View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13939_low_3 (Length: 312)
Name: NF13939_low_3
Description: NF13939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13939_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 12 - 295
Target Start/End: Original strand, 19369361 - 19369646
Alignment:
| Q |
12 |
acagaggttgtggttctaagcttgttcaactcagatacaatcgagagataaagacaacaaagtttctacctaaaattaccatcagtacaatgattttgct |
111 |
Q |
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| T |
19369361 |
acagaggttgtggttctaagcttgttcaactcagatacaatcgagagataaagacaacaaagtttctacctaaaattaccatcagtacaatgattttgct |
19369460 |
T |
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| Q |
112 |
aaaatacaacaaattcaaggaacaccaataatgagctgggaaaat----tatatagccaggagaatgcatagcagaactaaactattgcgtataacagga |
207 |
Q |
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| T |
19369461 |
aaaatacaacaaattcaaggaacaccaat--tgagctgggaaaattatatatatagccaggagaatgcatagcagaactaaactattgcgtataacagga |
19369558 |
T |
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| Q |
208 |
gttattaatgtttgtgacaagcatatatcactaaaagactccataaagacaaaggtatagttcaagatgtataattcaaagaaagatc |
295 |
Q |
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| T |
19369559 |
gttattaatgtttgtgacaagcatatatcactaaaagactccataaagacaaaactatagttcaagatgtagaattcaaagaaagatc |
19369646 |
T |
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