View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13943_low_26 (Length: 360)

Name: NF13943_low_26
Description: NF13943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13943_low_26
NF13943_low_26
[»] chr5 (41 HSPs)
chr5 (19-129)||(1538254-1538363)
chr5 (124-192)||(6497515-6497583)
chr5 (129-192)||(22394121-22394184)
chr5 (129-192)||(24490841-24490904)
chr5 (126-192)||(14868995-14869061)
chr5 (130-192)||(3598736-3598798)
chr5 (130-192)||(43196899-43196961)
chr5 (130-191)||(4122577-4122638)
chr5 (132-192)||(3598413-3598473)
chr5 (129-192)||(6542256-6542319)
chr5 (133-192)||(25329098-25329157)
chr5 (294-344)||(19182394-19182444)
chr5 (128-185)||(5933121-5933178)
chr5 (124-192)||(24491166-24491234)
chr5 (257-299)||(5933250-5933292)
chr5 (257-299)||(7133341-7133383)
chr5 (130-192)||(10461343-10461405)
chr5 (257-299)||(14868889-14868931)
chr5 (257-299)||(18786106-18786148)
chr5 (257-299)||(24490968-24491010)
chr5 (128-192)||(18786303-18786367)
chr5 (264-299)||(4122709-4122744)
chr5 (257-299)||(3598629-3598671)
chr5 (257-299)||(6497408-6497450)
chr5 (257-299)||(6542384-6542426)
chr5 (257-299)||(10461470-10461512)
chr5 (257-299)||(25329222-25329264)
chr5 (257-299)||(41137357-41137399)
chr5 (128-181)||(41137474-41137527)
chr5 (130-178)||(7133465-7133513)
chr5 (267-299)||(7586249-7586281)
chr5 (294-342)||(29736198-29736246)
chr5 (257-297)||(29991320-29991360)
chr5 (129-192)||(10461668-10461731)
chr5 (125-192)||(15969753-15969815)
chr5 (129-192)||(43197224-43197287)
chr5 (294-344)||(3169086-3169136)
chr5 (257-299)||(22394249-22394291)
chr5 (294-344)||(34311726-34311776)
chr5 (257-299)||(43197026-43197068)
chr5 (130-191)||(6542582-6542643)
[»] chr6 (44 HSPs)
chr6 (127-192)||(9571719-9571784)
chr6 (124-192)||(17238357-17238425)
chr6 (129-192)||(30608863-30608926)
chr6 (130-192)||(8926512-8926574)
chr6 (130-192)||(8936769-8936831)
chr6 (124-192)||(5924151-5924219)
chr6 (129-192)||(5404893-5404956)
chr6 (129-192)||(5409218-5409281)
chr6 (129-192)||(26272303-26272366)
chr6 (130-192)||(19661348-19661410)
chr6 (127-192)||(3485097-3485162)
chr6 (128-192)||(28853808-28853872)
chr6 (130-192)||(16525516-16525578)
chr6 (131-192)||(3345019-3345080)
chr6 (257-299)||(8926403-8926445)
chr6 (257-299)||(8936660-8936702)
chr6 (257-299)||(18502723-18502765)
chr6 (257-299)||(26272196-26272238)
chr6 (257-299)||(30608991-30609033)
chr6 (257-299)||(31717391-31717433)
chr6 (124-185)||(29819407-29819468)
chr6 (128-192)||(3345342-3345406)
chr6 (132-184)||(5140690-5140742)
chr6 (259-299)||(16525409-16525449)
chr6 (264-299)||(3345152-3345187)
chr6 (257-299)||(5404786-5404828)
chr6 (257-299)||(5924043-5924085)
chr6 (257-299)||(17238250-17238292)
chr6 (130-192)||(30609189-30609251)
chr6 (128-185)||(31717476-31717534)
chr6 (130-192)||(33783394-33783456)
chr6 (131-192)||(8926186-8926247)
chr6 (131-192)||(8936443-8936504)
chr6 (128-192)||(5404596-5404660)
chr6 (130-190)||(17238030-17238090)
chr6 (124-192)||(19661672-19661740)
chr6 (264-299)||(19661481-19661516)
chr6 (129-192)||(31717172-31717235)
chr6 (258-297)||(33783523-33783562)
chr6 (257-299)||(28853701-28853743)
chr6 (257-299)||(29819602-29819644)
chr6 (131-192)||(3484782-3484843)
chr6 (266-299)||(4601169-4601202)
chr6 (131-192)||(5923825-5923886)
[»] chr2 (56 HSPs)
chr2 (123-192)||(18369004-18369073)
chr2 (129-192)||(2395480-2395543)
chr2 (123-192)||(28921516-28921585)
chr2 (129-190)||(30432593-30432654)
chr2 (128-192)||(33940677-33940741)
chr2 (133-192)||(14379114-14379173)
chr2 (129-192)||(30432918-30432981)
chr2 (131-192)||(10748493-10748554)
chr2 (131-192)||(29683497-29683558)
chr2 (131-192)||(41594274-41594335)
chr2 (127-192)||(42705275-42705340)
chr2 (129-192)||(12806872-12806935)
chr2 (127-192)||(3948359-3948424)
chr2 (128-192)||(4171848-4171912)
chr2 (128-192)||(29683172-29683236)
chr2 (130-185)||(6880000-6880055)
chr2 (129-188)||(13278119-13278178)
chr2 (129-192)||(13572469-13572532)
chr2 (129-192)||(19204916-19204979)
chr2 (133-192)||(41593952-41594011)
chr2 (257-299)||(2395373-2395415)
chr2 (257-299)||(3948489-3948531)
chr2 (257-299)||(7877449-7877491)
chr2 (257-299)||(10748619-10748661)
chr2 (257-299)||(13572687-13572729)
chr2 (257-299)||(18369138-18369180)
chr2 (257-299)||(28921409-28921451)
chr2 (257-299)||(30432720-30432762)
chr2 (258-299)||(37609082-37609123)
chr2 (124-192)||(32521799-32521866)
chr2 (259-299)||(42705168-42705208)
chr2 (133-192)||(13572794-13572853)
chr2 (129-192)||(37608954-37609016)
chr2 (257-299)||(3371518-3371560)
chr2 (257-299)||(12806765-12806807)
chr2 (257-299)||(14379238-14379280)
chr2 (294-344)||(16212713-16212763)
chr2 (257-299)||(17457843-17457885)
chr2 (257-299)||(29683390-29683432)
chr2 (130-191)||(17457716-17457777)
chr2 (259-299)||(4171741-4171781)
chr2 (132-192)||(7877323-7877383)
chr2 (128-192)||(7877648-7877712)
chr2 (305-344)||(28401123-28401162)
chr2 (129-192)||(37609278-37609341)
chr2 (264-299)||(41594083-41594118)
chr2 (126-192)||(2395151-2395217)
chr2 (130-192)||(3371625-3371687)
chr2 (294-344)||(3952832-3952882)
chr2 (257-299)||(6164023-6164065)
chr2 (294-344)||(16084126-16084176)
chr2 (265-299)||(25318449-25318483)
chr2 (130-192)||(25318617-25318679)
chr2 (131-192)||(14379436-14379497)
chr2 (132-192)||(3371302-3371362)
chr2 (131-191)||(38873473-38873533)
[»] scaffold0006 (3 HSPs)
scaffold0006 (128-192)||(212408-212472)
scaffold0006 (257-299)||(212537-212579)
scaffold0006 (129-192)||(212735-212798)
[»] chr8 (38 HSPs)
chr8 (128-192)||(2835416-2835480)
chr8 (127-192)||(18764280-18764345)
chr8 (128-192)||(6943980-6944044)
chr8 (133-189)||(31186670-31186726)
chr8 (133-188)||(24332585-24332640)
chr8 (129-192)||(31402909-31402972)
chr8 (130-192)||(3273043-3273105)
chr8 (131-192)||(6892071-6892132)
chr8 (130-191)||(26479324-26479385)
chr8 (131-192)||(13154562-13154623)
chr8 (132-192)||(9180368-9180428)
chr8 (257-299)||(6943873-6943915)
chr8 (127-185)||(31685972-31686030)
chr8 (258-299)||(13154455-13154496)
chr8 (258-299)||(18764411-18764452)
chr8 (259-299)||(13405664-13405704)
chr8 (129-192)||(6943654-6943717)
chr8 (264-299)||(31403045-31403080)
chr8 (257-299)||(3272936-3272978)
chr8 (257-299)||(6891994-6892036)
chr8 (257-299)||(24332478-24332520)
chr8 (130-192)||(31186372-31186434)
chr8 (257-299)||(31186589-31186631)
chr8 (128-192)||(220509-220573)
chr8 (128-192)||(689664-689728)
chr8 (128-192)||(734132-734196)
chr8 (128-192)||(858028-858092)
chr8 (128-192)||(13154235-13154299)
chr8 (264-299)||(220728-220763)
chr8 (264-299)||(689883-689918)
chr8 (264-299)||(734351-734386)
chr8 (264-299)||(858247-858282)
chr8 (129-192)||(3272746-3272809)
chr8 (133-192)||(13405771-13405830)
chr8 (130-189)||(18764611-18764670)
chr8 (257-299)||(9180261-9180303)
chr8 (130-191)||(26479618-26479679)
chr8 (130-192)||(20112424-20112482)
[»] chr1 (42 HSPs)
chr1 (127-191)||(50625088-50625152)
chr1 (129-192)||(20061795-20061858)
chr1 (129-192)||(28031970-28032033)
chr1 (131-192)||(43191655-43191716)
chr1 (124-184)||(14602339-14602399)
chr1 (128-192)||(26244545-26244609)
chr1 (129-192)||(37172245-37172308)
chr1 (131-192)||(39027480-39027541)
chr1 (131-192)||(50096132-50096193)
chr1 (129-192)||(42155072-42155135)
chr1 (131-192)||(12322416-12322478)
chr1 (127-192)||(26244872-26244937)
chr1 (128-192)||(33880-33944)
chr1 (128-192)||(39288148-39288212)
chr1 (128-188)||(47829287-47829347)
chr1 (257-299)||(14602226-14602268)
chr1 (257-299)||(28031863-28031905)
chr1 (130-192)||(50096456-50096518)
chr1 (125-182)||(28031640-28031697)
chr1 (128-192)||(33553-33617)
chr1 (259-299)||(20061925-20061965)
chr1 (259-299)||(37172375-37172415)
chr1 (129-192)||(12322089-12322152)
chr1 (129-192)||(20062121-20062184)
chr1 (264-299)||(26244765-26244800)
chr1 (264-299)||(33619028-33619063)
chr1 (257-299)||(33773-33815)
chr1 (257-299)||(10913990-10914032)
chr1 (257-299)||(12322308-12322350)
chr1 (265-299)||(42154966-42155000)
chr1 (257-299)||(43191781-43191823)
chr1 (257-299)||(47829178-47829220)
chr1 (257-299)||(50096349-50096391)
chr1 (129-182)||(39027678-39027731)
chr1 (294-343)||(43510352-43510401)
chr1 (128-192)||(14602006-14602070)
chr1 (264-299)||(50624982-50625017)
chr1 (257-299)||(39288279-39288321)
chr1 (257-298)||(7337062-7337103)
chr1 (130-171)||(51999451-51999492)
chr1 (128-192)||(33619219-33619283)
chr1 (140-192)||(39288478-39288530)
[»] scaffold0817 (2 HSPs)
scaffold0817 (129-192)||(4305-4368)
scaffold0817 (129-192)||(3980-4043)
[»] scaffold0147 (3 HSPs)
scaffold0147 (129-192)||(25459-25522)
scaffold0147 (257-299)||(25327-25369)
scaffold0147 (129-192)||(25120-25183)
[»] chr7 (39 HSPs)
chr7 (129-192)||(19158016-19158079)
chr7 (129-192)||(20757415-20757478)
chr7 (130-192)||(24354-24416)
chr7 (127-192)||(44219289-44219354)
chr7 (132-192)||(42517190-42517250)
chr7 (128-192)||(44483549-44483613)
chr7 (129-192)||(40729386-40729449)
chr7 (127-188)||(830006-830067)
chr7 (127-188)||(1195186-1195247)
chr7 (131-188)||(22364656-22364713)
chr7 (132-192)||(13426325-13426385)
chr7 (132-192)||(34595318-34595379)
chr7 (130-192)||(13426615-13426677)
chr7 (131-192)||(19476718-19476780)
chr7 (130-192)||(34595642-34595704)
chr7 (130-192)||(35026443-35026505)
chr7 (257-299)||(35026660-35026702)
chr7 (257-299)||(42517083-42517125)
chr7 (257-299)||(44219419-44219461)
chr7 (257-299)||(44483442-44483484)
chr7 (258-299)||(31579557-31579598)
chr7 (259-299)||(24483-24523)
chr7 (259-299)||(19476610-19476650)
chr7 (128-192)||(44483225-44483289)
chr7 (129-192)||(35026767-35026829)
chr7 (257-299)||(22364778-22364820)
chr7 (257-299)||(22954465-22954507)
chr7 (257-299)||(34487358-34487400)
chr7 (257-299)||(34595444-34595486)
chr7 (257-299)||(40729279-40729321)
chr7 (131-192)||(42516866-42516927)
chr7 (129-185)||(40729089-40729145)
chr7 (294-344)||(8770962-8771013)
chr7 (264-299)||(19157909-19157944)
chr7 (264-299)||(20757308-20757343)
chr7 (129-192)||(44219617-44219680)
chr7 (126-192)||(19476387-19476453)
chr7 (266-299)||(23177263-23177296)
chr7 (294-342)||(40017152-40017200)
[»] chr4 (56 HSPs)
chr4 (130-192)||(16959761-16959823)
chr4 (130-192)||(17865299-17865361)
chr4 (129-192)||(4712500-4712563)
chr4 (129-192)||(37815665-37815728)
chr4 (133-192)||(42239396-42239455)
chr4 (127-188)||(22487545-22487606)
chr4 (130-190)||(26314474-26314534)
chr4 (129-192)||(16491969-16492032)
chr4 (130-192)||(13492882-13492944)
chr4 (129-181)||(17107765-17107817)
chr4 (127-192)||(13682999-13683064)
chr4 (124-192)||(5720945-5721013)
chr4 (140-192)||(13683320-13683372)
chr4 (129-192)||(989398-989461)
chr4 (133-192)||(32592744-32592803)
chr4 (127-182)||(46481250-46481305)
chr4 (257-299)||(16959889-16959931)
chr4 (257-299)||(22487436-22487478)
chr4 (257-299)||(32592868-32592910)
chr4 (257-299)||(37815557-37815599)
chr4 (130-192)||(46081424-46081486)
chr4 (257-299)||(46481133-46481175)
chr4 (129-182)||(2184421-2184474)
chr4 (133-192)||(989078-989137)
chr4 (259-299)||(4712394-4712434)
chr4 (128-192)||(16960087-16960151)
chr4 (259-299)||(17865192-17865232)
chr4 (124-192)||(39385174-39385242)
chr4 (264-299)||(11021889-11021924)
chr4 (257-299)||(989200-989242)
chr4 (130-192)||(11021671-11021733)
chr4 (126-192)||(12792566-12792632)
chr4 (257-299)||(13683220-13683262)
chr4 (257-299)||(16491863-16491905)
chr4 (257-299)||(17107648-17107690)
chr4 (257-299)||(43750163-43750205)
chr4 (131-181)||(43750279-43750329)
chr4 (294-343)||(46639551-46639601)
chr4 (259-299)||(13493011-13493051)
chr4 (128-192)||(22487216-22487280)
chr4 (257-297)||(26314600-26314640)
chr4 (259-298)||(12792699-12792738)
chr4 (129-192)||(16491644-16491707)
chr4 (129-192)||(17107429-17107492)
chr4 (264-299)||(20046018-20046053)
chr4 (129-184)||(46480943-46480998)
chr4 (257-299)||(5721168-5721210)
chr4 (257-299)||(9301695-9301737)
chr4 (130-192)||(37815339-37815401)
chr4 (132-178)||(46081711-46081757)
chr4 (294-344)||(55223179-55223229)
chr4 (127-180)||(4712174-4712227)
chr4 (258-299)||(39385287-39385328)
chr4 (257-297)||(2184519-2184559)
chr4 (128-192)||(11021996-11022060)
chr4 (128-192)||(17864943-17865007)
[»] chr3 (48 HSPs)
chr3 (124-191)||(33162316-33162382)
chr3 (129-192)||(50645795-50645858)
chr3 (129-191)||(46962579-46962641)
chr3 (127-192)||(32315371-32315436)
chr3 (124-192)||(49500166-49500234)
chr3 (129-192)||(17109848-17109911)
chr3 (129-192)||(27934774-27934837)
chr3 (127-192)||(29838289-29838354)
chr3 (128-192)||(33162643-33162707)
chr3 (129-192)||(55092530-55092593)
chr3 (128-190)||(14545831-14545893)
chr3 (131-192)||(32315698-32315759)
chr3 (131-192)||(38807861-38807922)
chr3 (140-192)||(26582621-26582673)
chr3 (132-192)||(26582935-26582995)
chr3 (129-192)||(42093392-42093455)
chr3 (257-299)||(17109976-17110018)
chr3 (257-299)||(33162445-33162487)
chr3 (257-299)||(42093520-42093562)
chr3 (257-299)||(50645688-50645730)
chr3 (257-299)||(52835761-52835803)
chr3 (130-192)||(52835869-52835930)
chr3 (132-192)||(14546159-14546219)
chr3 (127-182)||(17109742-17109797)
chr3 (129-192)||(27934448-27934511)
chr3 (294-344)||(45683703-45683754)
chr3 (257-299)||(889253-889295)
chr3 (257-299)||(26582737-26582779)
chr3 (257-299)||(29838419-29838461)
chr3 (257-299)||(32315501-32315543)
chr3 (266-299)||(38807754-38807787)
chr3 (128-192)||(46962905-46962969)
chr3 (259-299)||(49500059-49500099)
chr3 (268-299)||(7029601-7029632)
chr3 (264-299)||(27285185-27285220)
chr3 (264-299)||(49121932-49121967)
chr3 (129-192)||(55092202-55092265)
chr3 (264-299)||(55092423-55092458)
chr3 (257-299)||(14545961-14546003)
chr3 (130-192)||(27284968-27285030)
chr3 (257-299)||(27934667-27934709)
chr3 (126-192)||(29838617-29838683)
chr3 (130-192)||(52835543-52835605)
chr3 (127-192)||(16056344-16056409)
chr3 (131-192)||(49121714-49121775)
chr3 (300-344)||(17605390-17605432)
chr3 (294-330)||(20823058-20823094)
chr3 (128-192)||(49499839-49499903)
[»] scaffold0137 (3 HSPs)
scaffold0137 (128-185)||(36763-36820)
scaffold0137 (257-299)||(36890-36932)
scaffold0137 (129-192)||(37058-37121)
[»] scaffold0103 (2 HSPs)
scaffold0103 (129-192)||(43274-43337)
scaffold0103 (264-299)||(43409-43444)
[»] scaffold0126 (3 HSPs)
scaffold0126 (129-190)||(36318-36379)
scaffold0126 (257-299)||(36119-36161)
scaffold0126 (133-177)||(35995-36039)
[»] scaffold0045 (2 HSPs)
scaffold0045 (132-189)||(43994-44051)
scaffold0045 (128-192)||(43906-43970)
[»] scaffold0170 (2 HSPs)
scaffold0170 (130-192)||(8539-8602)
scaffold0170 (257-299)||(8667-8709)
[»] scaffold0167 (2 HSPs)
scaffold0167 (257-299)||(4512-4554)
scaffold0167 (130-189)||(4713-4772)
[»] scaffold0028 (2 HSPs)
scaffold0028 (257-299)||(74130-74172)
scaffold0028 (133-176)||(74252-74295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (130-192)||(118355-118416)


Alignment Details
Target: chr5 (Bit Score: 99; Significance: 8e-49; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 1538254 - 1538363
Alignment:
Q  19 actttattattgtattccgagcaattgcaccagtttggccagtttctttcaaacttatgtctatacttgtaccaacagaaaaaaccttatgtaaatgcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1538254 actttattattgtattccgagcaattgcaccagtttggccaatttctttcaaacttatgtctatacttgtaccaaca-aaaaaaccttatgtaaatgcaa 1538352  T
Q  119 ggaacaaaata 129  Q
    |||||||||||    
T  1538353 ggaacaaaata 1538363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 6497583 - 6497515
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  6497583 aaaataggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaat 6497515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 22394121 - 22394184
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  22394121 aggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaat 22394184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 24490841 - 24490904
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  24490841 aggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 24490904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 14869061 - 14868995
Alignment:
Q  126 aataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  14869061 aataggtttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaat 14868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 3598798 - 3598736
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  3598798 ggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaat 3598736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 43196899 - 43196961
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||    
T  43196899 ggcttaaatatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaat 43196961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 4122577 - 4122638
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    ||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  4122577 ggcttaaatatgaaaatagtccctgcaaatatttgacattttgattttagtccctgtaaaaa 4122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 3598413 - 3598473
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||    
T  3598413 cttaaatatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaat 3598473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 6542256 - 6542319
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| || ||||||||||||||| ||||| |||||||||| |||||||||    
T  6542256 aggcttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaaat 6542319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 25329098 - 25329157
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||    
T  25329098 ttaaatatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaaat 25329157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 19182394 - 19182444
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  19182394 tgtaatctctgtttgttgtgttcttaaactcttgtaatttttagtggtatc 19182444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 5933121 - 5933178
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||||    
T  5933121 taggcttaaatatgaaaattgtccctgcaaatatgtgacattttggttttagtccctg 5933178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 24491234 - 24491166
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||| |||| ||||| ||||  |||||||||||| ||||||||||||||||||||    
T  24491234 aaaaaaggcttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaat 24491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 5933250 - 5933292
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  5933250 agtccttgtaaaattgattcatattggatttggtccttgtaat 5933292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 7133383 - 7133341
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  7133383 agtccttgtaaaattgattcatattggatttggtccttgtaat 7133341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 10461343 - 10461405
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||||||| | |||||| |||||||||  |||||||||    
T  10461343 ggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtctttgtaaaaat 10461405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 14868931 - 14868889
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14868931 agtccttgtaaaattgattcatattggatttggtccttgtaat 14868889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 18786106 - 18786148
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18786106 agtccttgtaaaattgattcatattggatttggtccttgtaat 18786148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 24490968 - 24491010
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  24490968 agtccttgtaaaattgattcatattggatttggtccttgtaat 24491010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 18786367 - 18786303
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||| |||| ||||| ||||||||||| | |||| ||||||||||||||||||||    
T  18786367 taggtttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaat 18786303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 4122709 - 4122744
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  4122709 gtaaaattgattcatattggatttggtccttgtaat 4122744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 3598671 - 3598629
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  3598671 agtccttgtaaaattgattcatattggatttgatccttgtaat 3598629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 6497450 - 6497408
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  6497450 agtccttgtaaaattaattcatattggatttggtccttgtaat 6497408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 6542384 - 6542426
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  6542384 agtccttgtaaaattgatttatattggatttggtccttgtaat 6542426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 10461470 - 10461512
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  10461470 agtccttgtaaaattgatttatattggatttggtccttgtaat 10461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 25329222 - 25329264
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  25329222 agtccttgtaaaattgattcatattggatttgatccttgtaat 25329264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 41137399 - 41137357
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  41137399 agtccttgtaaaattgattcatattggatttggttcttgtaat 41137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 41137527 - 41137474
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtc 181  Q
    |||| |||||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  41137527 taggtttaaatatgaaaatagtccctgcaaatatttgatatttttgttttagtc 41137474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 7133513 - 7133465
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagtttta 178  Q
    ||||||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  7133513 ggcttaaatgtgaaaatagtctccgcaaatatctgatattttggtttta 7133465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 299
Target Start/End: Complemental strand, 7586281 - 7586249
Alignment:
Q  267 aaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||||||||    
T  7586281 aaattgattcatattggatttggtccttgtaat 7586249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 29736198 - 29736246
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggta 342  Q
    |||||| ||| |||||||||||||||||||||||||  |||||||||||    
T  29736198 tgtaatatctctttgttgtgttcttaaactcttgtaatttttagtggta 29736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 29991360 - 29991320
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgta 297  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  29991360 agtccttgtaaaattgattcatattggaattggtccttgta 29991320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 10461731 - 10461668
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||| | ||||  ||||||||||| |||||||    
T  10461731 aggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaat 10461668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 15969815 - 15969753
Alignment:
Q  125 aaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| ||||||||||||| ||||||     |||||||  |||||||||||||||||||    
T  15969815 aaataggcttaaatgtgaaaatagtccctgcaaat-----acattttgattttagtccctgtaaaaat 15969753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 43197287 - 43197224
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| |||||||||||   |||| |||||||||||| |||||||    
T  43197287 aggcttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaat 43197224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 3169086 - 3169136
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||| |||||||||||||||||||||| ||||||  | |||||||||||    
T  3169086 tgtaatatctgtttgttgtgttcttaaacccttgtaattcttagtggtatc 3169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 22394249 - 22394291
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||| | |||||||||||||||||||||||||||    
T  22394249 agtccttgtaaaagtaattcatattggatttggtccttgtaat 22394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 34311776 - 34311726
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||| ||||||||||||| || | |||||||||| ||||||||||||||    
T  34311776 tgtaatatctgtttgttgtgatcattaactcttgtaacttttagtggtatc 34311726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 43197026 - 43197068
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| ||||||||| |||||||    
T  43197026 agtccttgtaaaattgattcatattcgatttggtctttgtaat 43197068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 6542643 - 6542582
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    |||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| ||||||    
T  6542643 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaa 6542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 9571784 - 9571719
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  9571784 ataggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaat 9571719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 17238425 - 17238357
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  17238425 aaaaaaggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 17238357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 30608863 - 30608926
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  30608863 aggcttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaat 30608926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 8926574 - 8926512
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  8926574 ggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaat 8926512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 8936831 - 8936769
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  8936831 ggcttaaatatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaat 8936769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 5924219 - 5924151
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||| |||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  5924219 aaaaaaggtttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaat 5924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 5404956 - 5404893
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||||    
T  5404956 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaat 5404893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 5409281 - 5409218
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||| || |||||||    
T  5409281 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctctataaaaat 5409218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 26272366 - 26272303
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||| |||||||    
T  26272366 aggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaat 26272303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 19661348 - 19661410
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||    
T  19661348 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaat 19661410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 3485162 - 3485097
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  3485162 ataggcttaaatgtgaaaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaat 3485097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 28853872 - 28853808
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| ||||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  28853872 taggcttaaacatgaaaatagtccctacaaatatctgacattttggttttagtccctataaaaat 28853808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 16525578 - 16525516
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| ||| |||||||||||||||||||| | |||||||| |||||||||    
T  16525578 ggcttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaaat 16525516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 3345019 - 3345080
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||| ||| |||||||| ||||| |||||||||| |||||||||    
T  3345019 gcttaaatatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaat 3345080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 8926445 - 8926403
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  8926445 agtccttgtaaaattgattcatattggatttggtccttgtaat 8926403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 8936702 - 8936660
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  8936702 agtccttgtaaaattgattcatattggatttggtccttgtaat 8936660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 18502723 - 18502765
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18502723 agtccttgtaaaattgattcatattggatttggtccttgtaat 18502765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 26272238 - 26272196
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  26272238 agtccttgtaaaattgattcatattggatttggtccttgtaat 26272196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 30608991 - 30609033
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  30608991 agtccttgtaaaattgattcatattggatttggtccttgtaat 30609033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 31717433 - 31717391
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  31717433 agtccttgtaaaattgattcatattggatttggtccttgtaat 31717391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 29819407 - 29819468
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    |||||||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||||    
T  29819407 aaaataggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctg 29819468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 3345406 - 3345342
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  3345406 taggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 3345342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 5140690 - 5140742
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccct 184  Q
    |||||||||| |||| ||||| |||||||||||||||||| ||||||||||||    
T  5140690 cttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccct 5140742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 16525449 - 16525409
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  16525449 tccttgtaaaattgattcatattggatttggtccttgtaat 16525409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 3345152 - 3345187
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  3345152 gtaaaattgattcatattggatttggtccttgtaat 3345187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 5404828 - 5404786
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  5404828 agtccttgtaaaattgattcatattggattcggtccttgtaat 5404786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 5924085 - 5924043
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  5924085 agtccttgtaaaattgattcataatggatttggtccttgtaat 5924043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 17238292 - 17238250
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  17238292 agtccttgtaaaattgattcatattgaatttggtccttgtaat 17238250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 30609251 - 30609189
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| ||||| |||||||||||   |||| |||||||||||| |||||||    
T  30609251 ggcttaaatatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaat 30609189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 31717534 - 31717476
Alignment:
Q  128 taggcttaaatatgaaaa-tagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||| |||||||||||||    
T  31717534 taggcttaaatgtgaaaaatagtccctgcaaatatctgaaattttggttttagtccctg 31717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 33783394 - 33783456
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||||||| |||||||||||| ||||| |||| | | |||||||||||    
T  33783394 ggcttaaatatgaagatagtccctgcaaatatctgatattttggtttcaattcctgtaaaaat 33783456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 8926186 - 8926247
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||| |||||||||||| || |||| |||||||||||| |||||||    
T  8926186 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaat 8926247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 8936443 - 8936504
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||| |||||||||||| || |||| |||||||||||| |||||||    
T  8936443 gcttaaatatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaat 8936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 5404596 - 5404660
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||| |||| ||||| ||||||||||| ||||||  ||||||||||| |||||||    
T  5404596 taggtttaaatatggaaatggtccctgcaaatatctggcattttgattttagtccctataaaaat 5404660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 17238030 - 17238090
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaa 190  Q
    |||||||||||| ||||  |||| |||||||||||| ||||| ||||||||||||| ||||    
T  17238030 ggcttaaatatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaa 17238090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 19661740 - 19661672
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||| |||| ||||  ||||||||||| | |||| |||||||||||| |||||||    
T  19661740 aaaaaaggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaat 19661672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 19661481 - 19661516
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19661481 gtaaaattgattcatattgaatttggtccttgtaat 19661516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 31717172 - 31717235
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| |||||||| |||| |||| |||||| ||||| |||||||    
T  31717172 aggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaat 31717235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 33783523 - 33783562
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgta 297  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  33783523 gtccttgtaaaattgattcatattgaatttggtccttgta 33783562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 28853743 - 28853701
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  28853743 agtccttgtaaaattgattcatattagatttggttcttgtaat 28853701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 29819644 - 29819602
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||  |||||||||||||||||||||||||    
T  29819644 agtccttgtaaaattggatcatattggatttggtccttgtaat 29819602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 3484782 - 3484843
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| ||||  |||| |||||||||| ||||||| |||||||||  |||||||||    
T  3484782 gcttaaatatggaaatgatccctgcaaatatctaacattttggttttagtctgtgtaaaaat 3484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 4601202 - 4601169
Alignment:
Q  266 aaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||| |||||||||||||    
T  4601202 aaaattgattcatattggatatggtccttgtaat 4601169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 5923825 - 5923886
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| ||||||||||  | |||| |||||||||||| |||||||    
T  5923825 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaat 5923886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 18369004 - 18369073
Alignment:
Q  123 caaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  18369004 caaaaaaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 18369073  T

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Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 2395543 - 2395480
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2395543 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 2395480  T

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Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 192
Target Start/End: Complemental strand, 28921585 - 28921516
Alignment:
Q  123 caaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||    
T  28921585 caaaaaaggcttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaat 28921516  T

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Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 30432593 - 30432654
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaa 190  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30432593 aggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 30432654  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 33940677 - 33940741
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||    
T  33940677 taggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaat 33940741  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 14379114 - 14379173
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  14379114 ttaaatatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaat 14379173  T

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Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 30432981 - 30432918
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  30432981 aggcttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaat 30432918  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 10748493 - 10748554
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  10748493 gcttaaatatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaat 10748554  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 29683558 - 29683497
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  29683558 gcttaaatatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaat 29683497  T

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Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 41594335 - 41594274
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  41594335 gcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaat 41594274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 42705340 - 42705275
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||||    
T  42705340 atagacttaaatatgaaaatagtccctgcaaatatctgacattttggatttagtctctgtaaaaat 42705275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 12806935 - 12806872
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||||||||| ||||||||    
T  12806935 aggcttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaat 12806872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 3948359 - 3948424
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||||| ||||||||||| |||||||    
T  3948359 atagacttaaatatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaat 3948424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 4171912 - 4171848
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| ||||||||| | ||||||||    
T  4171912 taggtttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctcggtaaaaat 4171848  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 29683172 - 29683236
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  29683172 taggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 29683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 6880000 - 6880055
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||    
T  6880000 ggcttaaatatgaaaattgtccctacaaatatctgacattttggttttagtccctg 6880055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 13278178 - 13278119
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||||||| ||||||||| | |||||||| |||||||||||||||||| |||||||    
T  13278178 aggcttaaatataaaaatagtctctgcaaatatttgacattttagttttagttcctgtaa 13278119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 13572469 - 13572532
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||| | ||||||||||||||||| |||||||    
T  13572469 aggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaat 13572532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 19204979 - 19204916
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| | ||||||| | |||||| |||||||||| |||||||||    
T  19204979 aggcttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaaat 19204916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 41593952 - 41594011
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||| |||||||||| || |||||||||||| ||||| ||||||||||||||||||||    
T  41593952 ttaaatgtgaaaatagttcctgcaaatatctgatattttggttttagtccctgtaaaaat 41594011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 2395415 - 2395373
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  2395415 agtccttgtaaaattgattcatattggatttggtccttgtaat 2395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 3948489 - 3948531
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  3948489 agtccttgtaaaattgattcatattggatttggtccttgtaat 3948531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 7877449 - 7877491
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  7877449 agtccttgtaaaattgattcatattggatttggtccttgtaat 7877491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 10748619 - 10748661
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  10748619 agtccttgtaaaattgattcatattggatttggtccttgtaat 10748661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 13572729 - 13572687
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  13572729 agtccttgtaaaattgattcatattggatttggtccttgtaat 13572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 18369138 - 18369180
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18369138 agtccttgtaaaattgattcatattggatttggtccttgtaat 18369180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 28921451 - 28921409
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  28921451 agtccttgtaaaattgattcatattggatttggtccttgtaat 28921409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 30432720 - 30432762
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  30432720 agtccttgtaaaattgattcatattggatttggtccttgtaat 30432762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 37609082 - 37609123
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  37609082 gtccttgtaaaattgattcatattggatttggtccttgtaat 37609123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 32521866 - 32521799
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||||||||||| |  |||||||  ||||||||| ||||||||||||||||||||    
T  32521866 aaaaaaggcttaaatatgaaaatagttct-gcaaataattgacattttggttttagtccctgtaaaaat 32521799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 42705208 - 42705168
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  42705208 tccttgtaaaattgattcatattggatttggtccttgtaat 42705168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 13572853 - 13572794
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| |  |||||||| ||||||||| |||||| |||||||||||||    
T  13572853 ttaaatatgaaaatagttcttgcaaatatatgacattttggttttaatccctgtaaaaat 13572794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 37608954 - 37609016
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| |||||| ||||| |||||||||||| ||||||||| ||| ||||||    
T  37608954 aggcttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactggaaaaat 37609016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 3371560 - 3371518
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  3371560 agtccttgtaaaattgattcatattggatttggttcttgtaat 3371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 12806807 - 12806765
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  12806807 agtccttgtaaaattgattcatattggatttggtcattgtaat 12806765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 14379238 - 14379280
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  14379238 agtccttgtaaaattgattcatattggatttggtcattgtaat 14379280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 16212763 - 16212713
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    ||||| ||||||||||||| | |||||||||||||| ||||||||||||||    
T  16212763 tgtaacctctgtttgttgtatacttaaactcttgtaacttttagtggtatc 16212713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 17457843 - 17457885
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  17457843 agtccttgtaaaattaattcatattggatttggtccttgtaat 17457885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 29683432 - 29683390
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  29683432 agtccttgtaaaattgatttatattggatttggtccttgtaat 29683390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 17457716 - 17457777
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    ||||||||| | ||||||||||| |||||||| ||| ||||| |||||||| ||||||||||    
T  17457716 ggcttaaatgtaaaaatagtccctgcaaatatttgaaattttggttttagttcctgtaaaaa 17457777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 4171781 - 4171741
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  4171781 tccttgtaaaattaattcatattggatttggtccttgtaat 4171741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 7877323 - 7877383
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||| |||||||||  |||||||  || |||| |||||||||||    
T  7877323 cttaaatatgaaaatagtccctgcaaatatcatacattttgattgtagttcctgtaaaaat 7877383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 7877712 - 7877648
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| |||||||||||||| ||||| ||||||||||| | |||| ||| |||||||| |||||||    
T  7877712 taggtttaaatatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaat 7877648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 305 - 344
Target Start/End: Original strand, 28401123 - 28401162
Alignment:
Q  305 tttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  28401123 tttgttgtgttctttaactcttgtaacttttagtggtatc 28401162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 37609341 - 37609278
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||  ||||||||||| | |||| |||||||||||| |||||||    
T  37609341 aggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaat 37609278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 41594083 - 41594118
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||| |||||||||||||||||||||||    
T  41594083 gtaaaattgatttatattggatttggtccttgtaat 41594118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 2395151 - 2395217
Alignment:
Q  126 aataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||| |||| ||| | ||||||||||| | ||||  ||||||||||| |||||||    
T  2395151 aataggcttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaat 2395217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 3371687 - 3371625
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| ||| | | |||||  ||||||||| ||||||||||| ||||||||    
T  3371687 ggcttaaatatgaaaattgtctcagtaaatacgtgacattttggttttagtcccagtaaaaat 3371625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 3952882 - 3952832
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||||||||||||||||| || | || ||||||| ||||||||||||||    
T  3952882 tgtaatctctgtttgttgtgatcattaattcttgtaacttttagtggtatc 3952832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 6164023 - 6164065
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||    
T  6164023 agtccttgtaaaattgattcatattgaatttggttcttgtaat 6164065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 16084126 - 16084176
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    ||||| ||||||||||||| ||||| ||||||||||  |||||||||||||    
T  16084126 tgtaacctctgtttgttgtattctttaactcttgtaatttttagtggtatc 16084176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 25318449 - 25318483
Alignment:
Q  265 taaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||| ||||||||||||||||    
T  25318449 taaaattgattcatattgaatttggtccttgtaat 25318483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 25318679 - 25318617
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||  ||||||||||| | |||| |||||||||||| |||||||    
T  25318679 ggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaat 25318617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 14379497 - 14379436
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| ||||||||||  | |||| |||||||||||| |||||||    
T  14379497 gcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaat 14379436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 3371302 - 3371362
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| |||| ||||  | ||||||||| | |||| ||||||||||||||||||||    
T  3371302 cttaaatatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaat 3371362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 38873473 - 38873533
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    ||||||||||| |||| |||||  ||||||||| || |||| |||||||||||| ||||||    
T  38873473 gcttaaatatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaa 38873533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 212408 - 212472
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  212408 taggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaat 212472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 212537 - 212579
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  212537 agtccttgtaaaattgattcatattggatttggtccttgtaat 212579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 212798 - 212735
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||||| ||||||||||  |||| |||||||||||| |||||||    
T  212798 aggcttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaat 212735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 2835480 - 2835416
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2835480 taggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctgtaaaaat 2835416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 18764280 - 18764345
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  18764280 ataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaat 18764345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 6944044 - 6943980
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  6944044 taggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaat 6943980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 31186726 - 31186670
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaa 189  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  31186726 ttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaa 31186670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 24332640 - 24332585
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  24332640 ttaaatatgaaaattgtccctgcaaatatctgacattttagttttagtccctgtaa 24332585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 31402909 - 31402972
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||||||| |||||||||    
T  31402909 aggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaaat 31402972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 3273105 - 3273043
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  3273105 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaat 3273043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 6892132 - 6892071
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||||    
T  6892132 gcttaaatatgaaaataatccttgtaaatatctgacattttagttttagtccctgtaaaaat 6892071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 26479324 - 26479385
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  26479324 ggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaa 26479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 13154623 - 13154562
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||  |||||||||||||||||  ||||| |||||||||||||    
T  13154623 gcttaaatatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaat 13154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 9180428 - 9180368
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||||| |||||||||||||    
T  9180428 cttaaatatgaatataatccctgcaaatatctgacattttggttttaatccctgtaaaaat 9180368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 6943915 - 6943873
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  6943915 agtccttgtaaaattgattcatattggatttggtccttgtaat 6943873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31686030 - 31685972
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||||||||| |||||||   ||||||||||||||||| |||||||||||||    
T  31686030 ataggcttaaatatgaatatagtccttacaaatatctgacattttggttttagtccctg 31685972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 13154496 - 13154455
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  13154496 gtccttgtaaaattgattcatattggatttggtccttgtaat 13154455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 18764411 - 18764452
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  18764411 gtccttgtaaaattgattcatattggatttggtccttgtaat 18764452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 13405704 - 13405664
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  13405704 tccttgtaaaattgattcatattggatttggtccttgtaat 13405664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 6943654 - 6943717
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| |||||||||||||| || | |||| |||||||||||| |||||||    
T  6943654 aggcttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaat 6943717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 31403045 - 31403080
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  31403045 gtaaaattgattcatattggatttggtccttgtaat 31403080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 3272978 - 3272936
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  3272978 agtccttgtaaaattgattcatattggatttggtctttgtaat 3272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 6892036 - 6891994
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  6892036 agtccttgtaaaattgattcatattcgatttggtccttgtaat 6891994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 24332520 - 24332478
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  24332520 agtccttgtaaaattgattcatattgaatttggtccttgtaat 24332478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 31186372 - 31186434
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  31186372 ggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 31186434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 31186631 - 31186589
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  31186631 agtccttgtaaaattgattcatattggatttggtccttataat 31186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 220509 - 220573
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| |||||||    
T  220509 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaat 220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 689664 - 689728
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| |||||||    
T  689664 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaat 689728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 734132 - 734196
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| |||||||    
T  734132 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaat 734196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 858028 - 858092
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| |||||||    
T  858028 taggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaat 858092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 13154235 - 13154299
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| |||||||||||   |||| |||||||||||| |||||||    
T  13154235 taggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaat 13154299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 220763 - 220728
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||| |||||||    
T  220763 gtaaaattgattcatattggatttggtctttgtaat 220728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 689918 - 689883
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||| |||||||    
T  689918 gtaaaattgattcatattggatttggtctttgtaat 689883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 734386 - 734351
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||| |||||||    
T  734386 gtaaaattgattcatattggatttggtctttgtaat 734351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 858282 - 858247
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||| |||||||    
T  858282 gtaaaattgattcatattggatttggtctttgtaat 858247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 3272746 - 3272809
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| ||||  |||| ||||||||||| | |||| |||||||||||| |||||||    
T  3272746 aggcttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctataaaaat 3272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 13405830 - 13405771
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||| ||||||||||  | |||||||| ||||||||| |||||| |||||||||||||    
T  13405830 ttaaatgtgaaaatagtttctgcaaatatttgacattttggttttaatccctgtaaaaat 13405771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 18764670 - 18764611
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaa 189  Q
    ||||||||||||||||| ||||| ||||||||||| | |||| ||| |||||||| ||||    
T  18764670 ggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttatagtccctataaa 18764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 9180303 - 9180261
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||| |||||||||||||||| ||||    
T  9180303 agtccttgtaaaattgattcagattggatttggtccttataat 9180261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 26479679 - 26479618
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    ||||| |||||| |||| ||||| ||||||||||| | |||| |||||||||||| ||||||    
T  26479679 ggctttaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaa 26479618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 20112424 - 20112482
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| ||||||||   |||||||||||||||| |||||||||||    
T  20112424 ggcttaaatatggaaatggtccctgcaaatat---acattttagttttagt-cctgtaaaaat 20112482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 127 - 191
Target Start/End: Complemental strand, 50625152 - 50625088
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  50625152 ataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaa 50625088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 20061795 - 20061858
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  20061795 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 20061858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 28032033 - 28031970
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  28032033 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 28031970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 43191655 - 43191716
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  43191655 gcttaaatatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaat 43191716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 14602399 - 14602339
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccct 184  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  14602399 aaaataggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccct 14602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 26244545 - 26244609
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  26244545 taggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaat 26244609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 37172245 - 37172308
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||||||||||    
T  37172245 aggcttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaat 37172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 39027480 - 39027541
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  39027480 gcttaaatgtgaaaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaat 39027541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 50096132 - 50096193
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  50096132 gcttaaatatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaat 50096193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 42155135 - 42155072
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||  |||||||||||    
T  42155135 aggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaat 42155072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 12322478 - 12322416
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgac-attttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  12322478 gcttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaat 12322416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 26244937 - 26244872
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||||||||| || |||||||||||||||||| |||||| |||||| ||||||    
T  26244937 ataggcttaaatgtgaaaatagttcctgcaaatatctgacattttggttttaatccctgaaaaaat 26244872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 33944 - 33880
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| ||||||| || |  ||||||||||||||||| ||||||||||||||||||||    
T  33944 taggcttaaataagaaaataatctctacaaatatctgacattttggttttagtccctgtaaaaat 33880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 39288148 - 39288212
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||||  ||||||| |||||||||  |||||||| ||||||||||    
T  39288148 taggcttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctgtaaaaat 39288212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 47829347 - 47829287
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||| |||||||||||||| ||||| |||||||||||||||||| |||||||| |||||||    
T  47829347 taggtttaaatatgaaaattgtccctgcaaatatctgacattttggttttagttcctgtaa 47829287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 14602268 - 14602226
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14602268 agtccttgtaaaattgattcatattggatttggtccttgtaat 14602226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 28031905 - 28031863
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  28031905 agtccttgtaaaattgattcatattggatttggtccttgtaat 28031863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 50096518 - 50096456
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||  |||| |||||||||    
T  50096518 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggtttaggtccgtgtaaaaat 50096456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 28031640 - 28031697
Alignment:
Q  125 aaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtcc 182  Q
    ||||||||||||||||| |||| ||||| ||||||||||| | |||||||||||||||    
T  28031640 aaataggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtcc 28031697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 33553 - 33617
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||| ||  |||| ||||||||||||| |||| |||||||||||| |||||||    
T  33553 taggcttaaatatgaacatgatccctgcaaatatctgacgttttggttttagtccctataaaaat 33617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 20061925 - 20061965
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  20061925 tccttgtaaaattgattcatattggatttggtccttgtaat 20061965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 37172375 - 37172415
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  37172375 tccttgtaaaattgattcatattggatttggtccttgtaat 37172415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 12322089 - 12322152
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| ||| | | ||||||||||| |||| |||||||||||| |||||||    
T  12322089 aggcttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaat 12322152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 20062184 - 20062121
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  20062184 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 20062121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 26244800 - 26244765
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  26244800 gtaaaattgattcatattggatttggtccttgtaat 26244765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 33619028 - 33619063
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  33619028 gtaaaattgattcatattggatttggtccttgtaat 33619063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 33815 - 33773
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  33815 agtccttgtaaaattgattcatattggattttgtccttgtaat 33773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 10914032 - 10913990
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  10914032 agtccttgtaaaattgattcatattggaattggtccttgtaat 10913990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 12322350 - 12322308
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  12322350 agtccttgtaaaattgattcatattagatttggtccttgtaat 12322308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 42155000 - 42154966
Alignment:
Q  265 taaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  42155000 taaaattgattcatattggatttggtccttgtaat 42154966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 43191781 - 43191823
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  43191781 agtccttgtaaaattgattcatattggatttggtctttgtaat 43191823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 47829220 - 47829178
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  47829220 agtccttgtaaaattgattcatattgaatttggtccttgtaat 47829178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 50096391 - 50096349
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  50096391 agtccttgtaaaattgattcatattgaatttggtccttgtaat 50096349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 39027731 - 39027678
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtcc 182  Q
    ||||||||||||| |||| ||||| |||||||| ||| ||||||||||||||||    
T  39027731 aggcttaaatatggaaatggtccctgcaaatatttgatattttagttttagtcc 39027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 43510352 - 43510401
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtat 343  Q
    |||||||||||||||||||| || | |||||||||| |||||||||||||    
T  43510352 tgtaatctctgtttgttgtgatcattaactcttgtaacttttagtggtat 43510401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 14602006 - 14602070
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| ||||||||||| || ||| |||||||||| | |||||||    
T  14602006 taggcttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaat 14602070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 50625017 - 50624982
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||| ||||||||||||    
T  50625017 gtaaaattgattcatattggattcggtccttgtaat 50624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 39288279 - 39288321
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||| |||||||||||||||||||| |||||||    
T  39288279 agtccttgtaaaatagattcatattggatttggtctttgtaat 39288321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 7337062 - 7337103
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaa 298  Q
    |||||| | |||||||||| ||||||||||||||||||||||    
T  7337062 agtccttgcaaaattgatttatattggatttggtccttgtaa 7337103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 51999451 - 51999492
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacatttt 171  Q
    ||||||||||||||||||||| | |||||||||||| |||||    
T  51999451 ggcttaaatatgaaaatagtctctgcaaatatctgatatttt 51999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 33619283 - 33619219
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| |||||||||||   |||| |||||||| ||| |||||||    
T  33619283 taggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaat 33619219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 39288530 - 39288478
Alignment:
Q  140 tgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||| ||||| ||||||||||||| ||||||||||| ||| | |||||||    
T  39288530 tgaaaatggtccctgcaaatatctgacgttttagttttaatccttataaaaat 39288478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 4368 - 4305
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4368 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 4305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 3980 - 4043
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  3980 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 4043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 56; Significance: 4e-23; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 25522 - 25459
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  25522 aggcttaaatatgaaaatagtccccgcaaatatctgatattttggttttagtccctgtaaaaat 25459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 25369 - 25327
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  25369 agtccttgtaaaattgattcatattggatttgatccttgtaat 25327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 25120 - 25183
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| |||||   |||||| |||| |||| |||||||||||| |||||||    
T  25120 aggcttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaat 25183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 19158079 - 19158016
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  19158079 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 19158016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 20757478 - 20757415
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  20757478 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 20757415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 24354 - 24416
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  24354 ggcttaaatatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaat 24416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 44219289 - 44219354
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  44219289 atagacttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtcactgtaaaaat 44219354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 42517250 - 42517190
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  42517250 cttaaatgtgaaaataatccccgcaaatatctgacattttggttttagtccctgtaaaaat 42517190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 44483613 - 44483549
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||||||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  44483613 taggcttaaatgtgaaaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaat 44483549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 40729449 - 40729386
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  40729449 aggcttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaat 40729386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 830067 - 830006
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  830067 ataggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 830006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 1195247 - 1195186
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  1195247 ataggcttaaatgtgaaaatagtccttgcaaatatctgacattttagttttaatccctgtaa 1195186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 22364656 - 22364713
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  22364656 gcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaa 22364713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 13426325 - 13426385
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  13426325 cttaaatatcaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaat 13426385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 34595318 - 34595379
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgac-attttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  34595318 cttaaatatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaat 34595379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 13426677 - 13426615
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||  ||| ||||| ||||||||||||| ||||||||||||||||| |||||||    
T  13426677 ggcttaaatatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaat 13426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 19476780 - 19476718
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgaca-ttttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||  |||||||||||| | ||||||||||||| |||||||||||    
T  19476780 gcttaaatatgaaaatagtccttgcaaatatctgatatttttagttttagttcctgtaaaaat 19476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 34595704 - 34595642
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| ||||| | ||||||||||| |||| |||||||||||| |||||||    
T  34595704 ggcttaaatatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaat 34595642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 35026443 - 35026505
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| ||||| ||||||| |||| ||||||||||||||||||||    
T  35026443 ggcttaaatatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaat 35026505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 35026702 - 35026660
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  35026702 agtccttgtaaaattgattcatattggatttggtccttgtaat 35026660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 42517125 - 42517083
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  42517125 agtccttgtaaaattgattcatattggatttggtccttgtaat 42517083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 44219419 - 44219461
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  44219419 agtccttgtaaaattgattcatattggatttggtccttgtaat 44219461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 44483484 - 44483442
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  44483484 agtccttgtaaaattgattcatattggatttggtccttgtaat 44483442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 31579557 - 31579598
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  31579557 gtccttgtaaaattgattcatattggatttggtccttgtaat 31579598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 24483 - 24523
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24483 tccttgtaaaattgattcatattggatttggtccttgtaat 24523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 19476650 - 19476610
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  19476650 tccttgtaaaattgattcatattggatttggtccttgtaat 19476610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 44483225 - 44483289
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||| |||||| |||| ||||| ||||||||||||| |||| |||||||||||| |||||||    
T  44483225 taggctttaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaat 44483289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 35026829 - 35026767
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| | |||||| ||||||||| |||||||| | |||||||||    
T  35026829 aggcttaaatatgaaaatagtccctgtaaatat-tgacattttggttttagttcatgtaaaaat 35026767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 22364778 - 22364820
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  22364778 agtccttgcaaaattgattcatattggatttggtccttgtaat 22364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 22954465 - 22954507
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  22954465 agtccttgtaaaattgattcatattgaatttggtccttgtaat 22954507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 34487400 - 34487358
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  34487400 agtccttgtaaaattgattcatattggatttggtcattgtaat 34487358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 34595444 - 34595486
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  34595444 agtccttgtaaaattgattcatattagatttggtccttgtaat 34595486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 40729321 - 40729279
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  40729321 agtccttgtaaaattgattcatattcgatttggtccttgtaat 40729279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 42516866 - 42516927
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| ||||||||||| |||||| |||||||| ||| |||||||    
T  42516866 gcttaaatatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaat 42516927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 40729089 - 40729145
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||||    
T  40729089 aggcttaaatatggaaatggtccctgcaaatatctggcgtttttgttttagtccctg 40729145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 8771013 - 8770962
Alignment:
Q  294 tgtaatctctgttt-gttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||||||||||| ||||||||||| |||||||||| ||| ||||||||||    
T  8771013 tgtaatctctgttttgttgtgttctttaactcttgtaacttctagtggtatc 8770962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 19157944 - 19157909
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||| ||||||||||||    
T  19157944 gtaaaattgattcatattggattcggtccttgtaat 19157909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 20757343 - 20757308
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20757343 gtaaaattgattcatattggattcggtccttgtaat 20757308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 44219680 - 44219617
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||||||||| ||||||||||  | |||| |||||| ||||| |||||||    
T  44219680 aggcttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaat 44219617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 19476387 - 19476453
Alignment:
Q  126 aataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||| |||| ||||| || ||||| || | |||| |||||||||||| |||||||    
T  19476387 aataggcttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaat 19476453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 23177296 - 23177263
Alignment:
Q  266 aaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||||| |||||||    
T  23177296 aaaattgattcatattggatttggtcattgtaat 23177263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 40017200 - 40017152
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggta 342  Q
    |||||||||||||||||||| |  | |||||||||| ||||||||||||    
T  40017200 tgtaatctctgtttgttgtgatactgaactcttgtaacttttagtggta 40017152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 16959761 - 16959823
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16959761 ggcttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaat 16959823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 17865361 - 17865299
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  17865361 ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaat 17865299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 4712563 - 4712500
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  4712563 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaat 4712500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 37815728 - 37815665
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  37815728 aggcttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaat 37815665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 42239455 - 42239396
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  42239455 ttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctctgtaaaaat 42239396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 22487606 - 22487545
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaa 188  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  22487606 ataggcttaaatatgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaa 22487545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 26314474 - 26314534
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaa 190  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26314474 ggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaa 26314534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 16492032 - 16491969
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||||||    
T  16492032 aggcttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaat 16491969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 13492882 - 13492944
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||    
T  13492882 ggcttaaatatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaat 13492944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 17107817 - 17107765
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtc 181  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17107817 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtc 17107765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 13682999 - 13683064
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||| ||||  |||| |||||||||||||||||| |||||||||||| |||||||    
T  13682999 ataggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaat 13683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 5720945 - 5721013
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  5720945 aaaataggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 5721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 13683372 - 13683320
Alignment:
Q  140 tgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||||||||    
T  13683372 tgaaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaat 13683320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 989461 - 989398
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||||| |||| |||||||||||| |||||||    
T  989461 aggcttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaat 989398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 32592744 - 32592803
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||| ||||||||||||| |||||||| ||||||||| |||||||||| |||||||||    
T  32592744 ttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaat 32592803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 46481305 - 46481250
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtcc 182  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| | ||||||||    
T  46481305 ataggcttaaatatgaaaatagtccctgcaaatatctaacattttggatttagtcc 46481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 16959889 - 16959931
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  16959889 agtccttgtaaaattgattcatattggatttggtccttgtaat 16959931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 22487478 - 22487436
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  22487478 agtccttgtaaaattgattcatattggatttggtccttgtaat 22487436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 32592868 - 32592910
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  32592868 agtccttgtaaaattgattcatattggatttggtccttgtaat 32592910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 37815599 - 37815557
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  37815599 agtccttgtaaaattgattcatattggatttggtccttgtaat 37815557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 46081424 - 46081486
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||  ||||||||||||  ||||||||||||||||| |||||||||||| |||||||    
T  46081424 ggcttaaatcagaaaatagtccctccaaatatctgacatttttgttttagtccctataaaaat 46081486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 46481175 - 46481133
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  46481175 agtccttgtaaaattgattcatattggatttggtccttgtaat 46481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 2184421 - 2184474
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtcc 182  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||||||||||    
T  2184421 aggcttaaatatgaaaatagcctctgcaaatatctgacattttggttttagtcc 2184474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 989078 - 989137
Alignment:
Q  133 ttaaatatgaaaatagtccccgc-aaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||| |||||||||||    
T  989078 ttaaatatgaaaatagtccctgccaaatatctgacattttggttttagt-cctgtaaaaat 989137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 4712434 - 4712394
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  4712434 tccttgtaaaattgattcatattggatttggtccttgtaat 4712394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 16960151 - 16960087
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| ||||||||||  |||||| |||||||||||| |||||||    
T  16960151 taggcttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaat 16960087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 17865232 - 17865192
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  17865232 tccttgtaaaattgattcatattggatttggtccttgtaat 17865192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 39385174 - 39385242
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| |||||  ||||||| ||||||||| | |||| || ||||||||||    
T  39385174 aaaataggcttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctgtaaaaat 39385242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 11021924 - 11021889
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  11021924 gtaaaattgattcatattggatttggtccttgtaat 11021889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 989200 - 989242
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  989200 agtccttgtaaaattgattcatattgaatttggtccttgtaat 989242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 11021671 - 11021733
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| |||||  |||||||||| | |||| |||||||||||| |||||||    
T  11021671 ggcttaaatatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaat 11021733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 12792566 - 12792632
Alignment:
Q  126 aataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||| ||||||||     |||||||||| |||||| ||||||||||||||||||||    
T  12792566 aataggcttaaatataaaaatagttatttcaaatatctgtcattttggttttagtccctgtaaaaat 12792632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 13683262 - 13683220
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  13683262 agtccttgtaaaattgattcatattggatttggtccttataat 13683220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 16491905 - 16491863
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  16491905 agtccttgtaaaattgattcatattggatttggttcttgtaat 16491863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 17107690 - 17107648
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||| ||||||||||||||||||||||||||||||||    
T  17107690 agtccttgtagaattgattcatattggatttggtccttgtaat 17107648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 43750205 - 43750163
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  43750205 agtccttgtaaaattgtttcatattggatttggtccttgtaat 43750163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 43750329 - 43750279
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtc 181  Q
    |||||||||||||||||||||| ||||||||| | |||||| |||||||||    
T  43750329 gcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagtc 43750279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 46639551 - 46639601
Alignment:
Q  294 tgtaatctctgttt-gttgtgttcttaaactcttgtatcttttagtggtat 343  Q
    |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  46639551 tgtaatctctgttttgttgtgttctttaactcttgtaacttttagtggtat 46639601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 13493011 - 13493051
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  13493011 tccttgtaaaattgattcatattggatttggttcttgtaat 13493051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 22487216 - 22487280
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| |||||||||||||||||   |||| |||||||||| | |||||||    
T  22487216 taggcttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaat 22487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 26314600 - 26314640
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgta 297  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  26314600 agtccttgtaaagttgattcatattggatttggtccttgta 26314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 298
Target Start/End: Original strand, 12792699 - 12792738
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaa 298  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  12792699 tccttgtaaaattgattcatattagatttggtccttgtaa 12792738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 16491644 - 16491707
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||| ||||  | ||||||||| ||||||| ||||||| ||| |||||||    
T  16491644 aggcttaaatatgaaaatggtccttgtaaatatctggcattttaattttagttcctataaaaat 16491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 17107429 - 17107492
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| | |||||| || | ||||||||||||||||||| |||||    
T  17107429 aggcttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaat 17107492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 20046053 - 20046018
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||| |||||||||||||||||||||||    
T  20046053 gtaaaattgatttatattggatttggtccttgtaat 20046018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 46480943 - 46480998
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccct 184  Q
    |||||||||||||||||| ||||  ||||||||||| | |||| ||||||||||||    
T  46480943 aggcttaaatatgaaaatggtccttgcaaatatctggcgttttggttttagtccct 46480998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 5721210 - 5721168
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||  |||||||||||||||||||||||||    
T  5721210 agtccttgtaaaattggatcatattggatttggtccttgtaat 5721168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 9301695 - 9301737
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||| ||||||||||||||||||| |||||||    
T  9301695 agtccttgtaaaattaattcatattggatttggtcattgtaat 9301737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 37815339 - 37815401
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| | ||||||||| |||||| | |||||||||| |||||||    
T  37815339 ggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaat 37815401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 178
Target Start/End: Complemental strand, 46081757 - 46081711
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagtttta 178  Q
    ||||||||||||||| || |||||||||||||||| |||| ||||||    
T  46081757 cttaaatatgaaaatggttcccgcaaatatctgacgttttggtttta 46081711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 55223229 - 55223179
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||| |||||    
T  55223229 tgtaacctctgtttgttgtattctttaactcttgtaacttttagttgtatc 55223179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 4712174 - 4712227
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagt 180  Q
    |||||||||||||||||||| ||||| |||||||| || | |||| ||||||||    
T  4712174 ataggcttaaatatgaaaatggtccctgcaaatatttggcgttttggttttagt 4712227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 39385287 - 39385328
Alignment:
Q  258 gtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||| ||||||||||||||||||||||||| | ||||||||    
T  39385287 gtccttgtaaaattgattcatattggatttgatacttgtaat 39385328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 2184519 - 2184559
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgta 297  Q
    |||||| |||||||||||||||||||||||| || ||||||    
T  2184519 agtccttgtaaaattgattcatattggattttgttcttgta 2184559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 11022060 - 11021996
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| |||||||||||||| ||||| | | |||||||| ||||| |||||| ||| |||||||||    
T  11022060 taggtttaaatatgaaaatggtccctgtacatatctgatattttcgttttaatccatgtaaaaat 11021996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 17864943 - 17865007
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||  ||||||||||| | |||| |||||||||| | |||||||    
T  17864943 taggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccatataaaaat 17865007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 33162316 - 33162382
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33162316 aaaaaaggcttaaatatgaaaatagtccccgcaaatatctgacatttta-ttttagtctctgtaaaaa 33162382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 50645858 - 50645795
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  50645858 aggcttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaat 50645795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 46962579 - 46962641
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaa 191  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  46962579 aggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaa 46962641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 32315371 - 32315436
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  32315371 ataggcttaaatgtgaaaatagtccctgcaaatatctgacattttggttttagtctctgtaaaaat 32315436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 49500234 - 49500166
Alignment:
Q  124 aaaataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||    
T  49500234 aaaaaaggcttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaat 49500166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 17109848 - 17109911
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||    
T  17109848 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaat 17109911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 27934837 - 27934774
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||    
T  27934837 aggcttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaat 27934774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 29838289 - 29838354
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  29838289 atagacttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaat 29838354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 33162707 - 33162643
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  33162707 taggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaat 33162643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 55092593 - 55092530
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||| || ||||||||||    
T  55092593 aggcttaaatatgaaaatagtccctccaaatatctgacattttggttttattctctgtaaaaat 55092530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 14545831 - 14545893
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaa 190  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| |||||||||| |||||||    
T  14545831 taggcttaaatgtgaaaatagtccttgcaaatatctgacattttggttttagtccatgtaaaa 14545893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 32315759 - 32315698
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| |||||||||||| ||||| ||||||||||||||||||||    
T  32315759 gcttaaatatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaaat 32315698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 38807922 - 38807861
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||    
T  38807922 gcttaaatatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaat 38807861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 26582621 - 26582673
Alignment:
Q  140 tgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  26582621 tgaaaatagtctccgcaaatatctgatattttggttttagtccctgtaaaaat 26582673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 26582995 - 26582935
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| |||| ||||| ||||||||||||||||||  |||||||||||||||||||    
T  26582995 cttaaatatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaat 26582935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 42093392 - 42093455
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||||||| |  | ||||||||||||||| | ||||||||||||||||||    
T  42093392 aggcttaaatatgaaaatagtctctcctaatatctgacattttggatttagtccctgtaaaaat 42093455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 17109976 - 17110018
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17109976 agtccttgtaaaattgattcatattggatttggtccttgtaat 17110018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 33162445 - 33162487
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  33162445 agtccttgtaaaattgattcatattggatttggtccttgtaat 33162487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 42093520 - 42093562
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  42093520 agtccttgtaaaattgattcatattggatttggtccttgtaat 42093562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 50645730 - 50645688
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  50645730 agtccttgtaaaattgattcatattggatttggtccttgtaat 50645688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 52835803 - 52835761
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  52835803 agtccttgtaaaattgattcatattggatttggtccttgtaat 52835761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 52835930 - 52835869
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||||||| ||||||||| | |||||| |||||||| |||||||||||    
T  52835930 ggcttaaatatgaaaatagtccctgcaaatatccgtcattttggttttagt-cctgtaaaaat 52835869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 14546219 - 14546159
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| |||| ||||| |||||||||||||||||| |||| |||| ||||||||||    
T  14546219 cttaaatatggaaatggtccctgcaaatatctgacattttggtttcagtcactgtaaaaat 14546159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 17109742 - 17109797
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtcc 182  Q
    |||| ||||||||||||||||||||| ||||||||||  |||||| ||||||||||    
T  17109742 atagacttaaatatgaaaatagtccctgcaaatatctagcattttggttttagtcc 17109797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 27934448 - 27934511
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  27934448 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaat 27934511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 45683754 - 45683703
Alignment:
Q  294 tgtaatctctgttt-gttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  45683754 tgtaatctctgttttgttgtgttctttaactcttgtaacttttagtggtatc 45683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 889253 - 889295
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  889253 agtccttgtaaaattgattcatattggatttggtccttataat 889295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 26582737 - 26582779
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  26582737 agtccttgtaaaattgattcatattggatttggtcattgtaat 26582779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 29838419 - 29838461
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  29838419 agtccttgtaaaattgattcatattggatttagtccttgtaat 29838461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 32315501 - 32315543
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||| |||||||||||||||||||||||||||||    
T  32315501 agtccttgtaaaagtgattcatattggatttggtccttgtaat 32315543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 299
Target Start/End: Complemental strand, 38807787 - 38807754
Alignment:
Q  266 aaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||    
T  38807787 aaaattgattcatattggatttggtccttgtaat 38807754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 46962969 - 46962905
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||| ||||||||||| | | || |||||||||||| |||||||    
T  46962969 taggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaat 46962905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 49500099 - 49500059
Alignment:
Q  259 tcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  49500099 tccttgtaaaattgatttatattggatttggtccttgtaat 49500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 7029632 - 7029601
Alignment:
Q  268 aattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  7029632 aattgattcatattggatttggtccttgtaat 7029601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 27285220 - 27285185
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27285220 gtaaaattgattcatattggatttggtccttataat 27285185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 49121967 - 49121932
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49121967 gtaaaattgattcatattggatttggtccttataat 49121932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 55092202 - 55092265
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||||||||  |||| | ||||||||||| |||| ||||||||| || |||||||    
T  55092202 aggcttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctctataaaaat 55092265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 55092458 - 55092423
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||||||||||||||||||||| |||||||||||    
T  55092458 gtaaaattgattcatattggatttagtccttgtaat 55092423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 14545961 - 14546003
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||| || |||||||    
T  14545961 agtccttgtaaaattgattcatattggatttgatctttgtaat 14546003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 27284968 - 27285030
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| ||||||||||| ||||||  ||||||| ||| |||||||    
T  27284968 ggcttaaatatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaat 27285030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 27934709 - 27934667
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||| |||||||||| ||||||||||||    
T  27934709 agtccttgtaaaattgatttatattggattcggtccttgtaat 27934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 29838683 - 29838617
Alignment:
Q  126 aataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||| |||| ||||| ||||||||||  | |||| |||||||||| | |||||||    
T  29838683 aataggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaat 29838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 52835543 - 52835605
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||| |||| ||||| ||||||||||| | ||||  ||||||||||| |||||||    
T  52835543 ggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaat 52835605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 16056344 - 16056409
Alignment:
Q  127 ataggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||| ||||||||| || | ||||| ||||||||||| | |||| |||||||||||| |||||||    
T  16056344 ataggtttaaatatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaat 16056409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 49121714 - 49121775
Alignment:
Q  131 gcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||| |||| ||||| ||||||||||| ||||||  |||||| |||| |||||||    
T  49121714 gcttaaatatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaat 49121775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Original strand, 17605390 - 17605432
Alignment:
Q  300 ctctgtttgttgtgttcttaaactcttgtatcttttagtggtatc 344  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  17605390 ctctgtttgttgt-ttcttaaactcttgtat-ttttagtggtatc 17605432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 20823058 - 20823094
Alignment:
Q  294 tgtaatctctgtttgttgtgttcttaaactcttgtat 330  Q
    ||||||||||||||||||| || ||||||||||||||    
T  20823058 tgtaatctctgtttgttgtattattaaactcttgtat 20823094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 49499839 - 49499903
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||| ||||  |||||||||||   |||| |||||||||||| |||||||    
T  49499839 taggcttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaat 49499903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 36763 - 36820
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctg 185  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  36763 taggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctg 36820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 36890 - 36932
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  36890 agtccttgtaaaattgattcatattggatttggtccttgtaat 36932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 37121 - 37058
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    ||||||||||||| |||| ||||| ||||||||||  | |||| |||||||||||| |||||||    
T  37121 aggcttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaaaat 37058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 43274 - 43337
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  43274 aggcttaaatgtgaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaat 43337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 43409 - 43444
Alignment:
Q  264 gtaaaattgattcatattggatttggtccttgtaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  43409 gtaaaattgattcatattggatttggtccttgtaat 43444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 36379 - 36318
Alignment:
Q  129 aggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaa 190  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  36379 aggcttaaatataaaaatagtccctgcaaatatctgacgttttagttttagtccctataaaa 36318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 36119 - 36161
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  36119 agtccttgtaaaattgattcatattggattcggtccttgtaat 36161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 35995 - 36039
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagtttt 177  Q
    ||||||||||| ||||| || |||||||||||||||||| |||||    
T  35995 ttaaatatgaatatagttcctgcaaatatctgacattttcgtttt 36039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 44051 - 43994
Alignment:
Q  132 cttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaa 189  Q
    ||||||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  44051 cttaaatataaaaatagtccctgcaaatatttgacattttggttttagtccctgtaaa 43994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 43906 - 43970
Alignment:
Q  128 taggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||| |||||||||| ||||||||||| | |||| |||||||||| | |||||||    
T  43906 taggcttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtccttataaaaat 43970  T

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Target: scaffold0170 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 8539 - 8602
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttag-ttttagtccctgtaaaaat 192  Q
    ||||||||||||||||| ||||| |||||||||| ||||||| | |||||||||||||||||||    
T  8539 ggcttaaatatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaat 8602  T

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Target: scaffold0170; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 8667 - 8709
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  8667 agtccttgtaaaattgattcatattggatttagtccttgtaat 8709  T

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Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 4512 - 4554
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  4512 agtccttgtaaaattgattcatattggatttggtccttgtaat 4554  T

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Target: scaffold0167; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 4772 - 4713
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaa 189  Q
    |||||||||||| |||| ||||| |||||||| |||| |||| |||||||||||| ||||    
T  4772 ggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaa 4713  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 74172 - 74130
Alignment:
Q  257 agtcctggtaaaattgattcatattggatttggtccttgtaat 299  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  74172 agtccttgtaaaattgattcatattggatttggtccttgtaat 74130  T

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Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 74295 - 74252
Alignment:
Q  133 ttaaatatgaaaatagtccccgcaaatatctgacattttagttt 176  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||    
T  74295 ttaaatatgaaaatagtccctgcaaatatctaacattttggttt 74252  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 118416 - 118355
Alignment:
Q  130 ggcttaaatatgaaaatagtccccgcaaatatctgacattttagttttagtccctgtaaaaat 192  Q
    |||||||||||||||||  |||  |||||||||||| ||||| ||||| ||||||||||||||    
T  118416 ggcttaaatatgaaaattatcct-gcaaatatctgatattttggttttcgtccctgtaaaaat 118355  T

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