View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13940_low_24 (Length: 447)
Name: NF13940_low_24
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13940_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 20 - 432
Target Start/End: Original strand, 934151 - 934563
Alignment:
| Q |
20 |
tgagatgcttaacacaatgtattttcaaataaatatccttactggtactgttgtagaggtatatttttgttgtgcatgtttgcacatgaaagttgcagtt |
119 |
Q |
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| T |
934151 |
tgagatgcttaacacaatgtattttcaaataaatatccttgctggtactgttgtagaggtatatttttgttgtgcatgtttgcacatgaaagttgcagtt |
934250 |
T |
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| Q |
120 |
ctcatttccagaacatacacttgtaaaagctatctgagagttgataatgatgtatttatcttccatgctgcgatactgcaattaatgtctgaaattttga |
219 |
Q |
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| T |
934251 |
ctcatttccagaacatacacttgtaaaagctatctgagagttgataatgatgtatttatcttccatgctgcgatactgcaattaatgtctgaaattttga |
934350 |
T |
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| Q |
220 |
attaataacagtaaatttaattatcacaagcatccaggtcccggataccttggttgtattttgaaaaggaaaattttgaactatatctttgtatctaatt |
319 |
Q |
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| T |
934351 |
attaataacagtaaatttaattatcacaagcatccaggtcccggataccttggttgtattttgaaagggaaaattttgaactatatctttgtatctaatt |
934450 |
T |
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| Q |
320 |
tacatgcatacattatgaatttttataattttggcctgctcttatatgcagaacaaggatgaagatcttacacaatatcaggtagccaaggaagaattgc |
419 |
Q |
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| T |
934451 |
tacatgcatacattatgaatttttataattttggcctgctcttatatgcagaacaaggatgaagatcttacacaatatcaggtagccaaggaagaattgc |
934550 |
T |
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| Q |
420 |
atgaggatgatgt |
432 |
Q |
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| T |
934551 |
atgaggatgatgt |
934563 |
T |
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