View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13940_low_63 (Length: 260)
Name: NF13940_low_63
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13940_low_63 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 38793457 - 38793222
Alignment:
| Q |
8 |
agattattctgcatgattggttaaataaaaataacgggattatccaacaattaaattttaaattatataaaatattagtattttattattgggtaaaggg |
107 |
Q |
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| T |
38793457 |
agattattctgcatgattggttaaataaatataacgggattatccaacaattaaattttaaattatataaaatattagtattttattattgggtaaaggg |
38793358 |
T |
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| Q |
108 |
ttgtactattgtataagaagataccaaggggtccgtccaatacaatggtgaagaataaaatggaggacacttcaaaaatgaagcaaagacaaagagaagt |
207 |
Q |
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| T |
38793357 |
ttgtactattgtataagaagataccaaggggtccgtccaatacaatggtgaagaataaaatggaggacacttcaaaaatgaagcaaagacaaagagaagt |
38793258 |
T |
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| Q |
208 |
aatgttggaatttagaacacctcaacacccatcttt |
243 |
Q |
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| T |
38793257 |
aatgttggaatttagaacacctcaacacccatcttt |
38793222 |
T |
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