View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13940_high_42 (Length: 335)

Name: NF13940_high_42
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13940_high_42
NF13940_high_42
[»] chr6 (27 HSPs)
chr6 (19-321)||(5685142-5685444)
chr6 (19-121)||(14936482-14936584)
chr6 (24-128)||(26602319-26602423)
chr6 (24-124)||(2830335-2830435)
chr6 (24-124)||(6330115-6330215)
chr6 (24-124)||(8382999-8383099)
chr6 (24-124)||(11572175-11572275)
chr6 (23-116)||(6068969-6069062)
chr6 (24-124)||(8099530-8099630)
chr6 (24-124)||(13853623-13853723)
chr6 (24-124)||(33052824-33052924)
chr6 (24-124)||(35031031-35031131)
chr6 (24-127)||(9644693-9644796)
chr6 (24-127)||(9650710-9650813)
chr6 (24-124)||(8417823-8417923)
chr6 (80-135)||(13043747-13043802)
chr6 (74-124)||(2830415-2830465)
chr6 (74-124)||(6330195-6330245)
chr6 (74-124)||(8099610-8099660)
chr6 (74-124)||(8186447-8186497)
chr6 (74-124)||(8382969-8383019)
chr6 (74-124)||(9644776-9644826)
chr6 (74-124)||(9650793-9650843)
chr6 (74-124)||(11572145-11572195)
chr6 (74-124)||(13853593-13853643)
chr6 (74-124)||(26602403-26602453)
chr6 (24-124)||(6143554-6143654)
[»] chr8 (32 HSPs)
chr8 (24-124)||(31654613-31654713)
chr8 (24-127)||(6552652-6552755)
chr8 (24-124)||(54642-54742)
chr8 (24-124)||(2890192-2890292)
chr8 (24-124)||(3304308-3304408)
chr8 (24-124)||(7785808-7785908)
chr8 (24-124)||(32114505-32114605)
chr8 (41-124)||(8587170-8587253)
chr8 (24-126)||(39571233-39571335)
chr8 (28-125)||(12343174-12343271)
chr8 (24-124)||(7805729-7805829)
chr8 (24-124)||(12763684-12763784)
chr8 (24-124)||(15888382-15888482)
chr8 (24-124)||(32211393-32211493)
chr8 (28-124)||(43199388-43199484)
chr8 (24-124)||(44498217-44498317)
chr8 (24-124)||(7012171-7012271)
chr8 (24-124)||(13578857-13578957)
chr8 (24-124)||(25601030-25601130)
chr8 (74-126)||(31654693-31654745)
chr8 (24-124)||(33289291-33289391)
chr8 (64-119)||(28463616-28463671)
chr8 (74-124)||(54612-54662)
chr8 (74-124)||(2890162-2890212)
chr8 (74-124)||(6552735-6552785)
chr8 (74-124)||(7785778-7785828)
chr8 (30-88)||(12300531-12300589)
chr8 (74-124)||(15888352-15888402)
chr8 (74-124)||(33289261-33289311)
chr8 (74-124)||(39571203-39571253)
chr8 (19-72)||(4460525-4460578)
chr8 (19-123)||(30171483-30171587)
[»] chr4 (38 HSPs)
chr4 (24-124)||(20538716-20538816)
chr4 (20-109)||(31013036-31013125)
chr4 (24-137)||(47833598-47833711)
chr4 (24-124)||(3372121-3372221)
chr4 (24-124)||(3904713-3904813)
chr4 (24-124)||(3992976-3993076)
chr4 (24-124)||(43900549-43900649)
chr4 (24-124)||(46797725-46797825)
chr4 (24-124)||(48336263-48336363)
chr4 (24-115)||(33621805-33621896)
chr4 (24-126)||(6121923-6122025)
chr4 (23-93)||(50430447-50430517)
chr4 (24-125)||(24704369-24704470)
chr4 (24-125)||(53337369-53337470)
chr4 (24-127)||(5986873-5986976)
chr4 (24-127)||(52756672-52756775)
chr4 (26-124)||(44900080-44900178)
chr4 (74-127)||(51894579-51894632)
chr4 (24-124)||(7579310-7579410)
chr4 (28-124)||(41469800-41469896)
chr4 (28-124)||(42797732-42797828)
chr4 (28-124)||(47838651-47838747)
chr4 (24-124)||(51894612-51894712)
chr4 (74-124)||(3422140-3422190)
chr4 (74-124)||(6121893-6121943)
chr4 (74-124)||(7579390-7579440)
chr4 (74-128)||(20538682-20538736)
chr4 (74-124)||(46797805-46797855)
chr4 (74-124)||(47833691-47833741)
chr4 (43-93)||(51531502-51531552)
chr4 (74-124)||(52756755-52756805)
chr4 (74-123)||(40913190-40913239)
chr4 (23-124)||(40913218-40913319)
chr4 (68-124)||(3904683-3904739)
chr4 (68-124)||(5986950-5987006)
chr4 (68-124)||(17236862-17236918)
chr4 (24-124)||(33551201-33551301)
chr4 (41-93)||(41594685-41594737)
[»] chr3 (38 HSPs)
chr3 (24-124)||(17653712-17653812)
chr3 (24-124)||(34080060-34080160)
chr3 (24-124)||(37508921-37509021)
chr3 (23-124)||(9213516-9213617)
chr3 (28-109)||(53275310-53275391)
chr3 (24-124)||(10297979-10298079)
chr3 (24-124)||(19557082-19557182)
chr3 (24-124)||(22721931-22722031)
chr3 (24-124)||(44785426-44785526)
chr3 (24-124)||(49823411-49823511)
chr3 (25-124)||(33942963-33943062)
chr3 (23-124)||(34988075-34988176)
chr3 (28-124)||(4238594-4238690)
chr3 (24-124)||(8817416-8817516)
chr3 (24-124)||(36095710-36095810)
chr3 (24-124)||(42507385-42507485)
chr3 (28-124)||(46208030-46208126)
chr3 (24-124)||(48340397-48340497)
chr3 (24-124)||(51406673-51406773)
chr3 (24-118)||(2787862-2787956)
chr3 (24-118)||(40691026-40691120)
chr3 (21-126)||(2131699-2131804)
chr3 (41-126)||(35513471-35513556)
chr3 (24-124)||(9111524-9111624)
chr3 (28-124)||(21295360-21295456)
chr3 (28-124)||(38964392-38964488)
chr3 (24-124)||(42170376-42170476)
chr3 (74-126)||(48340477-48340529)
chr3 (74-124)||(10298059-10298109)
chr3 (74-124)||(19557052-19557102)
chr3 (74-124)||(34080030-34080080)
chr3 (74-124)||(40690996-40691046)
chr3 (74-128)||(42507351-42507405)
chr3 (74-124)||(44785396-44785446)
chr3 (74-124)||(49823381-49823431)
chr3 (66-127)||(5323279-5323340)
chr3 (78-127)||(6013333-6013382)
chr3 (41-93)||(43323091-43323143)
[»] chr7 (30 HSPs)
chr7 (24-127)||(31319429-31319532)
chr7 (24-124)||(1565759-1565859)
chr7 (24-124)||(1738477-1738577)
chr7 (24-124)||(7240749-7240849)
chr7 (24-124)||(22285699-22285799)
chr7 (24-124)||(36016226-36016326)
chr7 (24-124)||(36583395-36583495)
chr7 (24-124)||(38063943-38064043)
chr7 (24-124)||(46840860-46840960)
chr7 (22-109)||(28469496-28469583)
chr7 (24-118)||(94348-94442)
chr7 (24-124)||(7482225-7482325)
chr7 (24-124)||(9268756-9268856)
chr7 (24-124)||(23314169-23314269)
chr7 (74-124)||(31319399-31319449)
chr7 (67-124)||(24710742-24710799)
chr7 (24-124)||(4790248-4790348)
chr7 (74-126)||(23314137-23314189)
chr7 (24-124)||(38441460-38441560)
chr7 (74-126)||(46840940-46840992)
chr7 (19-126)||(25018389-25018496)
chr7 (74-124)||(1565729-1565779)
chr7 (74-124)||(1738447-1738497)
chr7 (74-124)||(7240829-7240879)
chr7 (74-124)||(7482305-7482355)
chr7 (74-124)||(7661156-7661206)
chr7 (74-124)||(9268836-9268886)
chr7 (74-124)||(22285779-22285829)
chr7 (28-124)||(9575409-9575505)
chr7 (24-124)||(28536781-28536881)
[»] chr5 (21 HSPs)
chr5 (24-127)||(9395347-9395450)
chr5 (24-124)||(37148985-37149085)
chr5 (24-125)||(11795167-11795268)
chr5 (24-124)||(582989-583089)
chr5 (24-124)||(13033051-13033151)
chr5 (24-124)||(13103024-13103124)
chr5 (24-124)||(23359942-23360042)
chr5 (24-124)||(36563568-36563668)
chr5 (24-124)||(41989437-41989537)
chr5 (74-128)||(37148951-37149005)
chr5 (28-124)||(11574114-11574210)
chr5 (41-124)||(26350397-26350480)
chr5 (74-124)||(6126904-6126954)
chr5 (74-124)||(9395430-9395480)
chr5 (74-124)||(13103104-13103154)
chr5 (74-124)||(17025704-17025754)
chr5 (74-124)||(36563538-36563588)
chr5 (74-124)||(41989407-41989457)
chr5 (74-127)||(583069-583121)
chr5 (24-72)||(6126876-6126924)
chr5 (24-124)||(17025624-17025724)
[»] chr2 (39 HSPs)
chr2 (23-110)||(23227301-23227388)
chr2 (24-124)||(3055558-3055658)
chr2 (24-124)||(13197740-13197840)
chr2 (24-124)||(15372226-15372326)
chr2 (24-124)||(15896842-15896942)
chr2 (24-124)||(37990043-37990143)
chr2 (24-124)||(41478669-41478769)
chr2 (24-124)||(44397547-44397647)
chr2 (24-124)||(44398686-44398786)
chr2 (23-110)||(41492925-41493012)
chr2 (24-124)||(12337967-12338067)
chr2 (24-124)||(13344484-13344584)
chr2 (24-126)||(6648549-6648651)
chr2 (74-128)||(12337933-12337987)
chr2 (24-126)||(16044347-16044449)
chr2 (24-118)||(16243813-16243907)
chr2 (28-114)||(20900674-20900760)
chr2 (74-124)||(41492896-41492946)
chr2 (74-126)||(15896922-15896974)
chr2 (24-124)||(37666640-37666740)
chr2 (24-124)||(38917552-38917652)
chr2 (41-124)||(4683979-4684062)
chr2 (74-125)||(15372306-15372357)
chr2 (74-124)||(3055638-3055688)
chr2 (74-124)||(6648519-6648569)
chr2 (74-124)||(9047755-9047805)
chr2 (24-118)||(9047785-9047879)
chr2 (74-124)||(13197710-13197760)
chr2 (66-124)||(13724102-13724160)
chr2 (74-124)||(37990013-37990063)
chr2 (74-124)||(38917522-38917572)
chr2 (74-124)||(41478639-41478689)
chr2 (74-124)||(44398766-44398816)
chr2 (19-64)||(13952559-13952604)
chr2 (19-64)||(14093766-14093811)
chr2 (19-104)||(14740487-14740572)
chr2 (44-125)||(31150652-31150733)
chr2 (25-125)||(12170430-12170530)
chr2 (70-110)||(30985768-30985808)
[»] chr1 (35 HSPs)
chr1 (24-127)||(47216729-47216832)
chr1 (24-124)||(9981647-9981747)
chr1 (24-124)||(27159388-27159488)
chr1 (24-124)||(31842825-31842925)
chr1 (24-124)||(39401996-39402096)
chr1 (24-124)||(44668123-44668223)
chr1 (25-124)||(16448139-16448238)
chr1 (24-118)||(14984843-14984937)
chr1 (23-124)||(11897054-11897155)
chr1 (24-124)||(11795933-11796033)
chr1 (24-124)||(23278031-23278131)
chr1 (24-124)||(26471095-26471195)
chr1 (24-124)||(34042696-34042796)
chr1 (24-126)||(1050886-1050988)
chr1 (74-124)||(11897134-11897184)
chr1 (66-128)||(11989853-11989915)
chr1 (74-124)||(34042776-34042826)
chr1 (28-126)||(44955240-44955338)
chr1 (74-127)||(39401963-39402016)
chr1 (68-124)||(12483628-12483684)
chr1 (24-132)||(12483658-12483766)
chr1 (25-124)||(17556752-17556852)
chr1 (74-126)||(31842793-31842845)
chr1 (74-126)||(47777479-47777531)
chr1 (24-116)||(47777511-47777603)
chr1 (74-125)||(11796013-11796064)
chr1 (74-124)||(14984917-14984967)
chr1 (74-124)||(17556833-17556883)
chr1 (74-124)||(25694399-25694449)
chr1 (74-124)||(27159358-27159408)
chr1 (74-124)||(44668093-44668143)
chr1 (74-124)||(47216699-47216749)
chr1 (24-109)||(47588367-47588452)
chr1 (24-124)||(47969694-47969795)
chr1 (74-126)||(26471063-26471115)
[»] scaffold0204 (1 HSPs)
scaffold0204 (24-124)||(23785-23885)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-121)||(12378-12480)
[»] scaffold1707 (1 HSPs)
scaffold1707 (24-117)||(1342-1435)
[»] scaffold0482 (1 HSPs)
scaffold0482 (24-124)||(12860-12960)
[»] scaffold0464 (1 HSPs)
scaffold0464 (24-124)||(6161-6261)
[»] scaffold0009 (2 HSPs)
scaffold0009 (24-124)||(49505-49605)
scaffold0009 (68-125)||(49579-49636)
[»] scaffold0650 (1 HSPs)
scaffold0650 (29-124)||(20-114)


Alignment Details
Target: chr6 (Bit Score: 259; Significance: 1e-144; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 5685444 - 5685142
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||     
T  5685444 aaacatttgggtcagcaaaatatgatgtaacttgttaataatttggtccaaatacatcaacttttgttgacccaaatgttttttattaatagaaccagaa 5685345  T
Q  119 ggagtaataagttaataatcaaggagagaaattacttgaagaagtagggggtgagccagggctaagaggtggtgggaatagtggaggaaaaggaagtaag 218  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5685344 ggaataatatgttaataatcaaggagagaaattacttgaagaagtagggggtgagccagggctaagaggtggtgggaacagtggaggaaaaggaagtaag 5685245  T
Q  219 ggagcaggaaaaattgattttggtggtggcggcggcggcggtgatggagttaaacttggtattactattggtggaaaaggaaatgatggtggtggacttg 318  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5685244 ggagcaggaaaaattgattttggtggtggcggcggcggtggtgatggagttaaacctggtattactattggtggaaaaggaaatgatggtggtggacttg 5685145  T
Q  319 atg 321  Q
    |||    
T  5685144 atg 5685142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 14936482 - 14936584
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||| |||||||||||  |||||||||| ||||| |||||| |||||||| ||||||| |||||||||||||| ||| |||| ||||| ||| |||    
T  14936482 aaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagag 14936581  T
Q  119 gga 121  Q
    |||    
T  14936582 gga 14936584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 26602423 - 26602319
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  26602423 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 26602324  T
Q  124 aataa 128  Q
    |||||    
T  26602323 aataa 26602319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 2830435 - 2830335
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  2830435 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 2830336  T
Q  124 a 124  Q
    |    
T  2830335 a 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 6330215 - 6330115
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  6330215 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 6330116  T
Q  124 a 124  Q
    |    
T  6330115 a 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 8382999 - 8383099
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  8382999 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 8383098  T
Q  124 a 124  Q
    |    
T  8383099 a 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 11572175 - 11572275
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  11572175 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 11572274  T
Q  124 a 124  Q
    |    
T  11572275 a 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 6068969 - 6069062
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccgg 116  Q
    |||| ||||||||||| |||| |||||  ||||| ||||| | ||||||| || |||||||||||||| |||| |||||||| ||||| |||||    
T  6068969 atttaggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 8099630 - 8099530
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  8099630 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 8099531  T
Q  124 a 124  Q
    |    
T  8099530 a 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 13853623 - 13853723
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||| ||| |||    
T  13853623 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagt 13853722  T
Q  124 a 124  Q
    |    
T  13853723 a 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 33052824 - 33052924
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  33052824 tttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 33052923  T
Q  124 a 124  Q
    |    
T  33052924 a 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 35031031 - 35031131
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| | | |||| ||||| |||||||| |||    
T  35031031 tttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagt 35031130  T
Q  124 a 124  Q
    |    
T  35031131 a 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 9644796 - 9644693
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |||| ||| |||| ||||| |||||||| |||    
T  9644796 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagt 9644697  T
Q  124 aata 127  Q
    ||||    
T  9644696 aata 9644693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 9650813 - 9650710
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |||| ||| |||| ||||| |||||||| |||    
T  9650813 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagt 9650714  T
Q  124 aata 127  Q
    ||||    
T  9650713 aata 9650710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 8417823 - 8417923
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||  ||| ||||||||    
T  8417823 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagt 8417922  T
Q  124 a 124  Q
    |    
T  8417923 a 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 13043802 - 13043747
Alignment:
Q  80 ttttgttgacccaaatgtcttttattaatagaaccggagggagtaataagttaata 135  Q
    ||||||||||| |||| ||| |||| |||||||||||||| |||||||| ||||||    
T  13043802 ttttgttgacctaaatttctcttataaatagaaccggaggtagtaataaattaata 13043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 2830415 - 2830465
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  2830415 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 6330195 - 6330245
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6330195 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 8099610 - 8099660
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  8099610 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 8186447 - 8186497
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||||||| |||||| |||||||| ||||| ||||| |||||||    
T  8186447 atcaacttttgttgatccaaatttcttttataaataggaccggggggagta 8186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 8383019 - 8382969
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  8383019 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 9644776 - 9644826
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9644776 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 9650793 - 9650843
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9650793 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 11572195 - 11572145
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  11572195 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 13853643 - 13853593
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13853643 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 26602403 - 26602453
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  26602403 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 6143654 - 6143554
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||| ||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||| |||    
T  6143654 tttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagt 6143555  T
Q  124 a 124  Q
    |    
T  6143554 a 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 31654713 - 31654613
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  31654713 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 31654614  T
Q  124 a 124  Q
    |    
T  31654613 a 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 6552755 - 6552652
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  6552755 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 6552656  T
Q  124 aata 127  Q
    ||||    
T  6552655 aata 6552652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 54642 - 54742
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  54642 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 54741  T
Q  124 a 124  Q
    |    
T  54742 a 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 2890192 - 2890292
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  2890192 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 2890291  T
Q  124 a 124  Q
    |    
T  2890292 a 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 3304308 - 3304408
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  3304308 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 3304407  T
Q  124 a 124  Q
    |    
T  3304408 a 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 7785808 - 7785908
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  7785808 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 7785907  T
Q  124 a 124  Q
    |    
T  7785908 a 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 32114505 - 32114605
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  32114505 tttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 32114604  T
Q  124 a 124  Q
    |    
T  32114605 a 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 8587253 - 8587170
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||| ||||| ||||| ||| ||||| ||||||||||||||||| || | ||| |||| ||||| |||||||||||||    
T  8587253 tgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 39571233 - 39571335
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |||| ||| |||| ||||| |||||||| |||    
T  39571233 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagt 39571332  T
Q  124 aat 126  Q
    |||    
T  39571333 aat 39571335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 12343174 - 12343271
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 125  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||||    
T  12343174 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaa 12343271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 7805729 - 7805829
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  7805729 tttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 7805828  T
Q  124 a 124  Q
    |    
T  7805829 a 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 12763684 - 12763784
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||  |||||||| |||    
T  12763684 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagt 12763783  T
Q  124 a 124  Q
    |    
T  12763784 a 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15888382 - 15888482
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  15888382 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 15888481  T
Q  124 a 124  Q
    |    
T  15888482 a 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 32211393 - 32211493
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  32211393 tttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagt 32211492  T
Q  124 a 124  Q
    |    
T  32211493 a 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 43199388 - 43199484
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| ||||    
T  43199388 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 44498217 - 44498317
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  44498217 tttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 44498316  T
Q  124 a 124  Q
    |    
T  44498317 a 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 7012271 - 7012171
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |||| ||| |||| ||||| |||||||| |||    
T  7012271 tttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagt 7012172  T
Q  124 a 124  Q
    |    
T  7012171 a 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 13578957 - 13578857
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  |||||| |||||| |||| ||| |||| |||||||| ||||| |||    
T  13578957 tttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagt 13578858  T
Q  124 a 124  Q
    |    
T  13578857 a 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 25601030 - 25601130
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  | |||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||| |||    
T  25601030 tttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagt 25601129  T
Q  124 a 124  Q
    |    
T  25601130 a 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 31654693 - 31654745
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||| ||||||    
T  31654693 atcaacttttgttgacccaaaattcttttataaataggaccggaggaagtaat 31654745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 33289291 - 33289391
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| |||||| | |||| ||| |||| ||||| |||||||| |||    
T  33289291 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagt 33289390  T
Q  124 a 124  Q
    |    
T  33289391 a 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 28463671 - 28463616
Alignment:
Q  64 gtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagg 119  Q
    ||||||||| |||||||||||||||||||| | ||| |||| ||||| ||||||||    
T  28463671 gtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggagg 28463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 54662 - 54612
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  54662 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 2890212 - 2890162
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  2890212 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 6552735 - 6552785
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6552735 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 7785828 - 7785778
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7785828 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 12300531 - 12300589
Alignment:
Q  30 tcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttga 88  Q
    |||||||||| ||||||||||  |||| ||||||  ||||||| |||||||||||||||    
T  12300531 tcaacaaaatgtgatgtatctgattaagaatttgaaccaaatagatcaacttttgttga 12300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 15888402 - 15888352
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||| ||||||||||    
T  15888402 atcaacttttgttgacccaaaattctcttataaatagaactggagggagta 15888352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 33289311 - 33289261
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  33289311 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 39571253 - 39571203
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  39571253 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 4460578 - 4460525
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata 72  Q
    |||||||| |||||||||||| ||||||||||  |||| ||||||| |||||||    
T  4460578 aaacatttcggtcaacaaaatgtgatgtatctgattaagaatttggaccaaata 4460525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 30171587 - 30171483
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    ||||||||  |||||||||||  |||||||||  |||| ||||||| |||| || || ||||||||||||| ||||  ||| || | ||||| | |||||    
T  30171587 aaacatttaagtcaacaaaatgcgatgtatctgattaagaatttggaccaagtacattaacttttgttgactcaaaattctcttgtaaataggatcggag 30171488  T
Q  119 ggagt 123  Q
    |||||    
T  30171487 ggagt 30171483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 20538716 - 20538816
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||| |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  20538716 tttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 20538815  T
Q  124 a 124  Q
    |    
T  20538816 a 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 31013125 - 31013036
Alignment:
Q  20 aacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 109  Q
    ||||||| ||||||||||| ||||||||||| ||||| |||||   ||||||| ||| ||||||||||| | ||||||||||||| ||||    
T  31013125 aacatttaggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 47833711 - 47833598
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  47833711 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 47833612  T
Q  124 aataagttaataat 137  Q
    | ||  ||||||||    
T  47833611 attattttaataat 47833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 3372221 - 3372121
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  3372221 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 3372122  T
Q  124 a 124  Q
    |    
T  3372121 a 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 3904713 - 3904813
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  ||||||||||||| |||| |||||||| ||||| |||||||| |||    
T  3904713 tttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagt 3904812  T
Q  124 a 124  Q
    |    
T  3904813 a 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 3993076 - 3992976
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  3993076 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagt 3992977  T
Q  124 a 124  Q
    |    
T  3992976 a 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 43900649 - 43900549
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||| |||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  43900649 tttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagt 43900550  T
Q  124 a 124  Q
    |    
T  43900549 a 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 46797825 - 46797725
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||| ||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| |||||||||||||| |||    
T  46797825 tttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagt 46797726  T
Q  124 a 124  Q
    |    
T  46797725 a 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 48336363 - 48336263
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  48336363 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 48336264  T
Q  124 a 124  Q
    |    
T  48336263 a 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 33621896 - 33621805
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccg 115  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||||||||    
T  33621896 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccg 33621805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 6121923 - 6122025
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |||| ||| |||| ||||| |||||||| |||    
T  6121923 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagt 6122022  T
Q  124 aat 126  Q
    |||    
T  6122023 aat 6122025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 50430447 - 50430517
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 93  Q
    ||||||||||||||||  |||||||||| ||||| ||||   |||||||| ||||||||||||||||||||    
T  50430447 atttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaa 50430517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 24704470 - 24704369
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  | |||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  24704470 tttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 24704371  T
Q  124 aa 125  Q
    ||    
T  24704370 aa 24704369  T

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Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 53337470 - 53337369
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||| ||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  53337470 tttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 53337371  T
Q  124 aa 125  Q
    ||    
T  53337370 aa 53337369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 5986976 - 5986873
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  ||||||||||||| | || ||| |||| ||||||| |||||| |||    
T  5986976 tttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagt 5986877  T
Q  124 aata 127  Q
    ||||    
T  5986876 aata 5986873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 52756775 - 52756672
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| |||||||| |||| ||| |||| ||||| |||||||  |||    
T  52756775 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagt 52756676  T
Q  124 aata 127  Q
    ||||    
T  52756675 aata 52756672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 44900178 - 44900080
Alignment:
Q  26 tgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||  ||| |||||| |||||  | |||| ||| ||| |||||||||||||||||  ||| ||| |||| ||||| |||||||||||||    
T  44900178 tgggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 51894632 - 51894579
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 127  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  51894632 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 51894579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 7579410 - 7579310
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||| ||| |||| ||| |||| ||||| |||||||| |||    
T  7579410 tttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagt 7579311  T
Q  124 a 124  Q
    |    
T  7579310 a 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 41469800 - 41469896
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| |||||||| ||||| |||| ||| ||||    
T  41469800 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 42797828 - 42797732
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| ||||  |||| |||||||| ||||    
T  42797828 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 47838651 - 47838747
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||| ||||    
T  47838651 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 51894612 - 51894712
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||| | ||  ||||||||||||| |||| | | |||| ||||| |||||||| |||    
T  51894612 tttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagt 51894711  T
Q  124 a 124  Q
    |    
T  51894712 a 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 3422140 - 3422190
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3422140 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 6121943 - 6121893
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6121943 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 7579390 - 7579440
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||| ||||    
T  7579390 atcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 20538736 - 20538682
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 128  Q
    ||||| |||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  20538736 atcaaattttgttgacccaaaattctcttataaataggaccggagggagtaataa 20538682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 46797805 - 46797855
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  46797805 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 47833691 - 47833741
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  47833691 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 51531552 - 51531502
Alignment:
Q  43 atgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 93  Q
    |||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  51531552 atgtatcttgttcaaaatttggaccaaatacatcaatttttgttgacccaa 51531502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 52756755 - 52756805
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  |||||||| ||||| |||| ||||||||    
T  52756755 atcaacttttgttgacccaaaattcttttataaataggaccgaagggagta 52756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 40913239 - 40913190
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||||||||| |||||| ||| |||| ||||| ||||||||||||    
T  40913239 atcaacttttgttgatccaaatttctcttataaataggaccggagggagt 40913190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 40913218 - 40913319
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggag 122  Q
    |||||| |||||||||  |||| ||||  ||||| ||||  ||||||||| ||  ||||||||||| | |||| ||| |||| ||||| |||||||||||    
T  40913218 atttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggag 40913317  T
Q  123 ta 124  Q
    ||    
T  40913318 ta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 3904739 - 3904683
Alignment:
Q  68 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||| ||||| |||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 5986950 - 5987006
Alignment:
Q  68 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| ||||||| |||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagta 5987006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 17236862 - 17236918
Alignment:
Q  68 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||| |||||||||||||||||||||| | | |||| ||||| ||||||| |||||    
T  17236862 aaatacatcaacttttgttgacccaaatttttcttataaataggaccggagagagta 17236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 33551301 - 33551201
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||  ||||||  |||||||||| ||||| ||||  ||| ||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  33551301 tttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 33551202  T
Q  124 a 124  Q
    |    
T  33551201 a 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 41594737 - 41594685
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 93  Q
    |||||||||| ||| | ||||||| ||| ||| ||||||||||||||||||||    
T  41594737 tgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaa 41594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 17653812 - 17653712
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  17653812 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 17653713  T
Q  124 a 124  Q
    |    
T  17653712 a 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 34080060 - 34080160
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||||||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  34080060 tttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 34080159  T
Q  124 a 124  Q
    |    
T  34080160 a 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 37509021 - 37508921
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  37509021 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 37508922  T
Q  124 a 124  Q
    |    
T  37508921 a 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 9213617 - 9213516
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggag 122  Q
    |||| |||||||||||  |||||||| | ||||  || || ||||| ||| ||||||||||||||||  ||||||||||||| ||||| |||||||||||    
T  9213617 atttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggag 9213518  T
Q  123 ta 124  Q
    ||    
T  9213517 ta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 53275391 - 53275310
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 109  Q
    |||||||||||||||||||||||  |||| |||||||   ||||| ||||| |||||||||||||||| |||||||| ||||    
T  53275391 ggtcaacaaaatatgatgtatctaattaagaatttggattaaatacatcaatttttgttgacccaaatatcttttataaata 53275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 10298079 - 10297979
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  10298079 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 10297980  T
Q  124 a 124  Q
    |    
T  10297979 a 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 19557082 - 19557182
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  19557082 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 19557181  T
Q  124 a 124  Q
    |    
T  19557182 a 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 22722031 - 22721931
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  22722031 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 22721932  T
Q  124 a 124  Q
    |    
T  22721931 a 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 44785426 - 44785526
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  44785426 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 44785525  T
Q  124 a 124  Q
    |    
T  44785526 a 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 49823411 - 49823511
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  49823411 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 49823510  T
Q  124 a 124  Q
    |    
T  49823511 a 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 33942963 - 33943062
Alignment:
Q  25 ttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||||||  |||||||||| ||||| ||||  ||||||||| || |||||||||||||| || | |||||||| ||||| | |||| ||||||    
T  33942963 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcggaaggagta 33943062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 34988176 - 34988075
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggag 122  Q
    ||||| |||||||| |  |||||||||| ||||| ||  ||| ||| ||| |||||||||||||||||||||||||| | || ||||| |||| ||||||    
T  34988176 atttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaaatgtctctaataaataggaccgaagggag 34988077  T
Q  123 ta 124  Q
    ||    
T  34988076 ta 34988075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 4238690 - 4238594
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| ||||    
T  4238690 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 8817416 - 8817516
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||| ||| |||    
T  8817416 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagt 8817515  T
Q  124 a 124  Q
    |    
T  8817516 a 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 36095710 - 36095810
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| | | |||| ||||| ||||||||||||    
T  36095710 tttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagt 36095809  T
Q  124 a 124  Q
    |    
T  36095810 a 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 42507385 - 42507485
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||| | ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  42507385 tttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagt 42507484  T
Q  124 a 124  Q
    |    
T  42507485 a 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 46208126 - 46208030
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||||||||    
T  46208126 ggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 48340497 - 48340397
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| || | ||||| |||||||| |||    
T  48340497 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagt 48340398  T
Q  124 a 124  Q
    |    
T  48340397 a 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 51406773 - 51406673
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||  |||||||| |||    
T  51406773 tttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagt 51406674  T
Q  124 a 124  Q
    |    
T  51406673 a 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 2787862 - 2787956
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||    
T  2787862 tttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 2787956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 40691026 - 40691120
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||| ||| |||| ||| |||| ||||| |||||||    
T  40691026 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggag 40691120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 2131699 - 2131804
Alignment:
Q  21 acatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggaggg 120  Q
    ||||||||||||||||||  |  |||| || ||  | ||||| | ||| ||| |||||||||||||||||||||||||| | || | ||| |||||||||    
T  2131699 acatttgggtcaacaaaagttactgtacctggtgcaaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggaggg 2131798  T
Q  121 agtaat 126  Q
    ||||||    
T  2131799 agtaat 2131804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 35513556 - 35513471
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||| ||||||||||    
T  35513556 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagtaat 35513471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 9111524 - 9111624
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |||| ||| |||| ||||| |||| ||| |||    
T  9111524 tttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagt 9111623  T
Q  124 a 124  Q
    |    
T  9111624 a 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 21295360 - 21295456
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| ||||    
T  21295360 ggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 38964488 - 38964392
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||| | |||| ||| |||| ||||| |||||||| ||||    
T  38964488 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 42170376 - 42170476
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||  |||||||| |||    
T  42170376 tttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagt 42170475  T
Q  124 a 124  Q
    |    
T  42170476 a 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 48340477 - 48340529
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  48340477 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 48340529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 10298059 - 10298109
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  10298059 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 19557102 - 19557052
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  19557102 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 34080080 - 34080030
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  34080080 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 40691046 - 40690996
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  40691046 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 42507405 - 42507351
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 128  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||| ||||||    
T  42507405 atcaacttttgttgacccaaaattctcttataaataggaccggagggaataataa 42507351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 44785446 - 44785396
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||| ||||    
T  44785446 atcaacttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 49823431 - 49823381
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  49823431 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 5323279 - 5323340
Alignment:
Q  66 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 127  Q
    ||||||| |||||||||||||||||||||| |   |||| ||||| | ||||||||||||||    
T  5323279 ccaaatacatcaacttttgttgacccaaattttacttataaatagtatcggagggagtaata 5323340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 6013382 - 6013333
Alignment:
Q  78 acttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 127  Q
    |||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagtaata 6013333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 43323143 - 43323091
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaa 93  Q
    |||||||| | ||||| |||||  |||||||| ||||||||||||||||||||    
T  43323143 tgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaa 43323091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 31319429 - 31319532
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  31319429 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 31319528  T
Q  124 aata 127  Q
    ||||    
T  31319529 aata 31319532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 1565759 - 1565859
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  1565759 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 1565858  T
Q  124 a 124  Q
    |    
T  1565859 a 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 1738477 - 1738577
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  1738477 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 1738576  T
Q  124 a 124  Q
    |    
T  1738577 a 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 7240849 - 7240749
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  7240849 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 7240750  T
Q  124 a 124  Q
    |    
T  7240749 a 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 22285799 - 22285699
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  22285799 tttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 22285700  T
Q  124 a 124  Q
    |    
T  22285699 a 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 36016226 - 36016326
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||    
T  36016226 tttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagt 36016325  T
Q  124 a 124  Q
    |    
T  36016326 a 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 36583495 - 36583395
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  36583495 tttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 36583396  T
Q  124 a 124  Q
    |    
T  36583395 a 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 38063943 - 38064043
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  38063943 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 38064042  T
Q  124 a 124  Q
    |    
T  38064043 a 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 46840960 - 46840860
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  46840960 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 46840861  T
Q  124 a 124  Q
    |    
T  46840860 a 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 28469583 - 28469496
Alignment:
Q  22 catttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 109  Q
    ||||| |||||| ||||| ||||||||||  |||||||||||| ||  ||| || |||||||||||||| ||||||||||||| ||||    
T  28469583 catttaggtcaataaaatgtgatgtatctgattaataatttggacctgatacattaacttttgttgacctaaatgtcttttataaata 28469496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 94348 - 94442
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||    
T  94348 tttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 94442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 7482325 - 7482225
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  7482325 tttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 7482226  T
Q  124 a 124  Q
    |    
T  7482225 a 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 9268856 - 9268756
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||| |||| |||    
T  9268856 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagt 9268757  T
Q  124 a 124  Q
    |    
T  9268756 a 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 23314169 - 23314269
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||| ||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  23314169 tttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 23314268  T
Q  124 a 124  Q
    |    
T  23314269 a 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 31319449 - 31319399
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||||||||    
T  31319449 atcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 24710742 - 24710799
Alignment:
Q  67 caaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||| |||||||||||||||||||  |||||||||| || || |||||||||||||    
T  24710742 caaatacatcaacttttgttgacccagttgtcttttataaaaaggaccggagggagta 24710799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 4790348 - 4790248
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||| ||||  |||||||||| ||||| ||||| ||||||||| ||  | ||||||||||| |||| | | |||| ||||| |||||||| |||    
T  4790348 tttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagt 4790249  T
Q  124 a 124  Q
    |    
T  4790248 a 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 23314189 - 23314137
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  23314189 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 23314137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 38441560 - 38441460
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||  |||| ||| |||| ||||| |||||||| |||    
T  38441560 tttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagt 38441461  T
Q  124 a 124  Q
    |    
T  38441460 a 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 46840940 - 46840992
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  46840940 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 46840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 25018389 - 25018496
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    ||||||||  ||||| ||||| | |||||||| ||||| ||| | | ||||||| ||||||||||||||  | |||| | | |||||||||||||  |||    
T  25018389 aaacatttatgtcaataaaatgttatgtatctggttaagaatgttgaccaaatacatcaacttttgttggtctaaatatttcttattaatagaacatgag 25018488  T
Q  119 ggagtaat 126  Q
    ||||||||    
T  25018489 ggagtaat 25018496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 1565779 - 1565729
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||||| ||||||||    
T  1565779 atcaacttttgttgacccaaaattctcttataaatagaaccgaagggagta 1565729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 1738497 - 1738447
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  1738497 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 7240829 - 7240879
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7240829 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 7482305 - 7482355
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  7482305 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 7661156 - 7661206
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||||||||||||||||||  ||| ||||| ||| |||||||||    
T  7661156 atcaacttttgttgacccaaatgtctcatataaataggaccagagggagta 7661206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 9268836 - 9268886
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9268836 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 22285779 - 22285829
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  22285779 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 9575505 - 9575409
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  |||||||||| ||||| ||||  ||| |||||  | ||||||||||||||||| | ||| |||  ||||| ||| |||||||||    
T  9575505 ggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 28536781 - 28536881
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||| |||| ||||  |||||||||| ||||| ||||   |||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  28536781 tttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 28536880  T
Q  124 a 124  Q
    |    
T  28536881 a 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 9395450 - 9395347
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  9395450 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 9395351  T
Q  124 aata 127  Q
    ||||    
T  9395350 aata 9395347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 37148985 - 37149085
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  37148985 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 37149084  T
Q  124 a 124  Q
    |    
T  37149085 a 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 11795268 - 11795167
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||| |||    
T  11795268 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagt 11795169  T
Q  124 aa 125  Q
    ||    
T  11795168 aa 11795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 583089 - 582989
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||| |||||||| |||| ||| |||| ||||| |||||||| |||    
T  583089 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagt 582990  T
Q  124 a 124  Q
    |    
T  582989 a 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 13033151 - 13033051
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  13033151 tttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagt 13033052  T
Q  124 a 124  Q
    |    
T  13033051 a 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 13103124 - 13103024
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  13103124 tttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagt 13103025  T
Q  124 a 124  Q
    |    
T  13103024 a 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 23360042 - 23359942
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||| |||| |||    
T  23360042 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagt 23359943  T
Q  124 a 124  Q
    |    
T  23359942 a 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 36563568 - 36563668
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||| |||    
T  36563568 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagt 36563667  T
Q  124 a 124  Q
    |    
T  36563668 a 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 41989437 - 41989537
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||  ||||| |||||||| |||    
T  41989437 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagt 41989536  T
Q  124 a 124  Q
    |    
T  41989537 a 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 37149005 - 37148951
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 128  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  37149005 atcaacttttgttgacccaaaattctattataaataggaccggagggagtaataa 37148951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 11574114 - 11574210
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||  | |||||||| ||||| || |||| ||| |||  |||| ||||||||||| |||||||| |||| ||||| ||||||| |||||    
T  11574114 ggtcaacaaaagttaatgtatctagttaacaaattggaccagatatttcaatttttgttgacctaaatgtctcttataaataggaccggagagagta 11574210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 26350397 - 26350480
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| | |||||||||||    
T  26350397 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 6126904 - 6126954
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6126904 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 9395430 - 9395480
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9395430 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 13103104 - 13103154
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13103104 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 17025704 - 17025754
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  17025704 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 36563588 - 36563538
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  36563588 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 41989457 - 41989407
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  41989457 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 583069 - 583121
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 127  Q
    |||||||||||||||||||||  ||||||||| |||| | ||||||||||||||    
T  583069 atcaacttttgttgacccaaaattcttttatt-ataggatcggagggagtaata 583121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 6126924 - 6126876
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata 72  Q
    |||||||||||||||  |||||||||| ||||| ||||| |||||||||    
T  6126924 tttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaata 6126876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 17025724 - 17025624
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||  ||||| ||  |||||||| |||| |||| ||| |||| ||||| |||||||| |||    
T  17025724 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagt 17025625  T
Q  124 a 124  Q
    |    
T  17025624 a 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 23227301 - 23227388
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatag 110  Q
    |||| |||||||||||| ||||||||||   ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||| |||||    
T  23227301 atttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaaaatgtctcttataaatag 23227388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 3055658 - 3055558
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  3055658 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 3055559  T
Q  124 a 124  Q
    |    
T  3055558 a 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 13197740 - 13197840
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  13197740 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 13197839  T
Q  124 a 124  Q
    |    
T  13197840 a 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 15372326 - 15372226
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| || |||||||||    
T  15372326 tttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagt 15372227  T
Q  124 a 124  Q
    |    
T  15372226 a 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 15896942 - 15896842
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  15896942 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 15896843  T
Q  124 a 124  Q
    |    
T  15896842 a 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 37990043 - 37990143
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  37990043 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 37990142  T
Q  124 a 124  Q
    |    
T  37990143 a 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 41478669 - 41478769
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  41478669 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 41478768  T
Q  124 a 124  Q
    |    
T  41478769 a 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 44397647 - 44397547
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  44397647 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 44397548  T
Q  124 a 124  Q
    |    
T  44397547 a 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 44398786 - 44398686
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  44398786 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 44398687  T
Q  124 a 124  Q
    |    
T  44398686 a 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 41492925 - 41493012
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatag 110  Q
    ||||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| |||||||| |||||    
T  41492925 atttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaatag 41493012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 12337967 - 12338067
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| | | |||| |||||||||||||| |||    
T  12337967 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagt 12338066  T
Q  124 a 124  Q
    |    
T  12338067 a 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 13344584 - 13344484
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| ||| |||| |||||||||||||| |||    
T  13344584 tttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagt 13344485  T
Q  124 a 124  Q
    |    
T  13344484 a 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 6648549 - 6648651
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | || |||||||| |||| ||| |||| ||||| |||||||| |||    
T  6648549 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagt 6648648  T
Q  124 aat 126  Q
    |||    
T  6648649 aat 6648651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 12337987 - 12337933
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 128  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||||    
T  12337987 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaataa 12337933  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 16044347 - 16044449
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||||| |||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  16044347 tttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 16044446  T
Q  124 aat 126  Q
    |||    
T  16044447 aat 16044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 16243813 - 16243907
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| | | |||| ||||| |||||||    
T  16243813 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggag 16243907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 20900760 - 20900674
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaacc 114  Q
    |||||||||||  ||| |||||| ||| | ||||||| | | ||| ||||||||||| |||||||||||||| |||| |||||||||    
T  20900760 ggtcaacaaaaattgacgtatctggttcaaaatttggacaagatacatcaacttttgctgacccaaatgtctcttataaatagaacc 20900674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 41492946 - 41492896
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  41492946 atcaacttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 15896922 - 15896974
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  15896922 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 15896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 37666640 - 37666740
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||||| |||  |||||||||| ||||| ||||  || |||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  37666640 tttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 37666739  T
Q  124 a 124  Q
    |    
T  37666740 a 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 38917552 - 38917652
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| |||||| |||| | | |||| ||||| |||||||| |||    
T  38917552 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagt 38917651  T
Q  124 a 124  Q
    |    
T  38917652 a 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 4683979 - 4684062
Alignment:
Q  41 tgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| ||||    
T  4683979 tgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 15372306 - 15372357
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 125  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  15372306 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 15372357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 3055638 - 3055688
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  3055638 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 6648569 - 6648519
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  6648569 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 9047805 - 9047755
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  9047805 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 9047785 - 9047879
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  |||||| |||||| |||| ||| |||| ||||  |||||||    
T  9047785 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggag 9047879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 13197760 - 13197710
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  13197760 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 13197710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  66 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||| ||||||||||||||||| | |||||| || | ||||| |||||||||||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 37990063 - 37990013
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  37990063 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 38917572 - 38917522
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  38917572 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 41478689 - 41478639
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  41478689 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 44398766 - 44398816
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  44398766 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13952559 - 13952604
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttgg 64  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  13952559 aaacatttaggttaacaaaatatgatttatcttgttaagaatttgg 13952604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 14093766 - 14093811
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttgg 64  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14093766 aaacatttaggttaacaaaatatgatttatcttgttaagaatttgg 14093811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 14740572 - 14740487
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttat 104  Q
    ||||||||  |||||| |||| |||||||||| ||||| ||||||| | ||||| || | ||||||||||| ||||| ||| ||||    
T  14740572 aaacatttaagtcaactaaatgtgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaatatctcttat 14740487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 31150733 - 31150652
Alignment:
Q  44 tgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 125  Q
    ||||||| ||||| ||||| ||||||||| || ||||||||||||| ||| | ||| |||| ||||| | ||||| ||||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggagagagtaa 31150652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 12170430 - 12170530
Alignment:
Q  25 ttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||||||  |||||||| | ||||| ||||  ||||||||| || ||||||| |||||| || | ||| || | ||||| | |||||||||||    
T  12170430 ttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T
Q  125 a 125  Q
    |    
T  12170530 a 12170530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 30985768 - 30985808
Alignment:
Q  70 ataaatcaacttttgttgacccaaatgtcttttattaatag 110  Q
    ||||||||||||||||||||| |||||||| |||| |||||    
T  30985768 ataaatcaacttttgttgaccaaaatgtctgttataaatag 30985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 5e-16; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 47216729 - 47216832
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  47216729 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 47216828  T
Q  124 aata 127  Q
    ||||    
T  47216829 aata 47216832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 9981747 - 9981647
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  9981747 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 9981648  T
Q  124 a 124  Q
    |    
T  9981647 a 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 27159388 - 27159488
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  27159388 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 27159487  T
Q  124 a 124  Q
    |    
T  27159488 a 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 31842825 - 31842925
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  31842825 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 31842924  T
Q  124 a 124  Q
    |    
T  31842925 a 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 39401996 - 39402096
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  39401996 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 39402095  T
Q  124 a 124  Q
    |    
T  39402096 a 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 44668123 - 44668223
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  44668123 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 44668222  T
Q  124 a 124  Q
    |    
T  44668223 a 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 16448139 - 16448238
Alignment:
Q  25 ttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||||||  | |||||||| ||| | ||||  ||||| ||| |||||||||||||||||||| | ||| |||| ||||| |||||||||||||    
T  16448139 ttgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 14984937 - 14984843
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||    
T  14984937 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 14984843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 11897155 - 11897054
Alignment:
Q  23 atttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggag 122  Q
    ||||||||||||||||  |||||||||  ||||| ||||  || || ||| ||||||||||||||||| || | ||| |||| ||||| |||||||||||    
T  11897155 atttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggag 11897056  T
Q  123 ta 124  Q
    ||    
T  11897055 ta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 11796033 - 11795933
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||  ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  11796033 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 11795934  T
Q  124 a 124  Q
    |    
T  11795933 a 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 23278031 - 23278131
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  23278031 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagt 23278130  T
Q  124 a 124  Q
    |    
T  23278131 a 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 26471095 - 26471195
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||| |||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  26471095 tttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 26471194  T
Q  124 a 124  Q
    |    
T  26471195 a 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 34042796 - 34042696
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  | ||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  34042796 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagt 34042697  T
Q  124 a 124  Q
    |    
T  34042696 a 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 1050988 - 1050886
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||||| |||  |||||||||| ||||| ||||  ||||||||  ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  1050988 tttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 1050889  T
Q  124 aat 126  Q
    |||    
T  1050888 aat 1050886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 11897134 - 11897184
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  11897134 atcaacttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 11989853 - 11989915
Alignment:
Q  66 ccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaataa 128  Q
    ||||||| ||||| |||| ||||| ||||| |||||||| ||||| |||||||||||||||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagtaataa 11989915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 34042776 - 34042826
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| |||||||||||||||||||    
T  34042776 atcaacttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 44955240 - 44955338
Alignment:
Q  28 ggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| | | |||| ||||| |||||||| ||||||    
T  44955240 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtaat 44955338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 39402016 - 39401963
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaata 127  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||||    
T  39402016 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaata 39401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 12483684 - 12483628
Alignment:
Q  68 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 12483658 - 12483766
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||| | ||| | ||||  ||| ||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  12483658 tttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 12483757  T
Q  124 aataagtta 132  Q
    | |||||||    
T  12483758 attaagtta 12483766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 17556852 - 17556752
Alignment:
Q  25 ttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaata-aatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||||||||  |||||||||| ||||| ||||  ||||||||| | | |||||||||||||| || | ||| |||| ||||| ||| ||||||||    
T  17556852 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagt 17556753  T
Q  124 a 124  Q
    |    
T  17556752 a 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 31842845 - 31842793
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  31842845 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 31842793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 47777531 - 47777479
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||||    
T  47777531 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaat 47777479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 47777511 - 47777603
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccgg 116  Q
    |||||||||||||||  |||||||||| ||| | ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||    
T  47777511 tttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 47777603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 11796013 - 11796064
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 125  Q
    |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  11796013 atcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 11796064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 14984917 - 14984967
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  14984917 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 17556833 - 17556883
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||| | ||| |||| ||||| |||||||||||||    
T  17556833 atcaacttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 25694399 - 25694449
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  25694399 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 27159408 - 27159358
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  27159408 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 44668143 - 44668093
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  44668143 atcaacttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 47216749 - 47216699
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    |||||||||||||||||||||  ||| |||| ||||| |||||||||||||    
T  47216749 atcaacttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 47588367 - 47588452
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaata 109  Q
    |||||||||||||||  ||||||||||  |||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||    
T  47588367 tttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 47588452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 47969795 - 47969694
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtct-tttattaatagaaccggagggag 122  Q
    ||||| |||||||||  |||||||||| ||||| ||||  ||| ||||| ||  ||||||||||||| |||| ||| ||||| ||||| ||||||| |||    
T  47969795 tttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggagagag 47969696  T
Q  123 ta 124  Q
    ||    
T  47969695 ta 47969694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 26471115 - 26471063
Alignment:
Q  74 atcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaat 126  Q
    ||||||||||||||| |||||  ||| |||| ||||| |||||||||||||||    
T  26471115 atcaacttttgttgatccaaaattctcttataaataggaccggagggagtaat 26471063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 23885 - 23785
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  23885 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 23786  T
Q  124 a 124  Q
    |    
T  23785 a 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 12378 - 12480
Alignment:
Q  19 aaacatttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggag 118  Q
    |||||||  |||||||||||| |||||||||| ||||| ||||| | ||||| | | |||||||| |||||| |||| ||| |||| ||||| |||||||    
T  12378 aaacattcaggtcaacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggag 12477  T
Q  119 gga 121  Q
    |||    
T  12478 gga 12480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 1435 - 1342
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccgga 117  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| ||||||    
T  1435 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 1342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 12960 - 12860
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    ||||||||| |||||  |||||||||| ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  12960 tttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 12861  T
Q  124 a 124  Q
    |    
T  12860 a 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 6161 - 6261
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||||| ||||| ||||  ||||| ||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  6161 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 6260  T
Q  124 a 124  Q
    |    
T  6261 a 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 49605 - 49505
Alignment:
Q  24 tttgggtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagt 123  Q
    |||||||||||||||  |||||||| | ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||| ||||| |||||||| |||    
T  49605 tttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagt 49506  T
Q  124 a 124  Q
    |    
T  49505 a 49505  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 49579 - 49636
Alignment:
Q  68 aaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagtaa 125  Q
    ||||| |||||||||||||||||||||  ||| |||| ||||| ||||||||||||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtaa 49636  T

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Target: scaffold0650 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 20 - 114
Alignment:
Q  29 gtcaacaaaatatgatgtatcttgttaataatttggtccaaataaatcaacttttgttgacccaaatgtcttttattaatagaaccggagggagta 124  Q
    ||||||||||  |||||||| | ||||| ||||| ||||||||| ||||||||||||||||| |  | || | ||| |||||||||||||||||||    
T  20 gtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttc-tctataaatagaaccggagggagta 114  T

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