View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13940_high_35 (Length: 366)
Name: NF13940_high_35
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13940_high_35 |
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Alignment Details
Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 12450401 - 12450219
Alignment:
| Q |
15 |
attatactgtaagggagtttttgtaagttgagaaccaaatactcaattcaactgaaaaactccaaagtactagaaactaatcttgttcatacacaatcaa |
114 |
Q |
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| T |
12450401 |
attatactgtaagggagtttttgtaagttgagaaccaaatactcaattcaactgaaaaactccaaagtactagaaactaatcttgttcatacacaatcaa |
12450302 |
T |
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| Q |
115 |
caagcattttcctcacaaacattaggtaatccacaaacctaaaaaacatgtcaattctacagcaccctttttcatcataaatt |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12450301 |
caagcattttcctcacaaacattaggtaatccacaaacctaaaaaacatgtcaattctacagcaccctttttcatcataaatt |
12450219 |
T |
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