View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13940_high_1 (Length: 928)

Name: NF13940_high_1
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13940_high_1
NF13940_high_1
[»] chr6 (17 HSPs)
chr6 (21-917)||(34786264-34787166)
chr6 (687-763)||(13227127-13227199)
chr6 (32-82)||(34787239-34787289)
chr6 (675-732)||(6776603-6776660)
chr6 (675-732)||(33549127-33549184)
chr6 (675-732)||(12188299-12188356)
chr6 (675-732)||(12234503-12234560)
chr6 (675-767)||(6758387-6758475)
chr6 (675-730)||(21418493-21418548)
chr6 (675-729)||(30127423-30127477)
chr6 (675-731)||(12216767-12216823)
chr6 (675-731)||(32613137-32613193)
chr6 (675-730)||(24641188-24641243)
chr6 (675-718)||(31623001-31623044)
chr6 (675-732)||(3715475-3715532)
chr6 (675-728)||(10338174-10338227)
chr6 (675-732)||(32201881-32201938)
[»] chr2 (24 HSPs)
chr2 (621-674)||(6537429-6537482)
chr2 (22-107)||(24127982-24128068)
chr2 (675-731)||(26545863-26545919)
chr2 (22-97)||(40606877-40606953)
chr2 (683-732)||(25637182-25637231)
chr2 (184-232)||(24128153-24128201)
chr2 (675-731)||(42327392-42327448)
chr2 (584-619)||(24128521-24128556)
chr2 (675-730)||(39715015-39715070)
chr2 (675-725)||(37755974-37756024)
chr2 (675-732)||(42602577-42602634)
chr2 (676-732)||(4262298-4262354)
chr2 (675-727)||(28846714-28846766)
chr2 (676-728)||(42860372-42860424)
chr2 (675-730)||(19016054-19016109)
chr2 (675-730)||(21213792-21213847)
chr2 (359-414)||(24128285-24128340)
chr2 (675-730)||(29503294-29503349)
chr2 (675-730)||(37480098-37480153)
chr2 (675-732)||(42922437-42922495)
chr2 (675-732)||(7799031-7799088)
chr2 (675-728)||(12994376-12994429)
chr2 (675-732)||(16918574-16918631)
chr2 (681-730)||(40791488-40791537)
[»] scaffold1367 (1 HSPs)
scaffold1367 (675-732)||(836-893)
[»] scaffold0299 (1 HSPs)
scaffold0299 (675-732)||(11551-11608)
[»] chr4 (34 HSPs)
chr4 (675-740)||(13015450-13015515)
chr4 (679-730)||(39509097-39509148)
chr4 (679-732)||(2185028-2185081)
chr4 (675-732)||(7292794-7292851)
chr4 (675-732)||(37109347-37109404)
chr4 (675-728)||(38869791-38869844)
chr4 (680-732)||(8306513-8306565)
chr4 (676-732)||(23377980-23378036)
chr4 (684-732)||(40813314-40813362)
chr4 (677-732)||(2622391-2622446)
chr4 (675-767)||(7949419-7949507)
chr4 (675-730)||(30938217-30938272)
chr4 (675-730)||(55427198-55427253)
chr4 (675-729)||(41346962-41347016)
chr4 (675-732)||(21660140-21660197)
chr4 (675-732)||(21668904-21668961)
chr4 (675-728)||(51250522-51250575)
chr4 (678-730)||(32992638-32992690)
chr4 (675-730)||(19238575-19238630)
chr4 (677-732)||(37274455-37274510)
chr4 (676-731)||(43623441-43623496)
chr4 (675-730)||(47044740-47044795)
chr4 (686-732)||(7539624-7539670)
chr4 (675-725)||(9241028-9241078)
chr4 (675-733)||(24234668-24234726)
chr4 (682-732)||(28635726-28635776)
chr4 (675-728)||(8030204-8030257)
chr4 (675-732)||(9543194-9543251)
chr4 (675-732)||(12798707-12798764)
chr4 (675-724)||(17618304-17618353)
chr4 (676-733)||(20770935-20770992)
chr4 (675-728)||(31826632-31826685)
chr4 (675-732)||(49576890-49576947)
chr4 (675-732)||(53496900-53496957)
[»] scaffold0057 (1 HSPs)
scaffold0057 (22-95)||(39488-39562)
[»] chr1 (31 HSPs)
chr1 (673-731)||(15786317-15786375)
chr1 (682-730)||(12259290-12259338)
chr1 (675-732)||(8177178-8177235)
chr1 (675-732)||(9165191-9165248)
chr1 (675-732)||(33700769-33700826)
chr1 (675-732)||(51703802-51703859)
chr1 (676-732)||(12587294-12587350)
chr1 (677-733)||(50901607-50901663)
chr1 (673-732)||(8904435-8904494)
chr1 (675-730)||(17410254-17410309)
chr1 (675-729)||(40257422-40257476)
chr1 (675-732)||(2799885-2799942)
chr1 (675-732)||(6650618-6650675)
chr1 (675-732)||(17745252-17745309)
chr1 (676-732)||(18037609-18037665)
chr1 (675-731)||(31383795-31383851)
chr1 (681-732)||(12370192-12370243)
chr1 (675-730)||(19528325-19528380)
chr1 (675-730)||(24047100-24047155)
chr1 (675-729)||(9117142-9117196)
chr1 (686-732)||(17439951-17439997)
chr1 (675-725)||(21184391-21184441)
chr1 (675-705)||(44046171-44046201)
chr1 (675-705)||(52336797-52336827)
chr1 (694-731)||(7219915-7219952)
chr1 (675-732)||(10526846-10526903)
chr1 (675-732)||(16893417-16893474)
chr1 (675-732)||(21547476-21547533)
chr1 (675-732)||(27476767-27476824)
chr1 (675-732)||(36371493-36371550)
chr1 (675-732)||(51814517-51814574)
[»] scaffold0258 (1 HSPs)
scaffold0258 (675-732)||(15319-15376)
[»] chr8 (22 HSPs)
chr8 (675-732)||(968385-968442)
chr8 (675-731)||(11492070-11492126)
chr8 (675-730)||(16852363-16852418)
chr8 (22-102)||(19711886-19711968)
chr8 (676-732)||(34628666-34628722)
chr8 (675-726)||(5801070-5801121)
chr8 (675-737)||(30483875-30483937)
chr8 (675-732)||(3624603-3624660)
chr8 (675-732)||(7140732-7140789)
chr8 (679-732)||(27871695-27871748)
chr8 (675-728)||(29858049-29858102)
chr8 (675-732)||(35641897-35641954)
chr8 (675-732)||(35690060-35690117)
chr8 (673-732)||(3305184-3305243)
chr8 (676-731)||(6569768-6569823)
chr8 (705-740)||(9271557-9271592)
chr8 (675-730)||(19703485-19703540)
chr8 (675-730)||(28783083-28783138)
chr8 (676-730)||(36205219-36205273)
chr8 (675-732)||(6536543-6536600)
chr8 (675-732)||(18540321-18540378)
chr8 (675-732)||(23361645-23361702)
[»] chr5 (20 HSPs)
chr5 (675-732)||(29075804-29075861)
chr5 (679-730)||(84851-84902)
chr5 (676-730)||(41165627-41165681)
chr5 (675-732)||(16773830-16773887)
chr5 (675-732)||(21549133-21549190)
chr5 (675-732)||(22020858-22020915)
chr5 (675-730)||(30883196-30883251)
chr5 (675-732)||(14495801-14495858)
chr5 (675-732)||(29692382-29692439)
chr5 (675-732)||(43442219-43442276)
chr5 (675-731)||(1410657-1410712)
chr5 (677-732)||(14285186-14285241)
chr5 (677-732)||(36958118-36958173)
chr5 (675-732)||(8278271-8278328)
chr5 (683-732)||(12883871-12883920)
chr5 (675-728)||(21589311-21589364)
chr5 (675-732)||(25627080-25627137)
chr5 (675-728)||(30109308-30109361)
chr5 (675-732)||(34984829-34984886)
chr5 (675-732)||(37258362-37258419)
[»] chr3 (38 HSPs)
chr3 (675-732)||(4222164-4222221)
chr3 (675-732)||(51903874-51903931)
chr3 (677-732)||(10445135-10445190)
chr3 (675-732)||(2667885-2667942)
chr3 (675-732)||(4844507-4844564)
chr3 (675-732)||(4870203-4870260)
chr3 (675-732)||(29563923-29563980)
chr3 (22-95)||(33573620-33573693)
chr3 (675-732)||(36720404-36720461)
chr3 (679-732)||(44743851-44743904)
chr3 (675-731)||(30311329-30311385)
chr3 (675-730)||(14339633-14339688)
chr3 (675-734)||(21960574-21960633)
chr3 (677-732)||(31520601-31520656)
chr3 (673-732)||(40063640-40063699)
chr3 (675-730)||(47454615-47454670)
chr3 (672-726)||(9557340-9557394)
chr3 (22-95)||(33461266-33461340)
chr3 (675-732)||(10499105-10499162)
chr3 (679-732)||(30510195-30510248)
chr3 (691-732)||(36010781-36010822)
chr3 (675-732)||(46518651-46518708)
chr3 (675-732)||(47860779-47860835)
chr3 (676-732)||(27259185-27259241)
chr3 (676-732)||(28703400-28703456)
chr3 (676-711)||(31788987-31789022)
chr3 (22-97)||(32319339-32319417)
chr3 (678-732)||(31608520-31608574)
chr3 (682-732)||(39253727-39253777)
chr3 (685-731)||(52769980-52770026)
chr3 (675-728)||(8051237-8051290)
chr3 (676-729)||(11090164-11090217)
chr3 (675-732)||(15048057-15048114)
chr3 (676-729)||(26411569-26411622)
chr3 (675-716)||(28531070-28531111)
chr3 (675-732)||(32651434-32651491)
chr3 (683-732)||(37051290-37051339)
chr3 (683-732)||(47824146-47824195)
[»] chr7 (31 HSPs)
chr7 (676-723)||(26703149-26703196)
chr7 (682-732)||(3174957-3175007)
chr7 (675-732)||(2446331-2446388)
chr7 (675-732)||(26459406-26459463)
chr7 (680-732)||(9871282-9871334)
chr7 (677-733)||(17041007-17041063)
chr7 (676-732)||(23552142-23552198)
chr7 (675-727)||(48771961-48772013)
chr7 (675-730)||(20335829-20335884)
chr7 (675-732)||(7309378-7309436)
chr7 (675-732)||(43215207-43215264)
chr7 (675-732)||(45709704-45709761)
chr7 (675-727)||(25590634-25590686)
chr7 (675-718)||(21854571-21854614)
chr7 (675-730)||(22760886-22760941)
chr7 (675-718)||(25021345-25021388)
chr7 (676-731)||(30217903-30217958)
chr7 (673-732)||(33869441-33869500)
chr7 (675-730)||(37085547-37085602)
chr7 (675-730)||(43590930-43590985)
chr7 (670-732)||(5668567-5668629)
chr7 (678-728)||(5934147-5934197)
chr7 (685-727)||(21410711-21410753)
chr7 (678-740)||(22035424-22035486)
chr7 (675-729)||(29785300-29785354)
chr7 (682-732)||(37162346-37162396)
chr7 (675-737)||(39631867-39631929)
chr7 (675-732)||(7721392-7721449)
chr7 (675-732)||(9608625-9608682)
chr7 (675-732)||(9836197-9836254)
chr7 (675-732)||(17113818-17113875)
[»] scaffold0009 (1 HSPs)
scaffold0009 (675-729)||(19846-19900)
[»] scaffold0194 (1 HSPs)
scaffold0194 (675-732)||(13042-13099)
[»] scaffold0021 (1 HSPs)
scaffold0021 (675-732)||(106071-106128)
[»] scaffold0417 (1 HSPs)
scaffold0417 (676-733)||(10243-10300)
[»] scaffold0291 (1 HSPs)
scaffold0291 (675-730)||(2468-2523)
[»] scaffold0180 (1 HSPs)
scaffold0180 (675-732)||(19958-20015)
[»] scaffold0126 (1 HSPs)
scaffold0126 (675-732)||(25343-25400)
[»] scaffold0118 (1 HSPs)
scaffold0118 (675-732)||(41629-41686)
[»] scaffold0008 (1 HSPs)
scaffold0008 (675-732)||(49329-49386)


Alignment Details
Target: chr6 (Bit Score: 697; Significance: 0; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 697; E-Value: 0
Query Start/End: Original strand, 21 - 917
Target Start/End: Complemental strand, 34787166 - 34786264
Alignment:
Q  21 tccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcaccccaccttttatggagnnnnnnnnn-ca 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  34787166 tccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcaccccaccttttatggagaaaaaaaaaaca 34787067  T
Q  120 agtggcattcacccctctttctggnnnnnnnncaattcgcacttcagctttcaacaaattctcggtgttctcttaatagtttttgtgttatttctcttaa 219  Q
    ||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34787066 agtggcattcacccctctttctggaaaaaaaacaattcgcacttcagctttcaacaaattctcggtgttctcttaatagtttttgtgttatttctcttaa 34786967  T
Q  220 tattttcacgtgtttgtgttttaattgtttactcaagtcattgattgaggtt-------ggttaggttttcttggttagtgggttaccagaatccttaat 312  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  34786966 tattttcacgtgtttgtgttttaattgtttactcaaatcattgattgaggtttgaggttggttaggttttcttggttagtgggttaccagaatccttaat 34786867  T
Q  313 tgaatccttgattgaatcatgttatggaatcttgttcccggaatccttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccgg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786866 tgaatccttgattgaatcatgttatggaatcttgttcccggaatccttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccgg 34786767  T
Q  413 ttttcttctgagaaacgttttatagtgaagtattctggttcaannnnnnnnnnnnnnnnnnaaagttccaaaacacttaaaatctcataaacaactaaag 512  Q
    |||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||||||||    
T  34786766 ttttcttctgagaaacgttttatagtgaagtattctggttcaattttttatttttttt---aaagttccaaaacacttaaaatctcataaacaactaaag 34786670  T
Q  513 tgatctagnnnnnnnggatggatttaaagtaaatttcttttatgggacaaatctgttttcagtgtcttctatgaggaattagatggatattgcgattcat 612  Q
    ||||||||       ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34786669 tgatctagtttttttggatggatttaaagtaaatttcttttatgggacaaatctgttttcggtgtcttctatgaggaattagatggatattgcgattcat 34786570  T
Q  613 gacacttatcttctgcaaaatttgttatagtttgatgtaatacaataactttatgatatatagtattggcttgggatctgggagtgtgctccttctcgaa 712  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786569 gacacttatcttctgcaaaatttgttatagtttgatgtaatacaataactttatgatatatagtattggcttgggatctgggagtgtgctccttctcgaa 34786470  T
Q  713 gtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctttggtggctccgctggtattggtttgtagtgtcctgca-nnnnnnn 811  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  34786469 gtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctttggtggctccgctggtattggtttgtagtgtcctgcattttttct 34786370  T
Q  812 nacttcagttacttttttggtgtgtggttggagctgtcgtgttggttcaacctgtggtttgattccagtcggcagtggtggttttgtgtgtccggttctg 911  Q
     |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34786369 tacttcagttactttttaggtgtgtggttggagctgtcgtgttggttcaacctgtggtttgattccagtcggcagtggtggttttgtgtgtccggttctg 34786270  T
Q  912 tgctgc 917  Q
    ||||||    
T  34786269 tgctgc 34786264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 687 - 763
Target Start/End: Complemental strand, 13227199 - 13227127
Alignment:
Q  687 gatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaattta 763  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |    |||||||||||||||||||||||    
T  13227199 gatctgggagtgtgctcctcctcgaagtctcaagttcgattctctcatat----gtcagtttaggtgggccaattta 13227127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 34787289 - 34787239
Alignment:
Q  32 acacaaactactgtatttaccttttatataaaacaaaacacaattcccttt 82  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  34787289 acacaaactactaaatttaccttttatataaaacaaaacacaattcccttt 34787239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 6776660 - 6776603
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||| |||||||||| ||||| |||||||||| |||||||||    
T  6776660 gtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctctc 6776603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 33549127 - 33549184
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  33549127 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 12188356 - 12188299
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||| | || |||||||||||||||||    
T  12188356 gtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctc 12188299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 12234560 - 12234503
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| ||||||| ||||||||||||||| |||||| |||||| |||||||||||||    
T  12234560 gtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 767
Target Start/End: Complemental strand, 6758475 - 6758387
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctt 767  Q
    |||||||||| |||| ||||||||||||||  ||||| |||||||| |||||||||||  ||    |||| ||||||||||| ||||||||||    
T  6758475 gtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggt----gtcaatttaggtgggcaaatttagctt 6758387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 21418493 - 21418548
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||    
T  21418493 gtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctc 21418548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 729
Target Start/End: Original strand, 30127423 - 30127477
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    ||||||||||||| |||||||||||||||||  |||| |||||| ||||||||||    
T  30127423 gtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattct 30127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 731
Target Start/End: Original strand, 12216767 - 12216823
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||||| |||||| ||| || ||||||||||||||| |||||| ||||||||||||    
T  12216767 gtattggtttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 731
Target Start/End: Complemental strand, 32613193 - 32613137
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||| |||||| ||||||||||||||||||||| |  ||||| ||||||||||||    
T  32613193 gtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctct 32613137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 24641243 - 24641188
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||| |||||||||||||||||||||||| ||||| || | | |||||||||||    
T  24641243 gtattgacttgggatctgggagtgtgctcctcctcgaggtttaaggttcgattctc 24641188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 718
Target Start/End: Complemental strand, 31623044 - 31623001
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 718  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||    
T  31623044 gtattggcttgggacctgggagtgtgctcctcctcgaggtctca 31623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 3715475 - 3715532
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||| ||||||||||| |||| ||  |||| ||||||||||||||||||||    
T  3715475 gtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctc 3715532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 10338227 - 10338174
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||    
T  10338227 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 32201938 - 32201881
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||  |||||||||||| ||  |||| |||||||||||| ||||    
T  32201938 gtattggcttgggatctcagagtgtgctcctcctttaagtttcaagttcgattatctc 32201881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 674
Target Start/End: Complemental strand, 6537482 - 6537429
Alignment:
Q  621 tcttctgcaaaatttgttatagtttgatgtaatacaataactttatgatatata 674  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6537482 tcttctgcaaaatgtgttatagtttgatgtaatacaataactttatgatatata 6537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 24127982 - 24128068
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcac-cccaccttttatgga 107  Q
    ||||||||| ||||||||| |   ||||| |||||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  24127982 ccaacattttacacaaacttccaaatttatcttttatataaaacaaaacacaatcccctttcacttttcactccaaccttttatgga 24128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 675 - 731
Target Start/End: Original strand, 26545863 - 26545919
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  26545863 gtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctct 26545919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 40606953 - 40606877
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccctttcacttttcaccccac 97  Q
    |||||||||||||||||||||   ||||||| |||||||||||||| |||||||  ||||||| |||||||||||||    
T  40606953 ccaacatttgacacaaactaccaaatttaccctttatataaaacaatacacaatcaccctttcccttttcaccccac 40606877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 683 - 732
Target Start/End: Original strand, 25637182 - 25637231
Alignment:
Q  683 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  25637182 ttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctc 25637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 24128153 - 24128201
Alignment:
Q  184 gtgttctcttaatagtttttgtgttatttctcttaatattttcacgtgt 232  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  24128153 gtgttctcttaatcgtttttgtgttattcctcttaatattttcatgtgt 24128201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 731
Target Start/End: Complemental strand, 42327448 - 42327392
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| ||||||||||||    
T  42327448 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctct 42327392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 584 - 619
Target Start/End: Original strand, 24128521 - 24128556
Alignment:
Q  584 tgaggaattagatggatattgcgattcatgacactt 619  Q
    ||||||||||||||||||||||||||||||||||||    
T  24128521 tgaggaattagatggatattgcgattcatgacactt 24128556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 39715015 - 39715070
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  39715015 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 725
Target Start/End: Complemental strand, 37756024 - 37755974
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 725  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||||||    
T  37756024 gtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcga 37755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 42602577 - 42602634
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||||||| | |||| | ||| |||||||||    
T  42602577 gtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctc 42602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 732
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||| |||| ||||||||||| ||| | |||||| |||||||||||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 727
Target Start/End: Original strand, 28846714 - 28846766
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 727  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| ||||||||    
T  28846714 gtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 728
Target Start/End: Original strand, 42860372 - 42860424
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    ||||| |||| || |||||||||||||||| ||||| ||||||||||||||||    
T  42860372 tattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 19016054 - 19016109
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||| ||  ||||||||||||||| ||||| |||||||||| |||||||    
T  19016054 gtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctc 19016109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 21213792 - 21213847
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| ||||||||||| |||| || || |||||| |||||||||||    
T  21213792 gtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctc 21213847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 24128285 - 24128340
Alignment:
Q  359 ttttcaacaaagactttaggttgttatccgaaaaactcgtgcaacgccttccggtt 414  Q
    |||||| ||||| |||  |||||||||||| ||||||||||||| |||||||||||    
T  24128285 ttttcaccaaagccttccggttgttatccggaaaactcgtgcaatgccttccggtt 24128340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 29503294 - 29503349
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||| |||||| |||||||||||||||| ||| | |||||| |||||||||||    
T  29503294 gtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 29503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 37480098 - 37480153
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||    
T  37480098 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 37480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 42922437 - 42922495
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaa-gtctcaagttcgattctctc 732  Q
    |||||||||||| | |||||||||||||||| ||| || |||||| |||||||||||||    
T  42922437 gtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctc 42922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 7799088 - 7799031
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||  ||||||||||||||| |||||  |||||  ||||||||||||    
T  7799088 gtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 12994429 - 12994376
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||| ||||||| |||||||||||||||| ||  | ||||||||||||||||    
T  12994429 gtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc 12994376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 16918631 - 16918574
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| ||||||||||||||||||||||| ||| | |||| | ||| |||||||||    
T  16918631 gtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctc 16918574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 40791537 - 40791488
Alignment:
Q  681 gcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||| ||| || |||||||||||||||| | ||||||||||||||||||    
T  40791537 gcttgagatttgagagtgtgctccttctcaaggtctcaagttcgattctc 40791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 893 - 836
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  893 gtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 11551 - 11608
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  11551 gtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 11608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 9e-17; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 675 - 740
Target Start/End: Original strand, 13015450 - 13015515
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtca 740  Q
    ||||||||||||||  ||||||||||||||| |||||||||||| |||||||||||||| ||||||    
T  13015450 gtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtca 13015515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 39509097 - 39509148
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||||||    
T  39509097 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 679 - 732
Target Start/End: Complemental strand, 2185081 - 2185028
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||| | |||||||||||||||||||| |||||||| |||||||||||||    
T  2185081 tggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctc 2185028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 7292851 - 7292794
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| | |||||||||||||||| ||| |||||||| |||||||||||||    
T  7292851 gtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctc 7292794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 37109404 - 37109347
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  37109404 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 37109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 728
Target Start/End: Original strand, 38869791 - 38869844
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||||||||    
T  38869791 gtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 38869844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 680 - 732
Target Start/End: Original strand, 8306513 - 8306565
Alignment:
Q  680 ggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| || |||||||||||||||| |||||||||| |||||||||||||||    
T  8306513 ggcttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctc 8306565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 732
Target Start/End: Original strand, 23377980 - 23378036
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  23377980 tattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 23378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 732
Target Start/End: Complemental strand, 40813362 - 40813314
Alignment:
Q  684 tgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  40813362 tgggatctgggagtgtgctccttttcgaagtctcaggttcgatactctc 40813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 677 - 732
Target Start/End: Complemental strand, 2622446 - 2622391
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  2622446 attggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctc 2622391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 767
Target Start/End: Complemental strand, 7949507 - 7949419
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtcagtcagtttaggtgggccaatttagctt 767  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||||||  ||    |||| ||||||||||| ||||||||||    
T  7949507 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggt----gtcaatttaggtgggctaatttagctt 7949419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 30938272 - 30938217
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||| ||||||||| ||||||||||||| ||||| |||||| |||||||||||    
T  30938272 gtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 55427253 - 55427198
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||| |||||||||||    
T  55427253 gtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctc 55427198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 729
Target Start/End: Complemental strand, 41347016 - 41346962
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    ||||||| ||| ||||||||||| ||||||| |||||||||||| ||||||||||    
T  41347016 gtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttcgattct 41346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 21660197 - 21660140
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  21660197 gtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctc 21660140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 21668961 - 21668904
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||| ||||||||||||||||| | ||||| ||||||||||||||| ||||    
T  21668961 gtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctc 21668904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 51250575 - 51250522
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    ||||||||||||||||||||||||||||||  ||| |  |||||||||||||||    
T  51250575 gtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattc 51250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 678 - 730
Target Start/End: Original strand, 32992638 - 32992690
Alignment:
Q  678 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||| || ||||||||||||| ||| | ||||||||||||||||||    
T  32992638 ttggcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctc 32992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 19238630 - 19238575
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||  |||||||||||    
T  19238630 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctc 19238575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 732
Target Start/End: Complemental strand, 37274510 - 37274455
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |||||||||||||||| ||| | |||| | |||||||||||||    
T  37274510 attggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 37274455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 731
Target Start/End: Complemental strand, 43623496 - 43623441
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||| |||| |||| |||||||||||||| || ||||||||| ||||||||||||    
T  43623496 tattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgattctct 43623441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 47044740 - 47044795
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||| ||||||||||| |||| ||||||| ||||| |||||| |||||||||||    
T  47044740 gtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 686 - 732
Target Start/End: Original strand, 7539624 - 7539670
Alignment:
Q  686 ggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| ||||||||||| | |||||| |||||||||||||    
T  7539624 ggatctgggagtatgctccttctcaaggtctcaggttcgattctctc 7539670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 725
Target Start/End: Complemental strand, 9241078 - 9241028
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 725  Q
    ||||||||||||||||||| ||||||||||| ||||| |||| | ||||||    
T  9241078 gtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 733
Target Start/End: Original strand, 24234668 - 24234726
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 733  Q
    ||||||||||||||  ||||||||||||| | ||  | |||||||||||||||||||||    
T  24234668 gtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctca 24234726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 682 - 732
Target Start/End: Original strand, 28635726 - 28635776
Alignment:
Q  682 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||||||| || || |||| | |||||||||||||    
T  28635726 cttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctc 28635776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 8030257 - 8030204
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||| |||||||||  ||||||||||||||| ||| | ||||||||||||||||    
T  8030257 gtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattc 8030204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 9543194 - 9543251
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||| ||||||  |||||||| |||||| ||||||||| ||||||||||||    
T  9543194 gtatcggcttgagatctgatagtgtgcttcttctcaaagtctcaaattcgattctctc 9543251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 12798707 - 12798764
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| ||| |||||||||||||||| || ||||| || ||| |||||||||||||    
T  12798707 gtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctctc 12798764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 724
Target Start/End: Original strand, 17618304 - 17618353
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcg 724  Q
    ||||||||||| || |||||||||||||||| ||||| |||||| |||||    
T  17618304 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcg 17618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 733
Target Start/End: Original strand, 20770935 - 20770992
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 733  Q
    ||||||||||  ||||||  ||||| |||||||| | |||||||||||||||||||||    
T  20770935 tattggcttgaaatctggatgtgtgttccttctcaaggtctcaagttcgattctctca 20770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Original strand, 31826632 - 31826685
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||| |||||||||| || |||||||||||| ||| | ||||||||||||||||    
T  31826632 gtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattc 31826685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 49576947 - 49576890
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| |||  ||||||||||||||| ||| | |||||| |||||||||||||    
T  49576947 gtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 53496900 - 53496957
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| |||||| |||||||||||||||| ||| ||||||||  || |||||||||    
T  53496900 gtattggtttgggacctgggagtgtgctcctcctcaaagtctcagatttgattctctc 53496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 39562 - 39488
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt-ccctttcacttttcacccc 95  Q
    |||||||||||||||||||||   ||||| | ||||||||||||||||||||||| || ||||||||||||||||    
T  39562 ccaacatttgacacaaactaccaaatttatcctttatataaaacaaaacacaattaccttttcacttttcacccc 39488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 673 - 731
Target Start/End: Complemental strand, 15786375 - 15786317
Alignment:
Q  673 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  15786375 tagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 682 - 730
Target Start/End: Original strand, 12259290 - 12259338
Alignment:
Q  682 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  12259290 cttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctc 12259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 8177235 - 8177178
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| ||| | || ||| |||||||||||||    
T  8177235 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctc 8177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 9165248 - 9165191
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||| |||||||| |||| ||||||||    
T  9165248 gtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctc 9165191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 33700826 - 33700769
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |||||||||||||||||| ||| | |||||| |||||||||||||    
T  33700826 gtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 33700769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 51703802 - 51703859
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |||||||||||||||||| ||| |||| ||| |||||||||||||    
T  51703802 gtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctc 51703859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 732
Target Start/End: Original strand, 12587294 - 12587350
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||| |||||||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctc 12587350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 677 - 733
Target Start/End: Original strand, 50901607 - 50901663
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 733  Q
    |||||||||||| |||| ||||||||||| ||||| ||||||| |||||||||||||    
T  50901607 attggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctca 50901663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 673 - 732
Target Start/End: Original strand, 8904435 - 8904494
Alignment:
Q  673 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||| |||||||| || |||||||||||| ||| | ||||||||||||||||||||    
T  8904435 tagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctc 8904494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 17410254 - 17410309
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||| |||||||||||||||||| |||| |||||  |||||||||||||||||    
T  17410254 gtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 729
Target Start/End: Original strand, 40257422 - 40257476
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    ||||||||||| || |||||||||||||||| ||||| ||||||||||| |||||    
T  40257422 gtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattct 40257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 2799885 - 2799942
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  2799885 gtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 2799942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 6650618 - 6650675
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||| |||||| ||||||| ||| | |||||| |||||||||||||    
T  6650618 gtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctc 6650675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 17745309 - 17745252
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| ||| | |||||||||| ||||| |||||| |||||||||||||    
T  17745309 gtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctc 17745252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 732
Target Start/End: Complemental strand, 18037665 - 18037609
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| ||||||  |||||||||||||||| ||||  |||||||||||||||||||    
T  18037665 tattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctc 18037609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 731
Target Start/End: Complemental strand, 31383851 - 31383795
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||||||||||| |||||||||||||||| || |  |||||| ||||||||||||    
T  31383851 gtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctct 31383795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 681 - 732
Target Start/End: Original strand, 12370192 - 12370243
Alignment:
Q  681 gcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||| |||||||||||||||| ||||| |||||| ||| |||||||||    
T  12370192 gcttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 12370243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 19528380 - 19528325
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||||||  |||||||||||| ||| | |||||| |||||||||||    
T  19528380 gtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 24047155 - 24047100
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||| ||  ||||||||||||||| ||||| || |||||||||||||||    
T  24047155 gtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 729
Target Start/End: Original strand, 9117142 - 9117196
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    |||| |||||||||||||| ||||||||||| || || |||||| ||||||||||    
T  9117142 gtatgggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 686 - 732
Target Start/End: Original strand, 17439951 - 17439997
Alignment:
Q  686 ggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||| ||||| |||||| ||| |||||||||    
T  17439951 ggatctgggagtgtgctcctcctcgaggtctcatgtttgattctctc 17439997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 725
Target Start/End: Complemental strand, 21184441 - 21184391
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcga 725  Q
    |||||||||||||| ||| |||||||||||||||  | |||||||||||||    
T  21184441 gtattggcttgggacctgcgagtgtgctccttctgaaggtctcaagttcga 21184391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 705
Target Start/End: Complemental strand, 44046201 - 44046171
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctcct 705  Q
    |||||||||||||||||||||||||||||||    
T  44046201 gtattggcttgggatctgggagtgtgctcct 44046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 705
Target Start/End: Complemental strand, 52336827 - 52336797
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctcct 705  Q
    |||||||||||||||||||||||||||||||    
T  52336827 gtattggcttgggatctgggagtgtgctcct 52336797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 694 - 731
Target Start/End: Complemental strand, 7219952 - 7219915
Alignment:
Q  694 gagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctct 7219915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 10526846 - 10526903
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||| ||||||| ||| | ||||||  ||||||||||||    
T  10526846 gtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctc 10526903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 16893417 - 16893474
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||| ||| ||||||||| ||||| ||||| |||||| |||||||| ||||    
T  16893417 gtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctc 16893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 21547533 - 21547476
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||  |||||| |||||||| ||||| || ||| |||||||||||||    
T  21547533 gtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctc 21547476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 27476824 - 27476767
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||  | ||||||||||||| |||||  ||||||||| |||||||||    
T  27476824 gtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctc 27476767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 36371493 - 36371550
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| | |||||||||||||||| ||| | |||| | |||||||||||||    
T  36371493 gtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctc 36371550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 51814517 - 51814574
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||| |||||| |||||||||||| ||| | |||||| |||||||||||||    
T  51814517 gtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 15376 - 15319
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  15376 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 968385 - 968442
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  968385 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 675 - 731
Target Start/End: Complemental strand, 11492126 - 11492070
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||||||||| ||||||||||||||||||||||||| |||| | ||||||||||||    
T  11492126 gtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctct 11492070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 16852363 - 16852418
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||    
T  16852363 gtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 19711968 - 19711886
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaat-tccctttcacttttcacc-ccacctttt 102  Q
    ||||||||||||| |||||||   ||||||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||||    
T  19711968 ccaacatttgacataaactaccaaatttaccctttatataaaacaaaccacaatcaccctttcacttttcaccgccacctttt 19711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 732
Target Start/End: Original strand, 34628666 - 34628722
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||| | || ||| |||||||| |||||||||||||    
T  34628666 tattggcttgggatctgggagtgtgtttctcctcaaagtctcaggttcgattctctc 34628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 726
Target Start/End: Original strand, 5801070 - 5801121
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgat 726  Q
    ||||| ||||||||||| |||||||||||| |||||| ||||||||||||||    
T  5801070 gtattagcttgggatctaggagtgtgctccgtctcgacgtctcaagttcgat 5801121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 737
Target Start/End: Complemental strand, 30483937 - 30483875
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtg 737  Q
    ||||||||||||||| ||||||||||||||| |||  ||||||| |||| |||||||| ||||    
T  30483937 gtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtg 30483875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 3624603 - 3624660
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| ||||||||||||||||  || | |||||| |||||||||||||    
T  3624603 gtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 7140732 - 7140789
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||| |||||||||| |||||  |||||  ||||||||||||    
T  7140732 gtattggcttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctctc 7140789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 732
Target Start/End: Original strand, 27871695 - 27871748
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||    
T  27871695 tggcttgggatcttggagtttgttcctcctcaaagtctcaagttcgattctctc 27871748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 29858102 - 29858049
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||||||||||| | |||||||||||||| ||||| |||||| |||||||||    
T  29858102 gtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattc 29858049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 35641954 - 35641897
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||| ||| ||||||||||||||| ||||| |||||| |||||||||||||    
T  35641954 gtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctc 35641897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 35690117 - 35690060
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||| || ||||||| ||| | |||||| |||||||||||||    
T  35690117 gtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctc 35690060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 732
Target Start/End: Complemental strand, 3305243 - 3305184
Alignment:
Q  673 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||| |||||||||||||| |||||||| ||| | ||||||| ||||||| ||||    
T  3305243 tagtattggtttgggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctc 3305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 731
Target Start/End: Complemental strand, 6569823 - 6569768
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||||||||||||||||||||||||||| ||  | || ||| ||||||||||||    
T  6569823 tattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctct 6569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 740
Target Start/End: Complemental strand, 9271592 - 9271557
Alignment:
Q  705 ttctcgaagtctcaagttcgattctctcatgtgtca 740  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9271592 ttctcaaagtctcaagttcgattctctcatgtgtca 9271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 19703540 - 19703485
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| ||| |||||||||||| ||| | |||||| |||||||||||    
T  19703540 gtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 28783083 - 28783138
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||| || |||||||||||||||| ||| | |||||| |||||||||||    
T  28783083 gtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctc 28783138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 676 - 730
Target Start/End: Original strand, 36205219 - 36205273
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||| ||| ||||||||||||||||||| ||| | |||||| |||||||||||    
T  36205219 tattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 6536543 - 6536600
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||| ||||||||    
T  6536543 gtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctc 6536600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 18540321 - 18540378
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||| || || ||| | |||||| |||||||||||||    
T  18540321 gtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctc 18540378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 23361702 - 23361645
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||| |||| ||||||||    
T  23361702 gtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctc 23361645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 29075804 - 29075861
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||||    
T  29075804 gtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctc 29075861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 84851 - 84902
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  84851 tggcttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctc 84902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 676 - 730
Target Start/End: Complemental strand, 41165681 - 41165627
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||| |||||||||||||||||||||||||||||||||||| |  ||||||||||    
T  41165681 tattagcttgggatctgggagtgtgctccttctcgaagtcttagattcgattctc 41165627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 16773830 - 16773887
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  16773830 gtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 16773887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 21549190 - 21549133
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||  ||||||||||||||||| ||||    
T  21549190 gtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctc 21549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 22020915 - 22020858
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||    
T  22020915 gtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctc 22020858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 30883251 - 30883196
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||||||||||| |||||||||||||||| ||| | ||||||||||| ||||||    
T  30883251 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctc 30883196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 14495858 - 14495801
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||  || |||||||||    
T  14495858 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 14495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 29692439 - 29692382
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||| |||  ||||||||    
T  29692439 gtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctc 29692382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 43442219 - 43442276
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| ||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  43442219 gtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 43442276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 731
Target Start/End: Complemental strand, 1410712 - 1410657
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||||| |||||||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  1410712 gtattgacttgggatatgggagtgtgctcctcctcgaggtctc-agttcgattctct 1410657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 732
Target Start/End: Original strand, 14285186 - 14285241
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| | |||||||||||||||| ||| | |||||| |||||||||||||    
T  14285186 attggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 14285241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 677 - 732
Target Start/End: Complemental strand, 36958173 - 36958118
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||| ||| |||||||||| ||||  ||||||||||| |||||||||||||    
T  36958173 attggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgattctctc 36958118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 8278328 - 8278271
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||  ||||||||||||||| |||||  ||||||||| |||| ||||    
T  8278328 gtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctc 8278271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 732
Target Start/End: Original strand, 12883871 - 12883920
Alignment:
Q  683 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||| || || |||||| |||| ||||||||    
T  12883871 ttgggatctgggagtgtgctcctccttgaggtctcatgttcaattctctc 12883920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Original strand, 21589311 - 21589364
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||||||||||| |||||||| |||| || ||||| |||||| |||||||||    
T  21589311 gtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattc 21589364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 25627080 - 25627137
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |  ||||||||||||||| ||| | |||||| |||||||||||||    
T  25627080 gtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 25627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Complemental strand, 30109361 - 30109308
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    ||||||||||| || |||||||||||||||| || || |||||| |||||||||    
T  30109361 gtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 34984829 - 34984886
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| | |||||||||||||||| ||| | |||| | |||||||||||||    
T  34984829 gtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctc 34984886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 37258419 - 37258362
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| ||||||||||| ||||||||||||| ||| | || ||| |||||||||||||    
T  37258419 gtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctc 37258362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 4222164 - 4222221
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| ||| |||||| | |||||||||||||    
T  4222164 gtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctc 4222221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 51903931 - 51903874
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||    
T  51903931 gtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctc 51903874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 677 - 732
Target Start/End: Complemental strand, 10445190 - 10445135
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  10445190 attggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 10445135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 2667885 - 2667942
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||| | ||||| |||||| |||||||| ||||    
T  2667885 gtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctc 2667942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 4844564 - 4844507
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| | |||||||||||    
T  4844564 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4844507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 4870260 - 4870203
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| | |||||||||||    
T  4870260 gtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctc 4870203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 29563923 - 29563980
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||| ||||||| |||||||| || |||||||||||| |||||||||||||    
T  29563923 gtattggcttgagatctggaagtgtgcttctcctcgaagtctcaggttcgattctctc 29563980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 33573620 - 33573693
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaattccctttcacttttcacccc 95  Q
    ||||||||| |||||||||||   | ||||| |||||||||||||||||| |||| || |||||||||||||||    
T  33573620 ccaacatttaacacaaactacaaaaattaccctttatataaaacaaaacaaaattacccttcacttttcacccc 33573693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 36720404 - 36720461
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||| ||||||||||||||| ||||| || ||| |||||||||||||    
T  36720404 gtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 679 - 732
Target Start/End: Complemental strand, 44743904 - 44743851
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||| ||||| |||||| |||||||| ||||    
T  44743904 tggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctc 44743851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 731
Target Start/End: Original strand, 30311329 - 30311385
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    |||| |||||||||||||||||||||||||| ||| | |||||| ||||||||||||    
T  30311329 gtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 30311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 14339633 - 14339688
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||| |||||||||||    
T  14339633 gtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctc 14339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 734
Target Start/End: Original strand, 21960574 - 21960633
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcat 734  Q
    |||||||||||||| ||| |||||||||||| ||||| ||||||  ||||||||||||||    
T  21960574 gtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctcat 21960633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 677 - 732
Target Start/End: Complemental strand, 31520656 - 31520601
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||| ||||| |||| | ||| |||||||||    
T  31520656 attggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctc 31520601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 673 - 732
Target Start/End: Original strand, 40063640 - 40063699
Alignment:
Q  673 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||||| |||| ||||||| ||  | ||||||||||||||||||||    
T  40063640 tagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctc 40063699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 47454670 - 47454615
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||| ||||| ||||||||||||| ||||| |||||| |||||||||||    
T  47454670 gtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 726
Target Start/End: Original strand, 9557340 - 9557394
Alignment:
Q  672 atagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgat 726  Q
    ||||||||||||||||||||| |||||||||||| |||||  ||||| |||||||    
T  9557340 atagtattggcttgggatctgagagtgtgctcctcctcgagatctcaggttcgat 9557394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 33461266 - 33461340
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt-ccctttcacttttcacccc 95  Q
    ||||||||||||||||||||    ||||||| | |||||||||||||||| ||||  ||||||||||||||||||    
T  33461266 ccaacatttgacacaaactatccaatttaccctctatataaaacaaaacaaaattaacctttcacttttcacccc 33461340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 10499162 - 10499105
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||| ||||| | || || |||||| |||||||||||||    
T  10499162 gtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctc 10499105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 732
Target Start/End: Complemental strand, 30510248 - 30510195
Alignment:
Q  679 tggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| || ||||| ||||||||||||| |||||| |||||||||||||    
T  30510248 tggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctc 30510195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 691 - 732
Target Start/End: Original strand, 36010781 - 36010822
Alignment:
Q  691 tgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  36010781 tgggagtgtgctcctcctcaaagtctcaagttcgattctctc 36010822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 46518651 - 46518708
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||||||||| ||| | || ||| ||| |||||||||    
T  46518651 gtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctc 46518708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 47860779 - 47860835
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| |||||| ||||||||||||| ||| ||||||| ||||||||||||||    
T  47860779 gtattggctttggatctaggagtgtgctcctcctcaaagtctc-agttcgattctctc 47860835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 732
Target Start/End: Original strand, 27259185 - 27259241
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||| |||||||||||||||| ||||| || ||| ||| |||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctc 27259241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 676 - 732
Target Start/End: Complemental strand, 28703456 - 28703400
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||||||||||||||||||||||  || | |||||| |||||||||||||    
T  28703456 tattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 28703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 711
Target Start/End: Complemental strand, 31789022 - 31788987
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcga 711  Q
    |||||||||||||||||||||||||||||| |||||    
T  31789022 tattggcttgggatctgggagtgtgctcctcctcga 31788987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 32319339 - 32319417
Alignment:
Q  22 ccaacatttgacacaaactactgtatttaccttttatataaaacaaaacacaatt--ccctttcactt-ttcaccccac 97  Q
    ||||||||| |||||||||||   ||||| | ||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  32319339 ccaacattttacacaaactaccaaatttatcctttatataaaataaaacacaattcaccctttcacttgttcaccccac 32319417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 678 - 732
Target Start/End: Complemental strand, 31608574 - 31608520
Alignment:
Q  678 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||| ||||||||||||||||||| ||||| ||||||  || |||||||||    
T  31608574 ttggcttgagatctgggagtgtgctcctcctcgaggtctcagatttgattctctc 31608520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 682 - 732
Target Start/End: Original strand, 39253727 - 39253777
Alignment:
Q  682 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||||  || | |||||| |||||||||||||    
T  39253727 cttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 39253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 731
Target Start/End: Complemental strand, 52770026 - 52769980
Alignment:
Q  685 gggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||||||||||||||||||| || || |||||| ||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctct 52769980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 728
Target Start/End: Original strand, 8051237 - 8051290
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||||||||||| |||| ||| |||| || ||||| ||||||||||||||||    
T  8051237 gtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattc 8051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 729
Target Start/End: Complemental strand, 11090217 - 11090164
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |  |||||||||    
T  11090217 tattggcttgggatctgggaatgtgctcctcctcgaggtcttagtttcgattct 11090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 15048114 - 15048057
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||||||||||||| ||||||||| ||| | |||||| |||||||| ||||    
T  15048114 gtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctc 15048057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 676 - 729
Target Start/End: Original strand, 26411569 - 26411622
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    ||||| ||||||| ||| |||||||||||||||| | || ||||||||||||||    
T  26411569 tattgacttgggacctgagagtgtgctccttctcaatgtttcaagttcgattct 26411622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 716
Target Start/End: Complemental strand, 28531111 - 28531070
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtct 716  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||    
T  28531111 gtattggcttgggatctgggagtatgctcctcctcgaggtct 28531070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 32651491 - 32651434
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||| |  |||||  ||||||||||||    
T  32651491 gtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctc 32651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 732
Target Start/End: Complemental strand, 37051339 - 37051290
Alignment:
Q  683 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||||||| |||| ||  |||||||| |||||||||||||    
T  37051339 ttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctctc 37051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 683 - 732
Target Start/End: Original strand, 47824146 - 47824195
Alignment:
Q  683 ttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| |||||| ||||| ||| ||||||| ||||||||||||||    
T  47824146 ttgggatctgagagtgtactcctcctcaaagtctctagttcgattctctc 47824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 676 - 723
Target Start/End: Original strand, 26703149 - 26703196
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttc 723  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26703149 tattggcttgggatctgggagtgtgctccttctcgaggtctcaggttc 26703196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 682 - 732
Target Start/End: Original strand, 3174957 - 3175007
Alignment:
Q  682 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  3174957 cttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctc 3175007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 2446331 - 2446388
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||  ||||||||||||||| |||||  |||||||||||||||||||    
T  2446331 gtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctc 2446388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 26459463 - 26459406
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| |||||||||||||||| ||| | |||||| |||||||||||||    
T  26459463 gtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 26459406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 680 - 732
Target Start/End: Complemental strand, 9871334 - 9871282
Alignment:
Q  680 ggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  9871334 ggcttgggatttgggagtgtgctcctcctcgaagtctcagattcgattctctc 9871282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 677 - 733
Target Start/End: Complemental strand, 17041063 - 17041007
Alignment:
Q  677 attggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 733  Q
    ||||||||||||||||| ||||||||||| ||| | |||||| ||||||||||||||    
T  17041063 attggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctca 17041007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 676 - 732
Target Start/End: Original strand, 23552142 - 23552198
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| ||||||| |||||||||||||||| ||| | ||||||||||||||||||||    
T  23552142 tattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 727
Target Start/End: Original strand, 48771961 - 48772013
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 727  Q
    ||||||||||||||||||||||||||||||| || || |||||| ||||||||    
T  48771961 gtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 20335884 - 20335829
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||| |||||||||||    
T  20335884 gtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctc 20335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 7309378 - 7309436
Alignment:
Q  675 gtattggcttgggatctggg-agtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| ||||||| |||||| ||||||||||| ||||| ||||||||||||||||||||    
T  7309378 gtattagcttggggtctggggagtgtgctcctcctcgaggtctcaagttcgattctctc 7309436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 43215207 - 43215264
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||||| || ||||||||||||| ||| | |||||| |||||||||||||    
T  43215207 gtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctc 43215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 45709761 - 45709704
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| |||||||||||| |||||||||||| ||||| |||||| |||||||| ||||    
T  45709761 gtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 727
Target Start/End: Original strand, 25590634 - 25590686
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgatt 727  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||  ||||||||    
T  25590634 gtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgatt 25590686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 718
Target Start/End: Original strand, 21854571 - 21854614
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 718  Q
    ||||||||| ||||||||||||||||||||| ||| ||||||||    
T  21854571 gtattggctagggatctgggagtgtgctcctcctcaaagtctca 21854614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 22760886 - 22760941
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    |||||| ||||||| |||||||||||||||| ||| | |||||| |||||||||||    
T  22760886 gtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 718
Target Start/End: Complemental strand, 25021388 - 25021345
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctca 718  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||    
T  25021388 gtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 731
Target Start/End: Original strand, 30217903 - 30217958
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctct 731  Q
    ||||||||||  |||||| ||||||||||| ||| | |||||||||||||||||||    
T  30217903 tattggcttgatatctggaagtgtgctcctcctcaaggtctcaagttcgattctct 30217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 732
Target Start/End: Complemental strand, 33869500 - 33869441
Alignment:
Q  673 tagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||| || |||| ||||||||||||||| | |||||  |||||||||||||    
T  33869500 tagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctc 33869441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 37085602 - 37085547
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||| ||||||||||||| | ||||| || ||| |||||||||||    
T  37085602 gtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Original strand, 43590930 - 43590985
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||||||||||  ||||||||||||||| ||| | |||||| |||||||||||    
T  43590930 gtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctc 43590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 670 - 732
Target Start/End: Complemental strand, 5668629 - 5668567
Alignment:
Q  670 atatagtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| ||||||||||||||  ||| ||||||||||| ||||| |||||| | |||||||||||    
T  5668629 atatggtattggcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctc 5668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 678 - 728
Target Start/End: Original strand, 5934147 - 5934197
Alignment:
Q  678 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattc 728  Q
    |||||||||||||||||||||||||||| || || || ||| |||||||||    
T  5934147 ttggcttgggatctgggagtgtgctcctccttgaggtttcatgttcgattc 5934197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 685 - 727
Target Start/End: Complemental strand, 21410753 - 21410711
Alignment:
Q  685 gggatctgggagtgtgctccttctcgaagtctcaagttcgatt 727  Q
    |||||||| |||||||||||| ||||||||||||| |||||||    
T  21410753 gggatctgagagtgtgctcctcctcgaagtctcaaattcgatt 21410711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 678 - 740
Target Start/End: Original strand, 22035424 - 22035486
Alignment:
Q  678 ttggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtgtca 740  Q
    ||||||||||| ||| |||||||||||| ||||| | | || ||||||||||||| |||||||    
T  22035424 ttggcttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtca 22035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 729
Target Start/End: Complemental strand, 29785354 - 29785300
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    |||| |||||||||||||| ||||||||||| ||| | |||||| ||||||||||    
T  29785354 gtataggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattct 29785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 682 - 732
Target Start/End: Complemental strand, 37162396 - 37162346
Alignment:
Q  682 cttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| ||| |||||||||||| |||||| | ||||||||||||||||||||    
T  37162396 cttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctc 37162346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 675 - 737
Target Start/End: Original strand, 39631867 - 39631929
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctcatgtg 737  Q
    |||||||||||||| ||||||||  |||||| ||| | |||||| ||||||||||||| ||||    
T  39631867 gtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtg 39631929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 7721392 - 7721449
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||| |||||| |||||||||| ||||| ||| | |||||| |||||||||||||    
T  7721392 gtattggtttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctc 7721449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 9608682 - 9608625
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||||||||||||||||| ||||| ||| |  ||||| |||||||||||||    
T  9608682 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctc 9608625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 9836254 - 9836197
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||| |||||||||||||||||||| ||||| ||| |  ||||| |||||||||||||    
T  9836254 gtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctc 9836197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 17113818 - 17113875
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||| | | ||||||||||||| || ||| | ||||||||||||||||||||    
T  17113818 gtattggcttagaacctgggagtgtgcttctcctcaaggtctcaagttcgattctctc 17113875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 675 - 729
Target Start/End: Complemental strand, 19900 - 19846
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattct 729  Q
    ||||||||||||||||||||||| ||||||| || || |||||||||||||||||    
T  19900 gtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 13099 - 13042
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||| ||||||||||||||||||| ||| | |||||| |||||||||||||    
T  13099 gtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 106071 - 106128
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||| |||||||| | ||||||||||| ||||||||||||| |||||||||||||||    
T  106071 gtattagcttgggaccagggagtgtgctgcttctcgaagtctaaagttcgattctctc 106128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 733
Target Start/End: Original strand, 10243 - 10300
Alignment:
Q  676 tattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctca 733  Q
    ||||||||||||||||||||||| ||  || |||||||||| ||||| ||||||||||    
T  10243 tattggcttgggatctgggagtgcgcctctcctcgaagtcttaagtttgattctctca 10300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 675 - 730
Target Start/End: Complemental strand, 2523 - 2468
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctc 730  Q
    ||||||| || |||||||||||||||||||| ||| | |||||| |||||||||||    
T  2523 gtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 20015 - 19958
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    |||||||||||| | |||||||| ||||||| ||| | |||||| |||||||||||||    
T  20015 gtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctc 19958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 25400 - 25343
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||| ||  ||||||||||||||||||| | |||||| |||||||| ||||    
T  25400 gtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctc 25343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Complemental strand, 41686 - 41629
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||| |||||| |||| ||||||| ||||| |||||| |||| ||||||||    
T  41686 gtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctc 41629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 732
Target Start/End: Original strand, 49329 - 49386
Alignment:
Q  675 gtattggcttgggatctgggagtgtgctccttctcgaagtctcaagttcgattctctc 732  Q
    ||||||||||||||| || ||||||||||||  |||| || ||| |||||||||||||    
T  49329 gtattggcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctc 49386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University