    
T  36073709 attaattgaatgatacaattgaaaagaaaaagttattattgcattgaaaatttaaaatgacattcatttagaaacaa 36073785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 4911233 - 4911348
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattt 104  Q
    ||||||||||||| ||||||||||||||  |||||| ||||||||| | ||| ||||||| ||||||||||||        ||  |||||||||||||||    
T  4911233 attgaagggtacagttgaaaagaaaaaggtattattacattggaaactaaaagtgacatttattttgaaacaattttttttgactaaacgacactcattt 4911332  T
Q  105 taaaacggatagagta 120  Q
    | |||||||| |||||    
T  4911333 tgaaacggatggagta 4911348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 39730015 - 39729960
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  39730015 ttgaaaagaaaaagttattattgcattggaaactgaaaataacattcattttgaaa 39729960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 27600473 - 27600351
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| |||||   | ||| ||||| ||||||        | |||||||| |||     
T  27600473 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaactgaaagcaatatttattttaaaacaattttttttgttaaaacgatactt 27600374  T
Q  101 attttaaaacggatagagtatat 123  Q
    |||||||||||||| ||||||||    
T  27600373 attttaaaacggatggagtatat 27600351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34208973 - 34209052
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgc---attggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||| ||||||| ||||||||   |||||||| ||||| ||||||||||||||||||||    
T  34208973 attaattgaagggtataattgaaaaaaaaaagttattattgcattattggaaactgaaagtgacattcattttgaaacaa 34209052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39504797 - 39504720
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcatta-ttgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| |||| |||| ||||||||||||||| |||| |||||||||||| ||||| ||||||||||||| ||||||    
T  39504797 attaattaaaggatacaattgaaaagaaaaagttattaattgcattggaaactgaaagtgacattcattttaaaacaa 39504720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7579948 - 7580024
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||| ||| ||||| | ||||||||||| ||||||    
T  7579948 attaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtaacattcattttaaaacaa 7580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 24281055 - 24280991
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||| ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  24281055 gtacaattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24280991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 24381157 - 24381221
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||| ||||||||||||| | |||||||||||||||| | ||| ||||||||||||||||||||    
T  24381157 gtacaattgaaaagaaaaaattattattgcattggaaactaaaagtgacattcattttgaaacaa 24381221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35765979 - 35766051
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||| | |||||| ||||||||||||||| ||||||| |||| ||| ||||| ||||||||||||||||    
T  35765979 attaattggacggtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgacattcattttgaa 35766051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38362216 - 38362291
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||| | ||||| | |||||||| |||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  38362216 attaatttatgggtataattgaaaaggaaaagttattattgcattgaaaattgaaagtgacattcattttgaaaca 38362291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8336488 - 8336561
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||| ||||| ||||||| || |||| |||||||||||| ||| || || |||||||||||||||||    
T  8336488 attaattgaagagtacaattgaaaaaaagaagttattattgcattgaaaaatggaagtgacattcattttgaaa 8336561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 15167092 - 15167164
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||| ||| | ||||||| ||||||| |||||||||||| ||| ||||| |||||||||||||||||||    
T  15167092 taattgaagagtaaaattgaaaa-aaaaagttattattgcattgaaaactgaaagtgacattcattttgaaaca 15167164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 43584455 - 43584532
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaa-gtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||| | ||||||||||||| || |||||||||||| ||| |||||| |||||||||||| ||||||    
T  43584455 attaattggagggtataattgaaaagaaaaaagttattattgcattgaaaactgaaaacgacattcattttaaaacaa 43584532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11977662 - 11977590
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||| |||| |||| ||||||||||||||| ||||| | |||||||| ||||| |||||||| |||||||    
T  11977662 attaattaaaggatacaattgaaaagaaaaagttattatggtattggaaactgaaagtgacattcgttttgaa 11977590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 21375730 - 21375842
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||| |||||   ||| |||||||| ||| ||||| ||||||| ||||| ||||||        | |||||||||||||    
T  21375730 attaattgaagggtacaattgaaaaaaaaaaaaaatttttgcattgaaaactgaaagtgacatttattttaaaacaatttttttggctaaaacgacactc 21375829  T
Q  101 attttaaaacgga 113  Q
    ||||| |||||||    
T  21375830 attttgaaacgga 21375842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38369946 - 38369871
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| || |||||||||||| |||||||||||||||| | ||| ||| ||||||||| ||||||    
T  38369946 attaattgaagagtacaatttaaaagaaaaagttattattgcattggaaa-taaaagtgatattcattttaaaacaa 38369871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34534433 - 34534365
Alignment:
Q  1 attaattgaagggtacatttgaaaaga-aaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||| |||| | |||||||||||||||  ||||| |||||||||||||    
T  34534433 attaattgaagggtacaattgaaaagaaaaaaattattattgcattggaa--tgaaagtgacattcatttt 34534365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 843092 - 843019
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| |||||||| ||||||   |||||||||| ||| ||||| |||||||||||| |||||||    
T  843092 attaattgaatggtacaattgaaaaggaaaagt---tattgcattgcaaactgaaagtgacattcatttcgaaacaa 843019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4630939 - 4630870
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| ||| |||| ||||||||||||||| ||||||| |||| ||| ||||| ||||||| |||||    
T  4630939 attaattggaggatacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgacatttatttt 4630870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9066502 - 9066578
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| | ||||  |||||||||||  | |||||||||||| ||| ||||| | ||||||||||||||||||    
T  9066502 attaattgaatgctacaaatgaaaagaaaattttattattgcattgaaaactgaaagtaacattcattttgaaacaa 9066578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14005966 - 14005911
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaa 56  Q
    |||||||||||| || | || |||||||||||| |||||||||||||||| |||||    
T  14005966 attaattgaaggataaaattaaaaagaaaaagttattattgcattggaaactgaaa 14005911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39335283 - 39335321
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattat 39  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  39335283 attaattgaagggtacaattgaaaagaaaaagttattat 39335321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 39730155 - 39730189
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtata 122  Q
    |||||||||||||||||||||||| ||||||||||    
T  39730155 taaaacgacactcattttaaaacgaatagagtata 39730189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Original strand, 36296298 - 36296331
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtat 121  Q
    |||| |||||||||||||||||||||||||||||    
T  36296298 taaagcgacactcattttaaaacggatagagtat 36296331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42662019 - 42662087
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||| ||||| | |||||| ||||| ||| | ||||| |||||||||||    
T  42662019 attaattgaagggtacaattgaaaa-aaaaaattattattacattgaaaactaaaaataacattcatttt 42662087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29807394 - 29807465
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagt--cattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||| |||||| |||||||||||||||   ||||||||||| |||| | ||| | |||||||||||    
T  29807394 attaattgaatggtacaattgaaaagaaaaagttatattattgcattagaaactcaaagtaacattcatttt 29807465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 33741862 - 33741898
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtatatt 124  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  33741862 taaaacgacactcattttaaaatggagagagtatatt 33741898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22298070 - 22297952
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  22298070 attaactgaagggtacagttgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa-tttttttgctaaaacgacactc 22297972  T
Q  101 attttaaaacggatagagta 120  Q
    |||||||||||||| |||||    
T  22297971 attttaaaacggatggagta 22297952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 45948707 - 45948832
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa--nnnnnnnngataaaacgacac 98  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||          | |||||||||||    
T  45948707 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttttgctaaaacgacac 45948806  T
Q  99 tcattttaaaacggatagagtatatt 124  Q
    |||||||||||||||  |||||||||    
T  45948807 tcattttaaaacggaaggagtatatt 45948832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 1742065 - 1741953
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  1742065 attaattgaagggtacaattgaaaagaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaactttttgggctaaaacgacactc 1741966  T
Q  101 attttaaaacgga 113  Q
    ||||| |||||||    
T  1741965 attttgaaacgga 1741953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10476210 - 10476141
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  10476210 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacattcatttt 10476141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 715940 - 716052
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||        | |||| ||||||||    
T  715940 attaattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaaattttttggctaaagcgacactc 716039  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  716040 attttaaaacgga 716052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24680202 - 24680126
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  24680202 attaattaaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 24680126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 12977763 - 12977839
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  12977763 attaattggatggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 12977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13405204 - 13405280
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||||| ||||||||||||| ||||||    
T  13405204 attaattgaagggtacaattgaaaagaaaaagttattattacattggaaactgaaagtgacattcattttaaaacaa 13405280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42285982 - 42285906
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||    
T  42285982 attaattgaagggtataattgaaaagaaaaaattattattgcattggaaactgaaaatgacattcattttaaaacaa 42285906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42880011 - 42880087
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||| ||||| ||||||||||||||||||||    
T  42880011 attaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactgaaagtgacattcattttgaaacaa 42880087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27947578 - 27947647
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| |||||||||||||    
T  27947578 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcatttt 27947647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37815798 - 37815685
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    ||||||||||||||| | ||||||||||||| | ||||||| |||||||| |||||  |||||||||||||||||||        || ||||||||||||    
T  37815798 attaattgaagggtataattgaaaagaaaaaattattattgtattggaaattgaaagcgacattcattttgaaacaattttttttgattaaaacgacact 37815699  T
Q  100 cattttaaaacgga 113  Q
    ||||||||||||||    
T  37815698 cattttaaaacgga 37815685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 41137799 - 41137690
Alignment:
Q  4 aattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcatt 103  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||| | ||| || |||||||| ||||||||        | ||||||||||||||||    
T  41137799 aattgaagggtacaattgaaaagaaaaaattattattgcattggaaactaaaagtggcattcattgtgaaacaattttttttggtaaaacgacactcatt 41137700  T
Q  104 ttaaaacgga 113  Q
    ||||||||||    
T  41137699 ttaaaacgga 41137690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19105078 - 19105154
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||  ||| ||||| ||||||||||||| ||||||    
T  19105078 attaattgaagggtacaattgaaaagaaaaagttattattgcattaaaaactgaaagtgacattcattttaaaacaa 19105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 23935495 - 23935420
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||| ||||| ||||||    
T  23935495 attaattgaagggtacatt-gaaaagaaaaagttattattgcattggaaactgaaaacgacatttattttaaaacaa 23935420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29531012 - 29531080
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| ||| ||||||||||||||||||    
T  29531012 attaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaatgacattcattt 29531080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31418590 - 31418666
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||  ||| ||||||||||||    
T  31418590 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtggaatttattttgaaacaa 31418666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34274868 - 34274792
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| || ||||||||| || |||||||||||||||| ||||| ||||||||||||||||||||    
T  34274868 attaattggagggtacaattaaaaagaaaaggttattattgcattggaaactgaaagtgacattcattttgaaacaa 34274792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 21752189 - 21752260
Alignment:
Q  2 ttaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||||| |||||| |||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  21752189 ttaattgaatggtacaattgaaacgaaaaagttattattgcattggaaactgaaaatgacatttattttgaa 21752260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48684797 - 48684726
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttga 72  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||  |||| |||||||||||||||    
T  48684797 attaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaaccgaaagtgacattcattttga 48684726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8604049 - 8603928
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca--annnnnnnngataaaacgacac 98  Q
    |||||||||||||||   ||||||||||||||| |||||||||||||||| ||||| |||| |||||||| |||||  |        | |||||||||||    
T  8604049 attaattgaagggtatcattgaaaagaaaaagttattattgcattggaaattgaaagtgacgttcattttaaaacaatatttttatggctaaaacgacac 8603950  T
Q  99 tcattttaaaacggatagagta 120  Q
    ||||||||||||||| ||||||    
T  8603949 tcattttaaaacggagagagta 8603928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34012235 - 34012114
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||| ||||||| |||| | ||||||||| | ||| ||||||||||||| ||||||        | |||||||||||||    
T  34012235 attaattgaagggtacaattgaaaaaaaaaagttattagtacattggaaacttaaagtgacattcattttaaaacaa-ttttttggctaaaacgacactc 34012137  T
Q  101 attttaaaacggatagagtatat 123  Q
    |||||||||||||  ||||||||    
T  34012136 attttaaaacggagtgagtatat 34012114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 10599275 - 10599175
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaacgg 112  Q
    ||||| ||||||||||||||| |||||||||||| ||| ||||| ||| |||||||||||||||         | |||||||||||||||||||||||||    
T  10599275 gtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaacatttttttttgttaaaacgacactcattttaaaacgg 10599176  T
Q  113 a 113  Q
    |    
T  10599175 a 10599175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18292409 - 18292333
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | | |||| |||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  18292409 attaattggatgatacaattgaaaggaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 18292333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 24133207 - 24133283
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| |||| ||| ||||||    
T  24133207 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacgttcagtttaaaacaa 24133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36808009 - 36807933
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||| |||| |||||||||||| ||||| ||||||    
T  36808009 attaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaagcgaaaatgacatttattttaaaacaa 36807933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37490858 - 37490782
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||| ||||    
T  37490858 attaattgaaaggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgatacaa 37490782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37502393 - 37502321
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||| |||||| | ||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||    
T  37502393 attaattggagggtaaaattgaaaagaaaaagttattattgcattggaaactgaaagtgacgttcattttgaa 37502321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44453209 - 44453141
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||||||||| ||||||| | ||||| |||||||||||||||| ||||| ||||||||||||    
T  44453209 attaattgaagggtacaattgaaaaaagaaagttattattgcattggaaactgaaagtgacattcattt 44453141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25440946 - 25440884
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacat 63  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||    
T  25440946 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacat 25440884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 35777891 - 35777817
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||| ||||  |||| ||||||| ||||||||||||    
T  35777891 taattgaagggtacaattgaaaataaaaagttattattgcattagaaaccgaaagtgacatttattttgaaacaa 35777817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18270652 - 18270579
Alignment:
Q  1 attaattgaagggtacatttgaaaa-gaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||| |||||||| ||||||  |||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  18270652 attaattggagggtacaattgaaagtgaaaaagttattattgcattggaaactgaaagtgacattcattttgaa 18270579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40339532 - 40339420
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||| | ||||| |||||||||||| ||| ||||| ||||| ||||||||||||||         | ||||||||||||    
T  40339532 attaattgaagggtacaattgaaaa-ataaagttattattgcattgaaaattgaaagtgacagtcattttgaaacaattctttttggctaaaacgacact 40339434  T
Q  100 cattttaaaacgga 113  Q
    ||||||||||||||    
T  40339433 cattttaaaacgga 40339420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40753505 - 40753574
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||| |||||| ||||||||||||| | |||||| ||||| ||| |||||||||||||||||||    
T  40753505 attaattgaatggtacaattgaaaagaaaaaattattattacattgaaaactgaaaatgacattcatttt 40753574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1031229 - 1031153
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||| |||| || ||||||||| |||||| ||||  ||||||||||||||||||||    
T  1031229 attaattgaagagtacaattgaaaataaaatgttattattgcaatggaaactgaaggtgacattcattttgaaacaa 1031153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45499904 - 45499980
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| || ||||||||||||||||  | ||||| |||||||||| ||||| ||| ||||||||||||||||    
T  45499904 attaattgaaaggcacatttgaaaagaaaatattattatggcattggaaactgaaagtgaaattcattttgaaacaa 45499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30312532 - 30312463
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||| | ||||||| |||| |||  |||| |||||||||||||    
T  30312532 attaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaaccgaaagtgacattcatttt 30312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31929937 - 31930006
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||| ||| ||||||| | |||||||||    
T  31929937 attaattggagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaaataatattcatttt 31930006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6747300 - 6747225
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| || ||||||||| || |||||||||||||||| ||||| |||||||| |||| ||||||    
T  6747300 attaattggagggtacaattaaaaagaaaa-gttattattgcattggaaactgaaagtgacattcgtttttaaacaa 6747225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33939811 - 33939887
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||| ||||||||||| |||||| |||||||||   ||| ||||||||||||| ||||||    
T  33939811 attaattgaatggtacaattggaaagaaaaagttattattacattggaaaccaaaagtgacattcattttaaaacaa 33939887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 40927211 - 40927163
Alignment:
Q  27 aaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaac 75  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  40927211 aaaaagttattattgcattggaaactgaaagtgacattcattttgaaac 40927163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42753781 - 42753706
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||| |||  |||||||||||  || ||||||| |||||||| ||||| ||||||||||||||||||||    
T  42753781 attaattgaagg-tacgattgaaaagaaagtgttattattgtattggaaattgaaagtgacattcattttgaaacaa 42753706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44567118 - 44567194
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | | |||| ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  44567118 attaattggatgatacaattgaaaagaaaaatttattattgcattgaaaattgaaagtgacattcattttaaaacaa 44567194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 2297091 - 2297036
Alignment:
Q  22 aaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||  |||||||||||| ||| ||||| ||||||||||||||||||||    
T  2297091 aaaagaaaaagatattattgcattgaaaactgaaagtgacattcattttgaaacaa 2297036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45933665 - 45933737
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| || |||||||||||||    ||||||||||| ||| ||||| ||||||||||||| ||||||    
T  45933665 attaattgaagggtgcaattgaaaagaaaaa----ttattgcattgaaaactgaaagtgacattcattttaaaacaa 45933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 24780401 - 24780459
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||||| | ||||||||||| |||| ||||| ||||||||||||||||||||    
T  24780401 ttgaaaataaaaaattattattgcattagaaactgaaagtgacattcattttgaaacaa 24780459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6563491 - 6563560
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||||| ||||||  |||  ||| ||||| |||| ||||||||    
T  6563491 attaattgaagggtacaattgaaaagaaaaagttattattaaattaaaaactgaaagtgacgttcatttt 6563560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 16565214 - 16565286
Alignment:
Q  38 attgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaac 110  Q
    |||||||| |||| ||||||||||||||||||||||||||        | |||||||||||| ||||||||||    
T  16565214 attgcattagaaactgaaaatgacattcattttgaaacaatttttttagttaaaacgacacttattttaaaac 16565286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 16600448 - 16600376
Alignment:
Q  38 attgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcattttaaaac 110  Q
    |||||||| |||| ||||||||||||||||||||||||||        | |||||||||||| ||||||||||    
T  16600448 attgcattagaaactgaaaatgacattcattttgaaacaatttttttagttaaaacgacacttattttaaaac 16600376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27935841 - 27935765
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| || | |||| ||||| | ||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  27935841 attaattaaatgatacaattgaagataaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 27935765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 48843618 - 48843550
Alignment:
Q  9 aagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| | ||||| ||||||| | |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  48843618 aagggtataattgaagagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaa 48843550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28289288 - 28289219
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttg 71  Q
    |||||||||||| |||| |||||||||||| || |||||||||||| ||| | ||| ||||||| ||||||    
T  28289288 attaattgaagg-tacaattgaaaagaaaatgttattattgcattgaaaactcaaagtgacatttattttg 28289219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 36915578 - 36915612
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtata 122  Q
    |||||||||||||||||||||||||| ||||||||    
T  36915578 taaaacgacactcattttaaaacggagagagtata 36915612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 5723195 - 5723227
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  5723195 taaaacgacactcattttaaaacggatggagta 5723227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 10599572 - 10599604
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    |||||||||||||||||||||||||| ||||||    
T  10599572 taaaacgacactcattttaaaacggagagagta 10599604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 33682603 - 33682527
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | |||||||| |||| | |||||||||||| ||  ||||| ||||  || |||||||||||    
T  33682603 attaattgaagggtaaaattgaaaaggaaaaattattattgcattgaaacttgaaagtgacggtctttttgaaacaa 33682527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9720 - 9796
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  9720 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttaaaacaa 9796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 10035 - 10110
Alignment:
Q  3 taattgaagggtacatttgaaaag-aaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| |||||||| ||||| | ||||| | |||| ||| ||||| ||||||||||||| ||||||    
T  10035 taattgaagggtacaattgaaaagaaaaaaattattatagtattgaaaattgaaagtgacattcattttaaaacaa 10110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 10573237 - 10573313
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||    
T  10573237 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaaatgacattcattttgaaacaa 10573313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19451294 - 19451370
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  19451294 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 19451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24940953 - 24940877
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  24940953 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaatcgaaaatgacattcattttgaaacaa 24940877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52957873 - 52957949
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  52957873 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52957949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1819636 - 1819517
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  1819636 attaattgaagggtacaattgaaaagaaaaatttattattgcattggaaactgaaagtgacattcattttgaaacaattttttttgctaaaacgacactc 1819537  T
Q  101 attttaaaacggatagagta 120  Q
    ||||| ||| |||| |||||    
T  1819536 attttgaaatggatggagta 1819517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19930788 - 19930712
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| ||||||||||||||||||||    
T  19930788 attaattgaagggtacaattgaaaagaaaaagttattattgcatcggaaattgaaagtgacattcattttgaaacaa 19930712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40345430 - 40345506
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||    
T  40345430 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 40345506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 45043671 - 45043795
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||| ||||||          |||||||||||||    
T  45043671 attaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttaaaacaattttttttaaataaaacgacact 45043770  T
Q  100 cattttaaaacggatagagtatatt 124  Q
    ||||||||||||||| |||||||||    
T  45043771 cattttaaaacggatggagtatatt 45043795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 19878719 - 19878600
Alignment:
Q  4 aattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactcatt 103  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||        | ||||||||||||||||    
T  19878719 aattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttcaaacaattttttttgctaaaacgacactcatt 19878620  T
Q  104 ttaaaacggatagagtatat 123  Q
    || |||| ||  ||||||||    
T  19878619 ttgaaacagagggagtatat 19878600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 30261333 - 30261212
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||| ||||| ||||||||||||||||||||        || ||||||||||||    
T  30261333 attaattgaagggtacaattgaaaagaaaacattattattgcattggaaactgaaagtgacattcattttgaaacaattttttttgactaaaacgacact 30261234  T
Q  100 cattttaaaacggatagagtat 121  Q
    |||||| | |||| ||||||||    
T  30261233 cattttgacacggttagagtat 30261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 2493176 - 2493100
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| |||| |||||||||||||||    
T  2493176 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaaatgaaagtgactttcattttgaaacaa 2493100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2728481 - 2728553
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||| ||||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  2728481 attaactgaagggtactgttgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaa 2728553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22220442 - 22220518
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||||||||||| ||||||||||||    
T  22220442 attaattggagggtacaattgaaaagaaaaagttattattgcattgaaaattgaaaatgacatttattttgaaacaa 22220518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52848137 - 52848213
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||| ||||||    
T  52848137 attaattgaagggtacaattgaaaagaaaaaattattattgcattggaaattgaaagtgacattcattttaaaacaa 52848213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 4505402 - 4505335
Alignment:
Q  10 agggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  4505402 agggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 4505335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 39982173 - 39982106
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttga 72  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  39982173 attgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttga 39982106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 50203148 - 50203032
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||  | ||||| ||||||||||||| ||||||        | |||||||||||||    
T  50203148 attaattgaagggtacaattgaaaagaaaaagttattattgcattgg--actgaaagtgacattcattttaaaacaa-tttttttgctaaaacgacactc 50203052  T
Q  101 attttaaaacggatagagta 120  Q
    |||||||||||||| |||||    
T  50203051 attttaaaacggatggagta 50203032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29519608 - 29519718
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||||| |||| ||||||| ||||||| |||||||||||||||| | ||| ||||||| ||||||||||||        |||||||| ||||||    
T  29519608 attaattgaaggatacaattgaaaataaaaagttattattgcattggaaactaaaagtgacatttattttgaaacaatttttttagataaaacaacactc 29519707  T
Q  101 attttaaaacg 111  Q
    |||||||||||    
T  29519708 attttaaaacg 29519718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20448113 - 20448037
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||| | |||||||||||| ||| ||||| ||||||||||||||||||||    
T  20448113 attaattgaagggtataattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaacaa 20448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37624630 - 37624554
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| ||| |||| ||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  37624630 attaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaa 37624554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41920392 - 41920468
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| |||||||| ||||||| ||||||||||||| ||||| ||||||    
T  41920392 attaattgaagggtataattgaaaagaaaaagttattattgctttggaaactgaaaatgacatttattttaaaacaa 41920468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44571948 - 44572024
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||| |||||  |||||||||||| ||||||    
T  44571948 attaattgaagggtacaattgaaaagaaaaagtttttattgcattggaaactgaaagcgacattcattttaaaacaa 44572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47817812 - 47817736
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| | | ||||||||||||||||    
T  47817812 attaattgaagggtacaattgaaaagaaaaagttattattgcattgcaaactgaaagttaaattcattttgaaacaa 47817736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7906079 - 7906152
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||| |||||||| ||||||||||||||| |||||||||  ||||| ||||| |||||||||||||||||    
T  7906079 attaattggagggtacaattgaaaagaaaaagttattattgcaccggaaactgaaagtgacattcattttgaaa 7906152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52253922 - 52253843
Alignment:
Q  1 attaattgaagggtacatttgaaaa---gaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||   ||| |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  52253922 attaattgaagggtacaattgaaaaaaagaagaagttattattgcattggaaactgaaagtgacattcattttgaaacaa 52253843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25231249 - 25231173
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||  |||||||| | ||||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||    
T  25231249 attaattatagggtacaatagaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttaaaacaa 25231173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34413630 - 34413706
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||| ||||||| ||||||||||| |||| ||||| ||||||| ||||||||||||    
T  34413630 attaattgaatggtacaattgaaaataaaaagttattattgcatttgaaattgaaagtgacatttattttgaaacaa 34413706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37654483 - 37654408
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||| || || ||||||||||||| ||||||    
T  37654483 attaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactg-aattgacattcattttaaaacaa 37654408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 49080560 - 49080635
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||  ||| ||||| ||||||||||||||||||||    
T  49080560 attaattgaagggtacaattgaaaataaaaagttattattgcatt-aaaactgaaagtgacattcattttgaaacaa 49080635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52915625 - 52915701
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | | |||| ||||||||||||||| |||||||||||||||| |||||  |||||||||||||||||||    
T  52915625 attaattggatgatacaattgaaaagaaaaagttattattgcattggaaactgaaagcgacattcattttgaaacaa 52915701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21864466 - 21864535
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| ||| |||| ||||||||||||||| |||||||||||||||| ||||| | |||||||||||    
T  21864466 attaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacattcatttt 21864535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21920327 - 21920396
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||| ||| |||| ||||||||||||||| |||||||||||||||| ||||| | |||||||||||    
T  21920327 attaattggaggatacaattgaaaagaaaaagttattattgcattggaaactgaaagtaacattcatttt 21920396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 27943628 - 27943705
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaa-aagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||| ||| |||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  27943628 attaattgaagggtataattgaaaaaaaagaagttattattgcattgaaaattgaaagtgacattcattttgaaacaa 27943705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34316296 - 34316227
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||| ||||| | |||||||||||||||| ||||| ||||||| |||||    
T  34316296 attaattgaagggtacaattgaaaataaaaaattattattgcattggaaactgaaagtgacatttatttt 34316227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41496279 - 41496203
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||||||||||| ||||||| |||| ||| ||||| ||| ||| ||||||||||||    
T  41496279 attaattgaagagtacaattgaaaagaaaaagttattattgtattgaaaactgaaagtgagatttattttgaaacaa 41496203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 50623157 - 50623081
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||| ||| | ||||| |||| |||||| ||||||    
T  50623157 attaattgaagggtataattgaaaagaaaaagttattattgcattgaaaactaaaaataacatacattttaaaacaa 50623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 51733577 - 51733653
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| ||||||||  | |||||||||| | ||||||||||| |||| ||||| ||||||||||||||||||||    
T  51733577 attaattggagggtacaagtaaaaagaaaaaattattattgcattagaaactgaaagtgacattcattttgaaacaa 51733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 54042266 - 54042342
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||| | |||||| |||||||||  |||| ||||||||||||| ||||||    
T  54042266 attaattgaaaggtacaattgaaaagaaaaaattattattacattggaaaccgaaagtgacattcattttaaaacaa 54042342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 40837178 - 40837128
Alignment:
Q  27 aaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  40837178 aaaaagttattattgcattggaaaatgaaagtgacattcattttgaaacaa 40837128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 40010956 - 40011033
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaa-aagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||| ||| ||||  ||||||||||||||| ||||| | ||||||||||| ||||||    
T  40010956 attaattgaagggtacaattgaaaaaaaagaagttgttattgcattggaaactgaaagtaacattcattttaaaacaa 40011033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 31918030 - 31917954
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | |||||||||||||   |||||||||||||||  ||||| ||| ||||||||| ||||||    
T  31918030 attaattgaagggtaaaattgaaaagaaaaaactattattgcattggaagctgaaagtgaaattcattttaaaacaa 31917954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45839711 - 45839643
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    |||||||||| |||||| ||||||| ||||||| ||||||| ||| |||| ||||| ||||||||||||    
T  45839711 attaattgaatggtacaattgaaaataaaaagttattattgtattagaaactgaaagtgacattcattt 45839643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 46392144 - 46392256
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||| |||| | ||||||||||||| | |||||||| ||| ||||||||| |||||  |||||| ||| ||        | |||||||||||||    
T  46392144 attaattgaaaggtataattgaaaagaaaaaattattattgctttgaaaagtgaaagtgacagccattttaaaataatttttttagctaaaacgacactc 46392243  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  46392244 attttaaaacgga 46392256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 53814580 - 53814656
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || |||| ||||||| ||||||||||||  || | ||| |||||||||||||| |||||    
T  53814580 attaattgaagggtacaattaaaaataaaaagttattattgcattgttaactaaaagtgacattcattttggaacaa 53814656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25123809 - 25123872
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacatt 64  Q
    |||||||||||||||||  |||||||||||| | ||||||| |||| ||| |||||||||||||    
T  25123809 attaattgaagggtacaactgaaaagaaaaaattattattgtattgaaaactgaaaatgacatt 25123872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 49089535 - 49089462
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||| | ||| ||| ||||||| |||||||||||| ||| | ||| ||||||||||||||||||||    
T  49089535 taattgaagggtataattggaaa-aaaaagttattattgcattgaaaactaaaagtgacattcattttgaaacaa 49089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6991345 - 6991413
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||| ||||||||||||| ||||||||||| | ||||||| |||| ||| ||||| |||||||||||||    
T  6991345 attaactgaagggtacatt-gaaaagaaaaaattattattgtattgaaaactgaaagtgacattcatttt 6991413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 27653748 - 27653674
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||  |||||| || |||||||| |||| | ||||||||||| ||||| ||||||    
T  27653748 attaattgaagggtacaattgaaaa--aaaagttatcattgcattagaaactaaaaatgacatttattttaaaacaa 27653674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 44061071 - 44061006
Alignment:
Q  12 ggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||| ||||||||||||||| ||||||| ||| |||| ||||| ||||||||||| | ||||||    
T  44061071 ggtacaattgaaaagaaaaagttattattgtattagaaaatgaaagtgacattcattataaaacaa 44061006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 8971116 - 8971040
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||| ||||| ||||||||||||| | |||||| ||||| ||| ||||| ||||  ||||||| ||||||    
T  8971116 attaattgaagagtacaattgaaaagaaaaaattattatttcattgaaaactgaaagtgacggtcattttaaaacaa 8971040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11364300 - 11364256
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcatt 45  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||    
T  11364300 attaattgaagggtacaattgaaaagaaaaagttattatttcatt 11364256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18430063 - 18430023
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattg 41  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  18430063 attaattgaagggtacaattgaaaagaaaaagttattattg 18430023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 24157259 - 24157183
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| |||| |||| || |||||||||| | ||||||||||| |||| | ||| ||||||| ||||||||||||    
T  24157259 attaattaaaggatacaattaaaaagaaaaaattattattgcattagaaactaaaattgacatttattttgaaacaa 24157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38510328 - 38510387
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatga 60  Q
    |||||||| | |||||| ||||||||||||||| |||||||||||| ||| | |||||||    
T  38510328 attaattggatggtacaattgaaaagaaaaagttattattgcattgaaaactaaaaatga 38510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 123
Target Start/End: Complemental strand, 53814445 - 53814410
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtatat 123  Q
    ||||||||||||||||||||||||||| ||||||||    
T  53814445 taaaacgacactcattttaaaacggatggagtatat 53814410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 620260 - 620330
Alignment:
Q  1 attaattgaagggtacatttgaaaag-aaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| |||||||| ||||| | ||||||||||| |||| | ||| ||| |||||||||    
T  620260 attaattgaagggtacaattgaaaagaaaaaaattattattgcattagaaacttaaactgatattcatttt 620330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 37624754 - 37624788
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtata 122  Q
    ||||||||||||||||||||||||||| |||||||    
T  37624754 taaaacgacactcattttaaaacggatggagtata 37624788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 17499662 - 17499629
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtat 121  Q
    |||||||||||||||||||||||||| |||||||    
T  17499662 taaaacgacactcattttaaaacggagagagtat 17499629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 38510204 - 38510171
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtat 121  Q
    ||||||||||||||||||||||||||| ||||||    
T  38510204 taaaacgacactcattttaaaacggatggagtat 38510171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38991844 - 38991893
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaa 50  Q
    |||||||||||  |||| || |||||||||||| ||||||||||||||||    
T  38991844 attaattgaagaatacaattcaaaagaaaaagttattattgcattggaaa 38991893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 54042130 - 54042097
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtat 121  Q
    ||||||||||||||||||||||||||| ||||||    
T  54042130 taaaacgacactcattttaaaacggatggagtat 54042097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 56373660 - 56373729
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||| | ||||||  ||| |||| ||||| | | |||||||||    
T  56373660 attaattgaagggtacaattgaaaagaaaaaattattattatattagaaactgaaagtaatattcatttt 56373729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 56460155 - 56460082
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    |||||||||| || | || |||||||||||| | |||||||||| ||  ||||| ||||||||||||| |||||    
T  56460155 taattgaaggatataattaaaaagaaaaagttactattgcattgaaagctgaaagtgacattcattttaaaaca 56460082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 45889770 - 45889802
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    |||||||||||||||||| ||||||||||||||    
T  45889770 taaaacgacactcattttgaaacggatagagta 45889802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 55092567 - 55092607
Alignment:
Q  37 tattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||  |||||||||||||||||||||||||    
T  55092567 tattgcattgaaaatcgaaaatgacattcattttgaaacaa 55092607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 3152882 - 3152994
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||        | ||||| |||||||    
T  3152882 attaattgaagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaattttttttgctaaaatgacactc 3152981  T
Q  101 attttaaaacgga 113  Q
    |||||||||||||    
T  3152982 attttaaaacgga 3152994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11393619 - 11393543
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  11393619 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaaatgacattcattttaaaacaa 11393543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30426400 - 30426476
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  30426400 attaattgaagggtacaattaaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 30426476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48901794 - 48901718
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  48901794 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 48901718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 48903360 - 48903284
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  48903360 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaaacaa 48903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38016448 - 38016330
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||        | |||||||||||||    
T  38016448 attaattgaagg-tacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacattcattttgaaacaatttctttggctaaaacgacactc 38016350  T
Q  101 attttaaaacggatagagta 120  Q
    ||||| |||||||| |||||    
T  38016349 attttgaaacggatggagta 38016330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47895420 - 47895496
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  47895420 attaattgaagggtataattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 47895496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 36729886 - 36729957
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttga 72  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  36729886 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttga 36729957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4392270 - 4392157
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||||| ||||||  |||||||| ||||| ||||||||||||||||||||         | ||||||||||||    
T  4392270 attaattgaagggtacaattgaaaagaaaaagttattattaaattggaaactgaaactgacattcattttgaaacaattattttttgctaaaacgacact 4392171  T
Q  100 cattttaaaacgga 113  Q
    ||||||||||||||    
T  4392170 cattttaaaacgga 4392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 4759065 - 4758989
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||    
T  4759065 attaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaagtgaaagtgacatttattttaaaacaa 4758989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 42072059 - 42071983
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||||||||| |||||| ||||||    
T  42072059 attaattgaagggtacagttgaaaagaaaaagttattattgcattggaaactaaaaatgacatccattttaaaacaa 42071983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 42571605 - 42571681
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||    
T  42571605 attaattggagggtacaattgaaaagaaaaagttattattgcattggaaactgcaagtgacattcattttgaaacaa 42571681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44676295 - 44676219
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||||||| ||||| ||||||||||||||||||||    
T  44676295 attaattggagggtacaattgaaaagaaaaagttatcattgcattggaaactgaaagtgacattcattttgaaacaa 44676219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45213798 - 45213874
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||| ||||||||||||| ||||||    
T  45213798 attaattgaagggtacaattgaaaagaaaaagttattattgcattagaaactgaaagtgacattcattttaaaacaa 45213874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50646186 - 50646308
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||| || |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||         | ||||||||||||    
T  50646186 attaattaaatggtacaattgaaaagaaaaagttattattgcattggaaactgaaagtgacatttattttgaaacaatttttttttgttaaaacgacact 50646285  T
Q  100 cattttaaaacggatagagtata 122  Q
    ||||||||||||||  |||||||    
T  50646286 cattttaaaacggaaggagtata 50646308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2458081 - 2457960
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||| | || |||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||||        | | |||||| ||||    
T  2458081 attaattgaagggtataattaaaaagaaaaagttattattgtattggaaactgaaagtgacattcattttgaaacaatttttttggcttaaacgatactc 2457982  T
Q  101 attttaaaacggatagagtata 122  Q
    ||||| |||||||| |||||||    
T  2457981 attttgaaacggatggagtata 2457960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 51398084 - 51397963
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||||| |||||| ||||| ||| | ||| ||||||| ||||||||||||         | ||||||||||||    
T  51398084 attaattgaagggtacaattgaaaagaaaaagttattattacattgaaaactaaaagtgacatttattttgaaacaattttttttggctaaaacgacact 51397985  T
Q  100 cattttaaaacggatagagtat 121  Q
    ||||||||||||||| ||||||    
T  51397984 cattttaaaacggatggagtat 51397963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32492257 - 32492333
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||| | ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  32492257 attaattgaatggtataattgaaaagaaaaagttattattgcattgaaaattgaaagtgacattcattttgaaacaa 32492333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33194107 - 33194215
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| || |||| ||||||| || ||||||||||||| ||||| ||||||||||||| ||||||        | |||||||||||||    
T  33194107 attaattgaagggtacaattaaaaataaaaagttatcattgcattggaaactgaaagtgacattcattttaaaacaattttttttgctaaaacgacactc 33194206  T
Q  101 attttaaaa 109  Q
    |||||||||    
T  33194207 attttaaaa 33194215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41850464 - 41850388
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| || |||||||||| ||||||    
T  41850464 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgtcattcattttaaaacaa 41850388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50038247 - 50038323
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| ||||||    
T  50038247 attaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttaaaacaa 50038323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 36460880 - 36460805
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    |||||||||||||| || ||||||||||||||| |||||||||||| ||| ||||| ||| |||||||||||||||    
T  36460880 attaattgaagggtgcaattgaaaagaaaaagttattattgcattgaaaactgaaagtgatattcattttgaaaca 36460805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30431194 - 30431121
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||||||| |||| ||||||||||||| | |||||||||||| ||| ||||| |||||||||||||||||    
T  30431194 attaattgaaggttacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattcattttgaaa 30431121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40487902 - 40487829
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||||||||   ||| |||||||||||||||||    
T  40487902 attaattgaaaggtacaattgaaaagaaaaagttattattgcattggaaatcaaaagtgacattcattttgaaa 40487829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 19373660 - 19373584
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||| ||||||| |||||| ||||| ||| ||||| ||||| ||||||||||||||    
T  19373660 attaattgaagggtacaattgaaaataaaaagttattatttcattgaaaattgaaagtgacagtcattttgaaacaa 19373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 30315383 - 30315307
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | || |||||||||||| ||| ||||||||||||  |||| ||||||||||||||||||||    
T  30315383 attaattgaagggtataattcaaaagaaaaagttattcttgcattggaaacggaaagtgacattcattttgaaacaa 30315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47138037 - 47137961
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||| ||| | ||||||||||||||||| ||||||    
T  47138037 attatttgaagggtacaattgaaaataaaaagttattattgcattgaaaactaaaaatgacattcattttaaaacaa 47137961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 50088392 - 50088468
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||| | ||| |||| |||||||| ||||||    
T  50088392 attaattgaagggtacaattgaaaagaaaaagttactattgcattggaaactaaaagtgacgttcattttaaaacaa 50088468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 19115443 - 19115385
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||    
T  19115443 ttgaaaagaaaaagttattattgcattggaaactcaaagtgacattcattttgaaacaa 19115385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27067682 - 27067634
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaa 49  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  27067682 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaa 27067634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 39356959 - 39356883
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| |||||||||||| || |||||||||||| ||| ||||| ||||||| ||||| ||||||    
T  39356959 attaattgaaaggtacaattgaaaagaaaatgttattattgcattgaaaactgaaagtgacatttattttaaaacaa 39356883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7230972 - 7231047
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    |||||||||| | |||| ||||||||||||||| ||||||||||| | || | ||| |||||||||||||||||||    
T  7230972 attaattgaatgatacaattgaaaagaaaaagttattattgcattcgtaactaaaagtgacattcattttgaaaca 7231047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38141024 - 38140949
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||||| ||| |  |||| |||| || |||||||||||||||| ||||| |||||||||||||||||||    
T  38141024 attaattgaagggcacaatgaaaaaaaaaaggttattattgcattggaaactgaaagtgacattcattttgaaaca 38140949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30934885 - 30934958
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||| ||||||| ||||||||||||| | |||||||||||||||| ||   |||||||||||||| ||||||    
T  30934885 attaattgaggggtacaattgaaaagaaaaaattattattgcattggaaactg---atgacattcattttaaaacaa 30934958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 42886807 - 42886749
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| |||||||||||||||| | ||| | ||||||||||||||||||    
T  42886807 ttgaaaagaaaaagttattattgcattggaaatttaaagtaacattcattttgaaacaa 42886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 9189511 - 9189580
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||| | || ||||||||||||||||| |||||| ||||| ||| ||||| |||||||||||||    
T  9189511 attaattgaatgatatatttgaaaagaaaaagttattatttcattgaaaactgaaagtgacattcatttt 9189580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33024376 - 33024445
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    |||||||||| ||| || ||||||||| ||||| |||||||||||||||| ||||| | |||||||||||    
T  33024376 attaattgaatggtgcaattgaaaagataaagttattattgcattggaaactgaaagtaacattcatttt 33024445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36844818 - 36844931
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacact 99  Q
    |||||||||| | |||| ||||||||||||| | |||||||||||| ||| ||||| |||||||  |||||||||||         | ||||||||||||    
T  36844818 attaattgaatgatacaattgaaaagaaaaaattattattgcattgaaaactgaaagtgacattggttttgaaacaattattttttgttaaaacgacact 36844917  T
Q  100 cattttaaaacgga 113  Q
    ||||||||||||||    
T  36844918 cattttaaaacgga 36844931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 41287572 - 41287651
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcat---tattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||||| ||   ||||||| ||||||  |||| ||||||||||||||||||||    
T  41287572 attaattgaagggtataattgaaaagaaaaagttattagtattgcactggaaaccgaaagtgacattcattttgaaacaa 41287651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11019902 - 11019978
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||  ||||||||||||| | |||||||||||| ||| ||||| ||||||| ||||| ||||||    
T  11019902 attaattgaaaggtacgattgaaaagaaaaaattattattgcattgaaaaatgaaagtgacattaattttaaaacaa 11019978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22857164 - 22857088
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||  ||||| ||||||||||||||| |||||| ||||| |||  |||| ||||||||||||| ||||||    
T  22857164 attaattgaacagtacaattgaaaagaaaaagttattattacattgaaaatcgaaagtgacattcattttaaaacaa 22857088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 50346695 - 50346624
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||| |||||||||||| || |||||||||||| ||| | ||||||||||| | ||||||||||    
T  50346695 attgaagggtacaattgaaaagaaaatgt-attattgcattgaaaactcaaaatgacatttagtttgaaacaa 50346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 53200768 - 53200832
Alignment:
Q  13 gtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||| ||||||||||||||| |||||||||||| ||| | ||| ||||||||||||| ||||||    
T  53200768 gtacaattgaaaagaaaaagttattattgcattgaaaactaaaagtgacattcattttaaaacaa 53200832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 35557836 - 35557910
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||| ||||||||||||| | |||||||||||||||| ||||| ||| ||  ||||| ||||||    
T  35557836 taattgaaaggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgatatatattttaaaacaa 35557910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38363865 - 38363740
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaa------gtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacg 94  Q
    ||||||||||||||||| ||||||| |||||      || |||||||||||| ||| ||||| ||||||||||||||||||          | |||||||    
T  38363865 attaattgaagggtacaattgaaaaaaaaaaaaaaaggttattattgcattgtaaactgaaagtgacattcattttgaaacttttttttttgctaaaacg 38363766  T
Q  95 acactcattttaaaacggatagagta 120  Q
    |||||||||||||||| ||| |||||    
T  38363765 acactcattttaaaacagatggagta 38363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 23208387 - 23208441
Alignment:
Q  21 gaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||||    
T  23208387 gaaaagaaaaagttattattg--ttggaaactgaaagtgacattcattttgaaacaa 23208441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23525392 - 23525441
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaa 50  Q
    ||||||||||||||| | ||||||||||||| | ||||||||||||||||    
T  23525392 attaattgaagggtatagttgaaaagaaaaacttattattgcattggaaa 23525441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31583510 - 31583623
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    |||||||| | |||||| ||||||||||||  | ||||||||| |||||| ||||| ||||||| ||||| ||||||         | ||||||||||||    
T  31583510 attaattggaaggtacaattgaaaagaaaagattattattgcactggaaactgaaagtgacattaattttaaaacaatttttttttactaaaacgacact 31583609  T
Q  100 cattttaaaacgga 113  Q
    ||||||||||||||    
T  31583610 cattttaaaacgga 31583623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31853638 - 31853714
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |  |||||||||| | ||||||| | |||||| | ||| ||||||| ||||||||||||    
T  31853638 attaattgaagggtacaataaaaaagaaaaaattattattgtactggaaactaaaagtgacatttattttgaaacaa 31853714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45460737 - 45460665
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||| |||||||| ||||||||||| ||| ||||||| |||| ||  ||||||| ||||| ||||||||    
T  45460737 attaattggagggtacaattgaaaagaaagagttattattgtattgaaatatgaaaataacattaattttgaa 45460665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 52654364 - 52654310
Alignment:
Q  15 acatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattt 69  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||| ||||||| ||||    
T  52654364 acatttgaaaagaaaaagttattattgtattgaaaactgaaagtgacatttattt 52654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 42940004 - 42939967
Alignment:
Q  40 tgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  42940004 tgcattgaaaaatgaaaatgacattcattttgaaacaa 42939967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 27027719 - 27027687
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    |||||||||||| ||||||||||||||||||||    
T  27027719 taaaacgacacttattttaaaacggatagagta 27027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 30186360 - 30186328
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  30186360 taaaacgacactcattttaaaacggatggagta 30186328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 38364000 - 38364032
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    |||||||||||||||||||||||||| ||||||    
T  38364000 taaaacgacactcattttaaaacggagagagta 38364032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 115
Target Start/End: Complemental strand, 43599493 - 43599465
Alignment:
Q  87 ataaaacgacactcattttaaaacggata 115  Q
    |||||||||||||||||||||||||||||    
T  43599493 ataaaacgacactcattttaaaacggata 43599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 47823527 - 47823603
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||  |||| || |||||||||| | |||||||||||  ||| | ||||||||||| ||||| ||||||    
T  47823527 attaattgaagaatacaattaaaaagaaaaaattattattgcattaaaaactaaaaatgacatttattttaaaacaa 47823603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 48169480 - 48169448
Alignment:
Q  42 cattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||| |||||||||||||||||||||||||||    
T  48169480 cattgaaaagtgaaaatgacattcattttgaaa 48169448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 54403341 - 54403409
Alignment:
Q  2 ttaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||| ||||||||  ||||||||||| || |  |||||||| |||| | |||||||||||||||||    
T  54403341 ttaattggagggtacaaatgaaaagaaaatgttaacattgcatttgaaactaaaaatgacattcatttt 54403409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 18334 - 18405
Alignment:
Q  2 ttaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18334 ttaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaa 18405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 234108 - 234032
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||    
T  234108 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaactaaaagtgacattcattttgaaacaa 234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19675054 - 19674982
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  19675054 attaattgaatggtacaattgaaaagaaaaagttattattgcattggaaactgaaaatgacattcattttgaa 19674982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29713485 - 29713557
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  29713485 attaattgaagggtacaattgaaaagaaaaagttattattgcattggaaacggaaaatgacattcattttgaa 29713557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4850574 - 4850650
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| | |||||| ||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  4850574 attaattggatggtacaattgaaaagaaaaagttattattgcattggaaattgaaagtgacattcattttgaaacaa 4850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23259404 - 23259480
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||||||||| |||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  23259404 attaatttaagggtacaattgaaaagtaaaagttatttttgcattggaaactgaaaatgacattcattttgaaacaa 23259480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29400020 - 29399944
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||||||||||    
T  29400020 attaattggagggtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttgaaacaa 29399944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24163793 - 24163916
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||  ||||| ||||||||||||| | |||||||||||||||| ||||| ||||||||||||| ||||||        | ||||| |||||||    
T  24163793 attaattgaaatgtacaattgaaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaacaatttttttggctaaaatgacactc 24163892  T
Q  101 attttaaaacggatagagtatatt 124  Q
    |||||||||||||  |||||||||    
T  24163893 attttaaaacggagggagtatatt 24163916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 32429358 - 32429238
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    |||||||| | | |||| ||||||||||||||| |||||||||||||||| | ||| |||||||| |||||||||||        | |||||||||||||    
T  32429358 attaattggatgatacaattgaaaagaaaaagttattattgcattggaaattaaaagtgacattcgttttgaaacaa-ttttttggctaaaacgacactc 32429260  T
Q  101 attttaaaacggatagagtata 122  Q
    |||||||||||||| |||||||    
T  32429259 attttaaaacggatggagtata 32429238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 32193776 - 32193653
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaac-aannnnnnnngataaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| |||| | ||| ||||||| ||||| |||| ||        | ||||||||||||    
T  32193776 attaattgaagggtacaattgaaaagaaaaaattattattgcattagaaactaaaagtgacatttattttaaaacaaattattttggctaaaacgacact 32193677  T
Q  100 cattttaaaacggatagagtatat 123  Q
    |||||||||||| |||||||||||    
T  32193676 cattttaaaacgaatagagtatat 32193653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13503925 - 13504002
Alignment:
Q  1 attaattgaagggtacatttgaaa--agaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||||||||| ||||||  | ||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  13503925 attaattgaagggtacaattgaaataaaaaaaagttattattgcattggaaactgaaagtgacattcattttgaaaca 13504002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 12063592 - 12063665
Alignment:
Q  4 aattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| ||||||| ||||| | |||||||||||||||| ||||| |||||||||||| |||||||    
T  12063592 aattgaagggtacaattgaaaaaaaaaaattattattgcattggaaactgaaagtgacattcatttggaaacaa 12063665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18737169 - 18737245
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||||||| | ||||||||||| ||| |||||||||||||||| ||||| ||||||||||||| ||||||    
T  18737169 attaattaaagggtataattgaaaagaaagagttattattgcattggaaactgaaagtgacattcattttaaaacaa 18737245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10520718 - 10520827
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||||||||||||| | ||||||| |||| ||| ||||| ||||||| ||||| ||||||        | ||||| |||||||    
T  10520718 attaattgaagggtacaattgaaaagaaaaaattattattgtattgaaaattgaaagtgacatttattttaaaacaatttttttagctaaaatgacactc 10520817  T
Q  101 attttaaaac 110  Q
    ||||||||||    
T  10520818 attttaaaac 10520827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 31443524 - 31443601
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaa-gtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||| |||||| ||||||| ||||| || |||||||||||||||| ||||||| ||||||||||| ||||||    
T  31443524 attaattgaaaggtacaattgaaaaaaaaaaagttattattgcattggaaactgaaaataacattcatttttaaacaa 31443601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 9940722 - 9940646
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| |||||||  |||||| |||||||||||| ||| ||||| ||||| ||||||| ||||||    
T  9940722 attaattgaagggtacaattgaaaaagaaaagttattattgcattgaaaactgaaagtgacaatcattttaaaacaa 9940646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 8030714 - 8030643
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||| ||| ||||| | |||||||||||||||    
T  8030714 taattgaagggtacagttgaaaagaaaaaattattattacattgaaaactgaaagtaacattcattttgaaa 8030643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 10540590 - 10540700
Alignment:
Q  3 taattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa-nnnnnnnngataaaacgacactca 101  Q
    ||||||||||||||| ||||||  |||| || |||||||||||||||| ||||| ||||||| ||||||||||||         | ||||||||||||||    
T  10540590 taattgaagggtacaattgaaac-aaaaggttattattgcattggaaattgaaagtgacatttattttgaaacaattttttttagctaaaacgacactca 10540688  T
Q  102 ttttaaaacgga 113  Q
    ||||||||||||    
T  10540689 ttttaaaacgga 10540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34513682 - 34513737
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaa 56  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||    
T  34513682 attaattgaaggatacaattgaaaagaaaaagttattattgcattggaaactgaaa 34513737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3988822 - 3988896
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||| ||  ||| ||||||||||||    
T  3988822 attaattgaagggtataattgaaaagaaaaaattattattgcattggaaactgaaagtg--atttattttgaaacaa 3988896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24556007 - 24556076
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||| ||||| ||||||||||||| | |||||| ||||| ||| ||||||||||||| |||||    
T  24556007 attaattgaagagtacaattgaaaagaaaaaattattattacattgaaaactgaaaatgacatttatttt 24556076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 31233707 - 31233780
Alignment:
Q  4 aattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||| ||||||||||||  | ||||||||| || ||| ||||| ||||||||||||| ||||||    
T  31233707 aattgaagggtacaattgaaaagaaaatattattattgcaatgaaaactgaaagtgacattcattttaaaacaa 31233780  T

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Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12459397 - 12459469
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    ||||||||||||||| | ||||||||||||||  ||||||| ||| ||||  |||| ||||||||||||||||    
T  12459397 attaattgaagggtataattgaaaagaaaaagatattattgtattagaaaccgaaagtgacattcattttgaa 12459469  T

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Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19689404 - 19689357
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattgga 48  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  19689404 attaattgaagagtacagttgaaaagaaaaagttattattgcattgga 19689357  T

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Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 17552358 - 17552400
Alignment:
Q  35 attattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  17552358 attattgcattggaaactgaaaatgacattcatttcgaaacaa 17552400  T

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Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 12322965 - 12323035
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaa 73  Q
    |||||||||||||| || ||||||  |||||   |||||||||||||||| ||||| ||||||||||||||||    
T  12322965 attaattgaagggtgcaattgaaataaaaaat--attattgcattggaaactgaaagtgacattcattttgaa 12323035  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1134999 - 1134959
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattg 41  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  1134999 attaattgaagggtacaattgaaaagaaaaagttattattg 1134959  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1502836 - 1502893
Alignment:
Q  19 ttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaaca 76  Q
    ||||||||||| | | | |||||||||||||| ||||||||||||| ||||| |||||    
T  1502836 ttgaaaagaaataattactattgcattggaaactgaaaatgacattaattttaaaaca 1502893  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17267686 - 17267731
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattg 46  Q
    ||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  17267686 attaattaaagggtacagttgaaaagaaaaaattattattgcattg 17267731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 577135 - 577059
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||| | |||||| || ||||| |||||||||||| ||| ||||| ||| | | ||||| ||||||    
T  577135 attaattgaagggtataattgaaatgataaagttattattgcattgaaaactgaaagtgatagttattttaaaacaa 577059  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 23936527 - 23936491
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagtatatt 124  Q
    ||||||||||||||||||||||||||  |||||||||    
T  23936527 taaaacgacactcattttaaaacggagggagtatatt 23936491  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 120
Target Start/End: Original strand, 34519292 - 34519324
Alignment:
Q  88 taaaacgacactcattttaaaacggatagagta 120  Q
    ||||||||||||||||||||||||||| |||||    
T  34519292 taaaacgacactcattttaaaacggatggagta 34519324  T

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Target: scaffold0294 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3583 - 3656
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  3583 attaattgaagggtacaattgaaaagaaaaagttattattgtattggaaactgaaagtgacattcattttgaaa 3656  T

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Target: scaffold0332 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3889 - 3965
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||    
T  3889 attaattggagggtacaattgaaaagaaaaagttattattgcattgaaaactgaaagtgacattcattttgaaacaa 3965  T

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Target: scaffold2107 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 592 - 712
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnngataaaacgacactc 100  Q
    ||||||||||||||||| ||| ||||||||| | |||||||||||||||| ||||| ||||||||||||| ||| ||        | |||||||||| ||    
T  592 attaattgaagggtacaattgtaaagaaaaaattattattgcattggaaactgaaagtgacattcattttaaaataatatttttggctaaaacgacattc 691  T
Q  101 attttaaaacggatagagtat 121  Q
    ||||| |||||||| ||||||    
T  692 attttgaaacggatggagtat 712  T

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Target: scaffold0078 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 1492 - 1568
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||| ||||||||||| ||||||||||||||| || |||||||| |||| ||||| ||||||||||||||||||||    
T  1492 attaaatgaagggtacaattgaaaagaaaaagttatcattgcattagaaactgaaagtgacattcattttgaaacaa 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 62707 - 62631
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||||||||||||| || |||||||||||| |||||| ||| ||||| ||||| ||||||||||||||||||||    
T  62707 attaattgaagggtacaattaaaaagaaaaagttattattacataggaaactgaaagtgacattcattttgaaacaa 62631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 650 - 719
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcatttt 70  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||| || || |||||||||||||    
T  650 attaattgaagggtacaattaaaaagaaaaagttattattgcattggaaattgtaagtgacattcatttt 719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 21160 - 21281
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaannnnnnnnga-taaaacgacact 99  Q
    ||||||||||||||||| ||||||||||||| | ||||||||||| |||| ||||| ||||| ||||||| ||| ||         | ||||||||||||    
T  21160 attaattgaagggtacaattgaaaagaaaaaattattattgcatttgaaactgaaagtgacagtcattttaaaataatttttttttattaaaacgacact 21259  T
Q  100 cattttaaaacggatagagtat 121  Q
    ||||||||||||||| ||||||    
T  21260 cattttaaaacggatggagtat 21281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4215 - 4145
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtg-aaaatgacattcatttt 70  Q
    ||||||||||||||||| ||||||||||||| | |||||||||||| ||| || |||||||||||||||||    
T  4215 attaattgaagggtacaattgaaaagaaaaaattattattgcattgaaaattgaaaaatgacattcatttt 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 765 - 841
Alignment:
Q  1 attaattgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    ||||||| ||||||||| ||||||||||||| | |||||| || |||||| ||||| ||||||||||| ||||||||    
T  765 attaattaaagggtacaattgaaaagaaaaaattattattccagtggaaactgaaagtgacattcattgtgaaacaa 841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 77
Target Start/End: Complemental strand, 153382 - 153311
Alignment:
Q  6 ttgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaacaa 77  Q
    |||||||||||| ||| || |||| ||| || ||||||||| ||| ||||||||||||||||||||| ||||    
T  153382 ttgaagggtacaattggaatgaaatagttatcattgcattgaaaattgaaaatgacattcattttgacacaa 153311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 4635 - 4566
Alignment:
Q  5 attgaagggtacatttgaaaagaaaaagtcattattgcattggaaagtgaaaatgacattcattttgaaa 74  Q
    |||||| |||||| ||||||||||||| | |||||||||||  ||| | ||| |||||||||||||||||    
T  4635 attgaaaggtacaattgaaaagaaaaaattattattgcattaaaaattaaaagtgacattcattttgaaa 4566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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