View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13938_low_35 (Length: 274)
Name: NF13938_low_35
Description: NF13938
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13938_low_35 |
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Alignment Details
Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 786510 - 786265
Alignment:
| Q |
12 |
atgaagaggatcgctacttaaatcggtaatcggttgaggattgcatatgtcaagagtttgggctatactttcgacgaaaaactaagtttaaaattgagtc |
111 |
Q |
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| T |
786510 |
atgaagaggatcgctacttaaatcggtaatcggttgaggattgcatatgtcaagagtttgggctatactttcgacgaaaaactaagtttaaaattgagtc |
786411 |
T |
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| Q |
112 |
attgaccctcttttatcaataaaaaagtcataaaccagaattgattatcgtatttttgaatgcctttaatttgttgttacatactaaatttggtacaatg |
211 |
Q |
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| T |
786410 |
attgaccctcttttatcaataaaaaagtcataaaccagaattgattatcgtatttttgaatgcctttaatttgttgttacatactaaatttggtacaatg |
786311 |
T |
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| Q |
212 |
ttatatgatttggtgctaacttatcaagtgttctaactttccatag |
257 |
Q |
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| T |
786310 |
ttatatgatttggtgctaacttatcaagtgttctaactttccatag |
786265 |
T |
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