View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13940_low_74 (Length: 230)
Name: NF13940_low_74
Description: NF13940
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13940_low_74 |
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Alignment Details
Target: chr1 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 13272221 - 13272026
Alignment:
| Q |
16 |
agaagaatagtgtagctcaagaaaatattcatcaattcttgttcaaaatgataatgcattcaaaatatgatgatgataaaagtagattaaaaaccaatga |
115 |
Q |
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| T |
13272221 |
agaagaacagtatagctcaaaaaaatattcatcaattcttgttcaaaatgataatgcattcgaaatatgatgaaaataaaagtagattaaaaaccagtga |
13272122 |
T |
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| Q |
116 |
agatgttgcggaaattcaacctgttggcatgttaaaagcactaatgaaagaaggattgggaaaggaagaaatgaatgaaaatgaaaagtatattag |
211 |
Q |
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| T |
13272121 |
agatgttgctgaaattcatcctgttggtgtgttaaaaccactaatgaaggaaggcttgggaaaggaagaaacgaatgaaaatgaaaagtatattag |
13272026 |
T |
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