View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1393_low_2 (Length: 575)

Name: NF1393_low_2
Description: NF1393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1393_low_2
NF1393_low_2
[»] chr6 (23 HSPs)
chr6 (279-570)||(28746794-28747094)
chr6 (186-414)||(28747295-28747529)
chr6 (55-169)||(6330133-6330247)
chr6 (55-169)||(11572143-11572257)
chr6 (55-169)||(13853591-13853705)
chr6 (55-169)||(28747132-28747246)
chr6 (56-169)||(26602341-26602454)
chr6 (57-169)||(2830353-2830465)
chr6 (57-169)||(8382969-8383081)
chr6 (55-169)||(35030999-35031113)
chr6 (56-169)||(8099548-8099661)
chr6 (56-169)||(9644714-9644827)
chr6 (56-169)||(9650731-9650844)
chr6 (56-169)||(33052793-33052906)
chr6 (57-169)||(8417793-8417905)
chr6 (55-169)||(6068584-6068698)
chr6 (72-169)||(6143572-6143669)
chr6 (55-131)||(3788093-3788169)
chr6 (57-157)||(17992018-17992118)
chr6 (55-134)||(22896515-22896594)
chr6 (94-169)||(13043776-13043851)
chr6 (87-169)||(6068970-6069052)
chr6 (55-112)||(7597052-7597109)
[»] chr5 (22 HSPs)
chr5 (55-169)||(11795186-11795300)
chr5 (56-169)||(9395368-9395481)
chr5 (56-169)||(36563537-36563650)
chr5 (56-166)||(41989406-41989516)
chr5 (56-169)||(13103042-13103155)
chr5 (57-169)||(23359960-23360072)
chr5 (57-169)||(37148955-37149067)
chr5 (60-169)||(4443978-4444087)
chr5 (57-166)||(6126845-6126954)
chr5 (56-169)||(13033069-13033182)
chr5 (57-169)||(20848092-20848203)
chr5 (55-169)||(17025642-17025756)
chr5 (55-163)||(21575970-21576078)
chr5 (56-169)||(26350349-26350462)
chr5 (55-169)||(37641971-37642086)
chr5 (84-169)||(583007-583092)
chr5 (103-169)||(13539913-13539975)
chr5 (68-129)||(36595785-36595846)
chr5 (56-129)||(966206-966279)
chr5 (109-169)||(38361743-38361803)
chr5 (72-124)||(9006897-9006949)
chr5 (91-151)||(40138824-40138884)
[»] chr3 (30 HSPs)
chr3 (55-169)||(51406691-51406805)
chr3 (57-169)||(38964410-38964522)
chr3 (55-169)||(46208048-46208162)
chr3 (55-169)||(49823379-49823493)
chr3 (56-169)||(10297997-10298110)
chr3 (57-169)||(19557052-19557164)
chr3 (57-169)||(21295326-21295438)
chr3 (55-169)||(22721949-22722063)
chr3 (55-169)||(37508939-37509053)
chr3 (56-169)||(4238612-4238725)
chr3 (56-169)||(8817385-8817498)
chr3 (56-169)||(17653730-17653843)
chr3 (56-169)||(40690995-40691108)
chr3 (57-169)||(2787832-2787944)
chr3 (57-169)||(34080030-34080142)
chr3 (57-165)||(48340419-48340527)
chr3 (55-169)||(8437443-8437557)
chr3 (55-169)||(9111492-9111606)
chr3 (72-169)||(44785411-44785508)
chr3 (56-169)||(36095679-36095792)
chr3 (60-169)||(42507358-42507467)
chr3 (57-169)||(6013336-6013448)
chr3 (72-169)||(42170361-42170458)
chr3 (72-169)||(33942947-33943044)
chr3 (104-169)||(35513491-35513556)
chr3 (52-101)||(36095766-36095815)
chr3 (57-151)||(9213552-9213646)
chr3 (104-169)||(8951943-8952008)
chr3 (56-112)||(9027141-9027197)
chr3 (56-116)||(45652068-45652128)
[»] chr8 (23 HSPs)
chr8 (56-169)||(12763653-12763766)
chr8 (56-169)||(32114474-32114587)
chr8 (56-169)||(39571202-39571315)
chr8 (55-169)||(54610-54724)
chr8 (55-169)||(2890160-2890274)
chr8 (56-169)||(7012189-7012302)
chr8 (56-169)||(7785777-7785890)
chr8 (56-169)||(32211362-32211475)
chr8 (56-169)||(43199353-43199466)
chr8 (57-169)||(3304278-3304390)
chr8 (57-169)||(6552673-6552785)
chr8 (57-169)||(33289261-33289373)
chr8 (55-169)||(25600998-25601112)
chr8 (56-169)||(7805698-7805811)
chr8 (56-169)||(15888351-15888464)
chr8 (56-169)||(44498186-44498299)
chr8 (63-169)||(12343146-12343252)
chr8 (56-169)||(13578875-13578988)
chr8 (57-169)||(31654631-31654743)
chr8 (56-134)||(27422243-27422321)
chr8 (56-169)||(8587188-8587301)
chr8 (55-126)||(33057655-33057726)
chr8 (125-169)||(4245649-4245693)
[»] chr4 (29 HSPs)
chr4 (56-169)||(33621814-33621927)
chr4 (57-169)||(3372139-3372251)
chr4 (57-169)||(6121893-6122005)
chr4 (57-169)||(43900567-43900679)
chr4 (57-168)||(42797751-42797862)
chr4 (55-169)||(3992994-3993108)
chr4 (56-169)||(48336281-48336394)
chr4 (57-169)||(20538686-20538798)
chr4 (57-169)||(47833629-47833741)
chr4 (55-169)||(3904681-3904795)
chr4 (55-169)||(53337388-53337502)
chr4 (56-169)||(47838616-47838729)
chr4 (57-169)||(46797743-46797855)
chr4 (55-169)||(24704388-24704502)
chr4 (56-169)||(41469765-41469878)
chr4 (55-169)||(52756693-52756807)
chr4 (56-169)||(3422079-3422191)
chr4 (56-169)||(5986894-5987007)
chr4 (57-169)||(51894582-51894694)
chr4 (58-169)||(40913190-40913301)
chr4 (72-169)||(7579328-7579425)
chr4 (76-169)||(33551219-33551312)
chr4 (71-169)||(26231595-26231693)
chr4 (52-169)||(41615671-41615788)
chr4 (56-169)||(17344231-17344344)
chr4 (72-169)||(50430433-50430530)
chr4 (103-169)||(29845663-29845728)
chr4 (87-169)||(31013039-31013121)
chr4 (57-122)||(38160372-38160437)
[»] chr1 (26 HSPs)
chr1 (57-169)||(11795951-11796063)
chr1 (56-169)||(1050906-1051019)
chr1 (56-169)||(14984855-14984968)
chr1 (57-169)||(27159358-27159470)
chr1 (57-169)||(31842795-31842907)
chr1 (57-169)||(39401966-39402078)
chr1 (57-169)||(44668093-44668205)
chr1 (55-169)||(25694337-25694451)
chr1 (55-169)||(47216697-47216811)
chr1 (60-169)||(9981665-9981774)
chr1 (57-169)||(26471065-26471177)
chr1 (57-169)||(47777481-47777593)
chr1 (63-169)||(44955212-44955318)
chr1 (56-169)||(34042714-34042827)
chr1 (56-169)||(47588336-47588449)
chr1 (56-165)||(47969717-47969826)
chr1 (56-169)||(12483627-12483740)
chr1 (56-169)||(17556770-17556884)
chr1 (77-169)||(23278021-23278113)
chr1 (56-169)||(11897072-11897185)
chr1 (57-169)||(11989799-11989911)
chr1 (55-111)||(12213550-12213606)
chr1 (55-131)||(37552197-37552273)
chr1 (57-169)||(16448108-16448220)
chr1 (95-169)||(12213512-12213586)
chr1 (56-113)||(11897053-11897110)
[»] chr7 (23 HSPs)
chr7 (55-169)||(9268774-9268888)
chr7 (56-169)||(1738446-1738559)
chr7 (56-169)||(7240767-7240880)
chr7 (57-169)||(46840878-46840990)
chr7 (56-169)||(7482243-7482356)
chr7 (56-169)||(38063912-38064025)
chr7 (57-169)||(22285717-22285829)
chr7 (57-169)||(23314139-23314251)
chr7 (57-169)||(31319399-31319511)
chr7 (55-169)||(1565727-1565841)
chr7 (56-169)||(36583413-36583526)
chr7 (57-169)||(94318-94430)
chr7 (56-169)||(28536750-28536863)
chr7 (72-169)||(36016211-36016308)
chr7 (57-169)||(38441478-38441590)
chr7 (63-166)||(33418397-33418500)
chr7 (56-169)||(4790266-4790379)
chr7 (57-166)||(9575430-9575539)
chr7 (57-114)||(7269478-7269535)
chr7 (69-126)||(36033238-36033295)
chr7 (87-122)||(958461-958496)
chr7 (72-134)||(40840134-40840196)
chr7 (72-128)||(7269420-7269476)
[»] chr2 (28 HSPs)
chr2 (55-169)||(44398704-44398818)
chr2 (56-169)||(3055576-3055689)
chr2 (56-169)||(37990012-37990125)
chr2 (56-169)||(41478638-41478751)
chr2 (57-169)||(13197710-13197822)
chr2 (57-169)||(15896860-15896972)
chr2 (55-169)||(44397565-44397679)
chr2 (56-169)||(9047754-9047867)
chr2 (57-169)||(15372244-15372356)
chr2 (55-169)||(13344502-13344616)
chr2 (55-169)||(38917520-38917634)
chr2 (56-169)||(6648518-6648631)
chr2 (56-169)||(16243782-16243895)
chr2 (56-169)||(37666609-37666722)
chr2 (57-169)||(12337937-12338049)
chr2 (57-169)||(16044317-16044429)
chr2 (71-169)||(4683946-4684044)
chr2 (56-169)||(41492895-41493008)
chr2 (55-169)||(30099180-30099294)
chr2 (60-159)||(44804581-44804680)
chr2 (69-165)||(12170411-12170507)
chr2 (60-168)||(16734802-16734910)
chr2 (88-156)||(41453090-41453158)
chr2 (98-131)||(10061624-10061657)
chr2 (56-101)||(15372225-15372270)
chr2 (92-124)||(7700950-7700982)
chr2 (56-124)||(13952533-13952601)
chr2 (56-124)||(14093740-14093808)
[»] scaffold0204 (1 HSPs)
scaffold0204 (56-169)||(23803-23916)
[»] scaffold0482 (1 HSPs)
scaffold0482 (56-169)||(12878-12991)
[»] scaffold0464 (1 HSPs)
scaffold0464 (56-169)||(6130-6243)
[»] scaffold0009 (1 HSPs)
scaffold0009 (57-169)||(49523-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (72-169)||(1353-1450)
[»] scaffold0011 (1 HSPs)
scaffold0011 (56-170)||(231302-231416)
[»] scaffold0415 (1 HSPs)
scaffold0415 (103-169)||(13773-13838)


Alignment Details
Target: chr6 (Bit Score: 245; Significance: 1e-135; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 279 - 570
Target Start/End: Complemental strand, 28747094 - 28746794
Alignment:
Q  279 cttatttaatactagaataagagagcaaaat---------ccatatctataatttagcgcaaattaatttcttatctctcaagtagctagcttttctcaa 369  Q
    |||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28747094 cttatttaatactagaataagagagcaaaataattttcatccatatatataatttagcgcaaattaatttcttatctctcaagtagctagcttttctcaa 28746995  T
Q  370 tcatcaaaatacaatgcatctacctatcaaaacaaattttctaaatttcaccaaatattctgacgcaaatagtaactaatgacaattagttatgtgtcaa 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  28746994 tcatcaaaatacaatgcatctacctatcaaaacaaattttctaaatttcaccaaatattctgacgcaaatagtaactaatgacaatcagctatgtgtcaa 28746895  T
Q  470 attttaacacatgttctagaccggatgtgatgctattgtcaccaccttctaattaatctctgctcttctatccttttatgttttacagtgattgatttaa 569  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28746894 attttaacacttgttctagactggatgtgatgctattgtcaccaccttctaattaatctctgctcttcaatccttttatgttttacagtgattgatttaa 28746795  T
Q  570 t 570  Q
    |    
T  28746794 t 28746794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 186 - 414
Target Start/End: Original strand, 28747295 - 28747529
Alignment:
Q  186 ttatataaggttgaagttcaaacttcgaacacctcacttttcactttaaaggtaagaccatcgaggcaaaacacaaatagtgtaaacacctcgcttattt 285  Q
    ||||||||| ||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  28747295 ttatataagattgaagttcgaacttcgaacccctcgcttttcactttaaaggtaaggccatcgaggcaaaacacaaatagtgtaaacacctcacttattt 28747394  T
Q  286 aatactagaataagagagcaaaat---------ccatatct-ataatttagcgcaaattaatttcttatctctcaagtagctagcttttctcaatcatca 375  Q
    ||||||||||||||||||||||||         |||||  | || |||||| ||||||||| |||  |||| |||||    ||| |||||||| ||||||    
T  28747395 aatactagaataagagagcaaaataatcttcacccataaataatgatttagagcaaattaagttcccatctttcaag----tagtttttctcagtcatca 28747490  T
Q  376 aaatacaatgcatctacctatcaaaacaaattttctaaa 414  Q
    ||||||||||||||||||||| |||| ||| ||||||||    
T  28747491 aaatacaatgcatctacctattaaaataaactttctaaa 28747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 6330247 - 6330133
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  6330247 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 6330148  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  6330147 aaatttctcttataa 6330133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 11572143 - 11572257
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  11572143 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11572242  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  11572243 aaatttctcttataa 11572257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 13853591 - 13853705
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  13853591 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 13853690  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  13853691 aaatttctcttataa 13853705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 28747132 - 28747246
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||| ||||| ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||||||    
T  28747132 tatactcccttcagtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatct 28747231  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  28747232 aaatttctcttataa 28747246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 26602454 - 26602341
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  26602454 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26602355  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  26602354 aatttctcttataa 26602341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 2830465 - 2830353
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  2830465 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2830366  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  2830365 atttctcttataa 2830353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 8382969 - 8383081
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  8382969 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 8383068  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  8383069 atttctcttataa 8383081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 35030999 - 35031113
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||| ||||| ||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  35030999 tatacttcctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 35031098  T
Q  155 aaatttctcttataa 169  Q
    |||||| ||||||||    
T  35031099 aaatttttcttataa 35031113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 8099661 - 8099548
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||||||  ||| ||||||||||| |||    
T  8099661 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 8099562  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  8099561 aatttctcttataa 8099548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 9644827 - 9644714
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | || |||||| |||    
T  9644827 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9644728  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  9644727 aatttctcttataa 9644714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 9650844 - 9650731
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | || |||||| |||    
T  9650844 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 9650745  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  9650744 aatttctcttataa 9650731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 33052793 - 33052906
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||| ||| ||| ||||||||||| |||||| ||| || |||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  33052793 atactccatccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33052892  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  33052893 aatttctcttataa 33052906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 8417793 - 8417905
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||| | ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||||||  ||| ||||||||||| ||||    
T  8417793 tactcccttcggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaa 8417892  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  8417893 atttctcttataa 8417905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 6068698 - 6068584
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| ||||||  || ||||||| |||||||||||||||||||||||| |||||||  ||| |||||| |||| ||    
T  6068698 tatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacct 6068599  T
Q  155 aaatttctcttataa 169  Q
    |||||| ||||||||    
T  6068598 aaatttttcttataa 6068584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 6143669 - 6143572
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||  ||||||| |||||||||||||||||||||||| |||||||  ||| ||||||||||| |||||||||||||||||    
T  6143669 tatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataa 6143572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 3788169 - 3788093
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtcca 131  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  3788169 tatactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtcca 3788093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 17992118 - 17992018
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||| | ||| ||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||| |||||||  ||| |||||| |||| ||||    
T  17992118 tactcccttcggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaa 17992019  T
Q  157 a 157  Q
    |    
T  17992018 a 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 22896594 - 22896515
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaat 134  Q
    ||||||||| || ||| ||||||||||| ||||||  || ||||||| ||||||||||||||||||||||||||||||||    
T  22896594 tatactcccgccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaat 22896515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 13043851 - 13043776
Alignment:
Q  94 taacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||||| |||||||||||||||||||||||| | |||||  ||| | ||||||||| |||||||||||||||||    
T  13043851 taacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataa 13043776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 169
Target Start/End: Original strand, 6068970 - 6069052
Alignment:
Q  87 tttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||| |||||||  ||| ||||| ||||||||||| || ||||||  ||| ||||||||||| |||||| ||| ||||||    
T  6068970 tttaggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataa 6069052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 7597109 - 7597052
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatc 112  Q
    ||||||||||||| |||||||||||||| ||  ||  |||||||||| ||||||||||    
T  7597109 tatactccctccaatcttatttataagagaaagttgtgttaacaaaagttgatgtatc 7597052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 11795300 - 11795186
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||||||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  11795300 tatactccctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 11795201  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  11795200 aaatttctcttataa 11795186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 9395481 - 9395368
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  9395481 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 9395382  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  9395381 aatttctcttataa 9395368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 36563537 - 36563650
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  36563537 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36563636  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  36563637 aatttctcttataa 36563650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 41989406 - 41989516
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  41989406 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41989505  T
Q  156 aatttctctta 166  Q
    |||||||||||    
T  41989506 aatttctctta 41989516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 13103155 - 13103042
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| |||    
T  13103155 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13103056  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  13103055 aatttctcttataa 13103042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 23360072 - 23359960
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||| ||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23359973  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  23359972 atttctcttataa 23359960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 37148955 - 37149067
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||| | |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  37148955 tactccctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 37149054  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  37149055 atttctcttataa 37149067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 4444087 - 4443978
Alignment:
Q  60 tccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatt 159  Q
    ||||||| ||||||||||||||| |||||||| | ||||||| |||||||||||| |||||||||||||| ||||  ||| ||||||||||| |||||||    
T  4444087 tccctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatt 4443988  T
Q  160 tctcttataa 169  Q
    ||||||||||    
T  4443987 tctcttataa 4443978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 6126954 - 6126845
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||| |||||||||  ||| | ||||||||||||||    
T  6126954 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaa 6126855  T
Q  157 atttctctta 166  Q
    ||||||||||    
T  6126854 atttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 13033182 - 13033069
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    |||||||||||  || ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| |||    
T  13033182 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 13033083  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  13033082 aatttctcttataa 13033069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 20848203 - 20848092
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||  ||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||| ||||    
T  20848203 tactccctccggtcctatttataagagaattttgggc-aacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaa 20848105  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  20848104 atttctcttataa 20848092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 17025756 - 17025642
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||  ||||  ||| |||||||| || ||    
T  17025756 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacct 17025657  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  17025656 aaatttctcttataa 17025642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 21576078 - 21575970
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| | | ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| ||    
T  21576078 tatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacct 21575979  T
Q  155 aaatttctc 163  Q
    |||||||||    
T  21575978 aaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 26350349 - 26350462
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||| | ||||||   | || |||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  26350349 atactccctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 26350448  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  26350449 aatttctcttataa 26350462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 37642086 - 37641971
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttac-ttttgttgatc 153  Q
    |||||||||||| ||| ||||||||||| |||||| ||| || |||| ||||||||||||||||||||||||||||| ||  ||| || |||| |||| |    
T  37642086 tatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacc 37641987  T
Q  154 taaatttctcttataa 169  Q
    ||||||||||||||||    
T  37641986 taaatttctcttataa 37641971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 583092 - 583007
Alignment:
Q  84 aattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||| |||||| |||||||||||||||||    
T  583092 aattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataa 583007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 13539913 - 13539975
Alignment:
Q  103 ttgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||||||||||||||||||| ||    ||||| ||||||||| |||||||||||||||||    
T  13539913 ttgatgtatctagttaaaaattcagtctaa----atttatttttgttgacctaaatttctcttataa 13539975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 36595785 - 36595846
Alignment:
Q  68 gtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtc 129  Q
    ||||||||||||||| ||  |||||| |||||||||||||||||||  ||||||||||||||    
T  36595785 gtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtc 36595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 966279 - 966206
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtc 129  Q
    |||| |||||||||| ||||||||||| || ||| | | |||||||||  |||||||| |||||||||||||||    
T  966279 ataccccctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtc 966206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 38361743 - 38361803
Alignment:
Q  109 tatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||| |||||||||||||||||||  ||| |||||| |||| |||||||| ||||||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataa 38361803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 9006897 - 9006949
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaatt 124  Q
    ||||||||| | | |||||||| ||||||| ||||||||||||||| ||||||    
T  9006897 tatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 40138824 - 40138884
Alignment:
Q  91 ggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttga 151  Q
    |||||| |||| ||||||||| |  ||||||||||||| ||||| |||||| |||||||||    
T  40138824 ggttaataaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttga 40138884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 51406805 - 51406691
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  51406805 tatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 51406706  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  51406705 aaatttctcttataa 51406691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 38964522 - 38964410
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  38964522 tactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 38964423  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  38964422 atttctcttataa 38964410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 46208162 - 46208048
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| ||    
T  46208162 tatactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacct 46208063  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  46208062 aaatttctcttataa 46208048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 49823379 - 49823493
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  49823379 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 49823478  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  49823479 aaatttctcttataa 49823493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 10298110 - 10297997
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  10298110 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 10298011  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  10298010 aatttctcttataa 10297997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 19557052 - 19557164
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  19557052 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 19557151  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  19557152 atttctcttataa 19557164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 21295326 - 21295438
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| ||||    
T  21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaa 21295425  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  21295426 atttctcttataa 21295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 22722063 - 22721949
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||| ||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  22722063 tatactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 22721964  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  22721963 aaatttctcttataa 22721949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 37509053 - 37508939
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||| ||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  37509053 tatactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 37508954  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  37508953 aaatttctcttataa 37508939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 4238725 - 4238612
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||| ||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 4238626  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  4238625 aatttctcttataa 4238612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 8817385 - 8817498
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||| ||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  8817385 atactccttccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 8817484  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  8817485 aatttctcttataa 8817498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 17653843 - 17653730
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||| ||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 17653744  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  17653743 aatttctcttataa 17653730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 40690995 - 40691108
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||| | |||    
T  40690995 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaaccta 40691094  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  40691095 aatttctcttataa 40691108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 2787832 - 2787944
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| | ||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  2787832 tactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 2787931  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  2787932 atttctcttataa 2787944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 34080030 - 34080142
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||| ||||||||||||||||||||  ||| ||||||||||| ||||    
T  34080030 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaa 34080129  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  34080130 atttctcttataa 34080142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 165
Target Start/End: Complemental strand, 48340527 - 48340419
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  48340527 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 48340428  T
Q  157 atttctctt 165  Q
    |||||||||    
T  48340427 atttctctt 48340419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 8437557 - 8437443
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| ||||||  || ||||||| ||||||||||||||||||||||||||||||||  ||| |||||| |||| ||    
T  8437557 tatactccctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 8437458  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  8437457 aaatttctcttataa 8437443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 9111492 - 9111606
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||| ||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||||  ||| ||||||||||| ||    
T  9111492 tatattccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacct 9111591  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  9111592 aaatttctcttataa 9111606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 44785411 - 44785508
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  44785411 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 44785508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 36095679 - 36095792
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    |||||| |||| |||||||||| |||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  36095679 atactcactccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 36095778  T
Q  156 aatttctcttataa 169  Q
    ||||| ||||||||    
T  36095779 aatttatcttataa 36095792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 42507358 - 42507467
Alignment:
Q  60 tccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatt 159  Q
    ||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||| ||||||||||||||||  ||| ||||||||||| |||||||    
T  42507358 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatt 42507457  T
Q  160 tctcttataa 169  Q
    ||| ||||||    
T  42507458 tctattataa 42507467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 6013336 - 6013448
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| |  || ||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  6013336 tactccctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6013435  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  6013436 atttctcttataa 6013448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 42170361 - 42170458
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||| ||||||| ||||||||||| |||||||||||| |||||||  ||| ||||||||||| |||||||||||||||||    
T  42170361 tatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataa 42170458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 33942947 - 33943044
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| ||  || ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||| ||||| ||||||    
T  33942947 tatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataa 33943044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 35513556 - 35513491
Alignment:
Q  104 tgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  35513556 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 35513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 36095815 - 36095766
Alignment:
Q  52 gtgtatactccctccagtcttatttataagataattttaggttaacaaaa 101  Q
    ||||||||||||||| ||| |||||||||||||| ||||||| |||||||    
T  36095815 gtgtatactccctccggtcctatttataagataaatttaggtcaacaaaa 36095766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 9213646 - 9213552
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttga 151  Q
    |||||||||| ||| ||||||| ||| || ||||||| ||||||||||||||||| | |||| ||| | |||||| ||  ||  |||||||||||    
T  9213646 tactccctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttga 9213552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 8951943 - 8952008
Alignment:
Q  104 tgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||||| | ||||||||||||||||||||  ||| |||||||| |||  || ||||||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataa 8952008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 9027141 - 9027197
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatc 112  Q
    ||||||||||| ||| ||||||||||||||  || ||| ||||||| ||||||||||    
T  9027141 atactccctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 45652068 - 45652128
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagt 116  Q
    ||||||||||||||| ||||||||||| |  |||  || ||||||||| ||||||||||||    
T  45652068 atactccctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 12763653 - 12763766
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  12763653 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12763752  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  12763753 aatttctcttataa 12763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 32114474 - 32114587
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  32114474 atactccctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 32114573  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  32114574 aatttctcttataa 32114587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 39571202 - 39571315
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||||||    
T  39571202 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatcta 39571301  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  39571302 aatttctcttataa 39571315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 54610 - 54724
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  54610 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 54709  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  54710 aaatttctcttataa 54724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 2890160 - 2890274
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  2890160 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 2890259  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  2890260 aaatttctcttataa 2890274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 7012302 - 7012189
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||| ||||| ||| ||||||||||| |||||| | | ||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  7012302 atacttcctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatcta 7012203  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  7012202 aatttctcttataa 7012189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 7785777 - 7785890
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  7785777 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7785876  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  7785877 aatttctcttataa 7785890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 32211362 - 32211475
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||| | ||||||||| |||    
T  32211362 atactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 32211461  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  32211462 aatttctcttataa 32211475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 43199353 - 43199466
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  43199353 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 43199452  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  43199453 aatttctcttataa 43199466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 3304278 - 3304390
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  3304278 tactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3304377  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  3304378 atttctcttataa 3304390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 6552785 - 6552673
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  6552785 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 6552686  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  6552685 atttctcttataa 6552673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 33289261 - 33289373
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  33289261 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaa 33289360  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  33289361 atttctcttataa 33289373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 25600998 - 25601112
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| || |||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  25600998 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 25601097  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  25601098 aaatttctcttataa 25601112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 7805698 - 7805811
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| | ||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  7805698 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7805797  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  7805798 aatttctcttataa 7805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 15888351 - 15888464
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||||||  ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||||||  ||| ||||||||||| |||    
T  15888351 atactccctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgaccta 15888450  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  15888451 aatttctcttataa 15888464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 44498186 - 44498299
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| || |||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  44498186 atactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 44498285  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  44498286 aatttctcttataa 44498299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 12343146 - 12343252
Alignment:
Q  63 ctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttct 162  Q
    |||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  163 cttataa 169  Q
    |||||||    
T  12343246 cttataa 12343252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 13578988 - 13578875
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||| ||||||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||||  ||| |||||| |||| |||    
T  13578988 atactccatccagtcatatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgaccta 13578889  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  13578888 aatttctcttataa 13578875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 31654743 - 31654631
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||| ||||| ||| ||||||||| | |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  31654743 tacttcctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31654644  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  31654643 atttctcttataa 31654631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 27422321 - 27422243
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaat 134  Q
    ||||||||| | ||| ||||||||||| || ||| ||| |||||||||  |||||||| ||||||||||||||||||||    
T  27422321 atactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaat 27422243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 8587301 - 8587188
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||| ||||| ||||||||||||||| ||  ||  || || |||| |||||||||||||||||||||| |||| ||||  ||  ||||||||||| | |    
T  8587301 atacttcctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaa 8587202  T
Q  156 aatttctcttataa 169  Q
    | ||||||||||||    
T  8587201 actttctcttataa 8587188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 33057726 - 33057655
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattca 126  Q
    |||||||| ||| ||||||||||||||| ||  || ||| ||||||||||||||||||| ||||||| ||||    
T  33057726 tatactccatccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttca 33057655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 4245649 - 4245693
Alignment:
Q  125 cagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||  ||| ||||||||||| |||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataa 4245693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 5e-36; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 33621927 - 33621814
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  33621927 atactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 33621828  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  33621827 aatttctcttataa 33621814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 3372251 - 3372139
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  3372251 tactccctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 3372152  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  3372151 atttctcttataa 3372139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 6121893 - 6122005
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  6121893 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaa 6121992  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  6121993 atttctcttataa 6122005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 43900679 - 43900567
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||| ||||| ||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  43900679 tacttcctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaa 43900580  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  43900579 atttctcttataa 43900567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 42797862 - 42797751
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 42797763  T
Q  157 atttctcttata 168  Q
    ||||||||||||    
T  42797762 atttctcttata 42797751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 3993108 - 3992994
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||||||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |     
T  3993108 tatactccctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccg 3993009  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  3993008 aaatttctcttataa 3992994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 48336394 - 48336281
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  48336394 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 48336295  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  48336294 aatttctcttataa 48336281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 20538686 - 20538798
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  20538686 tactccctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 20538785  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  20538786 atttctcttataa 20538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 47833741 - 47833629
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  47833741 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 47833642  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  47833641 atttctcttataa 47833629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 3904681 - 3904795
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||  ||| ||||||||||| ||    
T  3904681 tatactccctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacct 3904780  T
Q  155 aaatttctcttataa 169  Q
    |||||||| ||||||    
T  3904781 aaatttcttttataa 3904795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 53337502 - 53337388
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| || |||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  53337502 tatactccctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 53337403  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  53337402 aaatttctcttataa 53337388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 47838616 - 47838729
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| | |    
T  47838616 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccga 47838715  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  47838716 aatttctcttataa 47838729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 46797855 - 46797743
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  46797855 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46797756  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  46797755 atttctcttataa 46797743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 24704502 - 24704388
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    ||||||||||||  || ||||||||||| |||||| ||| ||||||| || |||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  24704502 tatactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 24704403  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  24704402 aaatttctcttataa 24704388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 41469765 - 41469878
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| |||    
T  41469765 atactccctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgaccta 41469864  T
Q  156 aatttctcttataa 169  Q
    ||||||| ||||||    
T  41469865 aatttcttttataa 41469878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 52756807 - 52756693
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||| | ||| ||||||||| | |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||| |||||| ||    
T  52756807 tatactcccttcggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacct 52756708  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  52756707 aaatttctcttataa 52756693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 3422191 - 3422079
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||||  ||| | ||||||||| |||    
T  3422191 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgaccta 3422093  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  3422092 aatttctcttataa 3422079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 5987007 - 5986894
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    |||||| |||| ||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||||||||||||  ||| ||||||||||| |||    
T  5987007 atactctctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgaccta 5986908  T
Q  156 aatttctcttataa 169  Q
     |||||||||||||    
T  5986907 tatttctcttataa 5986894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 51894582 - 51894694
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||| |||||||||||||||||||   ||| ||||||||||| ||||    
T  51894582 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaa 51894681  T
Q  157 atttctcttataa 169  Q
    |||| ||||||||    
T  51894682 atttttcttataa 51894694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 40913190 - 40913301
Alignment:
Q  58 actccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaa 157  Q
    ||||||||| ||| ||||||||||| || ||| | | ||||||| ||||| |||| |||||||||||||||||||||  ||| |||||||||||||||||    
T  40913190 actccctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaa 40913289  T
Q  158 tttctcttataa 169  Q
    ||||||||||||    
T  40913290 tttctcttataa 40913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 7579425 - 7579328
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||||||  ||| ||||||||| | |||||||||||||||||    
T  7579425 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataa 7579328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 33551312 - 33551219
Alignment:
Q  76 tataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||| |||||| |||| |||||| ||||||||||||||||||||||||||| ||||  ||| ||||||||||| |||||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataa 33551219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 26231693 - 26231595
Alignment:
Q  71 ttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||| ||||||| |||||| |||| |||||| ||||| ||||||||||||||||||||||||||  |||  |||||||||| |||||||||||||||||    
T  26231693 ttatatataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataa 26231595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 52 - 169
Target Start/End: Original strand, 41615671 - 41615788
Alignment:
Q  52 gtgtatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttga 151  Q
    |||| |||||| ||| ||| ||||||||||| ||  || | | ||||||| ||||||||| |||||||||||| |||||||||  ||| |||||||||||    
T  41615671 gtgtgtactccatccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttga 41615770  T
Q  152 tctaaatttctcttataa 169  Q
     |||| ||||||||||||    
T  41615771 cctaattttctcttataa 41615788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 17344344 - 17344231
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    |||||||||||| |||||||||||||| || ||| | | ||||||| ||||||||||   ||||||||||||| || ||  ||  |||||||||||| ||    
T  17344344 atactccctccaatcttatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgattta 17344245  T
Q  156 aatttctcttataa 169  Q
    | ||||||||||||    
T  17344244 actttctcttataa 17344231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 50430433 - 50430530
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||||||||||  ||| ||| ||||||||||||||||||| |||||||||||| |||||||  ||  ||||||||||| | || || |||||||||    
T  50430433 tatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataa 50430530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 29845728 - 29845663
Alignment:
Q  103 ttgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||| |||||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||    
T  29845728 ttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 29845663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 31013121 - 31013039
Alignment:
Q  87 tttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||| |||||||  |||||||||||||||| |||| |  ||||||  || ||||||||||||||||||| ||| ||||||    
T  31013121 tttaggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataa 31013039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 38160372 - 38160437
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaa 122  Q
    ||||| |||||||| ||||||||||| |  ||||||| |||||||||||||||||||  |||||||    
T  38160372 tactctctccagtcatatttataagagagatttaggtcaacaaaaattgatgtatctgattaaaaa 38160437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 11796063 - 11795951
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  11796063 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaa 11795964  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  11795963 atttctcttataa 11795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 1051019 - 1050906
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||    
T  1051019 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgaccta 1050920  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  1050919 aatttctcttataa 1050906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 14984968 - 14984855
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  14984968 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 14984869  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  14984868 aatttctcttataa 14984855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 27159358 - 27159470
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  27159358 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 27159457  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  27159458 atttctcttataa 27159470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 31842795 - 31842907
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  31842795 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31842894  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  31842895 atttctcttataa 31842907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 39401966 - 39402078
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  39401966 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 39402065  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  39402066 atttctcttataa 39402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 44668093 - 44668205
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  44668093 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 44668192  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  44668193 atttctcttataa 44668205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 25694451 - 25694337
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||| |||||||  ||| |||||| |||||||    
T  25694451 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatct 25694352  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  25694351 aaatttctcttataa 25694337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 47216697 - 47216811
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||  ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  47216697 tatactccctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 47216796  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  47216797 aaatttctcttataa 47216811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 9981774 - 9981665
Alignment:
Q  60 tccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatt 159  Q
    ||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||    
T  9981774 tccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 9981675  T
Q  160 tctcttataa 169  Q
    ||||||||||    
T  9981674 tctcttataa 9981665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 26471065 - 26471177
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  26471065 tactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 26471164  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  26471165 atttctcttataa 26471177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 47777481 - 47777593
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||| ||||||||||||||||  ||| ||||||||||| ||||    
T  47777481 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaa 47777580  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  47777581 atttctcttataa 47777593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 63 - 169
Target Start/End: Original strand, 44955212 - 44955318
Alignment:
Q  63 ctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttct 162  Q
    |||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||| |    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  163 cttataa 169  Q
    |||||||    
T  44955312 cttataa 44955318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 34042827 - 34042714
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||  ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | ||||||||| |||    
T  34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgaccta 34042728  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  34042727 aatttctcttataa 34042714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 47588336 - 47588449
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||| | || |||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| |||    
T  47588336 atactcccttcggttttatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgaccta 47588435  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  47588436 aatttctcttataa 47588449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 47969826 - 47969717
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||| |||||||| | | ||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||| |||    
T  47969826 atactccctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgaccta 47969727  T
Q  156 aatttctctt 165  Q
    ||||||||||    
T  47969726 aatttctctt 47969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 12483627 - 12483740
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||| ||||||||||| ||||  ||| ||||||||||| |||    
T  12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgaccta 12483726  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  12483727 aatttctcttataa 12483740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 17556884 - 17556770
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtattt-acttttgttgatct 154  Q
    ||||||||||| ||| ||||||||||| ||  || ||| ||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||||| ||    
T  17556884 atactccctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacct 17556785  T
Q  155 aaatttctcttataa 169  Q
    || ||||||||||||    
T  17556784 aactttctcttataa 17556770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 23278021 - 23278113
Alignment:
Q  77 ataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | ||||||||| |||||||||||||||||    
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataa 23278113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 11897185 - 11897072
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| || ||| ||| ||||||| ||||||||||  |||||||||||||| || ||  ||  ||||||||||| |||    
T  11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgaccta 11897086  T
Q  156 aatttctcttataa 169  Q
    | ||||||||||||    
T  11897085 actttctcttataa 11897072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 11989911 - 11989799
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||| | || |||  || || |||||||||||||| | |||||||||||||||||||| ||||   ||||||||| | ||    
T  11989911 tactccctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaa 11989812  T
Q  157 atttctcttataa 169  Q
     ||||||||||||    
T  11989811 ctttctcttataa 11989799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 12213606 - 12213550
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtat 111  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||    
T  12213606 tatactccctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtat 12213550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 37552273 - 37552197
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtcca 131  Q
    ||||||||| || ||| ||||||||||| || ||| ||| |||||||||  |||||||| |||||||||||||||||    
T  37552273 tatactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtcca 37552197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 16448108 - 16448220
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    ||||| |||| |||||||||||| |  ||| || ||| ||||||| || |||||||| ||| ||||||||||||| ||  ||  ||||||||||| | ||    
T  16448108 tactcactccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaa 16448207  T
Q  157 atttctcttataa 169  Q
     ||||||||||||    
T  16448208 ctttctcttataa 16448220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 12213512 - 12213586
Alignment:
Q  95 aacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||||| ||| |||||||||||||| || ||||  ||| | ||||||||| ||||  |||||||||||    
T  12213512 aacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataa 12213586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 11897053 - 11897110
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatct 113  Q
    ||||||||||| ||| ||||||||||| ||  |||||| ||||||| |||||||||||    
T  11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 3e-34; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 9268888 - 9268774
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  9268888 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 9268789  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  9268788 aaatttctcttataa 9268774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 1738446 - 1738559
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  1738446 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 1738545  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  1738546 aatttctcttataa 1738559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 7240880 - 7240767
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  7240880 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 7240781  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  7240780 aatttctcttataa 7240767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 46840990 - 46840878
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  46840990 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 46840891  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  46840890 atttctcttataa 46840878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 7482356 - 7482243
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||||  ||| ||||||||||| |||    
T  7482356 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 7482257  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  7482256 aatttctcttataa 7482243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 38063912 - 38064025
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||  ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  38063912 atactccctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 38064011  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  38064012 aatttctcttataa 38064025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 22285829 - 22285717
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| ||||    
T  22285829 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaa 22285730  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  22285729 atttctcttataa 22285717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 23314139 - 23314251
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  23314139 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 23314238  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  23314239 atttctcttataa 23314251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 31319399 - 31319511
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||  ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 31319498  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  31319499 atttctcttataa 31319511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 1565727 - 1565841
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||| | ||  ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  1565727 tatactcccttcggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 1565826  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  1565827 aaatttctcttataa 1565841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 36583526 - 36583413
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    |||||||||||  || ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||| |||||||||  ||| ||||||||||| |||    
T  36583526 atactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgaccta 36583427  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  36583426 aatttctcttataa 36583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 94318 - 94430
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    ||||||||||  || ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||    
T  94318 tactccctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaa 94417  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  94418 atttctcttataa 94430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 28536750 - 28536863
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| | | || |||| |||||||||||||||||||||||| |||||||  ||| ||||||||||| |||    
T  28536750 atactccctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgaccta 28536849  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  28536850 aatttctcttataa 28536863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 36016211 - 36016308
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  36016211 tatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 36016308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 38441590 - 38441478
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||| ||||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||||  |||    
T  38441590 tacttcctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataa 38441491  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  38441490 atttctcttataa 38441478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 33418500 - 33418397
Alignment:
Q  63 ctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttct 162  Q
    |||| ||| ||||||||||| |||||| ||| ||||||| |||||||||||| |||||||||||||||||||  ||| ||||||||||| ||||||||||    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  163 ctta 166  Q
    ||||    
T  33418400 ctta 33418397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 4790379 - 4790266
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||| ||||| ||| ||||||||||| |||||| ||| || |||| |||||||||||||||||||||| |||||||||  ||| | ||||||||| |||    
T  4790379 atacttcctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgaccta 4790280  T
Q  156 aatttctcttataa 169  Q
    ||||| ||||||||    
T  4790279 aatttttcttataa 4790266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 9575539 - 9575430
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||| | ||| ||||||||||| ||  || ||| ||||||| ||||||||||||||||||||||||||| ||||   || ||||||||||| | ||    
T  9575539 tactcccttcggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaa 9575440  T
Q  157 atttctctta 166  Q
     |||||||||    
T  9575439 ctttctctta 9575430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 7269535 - 7269478
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatcta 114  Q
    |||||||||| ||||||||||||||| ||  || ||| ||||||||||||||||||||    
T  7269535 tactccctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 36033238 - 36033295
Alignment:
Q  69 tcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattca 126  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||  | |||||||||    
T  36033238 tcttatttataagataaatttaggtcaacaaaagttgatgtatctgatcaaaaattca 36033295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 122
Target Start/End: Original strand, 958461 - 958496
Alignment:
Q  87 tttaggttaacaaaaattgatgtatctagttaaaaa 122  Q
    |||||||||||||||| |||||||||||||||||||    
T  958461 tttaggttaacaaaaactgatgtatctagttaaaaa 958496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 40840134 - 40840196
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaat 134  Q
    ||||||||||| || |||  || ||||||| ||||||||  ||||||||||||||||||||||    
T  40840134 tatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaat 40840196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 7269420 - 7269476
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagt 128  Q
    ||||||||||| ||  || ||||||||||| |||||| |||| ||||||||||||||    
T  7269420 tatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagt 7269476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 44398818 - 44398704
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  44398818 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44398719  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  44398718 aaatttctcttataa 44398704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 3055689 - 3055576
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  3055689 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 3055590  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  3055589 aatttctcttataa 3055576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 37990012 - 37990125
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  37990012 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 37990111  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  37990112 aatttctcttataa 37990125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 41478638 - 41478751
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  41478638 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 41478737  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  41478738 aatttctcttataa 41478751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 13197710 - 13197822
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  13197710 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 13197809  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  13197810 atttctcttataa 13197822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 15896972 - 15896860
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||||    
T  15896972 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaa 15896873  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  15896872 atttctcttataa 15896860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 44397679 - 44397565
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    ||||||||| || ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| ||    
T  44397679 tatactccccccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacct 44397580  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  44397579 aaatttctcttataa 44397565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 9047754 - 9047867
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||||| |||| |||    
T  9047754 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgaccta 9047853  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  9047854 aatttctcttataa 9047867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 15372356 - 15372244
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||| ||||||||||||||||||||  ||| ||||||||||| ||||    
T  15372356 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaa 15372257  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  15372256 atttctcttataa 15372244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 13344616 - 13344502
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| | | ||||||| ||||||||||||||||||||||||||||||||  ||| | ||||||||| ||    
T  13344616 tatactccctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacct 13344517  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  13344516 aaatttctcttataa 13344502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 38917520 - 38917634
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| |||||| |||| ||    
T  38917520 tatactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacct 38917619  T
Q  155 aaatttctcttataa 169  Q
    |||||| ||||||||    
T  38917620 aaatttatcttataa 38917634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 6648518 - 6648631
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | || |||||| |||    
T  6648518 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgaccta 6648617  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  6648618 aatttctcttataa 6648631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 16243782 - 16243895
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||| ||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  16243782 atactccatccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 16243881  T
Q  156 aatttctcttataa 169  Q
    ||||| ||||||||    
T  16243882 aatttttcttataa 16243895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 37666609 - 37666722
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||| ||| |||||||||||||||||||||||||| |||||  ||| ||||||||||| |||    
T  37666609 atactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgaccta 37666708  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  37666709 aatttctcttataa 37666722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 12337937 - 12338049
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| | ||||||||| ||||    
T  12337937 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaa 12338036  T
Q  157 atttctcttataa 169  Q
    |||| ||||||||    
T  12338037 atttttcttataa 12338049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 169
Target Start/End: Original strand, 16044317 - 16044429
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||| ||| |||||||||||||||||||||||||| |||||  ||| ||||||||||| ||||    
T  16044317 tactccctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaa 16044416  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  16044417 atttctcttataa 16044429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 4683946 - 4684044
Alignment:
Q  71 ttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    |||| ||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  4683946 ttatatataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 4684044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 41492895 - 41493008
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| || ||| ||| ||||||| ||||||||||||||||||||||| ||||||||  ||| ||||||||||| |||    
T  41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgaccta 41492994  T
Q  156 aatttctcttataa 169  Q
    ||||||| ||||||    
T  41492995 aatttcttttataa 41493008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 30099180 - 30099294
Alignment:
Q  55 tatactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatct 154  Q
    |||||||||||| ||| ||||||| ||| |||||| ||| ||||||| |||||||||||| ||||||||||| |||||||  ||| | ||||||||| ||    
T  30099180 tatactccctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacct 30099279  T
Q  155 aaatttctcttataa 169  Q
    |||||||||||||||    
T  30099280 aaatttctcttataa 30099294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 44804581 - 44804680
Alignment:
Q  60 tccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatt 159  Q
    ||||||| ||| ||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||  ||| | || |||||| |||||||    
T  44804581 tccctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 165
Target Start/End: Original strand, 12170411 - 12170507
Alignment:
Q  69 tcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctctt 165  Q
    |||||||||||||| ||  || ||| ||||||| ||||||||| ||||||||||||||||||||||  ||| |||||| |||| |||| ||||||||    
T  12170411 tcttatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctctt 12170507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 16734910 - 16734802
Alignment:
Q  60 tccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatt 159  Q
    ||||||||||| ||||||||||| ||  ||  || ||||||| ||||||||| | ||||||||||||||||| ||  ||  ||||||||||| | || ||    
T  16734910 tccctccagtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactt 16734811  T
Q  160 tctcttata 168  Q
    |||||||||    
T  16734810 tctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 41453158 - 41453090
Alignment:
Q  88 ttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||| ||||| ||||||||| | ||||||||||||||||||||  ||| |||||| |||| ||||    
T  41453158 ttaggttagcaaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 10061624 - 10061657
Alignment:
Q  98 aaaaattgatgtatctagttaaaaattcagtcca 131  Q
    ||||||||||||||||||||||||||| ||||||    
T  10061624 aaaaattgatgtatctagttaaaaatttagtcca 10061657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 15372225 - 15372270
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaa 101  Q
    ||||||||||||||| ||||||||||| || ||||||| |||||||    
T  15372225 atactccctccagtcctatttataagagaaatttaggtcaacaaaa 15372270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 7700982 - 7700950
Alignment:
Q  92 gttaacaaaaattgatgtatctagttaaaaatt 124  Q
    |||||||||||||||||||| ||||||||||||    
T  7700982 gttaacaaaaattgatgtatttagttaaaaatt 7700950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 13952533 - 13952601
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaatt 124  Q
    |||||||||  |||||||||||||||| |  |||||||||||||||  |||| ||||| ||||| ||||    
T  13952533 atactccctggagtcttatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatt 13952601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 14093740 - 14093808
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaatt 124  Q
    |||||||||  |||||||||||||||| |  |||||||||||||||  |||| ||||| ||||| ||||    
T  14093740 atactccctggagtcttatttataagaaacatttaggttaacaaaatatgatttatcttgttaagaatt 14093808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 23916 - 23803
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  23916 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 23817  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  23816 aatttctcttataa 23803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 12991 - 12878
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| | ||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||    
T  12991 atactccctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccta 12892  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  12891 aatttctcttataa 12878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 6130 - 6243
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||| ||  ||| ||||||||||| |||    
T  6130 atactccctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgaccta 6229  T
Q  156 aatttctcttataa 169  Q
    ||||||||||||||    
T  6230 aatttctcttataa 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 49635 - 49523
Alignment:
Q  57 tactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaa 156  Q
    |||||||||| ||| ||||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||||||||||||  ||| ||||||||||| ||||    
T  49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 49536  T
Q  157 atttctcttataa 169  Q
    |||||||||||||    
T  49535 atttctcttataa 49523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 1450 - 1353
Alignment:
Q  72 tatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  1450 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataa 1353  T

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Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 231302 - 231416
Alignment:
Q  56 atactccctccagtcttatttataagataattttaggttaacaaaaattgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatcta 155  Q
    ||||||||||| ||| |||||||| || ||| |||||| ||||||| ||||| || |||||| ||||||||||||| ||  ||  ||||||||||||| |    
T  231302 atactccctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatcca 231401  T
Q  156 aatttctcttataat 170  Q
    | |||||||||||||    
T  231402 actttctcttataat 231416  T

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Target: scaffold0415 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 13773 - 13838
Alignment:
Q  103 ttgatgtatctagttaaaaattcagtccaaatgtatttacttttgttgatctaaatttctcttataa 169  Q
    ||||||||| |||||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||    
T  13773 ttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataa 13838  T

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