View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13943_low_45 (Length: 232)

Name: NF13943_low_45
Description: NF13943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13943_low_45
NF13943_low_45
[»] chr8 (60 HSPs)
chr8 (11-156)||(269556-269701)
chr8 (11-156)||(646220-646365)
chr8 (11-156)||(831955-832100)
chr8 (11-155)||(6776676-6776821)
chr8 (11-141)||(24108924-24109053)
chr8 (11-141)||(24719781-24719911)
chr8 (11-155)||(24387827-24387973)
chr8 (11-155)||(28835580-28835725)
chr8 (11-155)||(29758179-29758325)
chr8 (16-155)||(43375726-43375867)
chr8 (11-153)||(22008801-22008944)
chr8 (11-155)||(16043497-16043642)
chr8 (11-155)||(23508672-23508817)
chr8 (11-120)||(41509776-41509885)
chr8 (11-148)||(16416152-16416289)
chr8 (11-140)||(13664995-13665125)
chr8 (11-140)||(13724270-13724400)
chr8 (11-122)||(24931283-24931394)
chr8 (11-155)||(3433973-3434119)
chr8 (11-154)||(17343080-17343224)
chr8 (11-155)||(23631424-23631569)
chr8 (11-155)||(22909785-22909928)
chr8 (11-124)||(24547076-24547189)
chr8 (16-141)||(41243561-41243686)
chr8 (11-124)||(17148382-17148495)
chr8 (11-124)||(273351-273464)
chr8 (11-124)||(642385-642498)
chr8 (11-141)||(9950666-9950793)
chr8 (11-141)||(25120353-25120483)
chr8 (11-124)||(22090594-22090707)
chr8 (11-150)||(225295-225435)
chr8 (11-150)||(738918-739058)
chr8 (11-150)||(862813-862953)
chr8 (16-124)||(15321211-15321319)
chr8 (16-124)||(15501580-15501688)
chr8 (11-152)||(16204416-16204558)
chr8 (11-150)||(43683548-43683688)
chr8 (67-155)||(16041821-16041910)
chr8 (11-141)||(20479505-20479635)
chr8 (11-124)||(5236090-5236203)
chr8 (11-124)||(21854046-21854158)
chr8 (11-124)||(24663395-24663508)
chr8 (11-124)||(30118187-30118300)
chr8 (11-150)||(701708-701848)
chr8 (11-111)||(16676497-16676597)
chr8 (11-141)||(1788406-1788536)
chr8 (11-124)||(828191-828304)
chr8 (11-124)||(21846641-21846753)
chr8 (21-141)||(21679061-21679181)
chr8 (21-141)||(22323672-22323797)
chr8 (11-105)||(9951193-9951287)
chr8 (155-197)||(275944-275986)
chr8 (155-197)||(639863-639905)
chr8 (155-197)||(825669-825711)
chr8 (11-107)||(16875096-16875195)
chr8 (11-135)||(20569035-20569159)
chr8 (11-135)||(20575228-20575352)
chr8 (16-64)||(19995418-19995467)
chr8 (11-117)||(20656225-20656331)
chr8 (87-141)||(19995332-19995386)
[»] chr6 (54 HSPs)
chr6 (16-155)||(19985328-19985467)
chr6 (11-141)||(35017908-35018038)
chr6 (11-155)||(13623372-13623516)
chr6 (11-155)||(25954499-25954644)
chr6 (11-155)||(11214042-11214188)
chr6 (11-155)||(16235369-16235514)
chr6 (11-155)||(18740265-18740410)
chr6 (11-155)||(33316860-33317005)
chr6 (11-155)||(18578434-18578579)
chr6 (10-155)||(18835796-18835942)
chr6 (11-155)||(16828255-16828399)
chr6 (11-155)||(4988587-4988733)
chr6 (11-120)||(3142965-3143074)
chr6 (11-155)||(18844152-18844297)
chr6 (11-155)||(23975303-23975452)
chr6 (21-141)||(13016960-13017079)
chr6 (25-141)||(17787374-17787489)
chr6 (11-155)||(14628811-14628955)
chr6 (11-141)||(25647005-25647135)
chr6 (11-141)||(23151323-23151453)
chr6 (11-141)||(18775120-18775250)
chr6 (11-141)||(31626347-31626477)
chr6 (11-129)||(1659844-1659961)
chr6 (11-119)||(16104466-16104574)
chr6 (11-141)||(18421726-18421857)
chr6 (11-124)||(19608320-19608433)
chr6 (11-111)||(18088954-18089054)
chr6 (11-111)||(25173123-25173223)
chr6 (10-124)||(10486778-10486892)
chr6 (11-124)||(937273-937386)
chr6 (16-129)||(15860660-15860772)
chr6 (11-124)||(16229481-16229594)
chr6 (11-124)||(16378434-16378547)
chr6 (11-124)||(16385758-16385871)
chr6 (11-150)||(29871598-29871738)
chr6 (11-124)||(1652115-1652228)
chr6 (11-124)||(9480200-9480313)
chr6 (11-124)||(16646030-16646143)
chr6 (11-124)||(16651396-16651509)
chr6 (11-124)||(21787109-21787222)
chr6 (11-112)||(25746438-25746539)
chr6 (11-124)||(23986941-23987054)
chr6 (11-111)||(27656248-27656348)
chr6 (11-91)||(2182014-2182096)
chr6 (11-141)||(22428201-22428331)
chr6 (11-124)||(23162034-23162147)
chr6 (11-124)||(26087669-26087782)
chr6 (21-65)||(18005375-18005419)
chr6 (83-155)||(18005303-18005376)
chr6 (11-131)||(18396789-18396909)
chr6 (73-124)||(22227831-22227882)
chr6 (21-133)||(22866037-22866148)
chr6 (16-64)||(32895889-32895938)
chr6 (74-121)||(18128013-18128061)
[»] scaffold0171 (1 HSPs)
scaffold0171 (11-155)||(30649-30793)
[»] chr3 (74 HSPs)
chr3 (11-155)||(15861323-15861467)
chr3 (11-155)||(54043033-54043177)
chr3 (11-155)||(19944408-19944551)
chr3 (11-155)||(22272634-22272779)
chr3 (11-155)||(16818647-16818792)
chr3 (11-155)||(18905872-18906017)
chr3 (11-155)||(18915813-18915958)
chr3 (16-155)||(45580741-45580882)
chr3 (11-155)||(16259235-16259380)
chr3 (11-155)||(18908280-18908425)
chr3 (16-155)||(14695397-14695537)
chr3 (11-122)||(2045215-2045326)
chr3 (11-122)||(2047944-2048055)
chr3 (11-155)||(38165821-38165967)
chr3 (16-122)||(23490395-23490501)
chr3 (11-155)||(7851279-7851424)
chr3 (11-155)||(11812404-11812549)
chr3 (11-141)||(33339646-33339772)
chr3 (16-123)||(4948608-4948715)
chr3 (11-122)||(10736445-10736555)
chr3 (11-150)||(14846766-14846906)
chr3 (11-150)||(15470584-15470725)
chr3 (11-155)||(30140583-30140729)
chr3 (24-155)||(19572914-19573047)
chr3 (11-150)||(25056648-25056789)
chr3 (11-141)||(38527481-38527611)
chr3 (23-141)||(51160592-51160711)
chr3 (11-155)||(19229939-19230085)
chr3 (23-120)||(5225388-5225484)
chr3 (11-124)||(17059599-17059712)
chr3 (11-148)||(12796328-12796466)
chr3 (11-124)||(15573897-15574010)
chr3 (11-124)||(44227318-44227431)
chr3 (11-141)||(319744-319874)
chr3 (11-124)||(1469801-1469914)
chr3 (11-124)||(2451715-2451828)
chr3 (11-124)||(12266648-12266760)
chr3 (11-124)||(15612916-15613029)
chr3 (11-124)||(30151229-30151342)
chr3 (11-124)||(53768553-53768666)
chr3 (11-141)||(6148935-6149065)
chr3 (11-141)||(6155527-6155657)
chr3 (11-124)||(13963510-13963623)
chr3 (11-124)||(17215481-17215594)
chr3 (11-124)||(27838609-27838722)
chr3 (11-124)||(55314273-55314386)
chr3 (11-141)||(14296345-14296474)
chr3 (11-141)||(14301972-14302101)
chr3 (11-111)||(41268133-41268233)
chr3 (11-155)||(8629671-8629816)
chr3 (11-150)||(8270524-8270667)
chr3 (11-124)||(13977786-13977899)
chr3 (11-124)||(45858912-45859025)
chr3 (11-124)||(8277662-8277777)
chr3 (11-124)||(8306471-8306586)
chr3 (11-124)||(11694229-11694344)
chr3 (11-141)||(47786998-47787129)
chr3 (21-133)||(40937571-40937683)
chr3 (21-141)||(53900718-53900838)
chr3 (11-141)||(11199679-11199809)
chr3 (11-91)||(13815554-13815634)
chr3 (11-124)||(16746320-16746433)
chr3 (11-124)||(16936122-16936235)
chr3 (11-69)||(50114334-50114393)
chr3 (16-117)||(35121536-35121637)
chr3 (11-141)||(17098514-17098654)
chr3 (73-120)||(17936121-17936168)
chr3 (11-112)||(14286932-14287033)
chr3 (11-112)||(17537205-17537306)
chr3 (74-135)||(30204368-30204429)
chr3 (87-134)||(12351981-12352028)
chr3 (11-64)||(12352060-12352114)
chr3 (11-64)||(22148904-22148958)
chr3 (87-135)||(22148824-22148872)
[»] scaffold0132 (5 HSPs)
scaffold0132 (11-155)||(39109-39254)
scaffold0132 (11-124)||(126-239)
scaffold0132 (11-124)||(8086-8199)
scaffold0132 (21-141)||(3153-3273)
scaffold0132 (21-141)||(11113-11233)
[»] chr4 (52 HSPs)
chr4 (11-155)||(53909972-53910119)
chr4 (11-155)||(10641977-10642122)
chr4 (11-155)||(18245778-18245923)
chr4 (11-155)||(9293315-9293460)
chr4 (11-155)||(15274916-15275061)
chr4 (11-155)||(17150501-17150646)
chr4 (11-155)||(7134755-7134900)
chr4 (16-155)||(16520408-16520548)
chr4 (21-155)||(16366866-16367002)
chr4 (11-155)||(109383-109528)
chr4 (11-151)||(8372209-8372350)
chr4 (11-155)||(26677781-26677926)
chr4 (11-155)||(5685040-5685185)
chr4 (11-155)||(13244239-13244385)
chr4 (11-155)||(54050596-54050740)
chr4 (11-150)||(15138654-15138795)
chr4 (11-155)||(18166476-18166621)
chr4 (11-150)||(14994094-14994234)
chr4 (11-155)||(19998113-19998262)
chr4 (11-155)||(37474336-37474480)
chr4 (11-151)||(53707063-53707204)
chr4 (11-141)||(55379021-55379149)
chr4 (11-141)||(12838454-12838584)
chr4 (11-155)||(41066721-41066866)
chr4 (11-135)||(8874611-8874735)
chr4 (11-155)||(54120435-54120572)
chr4 (11-155)||(15211124-15211271)
chr4 (11-121)||(33738087-33738197)
chr4 (11-155)||(16330044-16330189)
chr4 (11-141)||(34392988-34393118)
chr4 (11-124)||(6403662-6403775)
chr4 (11-111)||(15289193-15289293)
chr4 (11-124)||(16475761-16475875)
chr4 (11-111)||(15296360-15296460)
chr4 (21-135)||(20814153-20814267)
chr4 (21-124)||(22356895-22356998)
chr4 (11-141)||(23272306-23272436)
chr4 (11-124)||(26337378-26337491)
chr4 (11-141)||(16395865-16395994)
chr4 (23-141)||(30457498-30457615)
chr4 (11-124)||(10486568-10486680)
chr4 (11-141)||(13752415-13752545)
chr4 (11-150)||(47355124-47355264)
chr4 (11-152)||(13050287-13050429)
chr4 (11-106)||(14949911-14950007)
chr4 (11-141)||(45461155-45461285)
chr4 (11-95)||(28266153-28266237)
chr4 (11-118)||(21961719-21961826)
chr4 (87-141)||(12901890-12901944)
chr4 (16-64)||(44344689-44344738)
chr4 (16-102)||(18496631-18496718)
chr4 (11-118)||(7848283-7848390)
[»] scaffold0046 (1 HSPs)
scaffold0046 (11-155)||(19620-19764)
[»] scaffold0407 (4 HSPs)
scaffold0407 (11-155)||(357-501)
scaffold0407 (11-155)||(6821-6965)
scaffold0407 (16-141)||(3915-4040)
scaffold0407 (16-141)||(10381-10506)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-135)||(27539-27663)
[»] chr7 (60 HSPs)
chr7 (11-155)||(2024297-2024441)
chr7 (11-155)||(32496669-32496813)
chr7 (11-155)||(13039352-13039498)
chr7 (11-155)||(7290510-7290653)
chr7 (11-155)||(368744-368889)
chr7 (11-155)||(11583060-11583206)
chr7 (11-155)||(15953305-15953450)
chr7 (16-155)||(15858598-15858738)
chr7 (11-155)||(2193051-2193196)
chr7 (11-155)||(122405-122551)
chr7 (11-155)||(6320996-6321141)
chr7 (11-119)||(1938881-1938989)
chr7 (11-155)||(3054602-3054748)
chr7 (11-122)||(7286801-7286912)
chr7 (16-141)||(113415-113543)
chr7 (16-155)||(36050856-36050997)
chr7 (11-124)||(2435483-2435596)
chr7 (21-141)||(12546068-12546189)
chr7 (11-122)||(7287469-7287580)
chr7 (16-141)||(3893001-3893126)
chr7 (11-141)||(26072394-26072525)
chr7 (11-141)||(26096181-26096312)
chr7 (11-141)||(12752782-12752912)
chr7 (11-129)||(48624502-48624619)
chr7 (11-124)||(12113644-12113757)
chr7 (11-111)||(18982150-18982250)
chr7 (11-141)||(15824631-15824761)
chr7 (11-134)||(26011334-26011456)
chr7 (11-124)||(7820821-7820934)
chr7 (11-124)||(7828132-7828245)
chr7 (11-124)||(11514020-11514133)
chr7 (11-124)||(13913268-13913381)
chr7 (11-124)||(15443712-15443825)
chr7 (11-124)||(16416113-16416226)
chr7 (11-124)||(27103699-27103812)
chr7 (11-124)||(27111047-27111160)
chr7 (11-124)||(27174513-27174626)
chr7 (11-124)||(42060445-42060558)
chr7 (10-141)||(13875212-13875343)
chr7 (11-150)||(30264250-30264390)
chr7 (11-111)||(15519026-15519128)
chr7 (21-141)||(44863089-44863210)
chr7 (11-87)||(16481128-16481204)
chr7 (11-95)||(13174122-13174208)
chr7 (11-134)||(25294421-25294544)
chr7 (11-124)||(37939185-37939298)
chr7 (11-104)||(38785820-38785913)
chr7 (16-124)||(48759241-48759349)
chr7 (11-124)||(10987506-10987620)
chr7 (11-141)||(45455840-45455971)
chr7 (11-96)||(13250375-13250460)
chr7 (11-64)||(19666310-19666363)
chr7 (11-124)||(10261881-10261996)
chr7 (11-141)||(11284947-11285077)
chr7 (11-141)||(18306097-18306227)
chr7 (11-107)||(13756470-13756568)
chr7 (11-141)||(13845151-13845281)
chr7 (63-122)||(16209646-16209705)
chr7 (11-64)||(141467-141521)
chr7 (16-141)||(12250204-12250329)
[»] scaffold0023 (4 HSPs)
scaffold0023 (11-155)||(86401-86546)
scaffold0023 (11-124)||(11414-11527)
scaffold0023 (62-155)||(156628-156722)
scaffold0023 (23-141)||(91872-91990)
[»] chr5 (52 HSPs)
chr5 (11-155)||(1222080-1222225)
chr5 (11-155)||(9733033-9733178)
chr5 (11-155)||(10780558-10780703)
chr5 (11-155)||(29193112-29193257)
chr5 (11-155)||(35793600-35793745)
chr5 (11-155)||(23512638-23512782)
chr5 (11-141)||(25212250-25212380)
chr5 (11-141)||(25276402-25276532)
chr5 (11-155)||(111409-111554)
chr5 (11-155)||(11579529-11579674)
chr5 (11-155)||(9908-10053)
chr5 (23-155)||(25944991-25945125)
chr5 (11-141)||(28257392-28257522)
chr5 (11-155)||(11340199-11340344)
chr5 (11-155)||(18780490-18780635)
chr5 (11-155)||(17474143-17474287)
chr5 (11-155)||(19497541-19497686)
chr5 (16-111)||(24470181-24470276)
chr5 (16-141)||(21392044-21392169)
chr5 (22-155)||(22885485-22885619)
chr5 (11-112)||(1171474-1171578)
chr5 (21-122)||(23509880-23509981)
chr5 (11-129)||(23442259-23442376)
chr5 (11-141)||(4863163-4863293)
chr5 (11-155)||(27186393-27186539)
chr5 (11-124)||(7423501-7423614)
chr5 (11-124)||(25424278-25424391)
chr5 (11-150)||(20594353-20594493)
chr5 (11-141)||(20710385-20710515)
chr5 (11-122)||(21647090-21647200)
chr5 (11-124)||(21922346-21922459)
chr5 (11-124)||(21934428-21934541)
chr5 (11-124)||(21940598-21940711)
chr5 (11-124)||(37011432-37011545)
chr5 (11-124)||(37050880-37050993)
chr5 (11-124)||(43446194-43446308)
chr5 (11-124)||(4202237-4202350)
chr5 (11-124)||(21075756-21075869)
chr5 (21-141)||(23986622-23986742)
chr5 (11-124)||(25902594-25902707)
chr5 (11-124)||(35580151-35580264)
chr5 (11-150)||(16534006-16534145)
chr5 (11-104)||(21235704-21235797)
chr5 (11-124)||(22368947-22369060)
chr5 (11-124)||(23326849-23326962)
chr5 (11-110)||(11213877-11213975)
chr5 (11-141)||(11339069-11339199)
chr5 (11-124)||(24594396-24594511)
chr5 (21-134)||(19403442-19403555)
chr5 (16-117)||(24185421-24185522)
chr5 (11-110)||(27007891-27007992)
chr5 (16-64)||(3671352-3671401)
[»] chr2 (43 HSPs)
chr2 (11-155)||(22272785-22272931)
chr2 (11-155)||(23806718-23806863)
chr2 (11-155)||(12644104-12644249)
chr2 (11-155)||(22282018-22282164)
chr2 (11-155)||(38707244-38707389)
chr2 (11-155)||(21139743-21139888)
chr2 (16-152)||(22861435-22861573)
chr2 (11-122)||(23003613-23003724)
chr2 (32-155)||(19889174-19889298)
chr2 (11-155)||(21276788-21276936)
chr2 (11-155)||(9655012-9655156)
chr2 (11-155)||(43645114-43645260)
chr2 (11-122)||(8886069-8886179)
chr2 (10-155)||(22692187-22692333)
chr2 (10-155)||(22696834-22696980)
chr2 (11-155)||(12638437-12638582)
chr2 (11-122)||(20629592-20629703)
chr2 (11-155)||(3801561-3801708)
chr2 (11-135)||(15631253-15631376)
chr2 (11-124)||(24687818-24687931)
chr2 (11-124)||(25210507-25210620)
chr2 (11-141)||(36892885-36893016)
chr2 (11-124)||(8941326-8941439)
chr2 (11-124)||(11233400-11233513)
chr2 (11-124)||(22515247-22515360)
chr2 (11-124)||(23818074-23818187)
chr2 (11-124)||(28777849-28777962)
chr2 (11-124)||(24828753-24828868)
chr2 (21-124)||(14908587-14908690)
chr2 (11-124)||(23772431-23772544)
chr2 (11-122)||(23837539-23837649)
chr2 (11-124)||(24833205-24833318)
chr2 (16-124)||(20013021-20013129)
chr2 (11-118)||(460449-460560)
chr2 (16-141)||(4450427-4450552)
chr2 (11-111)||(33125961-33126061)
chr2 (11-124)||(17398745-17398858)
chr2 (11-141)||(28969810-28969940)
chr2 (11-134)||(6877335-6877454)
chr2 (11-124)||(34821913-34822028)
chr2 (11-124)||(12725939-12726055)
chr2 (11-80)||(25422333-25422402)
chr2 (11-69)||(25878220-25878279)
[»] chr1 (46 HSPs)
chr1 (11-155)||(20947369-20947514)
chr1 (11-155)||(24498695-24498840)
chr1 (11-155)||(37846585-37846731)
chr1 (11-155)||(44037006-44037152)
chr1 (16-148)||(20251963-20252095)
chr1 (11-150)||(22225876-22226016)
chr1 (11-155)||(20895923-20896067)
chr1 (11-120)||(20929367-20929476)
chr1 (11-155)||(21857372-21857518)
chr1 (11-155)||(22351886-22352031)
chr1 (11-141)||(18505262-18505393)
chr1 (11-122)||(20529367-20529477)
chr1 (21-141)||(35052764-35052884)
chr1 (11-155)||(22079795-22079939)
chr1 (11-121)||(20443627-20443736)
chr1 (11-141)||(41217148-41217278)
chr1 (11-120)||(17146434-17146543)
chr1 (11-118)||(35935775-35935884)
chr1 (16-150)||(9193786-9193921)
chr1 (11-124)||(5074460-5074573)
chr1 (11-124)||(17002718-17002831)
chr1 (11-124)||(20827380-20827493)
chr1 (11-124)||(51450505-51450618)
chr1 (11-134)||(5676802-5676925)
chr1 (11-111)||(21652185-21652285)
chr1 (16-124)||(24522213-24522321)
chr1 (11-141)||(22408425-22408556)
chr1 (11-124)||(18062113-18062226)
chr1 (11-111)||(21206919-21207019)
chr1 (11-150)||(24570530-24570670)
chr1 (11-111)||(45049538-45049638)
chr1 (73-155)||(22364608-22364691)
chr1 (11-124)||(41392345-41392458)
chr1 (11-111)||(18603231-18603331)
chr1 (11-111)||(20117325-20117425)
chr1 (11-141)||(49965727-49965858)
chr1 (11-135)||(2423263-2423382)
chr1 (11-124)||(29136713-29136825)
chr1 (11-117)||(21716045-21716151)
chr1 (16-124)||(22033743-22033853)
chr1 (16-124)||(42449512-42449620)
chr1 (11-124)||(7642741-7642853)
chr1 (23-112)||(35524637-35524726)
chr1 (87-141)||(27331365-27331419)
chr1 (11-141)||(9786572-9786692)
chr1 (11-64)||(27331451-27331505)
[»] scaffold0195 (1 HSPs)
scaffold0195 (11-141)||(17147-17277)
[»] scaffold0039 (1 HSPs)
scaffold0039 (11-155)||(21602-21746)
[»] scaffold0483 (1 HSPs)
scaffold0483 (11-155)||(5081-5227)
[»] scaffold0383 (3 HSPs)
scaffold0383 (11-155)||(12177-12322)
scaffold0383 (11-141)||(4933-5066)
scaffold0383 (80-155)||(1-77)
[»] scaffold0222 (2 HSPs)
scaffold0222 (11-155)||(28184-28329)
scaffold0222 (11-155)||(28622-28767)
[»] scaffold0109 (1 HSPs)
scaffold0109 (11-155)||(49921-50067)
[»] scaffold0019 (1 HSPs)
scaffold0019 (11-155)||(184045-184190)
[»] scaffold0396 (2 HSPs)
scaffold0396 (11-150)||(15338-15479)
scaffold0396 (11-141)||(14413-14543)
[»] scaffold0384 (1 HSPs)
scaffold0384 (11-155)||(703-848)
[»] scaffold1140 (1 HSPs)
scaffold1140 (11-155)||(919-1065)
[»] scaffold0465 (1 HSPs)
scaffold0465 (11-155)||(11489-11635)
[»] scaffold0303 (1 HSPs)
scaffold0303 (11-155)||(7520-7665)
[»] scaffold0207 (1 HSPs)
scaffold0207 (11-155)||(54-200)
[»] scaffold0138 (2 HSPs)
scaffold0138 (11-138)||(15521-15648)
scaffold0138 (11-155)||(26052-26197)
[»] scaffold0012 (1 HSPs)
scaffold0012 (11-155)||(249629-249775)
[»] scaffold0011 (5 HSPs)
scaffold0011 (16-135)||(129325-129444)
scaffold0011 (11-122)||(72590-72701)
scaffold0011 (11-122)||(76971-77082)
scaffold0011 (11-155)||(192389-192535)
scaffold0011 (97-141)||(257084-257128)
[»] scaffold0009 (3 HSPs)
scaffold0009 (11-141)||(269932-270063)
scaffold0009 (11-134)||(235819-235941)
scaffold0009 (88-134)||(236120-236166)
[»] scaffold0253 (2 HSPs)
scaffold0253 (11-155)||(10122-10267)
scaffold0253 (11-155)||(19547-19692)
[»] scaffold0529 (1 HSPs)
scaffold0529 (11-155)||(407-552)
[»] scaffold0447 (2 HSPs)
scaffold0447 (11-155)||(14182-14327)
scaffold0447 (11-141)||(2069-2202)
[»] scaffold0413 (1 HSPs)
scaffold0413 (11-155)||(10041-10186)
[»] scaffold0092 (1 HSPs)
scaffold0092 (11-155)||(13342-13487)
[»] scaffold0078 (2 HSPs)
scaffold0078 (11-122)||(36027-36138)
scaffold0078 (11-124)||(39723-39836)
[»] scaffold0003 (2 HSPs)
scaffold0003 (11-155)||(217870-218016)
scaffold0003 (11-124)||(4825-4938)
[»] scaffold0022 (2 HSPs)
scaffold0022 (11-150)||(7272-7412)
scaffold0022 (11-150)||(59559-59699)
[»] scaffold0102 (2 HSPs)
scaffold0102 (11-155)||(46065-46209)
scaffold0102 (11-141)||(37368-37498)
[»] scaffold0034 (1 HSPs)
scaffold0034 (11-155)||(77204-77346)
[»] scaffold0026 (2 HSPs)
scaffold0026 (11-155)||(26775-26920)
scaffold0026 (11-150)||(66632-66772)
[»] scaffold0597 (1 HSPs)
scaffold0597 (11-155)||(3340-3484)
[»] scaffold0139 (1 HSPs)
scaffold0139 (11-156)||(17328-17474)
[»] scaffold2147 (1 HSPs)
scaffold2147 (11-155)||(148-294)
[»] scaffold0225 (2 HSPs)
scaffold0225 (11-155)||(14200-14345)
scaffold0225 (11-129)||(27724-27841)
[»] scaffold0032 (1 HSPs)
scaffold0032 (11-155)||(53552-53697)
[»] scaffold1388 (1 HSPs)
scaffold1388 (16-155)||(1624-1764)
[»] scaffold0218 (1 HSPs)
scaffold0218 (21-122)||(7369-7470)
[»] scaffold0058 (1 HSPs)
scaffold0058 (11-155)||(53744-53889)
[»] scaffold0244 (1 HSPs)
scaffold0244 (11-155)||(24548-24692)
[»] scaffold0049 (2 HSPs)
scaffold0049 (11-123)||(44038-44150)
scaffold0049 (11-135)||(30257-30382)
[»] scaffold0130 (1 HSPs)
scaffold0130 (11-155)||(30720-30865)
[»] scaffold0104 (1 HSPs)
scaffold0104 (11-155)||(50928-51074)
[»] scaffold0315 (1 HSPs)
scaffold0315 (11-155)||(20360-20507)
[»] scaffold0158 (1 HSPs)
scaffold0158 (11-141)||(15980-16110)
[»] scaffold0266 (2 HSPs)
scaffold0266 (11-120)||(13314-13422)
scaffold0266 (22-120)||(5726-5823)
[»] scaffold0106 (1 HSPs)
scaffold0106 (17-122)||(27872-27979)
[»] scaffold1610 (1 HSPs)
scaffold1610 (11-155)||(348-493)
[»] scaffold1605 (1 HSPs)
scaffold1605 (11-155)||(1086-1231)
[»] scaffold0234 (1 HSPs)
scaffold0234 (11-155)||(19722-19868)
[»] scaffold0302 (1 HSPs)
scaffold0302 (11-129)||(3733-3851)
[»] scaffold0043 (1 HSPs)
scaffold0043 (11-105)||(83742-83836)
[»] scaffold0068 (1 HSPs)
scaffold0068 (10-141)||(59475-59606)
[»] scaffold0008 (5 HSPs)
scaffold0008 (11-135)||(130339-130463)
scaffold0008 (23-135)||(133933-134045)
scaffold0008 (11-141)||(20485-20614)
scaffold0008 (11-141)||(28060-28189)
scaffold0008 (50-124)||(33994-34068)
[»] scaffold0498 (1 HSPs)
scaffold0498 (11-122)||(12177-12287)
[»] scaffold0077 (1 HSPs)
scaffold0077 (11-141)||(24845-24976)
[»] scaffold0120 (2 HSPs)
scaffold0120 (11-121)||(29796-29905)
scaffold0120 (105-141)||(26575-26611)
[»] scaffold0028 (1 HSPs)
scaffold0028 (33-141)||(91290-91399)
[»] scaffold0191 (1 HSPs)
scaffold0191 (11-122)||(970-1081)
[»] scaffold0037 (3 HSPs)
scaffold0037 (11-118)||(90346-90453)
scaffold0037 (11-134)||(26930-27053)
scaffold0037 (10-141)||(66853-66984)
[»] scaffold0021 (2 HSPs)
scaffold0021 (11-141)||(138935-139065)
scaffold0021 (11-141)||(76195-76325)
[»] scaffold0269 (1 HSPs)
scaffold0269 (16-140)||(2660-2785)
[»] scaffold0083 (1 HSPs)
scaffold0083 (21-135)||(12111-12225)
[»] scaffold0367 (1 HSPs)
scaffold0367 (11-129)||(5606-5723)
[»] scaffold0113 (1 HSPs)
scaffold0113 (11-124)||(17531-17644)
[»] scaffold0091 (1 HSPs)
scaffold0091 (11-124)||(17998-18111)
[»] scaffold0141 (2 HSPs)
scaffold0141 (11-150)||(24797-24937)
scaffold0141 (11-150)||(20542-20682)
[»] scaffold0467 (1 HSPs)
scaffold0467 (23-120)||(12200-12297)
[»] scaffold0017 (1 HSPs)
scaffold0017 (11-129)||(41695-41812)
[»] scaffold1148 (1 HSPs)
scaffold1148 (11-124)||(125-238)
[»] scaffold0251 (1 HSPs)
scaffold0251 (11-124)||(16099-16212)
[»] scaffold0184 (1 HSPs)
scaffold0184 (11-124)||(33008-33121)
[»] scaffold0107 (1 HSPs)
scaffold0107 (11-124)||(29245-29358)
[»] scaffold0647 (1 HSPs)
scaffold0647 (11-150)||(8669-8809)
[»] scaffold0622 (1 HSPs)
scaffold0622 (11-141)||(7048-7180)
[»] scaffold0359 (1 HSPs)
scaffold0359 (11-141)||(14002-14131)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-111)||(37184-37284)
[»] scaffold0004 (2 HSPs)
scaffold0004 (54-141)||(198235-198322)
scaffold0004 (11-64)||(331362-331416)
[»] scaffold0692 (1 HSPs)
scaffold0692 (16-141)||(1564-1689)
[»] scaffold0124 (1 HSPs)
scaffold0124 (11-124)||(3726-3839)
[»] scaffold0450 (1 HSPs)
scaffold0450 (11-141)||(4988-5119)
[»] scaffold0240 (1 HSPs)
scaffold0240 (11-141)||(5452-5582)
[»] scaffold0892 (1 HSPs)
scaffold0892 (11-129)||(2190-2307)
[»] scaffold0181 (1 HSPs)
scaffold0181 (11-124)||(34430-34543)
[»] scaffold0462 (1 HSPs)
scaffold0462 (21-135)||(4048-4163)
[»] scaffold0480 (1 HSPs)
scaffold0480 (11-141)||(7544-7674)
[»] scaffold0103 (1 HSPs)
scaffold0103 (11-141)||(31380-31511)
[»] scaffold0395 (1 HSPs)
scaffold0395 (11-141)||(13590-13723)
[»] scaffold0044 (1 HSPs)
scaffold0044 (11-124)||(67578-67691)
[»] scaffold0007 (1 HSPs)
scaffold0007 (11-124)||(87052-87165)
[»] scaffold0434 (1 HSPs)
scaffold0434 (11-119)||(2535-2643)
[»] scaffold0270 (1 HSPs)
scaffold0270 (11-95)||(24259-24343)
[»] scaffold0115 (1 HSPs)
scaffold0115 (11-111)||(697-797)
[»] scaffold2007 (1 HSPs)
scaffold2007 (11-64)||(1-54)
[»] scaffold0673 (1 HSPs)
scaffold0673 (68-141)||(4272-4345)
[»] scaffold0010 (1 HSPs)
scaffold0010 (11-124)||(139272-139384)
[»] scaffold1124 (1 HSPs)
scaffold1124 (18-110)||(1500-1591)
[»] scaffold0316 (1 HSPs)
scaffold0316 (28-119)||(19974-20066)
[»] scaffold0031 (2 HSPs)
scaffold0031 (11-133)||(29932-30054)
scaffold0031 (21-118)||(68215-68312)
[»] scaffold0002 (1 HSPs)
scaffold0002 (11-62)||(391325-391376)
[»] scaffold0175 (2 HSPs)
scaffold0175 (11-60)||(13057-13106)
scaffold0175 (11-124)||(12835-12952)
[»] scaffold0155 (1 HSPs)
scaffold0155 (11-124)||(25416-25529)
[»] scaffold0342 (1 HSPs)
scaffold0342 (11-112)||(3690-3790)
[»] scaffold0226 (2 HSPs)
scaffold0226 (11-111)||(15548-15650)
scaffold0226 (11-107)||(24946-25044)
[»] scaffold0292 (4 HSPs)
scaffold0292 (11-64)||(8878-8932)
scaffold0292 (11-64)||(17327-17381)
scaffold0292 (87-134)||(8964-9011)
scaffold0292 (87-134)||(17413-17460)
[»] scaffold0501 (1 HSPs)
scaffold0501 (11-86)||(12094-12169)
[»] scaffold0247 (1 HSPs)
scaffold0247 (16-141)||(16699-16824)
[»] scaffold0051 (1 HSPs)
scaffold0051 (87-141)||(55866-55920)
[»] scaffold0190 (1 HSPs)
scaffold0190 (73-117)||(8058-8102)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 269556 - 269701
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  269556 cgaataatatatttattcatgaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 269655  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacatt 156  Q
    || ||||||||||| ||||||||||||||||| |||||||||||||    
T  269656 accagagtaatcaatatatacatgttatgaagcaataaattacatt 269701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 646365 - 646220
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  646365 cgaataatatatttattcatgaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 646266  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacatt 156  Q
    || ||||||||||| ||||||||||||||||| |||||||||||||    
T  646265 accagagtaatcaatatatacatgttatgaagcaataaattacatt 646220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 832100 - 831955
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  832100 cgaataatatatttattcatgaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 832001  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacatt 156  Q
    || ||||||||||| ||||||||||||||||| |||||||||||||    
T  832000 accagagtaatcaatatatacatgttatgaagcaataaattacatt 831955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 6776821 - 6776676
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  6776821 cgaataatacatgtattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacggtcgcagcggaatataa 6776722  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||  |||| |||||||||||||||| |||||||||||||    
T  6776721 actagagtaaattcaa-atatacatgttatgaataaataaattacat 6776676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 24109053 - 24108924
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||    
T  24109053 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccaataaacatgtatataaacctcaacaatcgcagcggaatataa 24108955  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||||||||||||||||||||||    
T  24108954 accagagtaatcaacatatacatgttatgaa 24108924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 24719911 - 24719781
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  24719911 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 24719812  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    |||||||||||| | |||||||||| |||||    
T  24719811 actagagtaatccaaatatacatgtcatgaa 24719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 24387973 - 24387827
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||    
T  24387973 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaagctcaacagttgcagcggaatgtaa 24387874  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| |||||  ||||||||||||    
T  24387873 accagagtaatcaaaatatgtacatgtcatgaatcaataaattacat 24387827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 28835580 - 28835725
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  28835580 cgaataatacatttattcaagaaatagaggctacgccacattcaaaatttaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 28835679  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |  |||||||  |||| |||||||||||||||| |||||||||||||    
T  28835680 atcagagtaaattcaa-atatacatgttatgaataaataaattacat 28835725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 29758179 - 29758325
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  29758179 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaaaaacatgtatataaacctcaacagttgcagcggaatataa 29758278  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||| ||||    
T  29758279 accagagtaatccaaatatatacatgtcatgaatcaataaatcacat 29758325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 43375867 - 43375726
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||    
T  43375867 aatatatttattcaataaatagaggttacgccacattcaaaattcaaaaaccaataagcatgtatataaacctcaacagttgcagcggaatataaaccag 43375768  T
Q  116 agtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    ||||||||| |||  ||||||| |||||  ||||||||||||    
T  43375767 agtaatcaaaatatgtacatgtcatgaatcaataaattacat 43375726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 22008944 - 22008801
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||||||||    
T  22008944 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacgtgtatataaacctcaatagtcgcagcggaatataa 22008845  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattac 153  Q
    || |||||||  |||| |||||||||||||||| |||||||||||    
T  22008844 accagagtaaattcaa-atatacatgttatgaataaataaattac 22008801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 16043642 - 16043497
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||    
T  16043642 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaagtcaataaacatgtatataaacctcaacagtcgcagcggaatataa 16043543  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  16043542 accagagtaaattcaa-atatacatgttatgaataaataaattacat 16043497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 23508672 - 23508817
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  23508672 cgaataatacatttattcaataaatagaggatacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 23508771  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  23508772 accagagtaaattcaa-atatacatgttatgaataaataaattacat 23508817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 41509885 - 41509776
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  41509885 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 41509786  T
Q  111 actagagtaa 120  Q
    || |||||||    
T  41509785 accagagtaa 41509776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 16416152 - 16416289
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  16416152 cgaataatacatttattcaagaaataaaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaatagtcgcagcggaatataa 16416251  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataa 148  Q
    || | | ||||| | |||||||||| ||||| ||||||    
T  16416252 accaaaataatccaaatatacatgtcatgaataaataa 16416289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 13665125 - 13664995
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13665125 cgaataatacatttattcaagaaatagaggctatgccatattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 13665026  T
Q  111 actagagtaa--tcaacatatacatgttatga 140  Q
    || |||||||  |||| |||||||||||||||    
T  13665025 accagagtaaattcaa-atatacatgttatga 13664995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 13724400 - 13724270
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  13724400 cgaataatacatttattcaagaaatagaggctatgccatattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 13724301  T
Q  111 actagagtaa--tcaacatatacatgttatga 140  Q
    || |||||||  |||| |||||||||||||||    
T  13724300 accagagtaaattcaa-atatacatgttatga 13724270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 24931394 - 24931283
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  24931394 cgaataatacatttattcatgaaatagaggctacgccacattcaaaattcaaaagtcaataaacatgtatataaacctcaacagttgcagcggaatataa 24931295  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  24931294 accagagtaatc 24931283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 3434119 - 3433973
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca-aaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  3434119 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaccattaaacatgtatataaacctcaatagtcgcagcggaatata 3434020  T
Q  110 aactagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||| |||| |  |||||||||||||||  ||||||||||||    
T  3434019 aaccagagtaaatccaagtatacatgttatgaatcaataaattacat 3433973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 17343080 - 17343224
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  17343080 cgaataatacatttattcaagaaatagaggttacgctactttcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 17343179  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattaca 154  Q
    |  |||||||  |||| |||||||||||||||| ||||||||||||    
T  17343180 atcagagtaatttcaa-atatacatgttatgaataaataaattaca 17343224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 23631569 - 23631424
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||||||||||||    
T  23631569 cgaataatacatttattcaagaaatagaggcaacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacagtcgtagcggaatataa 23631470  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |  ||||| |||| |  |||||||||||||||  ||||||||||||    
T  23631469 atcagagtaaatccaagtatacatgttatgaatcaataaattacat 23631424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 22909928 - 22909785
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||    
T  22909928 cgaataatacatatattcaagaaaaagaggctacgcaacattcaaaattcaaaaaccaataaacatgtatataaacctcaac--tcgcagcggaatataa 22909831  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||  |||| |||||||||||| |||  ||||||||||||    
T  22909830 actagagtaaattcaa-atatacatgttacgaatcaataaattacat 22909785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 24547076 - 24547189
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||||||    
T  24547076 cgaataatacatttatttaagaaatagaggctacgtcacattcaaaattcaaaaaccaataaacatgtatataaacttcaacaatcgcagcggaatataa 24547175  T
Q  111 actagagtaatcaa 124  Q
    || ||||| |||||    
T  24547176 accagagtgatcaa 24547189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 41243561 - 41243686
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||||||||||||| | | |||||||||||| |||||| |||||||||||||| |||||||| |||||||||||||||| |    
T  41243561 aatacatttattcaagaaatagaggctacgccatcgtacaaaattcaaaa-ccaataaacatgtatataaacttcaacagtcgcagcggaatataaacca 41243659  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    |||||||  | |||||||||| |||||    
T  41243660 gagtaattcaaatatacatgtcatgaa 41243686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 17148495 - 17148382
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  17148495 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaacagttgcagtggaatataa 17148396  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17148395 atcagagtgatcaa 17148382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 273464 - 273351
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  273464 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 273365  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  273364 atcagagtgatcaa 273351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 642385 - 642498
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  642385 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 642484  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  642485 atcagagtgatcaa 642498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 9950793 - 9950666
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||  ||||||||||||||||||||||   ||| |||||||    
T  9950793 cgaataatacatttattcaagaaatagaggctacgccatcatccaaaattc-aaaaccaataagcatgtatataaacctcaacagt---agcagaatata 9950698  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  9950697 aaccagagtaatccaaatatacatgtcatgaa 9950666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 25120353 - 25120483
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  ||||||| || | |||||||||||| |||||||| |||||||||||||    
T  25120353 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaacca-taaatatgtatataaacttcaacagtcgcagcggaatata 25120451  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  25120452 aacaagagtaatccaaatatacatgtcatgaa 25120483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 22090707 - 22090594
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  22090707 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 22090608  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  22090607 atcagagtgatcaa 22090594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 225435 - 225295
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||    
T  225435 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacgatagacatgtatgtaaatctcaacagttacagcggaatataa 225336  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  225335 atcagagtgatcgaatatatacatgtcatgagcaaataaat 225295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 739058 - 738918
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||    
T  739058 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacgatagacatgtatgtaaatctcaacagttacagcggaatataa 738959  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  738958 atcagagtgatcgaatatatacatgtcatgagcaaataaat 738918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 862953 - 862813
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | |||||||||||| |||| |||||||||| |||||||||||||    
T  862953 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacgatagacatgtatgtaaatctcaacagttacagcggaatataa 862854  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  862853 atcagagtgatcgaatatatacatgtcatgagcaaataaat 862813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 15321319 - 15321211
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||  ||    
T  15321319 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaaatcag 15321220  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  15321219 agtgatcaa 15321211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 15501688 - 15501580
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |||  ||    
T  15501688 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaaatcag 15501589  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  15501588 agtgatcaa 15501580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 16204558 - 16204416
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |   ||||||  | ||||||||||||| ||||||||||||||||||||| ||    
T  16204558 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaattcgaaaccatga-acatgtatataaaactcaacagttgcagcggaatagaa 16204460  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaatta 152  Q
    || ||||| |||  || || ||||||| |||||  |||||||||    
T  16204459 accagagtgatccaaatatgtacatgtcatgaatcaataaatta 16204416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 43683548 - 43683688
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||||    
T  43683548 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaactgatagacatgtatgtaaaccttaacagttacagcggaatataa 43683647  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  43683648 atcagagtgatcaaatatatacatgtcatgagcaaataaat 43683688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 16041910 - 16041821
Alignment:
Q  67 caatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||  |||| |||||||||||||||| |||||||||||||    
T  16041910 caataaacatgtatataaacctcaacagtcgcagcggaatataaaccagagtaaattcaa-atatacatgttatgaataaataaattacat 16041821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 20479505 - 20479635
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||| ||||||||    
T  20479505 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagtggaatata 20479603  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |  ||| ||||||||||||||| |||||    
T  20479604 aaccatggtactcaacatatacatgtcatgaa 20479635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 5236090 - 5236203
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| |||| |||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  5236090 cgaataatacatttattcaataaattgagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 5236189  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  5236190 atcagagtgatcaa 5236203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21854158 - 21854046
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||    
T  21854158 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaa-ccgttagacatgtatataaacctcaacagttgcagcggaaaataa 21854060  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21854059 atcagagtgatcaa 21854046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 24663508 - 24663395
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||| ||| |||| ||| ||||||||||||||    
T  24663508 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatatgaacttcaatagtcgcagcggaatataa 24663409  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  24663408 atcagagtgatcaa 24663395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 30118187 - 30118300
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||| ||| |||| ||| ||||||||||||||    
T  30118187 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatatgaacttcaatagtcgcagcggaatataa 30118286  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  30118287 atcagagtgatcaa 30118300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 701848 - 701708
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | ||| |||||||| |||| |||||||||| |||||||||||||    
T  701848 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacgataaacatgtatgtaaatctcaacagttacagcggaatataa 701749  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  701748 atcagagtgatcgaatatatacatgtcatgagcaaataaat 701708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 16676597 - 16676497
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||| |||||||| | ||||||||||||| |||||||||||||    
T  16676597 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgataaacatgtatgtgaacctcaacagttacagcggaatataa 16676498  T
Q  111 a 111  Q
    |    
T  16676497 a 16676497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 1788536 - 1788406
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||||| ||||||    
T  1788536 cgaataatacatttattcaagaaatagaggctacgtcatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcgaaatata 1788438  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| | ||||||| | |||||||||| |||||    
T  1788437 aaccaaagtaatccaaatatacatgtcatgaa 1788406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 828191 - 828304
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || ||||| ||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||  |||||||||||||    
T  828191 cgaataatacatctattccagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagtancagcggaatataa 828290  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  828291 atcagagtgatcaa 828304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21846753 - 21846641
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| ||||||||  |||| |  ||||||||||||||| | | |||||||||||||||||||||||||||||||||||| ||||    
T  21846753 cgaataatacatttattcaacaaatagagattacgtcttattcaaaattcaaaatcga-tagacatgtatataaacctcaacagttgcagcggaaaataa 21846655  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21846654 atcagagtgatcaa 21846641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 21679061 - 21679181
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| |||||| || |||||||||||||||  | || || |||| ||||||| |||||||||  ||||||||||||||| ||||||    
T  21679061 atttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-aacaggcatgcatataaatctcaacagtcacagcggaatataaaccagagta 21679159  T
Q  120 atcaacatatacatgttatgaa 141  Q
     |||| | |||||||| |||||    
T  21679160 ctcaaaacatacatgtcatgaa 21679181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 22323797 - 22323672
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaacca-----atagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    ||||||| |||||||| |||||||| ||||| |||| ||||||| | |     ||| |||||||||||||| |||||||| |||||||||||||||| ||    
T  22323797 atttatttaagaaataaaggctacgtcacatacaaatttcaaaaccaataaacataaacatgtatataaacttcaacagtcgcagcggaatataaaccag 22323698  T
Q  116 agtaatcaacatatacatgttatgaa 141  Q
    ||| ||| | |||||||||| |||||    
T  22323697 agtgatccaaatatacatgtcatgaa 22323672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 9951287 - 9951193
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaa 105  Q
    |||| |||| |||||||||||||||| |||||||| || ||| |||||||||||| ||||||  |||||||||||||||||||| | |||||||||    
T  9951287 cgaataatacatttattcaagaaataaaggctacgtcatcatccaaaattcaaaa-ccaataagcatgtatataaacctcaacattagcagcggaa 9951193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 275944 - 275986
Alignment:
Q  155 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  275944 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 275986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 639905 - 639863
Alignment:
Q  155 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  639905 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 639863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 825711 - 825669
Alignment:
Q  155 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  825711 ttgcacaagcatccttgtcgttcaaatatggccgcaaactctc 825669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 16875195 - 16875096
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa---tagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||| |||||  ||   ||||||||||| ||||||||||||||| ||||||||||    
T  16875195 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattaaaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaata 16875096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 20569159 - 20569035
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | |||| || ||  ||||| |  ||||||| || |||||| ||||||| |||||||| |||| ||||||||    
T  20569159 cgaataatacatttattcaagaaatagatgttacgtcatcacacaaaaattcaaaacca-taaacatgtgtataaacttcaacagtcgcagtggaatata 20569061  T
Q  110 aactagagtaatcaacatatacatgt 135  Q
    ||| |||||| |||| ||||||||||    
T  20569060 aacgagagtactcaaaatatacatgt 20569035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 20575352 - 20575228
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | |||| || ||  ||||| |  ||||||| || |||||| ||||||| |||||||| |||| ||||||||    
T  20575352 cgaataatacatttattcaagaaatagatgttacgtcatcacacaaaaattcaaaacca-taaacatgtgtataaacttcaacagtcgcagtggaatata 20575254  T
Q  110 aactagagtaatcaacatatacatgt 135  Q
    ||| |||||| |||| ||||||||||    
T  20575253 aacgagagtactcaaaatatacatgt 20575228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 19995467 - 19995418
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||    
T  19995467 aatacatttgttcaagaaatagaggctacgccatcattcaaaattcaaaa 19995418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 20656331 - 20656225
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | |||| || ||| ||||| |  ||||||| || |||| ||||||||| |||||||| | |||||||||||    
T  20656331 cgaataatacatttattcaagaaatagatgttacgtcatcatacaaaaattcaaaacca-taaacatatatataaacttcaacagtcgtagcggaatata 20656233  T
Q  110 aactagag 117  Q
    ||| ||||    
T  20656232 aaccagag 20656225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 19995386 - 19995332
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||| |||||||||||||||| ||||||||  | |||||||||| |||||    
T  19995386 ctcaacagtcgcagcggaatataaaccagagtaatacaaatatacatgtcatgaa 19995332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 19985467 - 19985328
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  19985467 aatacatttattcaggaaatagaggctacaccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgtagcggaatataaaccag 19985368  T
Q  116 agtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  19985367 agtaatcaacatatacatgttatgaagcaataaattacat 19985328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 35018038 - 35017908
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||    
T  35018038 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaacaataaacatgtatacaaacctcaacagttgcagcggaatataa 35017939  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||||||||||||||||||||||    
T  35017938 accagagtaatcaacatatacatgttatgaa 35017908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 13623516 - 13623372
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  13623516 cgaataatacatttattcaagaaatagaggctatgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcaacggaatataa 13623417  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    |  ||||||||||| ||||||||||||||||  ||||||||||||    
T  13623416 aacagagtaatcaatatatacatgttatgaatcaataaattacat 13623372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 25954644 - 25954499
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  25954644 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 25954545  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  25954544 accagagtaaattcaa-atatacatgttatgaataaataaattacat 25954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 11214042 - 11214188
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11214042 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgatagacatgtatataaacctcaacagttgcagcggaatataa 11214141  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||| ||||||| |||  ||||||| ||||| | |||||| ||||    
T  11214142 accagattaatcaaaatatgtacatgtcatgaacagataaatcacat 11214188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 16235369 - 16235514
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16235369 cgaataatacatttattcaagaaatagaggctacgcgacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 16235468  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||||||||||||||||  ||||||||||||    
T  16235469 accagagtaaattcaa-atatacatgttatgaatcaataaattacat 16235514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18740265 - 18740410
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  18740265 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccaataaacatgtatataaacctcaacagttgcagcggaatataa 18740363  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||||||||    
T  18740364 accagagtaatcaaaatatatacatgtcatgaatcaataaattacat 18740410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 33317005 - 33316860
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  33317005 cgaataatacatttattcaagaaatagaggctacgccacattcaaaactcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 33316906  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  33316905 accagagtaaattcaa-atatacatgttatgaataaataaattacat 33316860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18578434 - 18578579
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  18578434 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaacaataaacatgtatataaacctcaacagtcgcagcggaatataa 18578533  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  ||||  |||||||||||||||  ||||||||||||    
T  18578534 accagagtaaattcaa-ttatacatgttatgaatcaataaattacat 18578579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 18835942 - 18835796
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||    
T  18835942 tcgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacaatcgcagtggaatata 18835843  T
Q  110 aactagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||| |||| |  |||||||||||||||  ||||||||||||    
T  18835842 aaccagagtaaatccaagtatacatgttatgaatcaataaattacat 18835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 16828399 - 16828255
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||  |||||||| ||||||||||||||    
T  16828399 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattc-aaaaccaataaacatgtatataaaattcaacagtcgcagcggaatataa 16828301  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  16828300 accagagtaaattcaa-atatacatgttatgaataaataaattacat 16828255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 4988587 - 4988733
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattc-aaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||     
T  4988587 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatatt 4988686  T
Q  110 aactagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||| |||| |  |||||||||||||||  ||||||||||||    
T  4988687 aaccagagtaaatccaagtatacatgttatgaatcaataaattacat 4988733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 3142965 - 3143074
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  3142965 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 3143064  T
Q  111 actagagtaa 120  Q
    || |||||||    
T  3143065 accagagtaa 3143074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 18844297 - 18844152
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  18844297 cgaataatacatttattcatgaaatagaggctacgccacattcaaaactcaaaaaccaataaacatgtatataaacctcaacaatcgcagcggaatataa 18844198  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  18844197 accagagtaaatccaagtatacatgttatgaatcaataaattacat 18844152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 23975303 - 23975452
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacc----aatagacatgtatataaacctcaacagttgcagcggaat 106  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||    |||| ||||||||||||||||||||||| ||||||||||    
T  23975303 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaacccaattaataaacatgtatataaacctcaacagtcgcagcggaat 23975402  T
Q  107 ataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||| |||||||  ||||  ||||||||||||||| |||||||||||||    
T  23975403 ataaaccagagtaaattcaa-ttatacatgttatgaataaataaattacat 23975452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 13017079 - 13016960
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |||||||||||||||  |||||||    
T  13017079 atttattcaagaaatagaggctacgccacattcaaaattcaaaaacc-ataaacatgtatgtaaacctcaacagtcgcagcggaatataaatcagagtaa 13016981  T
Q  121 tcaacatatacatgttatgaa 141  Q
    || | | ||||||||||||||    
T  13016980 tccaaaaatacatgttatgaa 13016960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 17787374 - 17787489
Alignment:
Q  25 attcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaa 124  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| |    
T  17787374 attcaagaaatagaggctacaccacattcaaaattcaaaaacca-taaacatgtatataaacctcaacagtcgcagcggaatataaaccagagtaatcca 17787472  T
Q  125 catatacatgttatgaa 141  Q
     |||||||||| |||||    
T  17787473 aatatacatgtcatgaa 17787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 14628955 - 14628811
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||| ||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||    
T  14628955 cgaataatacatttattcaagaa-tagaggctacgtcacattcgaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcagaatataa 14628857  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  14628856 acaagagtaaattcaa-atatacatgttatgaataaataaattacat 14628811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 25647135 - 25647005
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||    
T  25647135 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaattcaaaa-ccaataaacatgtatataaacttcaacagttgcagtggaatata 25647037  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | ||||||||||||||||    
T  25647036 aaccagagtaatccaaatatacatgttatgaa 25647005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 23151323 - 23151453
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||  || |||||||||||||||||||||| |||||||||||||    
T  23151323 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaaaccataag-catgtatataaacctcaacagtcgcagcggaatata 23151421  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||| |||| | |||||||||| |||||    
T  23151422 aaccagagcaatccaaatatacatgtcatgaa 23151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 18775120 - 18775250
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||||||||||||||||||||||||||||| || ||| ||||| | |||||||| || ||||||||||||||||||||||| |||||||||||||    
T  18775120 cgaataatatatttattcaagaaatagaggctacgtcatcatacaaaaataaaaaacca-taaacatgtatataaacctcaacagtcgcagcggaatata 18775218  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| |||||||||| |||||    
T  18775219 aaccagagtactcaaaatatacatgtcatgaa 18775250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 31626347 - 31626477
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||  | ||| |||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||    
T  31626347 cgaataatacatttattcaagaaatagaggctacgttatcatccaaaattcaaaa-ccaataaacatgtatataaatctcaacagtcgcagcggaatata 31626445  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| ||||||||||||||| |||||    
T  31626446 aaccagagtactcaacatatacatgtcatgaa 31626477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 1659961 - 1659844
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| || |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||    
T  1659961 cgaataatacatttattcaagaaatagaggttatgccacattcaaaattcaaaa-cggatagacatgtatataaacctcaacagttacagcggaatataa 1659863  T
Q  111 actagagtaatcaacatat 129  Q
    | |||||| ||||| ||||    
T  1659862 attagagtgatcaaaatat 1659844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 16104466 - 16104574
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| ||||||||||||||||||||| |||| |  |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16104466 cgaataatacatttattcaaaaaatagaggctacgccacattaaaaaattcaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 16104565  T
Q  111 actagagta 119  Q
    || ||||||    
T  16104566 accagagta 16104574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 18421726 - 18421857
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||| ||| ||| ||||| |  |||||||||| ||||||||||||| |||||||||||||||||||||||    
T  18421726 cgaataatacatttattcaagaaatagaggctacaccatcatacaaaaattcaaaaccaataaacatgtatataaatctcaacagttgcagcggaatata 18421825  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| | ||||||| | |||||||||| |||||    
T  18421826 aaccaaagtaatccaaatatacatgtcatgaa 18421857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 19608320 - 19608433
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  19608320 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaatctcaacagtcgcagcggaatataa 19608419  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  19608420 ataagagtgatcaa 19608433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 18089054 - 18088954
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  18089054 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaactgatagacatgtatataaacctcaacagtcgcagcggaatataa 18088955  T
Q  111 a 111  Q
    |    
T  18088954 a 18088954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 25173123 - 25173223
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  25173123 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaacagttacagcggaatataa 25173222  T
Q  111 a 111  Q
    |    
T  25173223 a 25173223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 10486778 - 10486892
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    ||||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |    
T  10486778 tcgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaataca 10486877  T
Q  110 aactagagtaatcaa 124  Q
    || |||||| |||||    
T  10486878 aattagagtgatcaa 10486892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 937386 - 937273
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  937386 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 937287  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  937286 atcagagtgatcaa 937273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 15860660 - 15860772
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||| |||||||| |||||||||| |||||  ||||||||||||||||||||||||||||  |||||||||||||  ||    
T  15860660 aatacatttattcaagaaatagaggttacgccactttcaaaattc-aaaacggatagacatgtatataaacctcaacagttatagcggaatataaatcag 15860758  T
Q  116 agtaatcaacatat 129  Q
    ||| ||||| ||||    
T  15860759 agtgatcaaaatat 15860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 16229481 - 16229594
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16229481 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16229580  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16229581 atcagagtgatcaa 16229594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16378547 - 16378434
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16378547 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16378448  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16378447 atcagagtgatcaa 16378434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16385871 - 16385758
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16385871 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16385772  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16385771 atcagagtgatcaa 16385758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 29871738 - 29871598
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| ||    
T  29871738 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaactgttacagcggaatacaa 29871639  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || ||||||||| |||||  ||||||||    
T  29871638 atcagagtgatcaaatatatacatgctatgagcaaataaat 29871598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 1652228 - 1652115
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||||    
T  1652228 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagtggaatataa 1652129  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  1652128 atcagagtgatcaa 1652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 9480313 - 9480200
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  9480313 cgaataatacatttattcaagaaatagagattacatcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 9480214  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  9480213 atcagagtgatcaa 9480200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16646143 - 16646030
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  16646143 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 16646044  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16646043 atcagagtgatcaa 16646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16651509 - 16651396
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  16651509 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 16651410  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16651409 atcagagtgatcaa 16651396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21787222 - 21787109
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||    
T  21787222 cgaataatacatttattcaagaaatagagtttacgtcttattcaaaattcaaaaactgatagacatgtatgtaaacctcaacagttacagcggaatataa 21787123  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21787122 atcagagtgatcaa 21787109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 25746539 - 25746438
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccaca-ttcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||| ||||||| | ||||||||||||||||||  | |||||||||||||| |||||||| |||||||||||||    
T  25746539 cgaataatacatttattcaagaaatagaggttacgccataattcaaaattcaaaaaccacaa-acatgtatataaacatcaacagtcgcagcggaatata 25746441  T
Q  110 aac 112  Q
    |||    
T  25746440 aac 25746438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23986941 - 23987054
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||| ||    
T  23986941 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaactgatagacatgtatgtaaacctcaacagttacagcggaatacaa 23987040  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  23987041 atcagagtgatcaa 23987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 27656348 - 27656248
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  |  |||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||||    
T  27656348 cgaataatacatttattcaagaaatagagattacatcttattcaaaattcaaaaaccgacagacatgtatataaacctcaatagctgcagcggaatataa 27656249  T
Q  111 a 111  Q
    |    
T  27656248 a 27656248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 2182096 - 2182014
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca--aaaaccaatagacatgtatataaacctcaa 91  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||   |||||||||||||||||||    
T  2182096 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaaccaaataacatgtatataaacctcaa 2182014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 22428201 - 22428331
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||| ||| |||||||||||||||| | |||| |||||| ||||||| |||||| | |||||||||||||    
T  22428201 cgaataatacatttattcaagaaatagaggctacaccatcattcaaaattcaaaatc-aataaacatgtgtataaacttcaacaatcgcagcggaatata 22428299  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    | | ||||||  | | |||||||||| |||||    
T  22428300 agccagagtacaccaaatatacatgtcatgaa 22428331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23162034 - 23162147
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||  |||||||||||| |||||| |||||||| |||||||||| ||    
T  23162034 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaactgatagacatgtatgtaaaccccaacagttacagcggaatacaa 23162133  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  23162134 atcagagtgatcaa 23162147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 26087669 - 26087782
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| |||||||||||  |||| |  |||||||||||||||||| |||||||| ||||| ||| |||||||| | ||||||||||||    
T  26087669 cgaataatacatttatttaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatatatatgaacttcaacagtcgtagcggaatataa 26087768  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  26087769 atcagagtgatcaa 26087782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 18005419 - 18005375
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaa 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18005419 atttattcaagaaatagaggctacgccacattcaaaattcaaaaa 18005375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 18005376 - 18005303
Alignment:
Q  83 aaacctcaacagttgcagcggaatataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||||| |||||||||||||||| |||||||  |||| |||||||||||||||| |||||||||||||    
T  18005376 aaacctcaacagtcgcagcggaatataaaccagagtaaattcaa-atatacatgttatgaataaataaattacat 18005303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 18396789 - 18396909
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||  || |||||||||||||||  | || | ||||| ||||||| ||||| ||| |||||||||||||    
T  18396789 cgaataatacatttattcaagaaatagatgctacatcatcattcaaaattcaaactc-aacatacatgcatataaatctcaatagtcgcagcggaatata 18396887  T
Q  110 aactagagtaatcaacatatac 131  Q
    |||  ||||| |||| ||||||    
T  18396888 aacctgagtactcaaaatatac 18396909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 22227882 - 22227831
Alignment:
Q  73 acatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaa 124  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||| |||||    
T  22227882 acatgtatataaacttcaacagttgcagcggaatataaatcagagtgatcaa 22227831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 22866037 - 22866148
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| |||||| || ||| |||||||| |||||||| || |||| ||||||| ||| ||| | | ||||||||||||||  |||||    
T  22866037 atttattcaagaaatagatgctacgtcatcatacaaaattc-aaaaccaaaag-catgcatataaatctcgacaatcgtagcggaatataaacccgagta 22866134  T
Q  120 atcaacatatacat 133  Q
    ||| | ||||||||    
T  22866135 atccaaatatacat 22866148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 32895889 - 32895938
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| ||||||||||||||||||||||||  || ||||||||||||||||    
T  32895889 aatacatttattcaagaaatagaggctacatcatcattcaaaattcaaaa 32895938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 18128013 - 18128061
Alignment:
Q  74 catgtatata-aacctcaacagttgcagcggaatataaactagagtaat 121  Q
    |||||||||| || ||||||||| |||||||||||||||| ||||||||    
T  18128013 catgtatatataatctcaacagtcgcagcggaatataaaccagagtaat 18128061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 30649 - 30793
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30649 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 30748  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||||||||||||||| |||||  ||||||||||||    
T  30749 accagagtaatcaacatatacatgtcatgaatcaataaattacat 30793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 15861467 - 15861323
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  15861467 cgaataatacatttattcaagaaatagaagctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 15861368  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||||||||||||||||||||||  ||||||||||||    
T  15861367 accagagtaatcaacatatacatgttatgaatcaataaattacat 15861323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 54043177 - 54043033
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||    
T  54043177 cgaataatacatttattcaagaaatagaggctacgccacactcaaaattcaaaaaccaataaacatgtatctaaacctcaacagttgcagcagaatataa 54043078  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||||||||||||||||||||||  ||||||||||||    
T  54043077 accagagtaatcaacatatacatgttatgaatcaataaattacat 54043033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19944408 - 19944551
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19944408 cgaataatacatttatttaagaaatagaggctacgccacattcaaa-ttcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 19944506  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    |  ||||||||||||||||||||||||||||| || |||||||||    
T  19944507 atcagagtaatcaacatatacatgttatgaagcaacaaattacat 19944551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22272634 - 22272779
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22272634 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 22272733  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  22272734 accagagtaaattcaa-atatacatgttatgaataaataaattacat 22272779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 16818647 - 16818792
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16818647 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 16818746  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||||||||||||||||  ||||||||||||    
T  16818747 accagagtaaattcaa-atatacatgttatgaatcaataaattacat 16818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 18906017 - 18905872
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  18906017 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 18905918  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||| ||||| |||||||||||||    
T  18905917 accagagtaaattcaa-atatacatgtcatgaataaataaattacat 18905872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18915813 - 18915958
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  18915813 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcacagcggaatataa 18915912  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  18915913 accagagtaaattcaa-atatacatgttatgaataaataaattacat 18915958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 45580741 - 45580882
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  45580741 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcagaatataaaccag 45580840  T
Q  116 agtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    |||||||  || || ||||||| |||||| ||||||||||||    
T  45580841 agtaatccaaatatgtacatgtcatgaagcaataaattacat 45580882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 16259235 - 16259380
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  16259235 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 16259334  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  16259335 accagagtaaatccaagtatacatgttatgaatcaataaattacat 16259380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18908280 - 18908425
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||||||||    
T  18908280 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaaaaacatgtatataaacctcaacagtcacagcggaatataa 18908379  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  18908380 accagagtaaattcaa-atatacatgttatgaataaataaattacat 18908425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14695397 - 14695537
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||    
T  14695397 aatacatttattcaagaaatagaggctacgccacattcaaaatttaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataaaccag 14695496  T
Q  116 agt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| |||| |  |||||||||||||||  ||||||||||||    
T  14695497 agtaaatccaagtatacatgttatgaatcaataaattacat 14695537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 2045215 - 2045326
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2045215 cgaataatacatttattcaagaaatagaggctacgccacatgcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 2045314  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  2045315 accagagtaatc 2045326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 2047944 - 2048055
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2047944 cgaataatacatttattcaagaaatagaggctacgccacatgcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 2048043  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  2048044 accagagtaatc 2048055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 38165821 - 38165967
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  38165821 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaaatcaataaacatgtatataaacatcaacagttgcagcggaatataa 38165920  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| |||||  ||||||||||||    
T  38165921 accagagtaatcaaaatatgtacatgtcatgaatcaataaattacat 38165967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 23490395 - 23490501
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||    
T  23490395 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataaatcag 23490494  T
Q  116 agtaatc 122  Q
    |||||||    
T  23490495 agtaatc 23490501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 7851279 - 7851424
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  7851279 cgaataatacatttattcaagaaatagaggctacgccatcatccaaaattcaaaaaccaataaacatgtatataaatctcaacagtcgcagcggaatata 7851378  T
Q  110 aactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||||||| | |||||||||| |||||  ||||||||||||    
T  7851379 aaccagagtaatccaaatatacatgtcatgaatcaataaattacat 7851424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 11812404 - 11812549
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||    
T  11812404 cgaataatacatttattcaagaaataggggctacgcaacattcaaaattcaaaaaccaataaacatgcatataaacctcaacagtcgcagcggaatacaa 11812503  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||||| |||| |  ||||||||||||||| |||||||||||||    
T  11812504 actagagtaaatccaagtatacatgttatgaataaataaattacat 11812549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 33339646 - 33339772
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||||||||||||||||||||    
T  33339646 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaac----atataaacctcaacagttgcagcggaatataa 33339741  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||||| |||||||||| |||||    
T  33339742 accagagtaatcaaaatatacatgtcatgaa 33339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 4948715 - 4948608
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| ||    
T  4948715 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgataaacatgtatataaacctcaacagttgcaacggaatataaaccag 4948616  T
Q  116 agtaatca 123  Q
    ||||||||    
T  4948615 agtaatca 4948608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 10736445 - 10736555
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  10736445 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccaataaacatgtatataaacctcaacagttgcagcggaatataa 10736543  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  10736544 accagagtaatc 10736555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 14846906 - 14846766
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||    
T  14846906 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccgatagacatgtatataaacatcaacagttacagcggaatataa 14846808  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  14846807 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 14846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 15470725 - 15470584
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  15470725 cgaataatacatttattcaagaaatagaagttacgccacattcaaaattcaaaaaccactagacatgtatataaacctcaacagttgcagcggaatgtaa 15470626  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||| ||||| |||  ||||||| ||||| ||||||||    
T  15470625 accagagtgatcaaaatatgtacatgtcatgaacaaataaat 15470584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 30140583 - 30140729
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac---caatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||    
T  30140583 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaata 30140682  T
Q  108 taaactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||| ||||||||| | ||||||| ||||||||  ||||||||||||    
T  30140683 taaaccagagtaatccaaatatacacgttatgaa-taataaattacat 30140729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 19573047 - 19572914
Alignment:
Q  24 tattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatc- 122  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||     
T  19573047 tattcaagaaatagaggttacgccacatgcaaaattcagaaaccaataaacatgtatataaacctcaacagttgcagcggaatataaaccagagtaatcc 19572948  T
Q  123 -aacatatacatgttatgaagaaataaattacat 155  Q
     || |||||||||| |||||  |||||| |||||    
T  19572947 aaatatatacatgtcatgaatcaataaactacat 19572914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 25056648 - 25056789
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||||||||    
T  25056648 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccgatagacatgtatgtaaacatcaacagttacagcggaatataa 25056747  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    |  ||||| ||||| |||  ||||||| ||||| ||||||||    
T  25056748 atcagagtgatcaaaatatgtacatgtcatgaacaaataaat 25056789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 38527481 - 38527611
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||| |||||||| |||||||||||||    
T  38527481 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaatc-aataaacatgtatataaacttcaacagtcgcagcggaatata 38527579  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  38527580 aaccagagtaatccagatatacatgtcatgaa 38527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 51160711 - 51160592
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaattca--aaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  51160711 ttattcaagaaatagaggctacgccacattcaaaattcaaaaaaaacaataaacatgtatataaacctcaacaatcgcaacggaatataaactagagtaa 51160612  T
Q  121 tcaacatatacatgttatgaa 141  Q
    || | |||||||||| |||||    
T  51160611 tcca-atatacatgtcatgaa 51160592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19229939 - 19230085
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||| | || ||||||||||||||||||| | |||||||||||||||||||||||| || ||||||||||    
T  19229939 cgaataatacatttattcaagaaatagaggttacacgactttcaaaattcaaaaaccaacaaacatgtatataaacctcaacagttacaacggaatataa 19230038  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| |||||  ||||||||||||    
T  19230039 accagagtaatccaaatatgtacatgtcatgaatcaataaattacat 19230085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 5225388 - 5225484
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||| |||||||||||||||| |||||||    
T  5225388 ttattcaagaaatagaggctacgccacattcaaaattcaaaaa-caataataatgtatataaacctcaacagtcgcagcggaatataaaccagagtaa 5225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 17059599 - 17059712
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  17059599 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcagcggaatataa 17059698  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17059699 atcagagtgatcaa 17059712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 12796328 - 12796466
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12796328 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaatagttgcagcggaatataa 12796427  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataa 148  Q
    |  ||||| ||| || |||||||||  ||||| ||||||    
T  12796428 atcagagtgatcaaatatatacatgccatgaacaaataa 12796466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 15573897 - 15574010
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15573897 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccaatagacatgtatgtaaacctcaacagttacagcggaatataa 15573996  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  15573997 atcagagtgatcaa 15574010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 44227318 - 44227431
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  44227318 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaatagttgcagcggaatataa 44227417  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  44227418 atcagagtgatcaa 44227431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 319874 - 319744
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||| |||||||||||||||| |||| ||||||||||| | |||| ||||||||||||||||||| ||| ||| |||||||||    
T  319874 cgaataatacatttattcaagcaatagaggctacgccatcattaaaaattcaaaa-ctaataaacatgtatataaacctcaatagtcgcatcggaatata 319776  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  319775 aaccagagtaatccaaatatacatgtcatgaa 319744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 1469914 - 1469801
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  1469914 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 1469815  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  1469814 atcagagtgatcaa 1469801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 2451828 - 2451715
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  2451828 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 2451729  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  2451728 atcagagtgatcaa 2451715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 12266760 - 12266648
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| | ||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  12266760 cgaataatacatttattcaagaaatagagattacgtctcat-caaaattcaaaaaccgatagacatgtatataaacctcaacagttgcaacggaatataa 12266662  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  12266661 atcagagtgatcaa 12266648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 15612916 - 15613029
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  15612916 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 15613015  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  15613016 atcagagtgatcaa 15613029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 30151229 - 30151342
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  30151229 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 30151328  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  30151329 atcagagtgatcaa 30151342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 53768553 - 53768666
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  53768553 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 53768652  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  53768653 atcagagtgatcaa 53768666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 6149065 - 6148935
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||||||||||||    
T  6149065 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatata 6148967  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||| | | |||||||||| |||||    
T  6148966 aaccagagtaaaccaaatatacatgtcatgaa 6148935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 6155657 - 6155527
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||||||||||||    
T  6155657 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatata 6155559  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||| | | |||||||||| |||||    
T  6155558 aaccagagtaaaccaaatatacatgtcatgaa 6155527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 13963623 - 13963510
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  13963623 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 13963524  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  13963523 atcagagtgatcaa 13963510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 17215594 - 17215481
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| ||  ||||    |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  17215594 cgaataatacatttattcaagaaatatagtttacgttttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagtttcagcggaatataa 17215495  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17215494 atcagagtgatcaa 17215481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 27838609 - 27838722
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| | ||| |||||||| ||||||||||||||    
T  27838609 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtattttaacttcaacagtcgcagcggaatataa 27838708  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  27838709 atcagagtgatcaa 27838722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 55314273 - 55314386
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  55314273 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 55314372  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  55314373 atcagagtgatcaa 55314386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 14296345 - 14296474
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacatt-caaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || | | |||||||||||| |  ||| |||||||||||||| ||||||||  ||||||||||||    
T  14296345 cgaataatacatttattcaagaaatagaggctacgtcatagtacaaaattcaaaacc--ataaacatgtatataaacttcaacagtcacagcggaatata 14296442  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||||  | | |||||||||| |||||    
T  14296443 aactagagtacaccaaatatacatgtcatgaa 14296474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 14301972 - 14302101
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacatt-caaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || | | |||||||||||| |  ||| |||||||||||||| ||||||||  ||||||||||||    
T  14301972 cgaataatacatttattcaagaaatagaggctacgtcatagtacaaaattcaaaacc--ataaacatgtatataaacttcaacagtcacagcggaatata 14302069  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||||  | | |||||||||| |||||    
T  14302070 aactagagtacaccaaatatacatgtcatgaa 14302101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 41268133 - 41268233
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  41268133 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 41268232  T
Q  111 a 111  Q
    |    
T  41268233 a 41268233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 8629671 - 8629816
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||  || ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||||||||||||    
T  8629671 cgaataatacatttattcaagaaatagaagctacatcatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtagcagcggaatata 8629769  T
Q  110 aactagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||| |||| |  |||||||||||||||  ||||||||||||    
T  8629770 aaccagagtaaatccaattatacatgttatgaatcaataaattacat 8629816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 8270667 - 8270524
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa---tagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||  |||| | |||||||||||||||||  ||   ||||||||||| ||||||||||||||| ||||||||||    
T  8270667 cgaataatacatttattcaagaaatagagattacgtctcattcaaaattcaaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaata 8270568  T
Q  108 taaactagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
     |||  ||||| ||| || |||||||||| ||||  ||||||||    
T  8270567 caaatcagagtgatcaaatatatacatgtcatgagcaaataaat 8270524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 13977899 - 13977786
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| ||||||||  |||| |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  13977899 cgaataatacatttattcaaaaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 13977800  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  13977799 atcagagtgatcaa 13977786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 45858912 - 45859025
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  45858912 cgaataatacatttattcaagaaatagagattacatcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 45859011  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  45859012 atcagagtgatcaa 45859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 8277777 - 8277662
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacca--atagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| | |||||||||||||||||  |  |||||||||||| ||||||||||||||| ||||||||||     
T  8277777 cgaataatacatttattcaagaaatagagattacgtctcattcaaaattcaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaatac 8277678  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  8277677 aaatcagagtgatcaa 8277662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 8306586 - 8306471
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacca--atagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| | |||||||||||||||||  |  |||||||||||| ||||||||||||||| ||||||||||     
T  8306586 cgaataatacatttattcaagaaatagagattacgtctcattcaaaattcaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaatac 8306487  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  8306486 aaatcagagtgatcaa 8306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 11694229 - 11694344
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaa--ccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||  || |||||||||||| ||||||||||||||| ||||||||||     
T  11694229 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatac 11694328  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  11694329 aaatcagagtgatcaa 11694344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 47787129 - 47786998
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || ||| |||||||  |||||||| |  |||| ||||||||||||||| | |||| ||||||||    
T  47787129 cgaataatacatttattcaagaaatagatgctacgtcatcatacaaaatttcaaaaccaacatgcatgcatataaacctcaacaatcgcagtggaatata 47787030  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| || | |||||||||| |||||    
T  47787029 aaccagagtactccaaatatacatgtcatgaa 47786998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 40937571 - 40937683
Alignment:
Q  21 atttattcaagaaatagaggctacg-ccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| |||||| ||  || |||||||| ||| ||||||  |||| ||||||| ||||||||| |||||||||||||||| ||||||    
T  40937571 atttattcaagaaatagatgctacgtccgaatacaaaattcgaaa-ccaataagcatgcatataaatctcaacagtcgcagcggaatataaaccagagta 40937669  T
Q  120 atcaacatatacat 133  Q
    ||| | ||||||||    
T  40937670 atccaaatatacat 40937683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 53900838 - 53900718
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    ||||||||||||||||||||||||| || ||| ||||| |  |||||||  | |||||||||||||| |||||||| |||||||||||||||| ||||||    
T  53900838 atttattcaagaaatagaggctacgtcatcatacaaaaattcaaaaccatga-acatgtatataaacttcaacagtcgcagcggaatataaaccagagta 53900740  T
Q  120 atcaacatatacatgttatgaa 141  Q
      | | |||||||||| |||||    
T  53900739 cgccaaatatacatgtcatgaa 53900718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 11199809 - 11199679
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| ||||||||||||||||||||||  |||| | || |||||||||||||||  | || |  |||| ||||||| ||||||||| ||| |||||||||    
T  11199809 cgaataatatatttattcaagaaataggtgctatgacatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgcaacggaatata 11199711  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    |||||||||| || | |||||||||| |||||    
T  11199710 aactagagtactccaaatatacatgtcatgaa 11199679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 13815554 - 13815634
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaa 91  Q
    |||| |||| |||||||||||||||||||| ||| ||| |||| ||||||||||| |||||| |||||||||||||||||||    
T  13815554 cgaataatacatttattcaagaaatagaggttacaccatcatttaaaattcaaaa-ccaataaacatgtatataaacctcaa 13815634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16746433 - 16746320
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||| |||||| |||||||||||||| ||  |||| ||| ||||||||||| ||    
T  16746433 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattccaaaaccgatagacatgtatatgaatttcaatagtcgcagcggaatacaa 16746334  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16746333 atcagagtgatcaa 16746320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16936235 - 16936122
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| ||  |||| |   ||||||||||||||||  |||||||||||| ||||||||||||||| || ||||||| ||    
T  16936235 cgaataatacatttattcaagaaatatagtttacgtctttttcaaaattcaaaaactgatagacatgtatgtaaacctcaacagttacatcggaatacaa 16936136  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16936135 atcagagtgatcaa 16936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 50114393 - 50114334
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaa 69  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  50114393 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaacccaa 50114334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 35121536 - 35121637
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||||||||||||||||||| || | |||| || ||| ||||| |  ||||||| ||  ||||||||||||| |||||||| ||||||||||||||||||    
T  35121536 aatatatttattcaagaaatggatgttacgtcatcatacaaaaattcaaaacca-taatcatgtatataaacttcaacagtcgcagcggaatataaacta 35121634  T
Q  115 gag 117  Q
    |||    
T  35121635 gag 35121637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 17098514 - 17098654
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaat---------agacatgtatata-aacctcaacagttgca 99  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||||||| |||||||||         |  |||| ||||| || ||||||||| |||    
T  17098514 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaattc-aaaaccaatgattcaaacatgcatgcatatataatctcaacagtcgca 17098612  T
Q  100 gcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||||||| ||||||||| | |||||||||| |||||    
T  17098613 gcggaatataaaccagagtaatccaaatatacatgtcatgaa 17098654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 17936121 - 17936168
Alignment:
Q  73 acatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||||    
T  17936121 acatgtatataaacttcaacagtcgcagcggaatataaaccagagtaa 17936168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 14286932 - 14287033
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| ||||||  | |||||||||||||||  | || |  |||| ||||||| ||||||||| |||||||||||||    
T  14286932 cgaataatacatttattcaagaaatagacgctacgtgatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgcagcggaatata 14287030  T
Q  110 aac 112  Q
    |||    
T  14287031 aac 14287033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 17537306 - 17537205
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||| |||| || |||||||||||||||  | || |  |||| ||||||| ||||||| | |||||||||||||    
T  17537306 cgaataatacatttattcaagaaatagaggttacgtcatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacaatcgcagcggaatata 17537208  T
Q  110 aac 112  Q
    |||    
T  17537207 aac 17537205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 30204368 - 30204429
Alignment:
Q  74 catgtatataaacctcaacagttgcagcggaatataaactagagtaatcaacatatacatgt 135  Q
    |||| |||||||  |||||||| |||||||||||||||| |||||| |||| ||||||||||    
T  30204368 catgcatataaatttcaacagtcgcagcggaatataaaccagagtactcaaaatatacatgt 30204429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 12352028 - 12351981
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatg 134  Q
    |||||||||  ||||||||||||||||||||||||| | |||||||||    
T  12352028 ctcaacagtcacagcggaatataaactagagtaatccaaatatacatg 12351981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 12352114 - 12352060
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| ||||||||||||||||||||| |||||| ||||||||| ||||||    
T  12352114 cgaataatacatttattcaagaaatagaggccacgccatcattcaaaaatcaaaa 12352060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 22148958 - 22148904
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| |||||||||||||||||||| ||||||| ||| ||||||||||||    
T  22148958 cgaataatacatttattcaagaaatagaggttacgccatcatacaaaattcaaaa 22148904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 22148872 - 22148824
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatgt 135  Q
    |||| |||| |||||||||||||||| ||||||||| | ||||||||||    
T  22148872 ctcatcagtcgcagcggaatataaaccagagtaatccaaatatacatgt 22148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 110; Significance: 1e-55; HSPs: 5)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 39109 - 39254
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac-caatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||    
T  39109 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaacaataaacatgtatataaacctcaacagttgcagcgaaatata 39208  T
Q  110 aactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39209 aaccagagtaatcaacatatacatgttatgaagcaataaattacat 39254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 239 - 126
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  239 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 140  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  139 atcagagtgatcaa 126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 8199 - 8086
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  8199 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 8100  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  8099 atcagagtgatcaa 8086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 3153 - 3273
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| |||||| || ||| ||||| |||||  |||   | |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  3153 atttattcaagaaatagatgctacgtcatcatacaaaactcaaactccacatg-catgtatataaatctcaacagtcgcagcggaatataaaccagagta 3251  T
Q  120 atcaacatatacatgttatgaa 141  Q
     || | |||||||||| |||||    
T  3252 ctccaaatatacatgtcatgaa 3273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 11113 - 11233
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| |||||| || ||| ||||| |||||  |||   | |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  11113 atttattcaagaaatagatgctacgtcatcatacaaaactcaaactccacatg-catgtatataaatctcaacagtcgcagcggaatataaaccagagta 11211  T
Q  120 atcaacatatacatgttatgaa 141  Q
     || | |||||||||| |||||    
T  11212 ctccaaatatacatgtcatgaa 11233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 1e-55; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 53910119 - 53909972
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa---tagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||    
T  53910119 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaacaatacacatgtatataaacctcaacagttgcagcggaata 53910020  T
Q  108 taaactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  53910019 taaaccagagtaatcaacatatacatgttatgaatcaataaattacat 53909972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 10641977 - 10642122
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  10641977 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 10642076  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  10642077 accagagtaaattcaa-atatacatgttatgaataaataaattacat 10642122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18245778 - 18245923
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  18245778 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 18245877  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  18245878 accagagtaaattcaa-atatacatgttatgaataaataaattacat 18245923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 9293315 - 9293460
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  9293315 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 9293414  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  9293415 accagagtaaattcaa-atatacatgttatgaataaataaattacat 9293460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 15275061 - 15274916
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  15275061 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcagcagaatataa 15274962  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  15274961 accagagtaaattcaa-atatacatgttatgaataaataaattacat 15274916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 17150646 - 17150501
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  17150646 cgaataatacatttattcaagaaatagaggctacgctacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 17150547  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  17150546 accagagtaaattcaa-atatacatgttatgaataaataaattacat 17150501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 7134900 - 7134755
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  7134900 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcacagcggaatataa 7134801  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||  | |||||||||||||||| |||||||||||||    
T  7134800 accagagtaaattgaaatatacatgttatgaataaataaattacat 7134755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 16520408 - 16520548
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  16520408 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaaggacatgtatataaacctcaacagttgcagcggaatataaaccag 16520507  T
Q  116 agt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| |||| |  |||||||||||||||  ||||||||||||    
T  16520508 agtaaatccaagtatacatgttatgaatcaataaattacat 16520548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 16367002 - 16366866
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  16367002 atttattcaagaaatagaggctacgacacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataaaccagagtaa 16366903  T
Q  121 t--caacatatacatgttatgaagaaataaattacat 155  Q
    |   || |||||||||| |||||  ||||||||||||    
T  16366902 tgaaaatatatacatgtcatgaatcaataaattacat 16366866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 109383 - 109528
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |    
T  109383 cgaataatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaactaataaacatgtatataaacctcaacagttgcagcggaatat-a 109481  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| |||||  ||||||||||||    
T  109482 accagagtaatccaaatatgtacatgtcatgaatcaataaattacat 109528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 8372209 - 8372350
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  8372209 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 8372308  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaatt 151  Q
    || |||||||  |||| |||||||||||||||| | |||||||    
T  8372309 accagagtaaattcaa-atatacatgttatgaatagataaatt 8372350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 26677781 - 26677926
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  26677781 cgaataatacattcattcaagaaatagaggctacgccacattcagaattcaaaaaccaataaacatgtatataaacctcaaaagtcgcagcggaatataa 26677880  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  26677881 accagagtaaattcaa-atatacatgttatgaataaataaattacat 26677926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 5685185 - 5685040
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||  ||||||||    
T  5685185 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattaaaaaaccaataaacatgtatataaacctcaacaatcgcagaagaatataa 5685086  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  5685085 accagagtaaattcaa-atatacatgttatgaataaataaattacat 5685040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 13244239 - 13244385
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  13244239 cgaataatacatttatttaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttacagtggaatataa 13244338  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||| | |||||  ||||||||||||    
T  13244339 accagagtaatccaaatatatacatatcatgaatcaataaattacat 13244385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 54050740 - 54050596
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||||||    
T  54050740 cgaataatacatttattcaagaaatagaggctacgccacattcaaaatttaaaaaccaataaacatgtatat-aacctcaacagtcgcggcggaatataa 54050642  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  54050641 accagagtaaattcaa-atatacatgttatgaataaataaattacat 54050596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 15138795 - 15138654
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15138795 cgaataatacatttattcaagaaatagaggttacgtcatattcaaaattcaaaaaccgatagacatgtatataaacctcaacagttacagcggaatataa 15138696  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  15138695 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 15138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 18166476 - 18166621
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  18166476 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgatagacatatatataaacctcaacagtcgcagcggaatataa 18166575  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||| | |||  | |||||||| |||||||  ||||||||||||    
T  18166576 accagaataaatttaaatatacatattatgaatcaataaattacat 18166621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 14994094 - 14994234
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  14994094 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattc-aaaaccgatagacatgtatacaaacctcaacagttacagcggaatataa 14994192  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||| ||||| |||  ||||||| ||||| ||||||||    
T  14994193 accagagtgatcaaaatatgtacatgtcatgaacaaataaat 14994234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19998113 - 19998262
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacc----aatagacatgtatataaacctcaacagttgcagcggaat 106  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||    |||| ||||||||||||||||||||||| ||||||||||    
T  19998113 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaacccaattaataaacatgtatataaacctcaacagtcgcagcggaat 19998212  T
Q  107 ataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||| |||||||  ||||  ||||||||||||||| |||||||||||||    
T  19998213 ataaaccagagtaaattcaa-ttatacatgttatgaataaataaattacat 19998262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 37474336 - 37474480
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||| || |||||||||||    
T  37474336 cgaataatacatttattcaagaaatagaggctacgccacattcaaaatttaaaaaccaataaacatgtatat-aacatcaacagtcgcggcggaatataa 37474434  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
     | |||||||  |||| |||||||||||||||| |||||||||||||    
T  37474435 tccagagtaaattcaa-atatacatgttatgaataaataaattacat 37474480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 151
Target Start/End: Complemental strand, 53707204 - 53707063
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | || |||||||||||    
T  53707204 cgaataatacatttattcaagaaataaaggctacgctacattcaaaattcaaaaaccaataaacatgtatataaacctcaacaatcgcggcggaatataa 53707105  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaatt 151  Q
    || |||||||  |||| |||||||||||| ||| |||||||||    
T  53707104 accagagtaaattcaa-atatacatgttacgaataaataaatt 53707063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 55379149 - 55379021
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||    
T  55379149 cgaataatacatttattcaagaaatagaggctacgtcacattcaaaattcaaaaatc-ataaacatgtatataaacctcaacagtcgcagcggaatataa 55379051  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||| | |||||||||| |||||    
T  55379050 accagagtaatcca-atatacatgtcatgaa 55379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 12838584 - 12838454
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||||||||||| ||| || ||||||||||||| ||||||||| |||||||||||||    
T  12838584 cgaataatacatttattcaagaaatagaggctacgccatcatccaaaattcaaaa-ccattaaacatgtatataaatctcaacagtcgcagcggaatata 12838486  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| ||||||||||||||| |||||    
T  12838485 aaccagagtactcaacatatacatgtcatgaa 12838454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 41066866 - 41066721
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||||||||    
T  41066866 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccaataaacatgtacataaacctcaacagtcgtagcggaatataa 41066767  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  41066766 accagagtaaattcaa-atatacatgttatgaataaataaattacat 41066721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 8874735 - 8874611
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  8874735 cgaataatacatttattcaagaaatagaggttacgccatcattcaaaattcaaaaacca-taaacatgtatataaacctcaacagtcgcagcggaatata 8874637  T
Q  110 aactagagtaatcaacatatacatgt 135  Q
    ||| ||| ||||| | ||||||||||    
T  8874636 aaccagaataatcgaaatatacatgt 8874611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 54120572 - 54120435
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagac--atgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||||||| |||||| ||||||||||||||    
T  54120572 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatatatatataaacatcaacacttgcagcggaatat 54120473  T
Q  109 aaactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    |         |||||||||||||||||||||||  ||||||||||||    
T  54120472 a---------aatcaacatatacatgttatgaatcaataaattacat 54120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 15211124 - 15211271
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattc--aaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||  |||||| |||| |||||||||||||| |||||||||||||| ||||||    
T  15211124 cgaataatacatttattcatgaaatagaggctacgccacattcaaaattcaaaaaaacaaata-acatgtatataaacatcaacagttgcagcagaatat 15211222  T
Q  109 aaactagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    |||| |||||||||  || |||||||||| |||||  ||||||| ||||    
T  15211223 aaaccagagtaatccaaatatatacatgtcatgaatcaataaatcacat 15211271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 33738087 - 33738197
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||| |  |||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  33738087 cgaataataaatttattcaagaaatagaggctacgccacatccaaaaattcaaaaccaataaacatgtatataaacttcaacagtcgcagcggaatataa 33738186  T
Q  111 actagagtaat 121  Q
    || ||||||||    
T  33738187 accagagtaat 33738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 16330189 - 16330044
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16330189 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16330090  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaattacat 155  Q
    |  ||||| ||| || |||||||||| ||||  |||||||| ||||    
T  16330089 atcagagtgatcaaatatatacatgtcatgagcaaataaatcacat 16330044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 34392988 - 34393118
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  ||||||| || |||||||||||||| |||||||| |||||||||||||    
T  34392988 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatata 34393086  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  34393087 aaccagagtaatccaaatatacatgtcatgaa 34393118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 6403775 - 6403662
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  6403775 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 6403676  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  6403675 atcagagtgatcaa 6403662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 15289293 - 15289193
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||    
T  15289293 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaacgatagacatgtatataaacctcaacagtcacagcggaatataa 15289194  T
Q  111 a 111  Q
    |    
T  15289193 a 15289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16475875 - 16475761
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac-caatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||  |||| || ||||||||||||||||  | ||||||||||||||||||||||||||| |||||||||||||    
T  16475875 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaaacgatagacatgtatataaacctcaacagtcgcagcggaatata 16475776  T
Q  110 aactagagtaatcaa 124  Q
    ||  ||||| |||||    
T  16475775 aatcagagtgatcaa 16475761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 15296460 - 15296360
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  || |||||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||    
T  15296460 cgaataatacatttattcaagaaatagagattacctcatattcaaaattcaaaaaacgatagacatgtatataaacctcaacagtcacagcggaatataa 15296361  T
Q  111 a 111  Q
    |    
T  15296360 a 15296360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 135
Target Start/End: Complemental strand, 20814267 - 20814153
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||||| |||  || ||| |||||||||||| |||||| |||||||||||||| |||||||| |||||||||||||||| ||||||    
T  20814267 atttattcaagaaatagaggatacatcatcatgcaaaattcaaaa-ccaataaacatgtatataaacttcaacagtcgcagcggaatataaaccagagta 20814169  T
Q  120 atcaacatatacatgt 135  Q
     || | ||||||||||    
T  20814168 ttccaaatatacatgt 20814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 22356998 - 22356895
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||||||||| |||| |  |||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||| |||  ||||| |    
T  22356998 atttattcaagaaatagaggttacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttttagcggaatacaaatcagagtga 22356899  T
Q  121 tcaa 124  Q
    ||||    
T  22356898 tcaa 22356895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 23272436 - 23272306
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccac-attcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||||||  || ||||| |  ||||||  || |||||||||||||| |||||||| |||||||||||||    
T  23272436 cgaataatacatttattcaagaaatagaggctacgccattatacaaaaattcaaaacct-taaacatgtatataaacttcaacagtcgcagcggaatata 23272338  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  23272337 aaccagagtaatccaaatatacatgtcatgaa 23272306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 26337378 - 26337491
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  26337378 cgaataatacatttattcaagaaatagagattacgtcttattcaaatttcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 26337477  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  26337478 atcagagtgatcaa 26337491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 16395994 - 16395865
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||  |||||||||||| |  ||| |||||||||||||| |||||||| |||||||||||||    
T  16395994 cgaataatacatttattcaagaaatagaggctacgtcatcacacaaaattcaaaacc--ataaacatgtatataaacttcaacagtcgcagcggaatata 16395897  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||  | | |||||||||| |||||    
T  16395896 aaccagagtacaccaaatatacatgtcatgaa 16395865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 30457498 - 30457615
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatc 122  Q
    |||||||||||||||||||||| |  ||| ||||| |  ||||||| || |||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  30457498 ttattcaagaaatagaggctacacatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagttgcagcagaatataaaccagagtaatc 30457596  T
Q  123 aacatatacatgttatgaa 141  Q
     | | |||||||| |||||    
T  30457597 taaagatacatgtcatgaa 30457615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 10486568 - 10486680
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||| | ||||||||||| ||| ||||||||||| |||||||||||||    
T  10486568 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaacga-tagacatgtatgtaaccctcaacagttacagcggaatataa 10486666  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  10486667 atcagagtgatcaa 10486680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 13752545 - 13752415
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaa-ttcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||| |||||||  ||| | |||||||||||||| ||||||||  |||||||||||    
T  13752545 cgaataatacatttattcaagaaatagaggctacgtcatcatacaaaaattcaaaa--caaaaaacatgtatataaacttcaacagtcacagcggaatat 13752448  T
Q  109 aaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||  ||||| |||| |||||||||| |||||    
T  13752447 aaacctgagtactcaaaatatacatgtcatgaa 13752415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 47355124 - 47355264
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||| ||||||||||| |||||||||| ||| ||| |||| ||| ||||||||||||||    
T  47355124 cgaataatacatttattcaagaaatagagattacgtcttattcaatattcaaaaaccgatagacatgtttatgaacttcaatagtcgcagcggaatataa 47355223  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  47355224 atcagagtgatcaaatatatacatgtcatgagcaaataaat 47355264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 13050429 - 13050287
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |   ||||||||||||||||  |||||||||||| ||||||||||||||| || ||||||| ||    
T  13050429 cgaataatacatttattcaagaaatagagattacgtctttttcaaaattcaaaaactgatagacatgtatgtaaacctcaacagttacatcggaatacaa 13050330  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaatta 152  Q
    |  ||||| ||| || |||||||||  ||||  ||||||||||    
T  13050329 atcagagtgatcaaatatatacatgccatgagcaaataaatta 13050287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 14949911 - 14950007
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaa-ccaatagacatgtatataaacctcaacagttgcagcggaat 106  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| || |||||||||||||| ||| |||||||| ||||||||||    
T  14949911 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaaccgatagacatgtatatgaacttcaacagtcgcagcggaat 14950007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 45461285 - 45461155
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||| ||| || ||| ||||| |  ||||||| || |||||||||||||| |||| ||| ||||||||||| |    
T  45461285 cgaataatacatttattcaagaaatagaggccacgtcatcatacaaaaattcaaaacca-taaacatgtatataaacttcaaaagtcgcagcggaataaa 45461187  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||  |||||| |||| |||||||||| |||||    
T  45461186 aatcagagtactcaaaatatacatgtcatgaa 45461155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 28266237 - 28266153
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagt 95  Q
    |||| |||| |||||||||||||||| |||||||  ||||||||||| |  |||||||||  |||||||||||||| ||||||||    
T  28266237 cgaataatacatttattcaagaaataaaggctacatcacattcaaaaattcaaaaccaatgaacatgtatataaacttcaacagt 28266153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 21961826 - 21961719
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaa-ttcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| ||||||||||||||||||||||||  || ||| ||||| ||||||| |  ||  |||||||||||||| |||||||||||||| ||||||    
T  21961826 cgaataatacatttattcaagaaatagaggctacatcatcatacaaaaattcaaaatc--atgcacatgtatataaacttcaacagttgcagcagaatat 21961729  T
Q  109 aaactagagt 118  Q
    |||| |||||    
T  21961728 aaaccagagt 21961719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 12901944 - 12901890
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||| |||||    
T  12901944 ctcaacagtcgcagcggaatataaaccagagtaatccaaatatacatgtcatgaa 12901890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 44344689 - 44344738
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  44344689 aatacatttattcaagaaatagaggttacgccatcattcaaaattcaaaa 44344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 18496718 - 18496631
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcg 102  Q
    |||| |||||||||||||||||| |||||| || ||| ||||| |  |||||||| | ||||| ||||||||||||||| | ||||||    
T  18496718 aatacatttattcaagaaatagatgctacgtcatcatacaaaaattcaaaaccaacatacatgcatataaacctcaacattcgcagcg 18496631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 7848283 - 7848390
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| || ||||||||||||||| | |||| || ||| | || ||| |||| ||||| ||||||||| |||| |||||||| ||||||||| |||    
T  7848283 cgaataatacatctattcaagaaatagaagttacgtcatcataccaatttccaaaaacaataaacatgtata-aaacttcaacagtcgcagcggaagata 7848381  T
Q  110 aactagagt 118  Q
    ||| |||||    
T  7848382 aaccagagt 7848390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19620 - 19764
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19620 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 19719  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || | |||||||||||||||||||  |||||  ||||||||||||    
T  19720 acaaaagtaatcaacatatacatgccatgaatcaataaattacat 19764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 105; Significance: 1e-52; HSPs: 4)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 501 - 357
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  501 cgaataatacatttattcaagaaatagaggctacgccacatttaaaattcaaaaaccaataaacatgtatataaacctcaatagttgcagtggaatataa 402  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||||||| |||||||||||||  ||||||||||||    
T  401 accagagtaatcaacatgtacatgttatgaatcaataaattacat 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 6965 - 6821
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  6965 cgaataatacatttattcaagaaatagaggctacgccacatttaaaattcaaaaaccaataaacatgtatataaacctcaatagttgcagtggaatataa 6866  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||||||| |||||||||||||  ||||||||||||    
T  6865 accagagtaatcaacatgtacatgttatgaatcaataaattacat 6821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 3915 - 4040
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||| |||||| || |||||||||||||||  | || |  |||| ||||||| ||||||||| | |||||||||||||| |    
T  3915 aatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgtagcggaatataaacca 4013  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    ||||| || | |||||||||| |||||    
T  4014 gagtactccaaatatacatgtcatgaa 4040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 10381 - 10506
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||| |||||| || |||||||||||||||  | || |  |||| ||||||| ||||||||| | |||||||||||||| |    
T  10381 aatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgtagcggaatataaacca 10479  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    ||||| || | |||||||||| |||||    
T  10480 gagtactccaaatatacatgtcatgaa 10506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 27539 - 27663
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27539 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcgaaatataa 27638  T
Q  111 actagagtaatcaacatatacatgt 135  Q
    || ||||||||||||||||||||||    
T  27639 accagagtaatcaacatatacatgt 27663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 2024297 - 2024441
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||    
T  2024297 cgaataatacatttattcaagaaaaagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaatataa 2024396  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||||||||||||||| |||||  ||||||||||||    
T  2024397 accagagtaatcaacatatacatgtcatgaatcaataaattacat 2024441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 32496813 - 32496669
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| | ||||||||||    
T  32496813 cgaataatacatttattcaagaaatagaggctacgccatattcaaaattcaaaaatcaataaacatgtatataaacctcaacagttgaatcggaatataa 32496714  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || | ||||||||||||||||||||||||||| ||||||||||||    
T  32496713 accatagtaatcaacatatacatgttatgaagtaataaattacat 32496669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 13039498 - 13039352
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13039498 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 13039399  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    ||||| ||||||  || |||||||||| |||||  ||||||||||||    
T  13039398 actagggtaatccaaatatatacatgtcatgaatcaataaattacat 13039352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 7290510 - 7290653
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  7290510 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 7290609  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||| | ||||||| ||||||||  ||||||||||||    
T  7290610 accagagtaatccaaatatacacgttatgaa-taataaattacat 7290653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 368744 - 368889
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  368744 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 368843  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||  |||| |||||||||||| ||| |||||||||||||    
T  368844 actagagtaaattcaa-atatacatgttaagaataaataaattacat 368889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 11583206 - 11583060
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11583206 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 11583107  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||| | |||||  ||||||||||||    
T  11583106 accagagtaatccaaatatatacatatcatgaatcaataaattacat 11583060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 15953450 - 15953305
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  15953450 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 15953351  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  15953350 accagagtaaattcaa-atatacatgttatgaataaataaattacat 15953305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 15858598 - 15858738
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||    
T  15858598 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagaggaatataaaccag 15858697  T
Q  116 agtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||  |||| |||||||||||||||| |||||||||||||    
T  15858698 agtaaattcaa-atatacatgttatgaataaataaattacat 15858738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 2193196 - 2193051
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2193196 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 2193097  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  2193096 accagagtaaatccaagtatacatgttatgaatcaataaattacat 2193051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 122405 - 122551
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  122405 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaataacatgtatataaacctcaacagttgcagcggaatataa 122504  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||| ||||    
T  122505 accagagtaatccaaatatatacatgtcatgaatcaataaatcacat 122551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 6321141 - 6320996
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||    
T  6321141 cgaataatacatttattcaagaaatagaggctacacaacattcaaaattcaaaaaccaataaacatgtatataaacatcaacagtcgcagcggaatataa 6321042  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  6321041 acaagagtaaattcaa-atatacatgttatgaataaataaattacat 6320996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 1938989 - 1938881
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1938989 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaatagttgcagcagaatataa 1938890  T
Q  111 actagagta 119  Q
    || ||||||    
T  1938889 accagagta 1938881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 3054602 - 3054748
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||    
T  3054602 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgccatgaaatataa 3054701  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| ||||| |||||||||||||    
T  3054702 accagagtaatccaaatatgtacatgtcatgaataaataaattacat 3054748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 7286912 - 7286801
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7286912 cgaataatacatttattcaagaaatagaggttgcgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 7286813  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  7286812 accagagtaatc 7286801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 113543 - 113415
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaa---ccaatagacatgtatataaacctcaacagttgcagcggaatataaac 112  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||   |||||| | ||||||||||||||||||||||||| | ||||||||||    
T  113543 aatacatttattcaagaaatagaggctaccccacattcaaaattcaaaaaaaaccaataaatatgtatataaacctcaacagttgcatcagaatataaac 113444  T
Q  113 tagagtaatcaacatatacatgttatgaa 141  Q
     ||||||||||||||||||||||||||||    
T  113443 cagagtaatcaacatatacatgttatgaa 113415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 36050856 - 36050997
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||    
T  36050856 aatacatttatttaagatatagaggctacgccacattcaaaatttaaaaaccaataaacatgtatataaacctcaacagttgcagcgaaatataaaccag 36050955  T
Q  116 agtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    ||||||||| |||  ||||||| |||||  ||||||||||||    
T  36050956 agtaatcaaaatatgtacatgtcatgaatcaataaattacat 36050997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 2435483 - 2435596
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  2435483 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgatagacatttatataaacctcaacagttgcagcggaatataa 2435582  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  2435583 atcagagtgatcaa 2435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 12546189 - 12546068
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| |||| ||| | |||||||||||||| ||||||    
T  12546189 atttattcaagaaatagaggctacgccatcatccaaaattcaaaaaccaataaacatgtatataaacttcaatagtcgtagcggaatataaaccagagta 12546090  T
Q  120 atcaacatatacatgttatgaa 141  Q
     |||||||||||||||||||||    
T  12546089 ctcaacatatacatgttatgaa 12546068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 7287580 - 7287469
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7287580 cgaataatacatttaatcaagaaatagaggttgcgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 7287481  T
Q  111 actagagtaatc 122  Q
    || ||| |||||    
T  7287480 accagaataatc 7287469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 3893001 - 3893126
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||| |    
T  3893001 aatacatttattcaagaaatagaggctacgccatcatccaaaattcaaaa-ccaataaacatgtatataaatctcaacagtcgcagcggaatataaacca 3893099  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    |||||||| | |||||||||| |||||    
T  3893100 gagtaatccaaatatacatgtcatgaa 3893126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 26072525 - 26072394
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||||| |||||| | |||||||||||||    
T  26072525 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaaccaataaacatgtatataaacttcaacaatcgcagcggaatata 26072426  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| ||||||||||||||| |||||    
T  26072425 aaccagagtactcaacatatacatgtcatgaa 26072394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 26096312 - 26096181
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||| |  |||||||||| |||||||||||||| |||||| | |||||||||||||    
T  26096312 cgaataatacatttattcaagaaatagaggctacgccatcatacaaaaattcaaaaccaataaacatgtatataaacttcaacaatcgcagcggaatata 26096213  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| ||||||||||||||| |||||    
T  26096212 aaccagagtactcaacatatacatgtcatgaa 26096181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 12752782 - 12752912
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || ||| |||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||    
T  12752782 cgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattccaaaacca-taaacatgtatataaacttcaacagttgcagcggaatata 12752880  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| |||||||||| |||||    
T  12752881 aaccagagtactcaaaatatacatgtcatgaa 12752912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 48624619 - 48624502
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||| || |||||||||||||    
T  48624619 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattc-aaaacggatagacatgtatataaacctcaacatttacagcggaatataa 48624521  T
Q  111 actagagtaatcaacatat 129  Q
    |  ||||| ||||| ||||    
T  48624520 atcagagtgatcaaaatat 48624502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 12113644 - 12113757
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  12113644 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccaatagacatgtatataaacctcaacagtcacaacggaatataa 12113743  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  12113744 atcagagtgatcaa 12113757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 18982250 - 18982150
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  18982250 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacttcaacagtcgcagcggaatataa 18982151  T
Q  111 a 111  Q
    |    
T  18982150 a 18982150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 15824761 - 15824631
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||| |||| || ||   ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||    
T  15824761 cgaataatacatttattcaagaaatagaggttacgtcatcaacaaaaattcaaaa-ccaataaacatgtatataaatctcaacagtcgcagcggaatata 15824663  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | ||||||||||||||||    
T  15824662 aaccagagtaatccaaatatacatgttatgaa 15824631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 26011456 - 26011334
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  26011456 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 26011357  T
Q  111 actagagtaatcaacatatacatg 134  Q
    |  ||||| ||||| |||||||||    
T  26011356 atcagagtgatcaa-atatacatg 26011334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 7820821 - 7820934
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  7820821 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 7820920  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  7820921 atcagagtgatcaa 7820934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 7828132 - 7828245
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  7828132 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 7828231  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  7828232 atcagagtgatcaa 7828245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 11514020 - 11514133
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  11514020 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 11514119  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  11514120 atcagagtgatcaa 11514133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 13913381 - 13913268
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  13913381 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 13913282  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  13913281 atcagagtgatcaa 13913268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 15443825 - 15443712
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  15443825 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 15443726  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  15443725 atcagagtgatcaa 15443712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 16416113 - 16416226
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16416113 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16416212  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16416213 atcagagtgatcaa 16416226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 27103812 - 27103699
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  27103812 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 27103713  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  27103712 atcagagtgatcaa 27103699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 27111160 - 27111047
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  27111160 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 27111061  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  27111060 atcagagtgatcaa 27111047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 27174513 - 27174626
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  27174513 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 27174612  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  27174613 atcagagtgatcaa 27174626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 42060558 - 42060445
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  42060558 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 42060459  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  42060458 atcagagtgatcaa 42060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 13875343 - 13875212
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    ||||| |||| ||||||||||||||||||| |||||||| ||| ||||| |  ||||||| || |||||||||||||| |||||||| ||||||||||||    
T  13875343 tcgaataatacatttattcaagaaatagagactacgccatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatat 13875245  T
Q  109 aaactagagtaatcaacatatacatgttatgaa 141  Q
    |||| ||||||||| | |||||||||| |||||    
T  13875244 aaaccagagtaatccaaatatacatgtcatgaa 13875212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 30264390 - 30264250
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||    
T  30264390 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaaccgttacagcggaatataa 30264291  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  30264290 atcagagtgatcaaatatatacatgtcatgagcaaataaat 30264250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 15519128 - 15519026
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca--aaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| || ||||||||||||||||| ||||||||||||||||||||  |||| | |||||||||||||||||||||||||||| ||| |||||||    
T  15519128 cgaataatacatctattcaagaaatagaggttacgccacattcaaaattcaaaaaaaacgatagacatgtatataaacctcaacagttacagtggaatat 15519029  T
Q  109 aaa 111  Q
    |||    
T  15519028 aaa 15519026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 44863089 - 44863210
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||||||||||||| ||  ||||| |  |||||||||| |||||||||||||| |||| ||| |||||||||||||||| ||| ||    
T  44863089 atttattcaagaaatagaggctacgccatcaaacaaaaattcaaaaccaataaacatgtatataaacttcaatagtcgcagcggaatataaaccagaata 44863188  T
Q  120 atcaacatatacatgttatgaa 141  Q
    ||| | |||||||||| |||||    
T  44863189 atccaaatatacatgtcatgaa 44863210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 16481204 - 16481128
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacc 87  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  16481204 cgaataatacatttattcaagaaatagaggctacgctacattcaatattcaaaaaccaataaacatgtatataaacc 16481128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 13174122 - 13174208
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagaca--tgtatataaacctcaacagt 95  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |  ||||||||||||||||||||    
T  13174122 cgaataatacatttattcaagaaatagaggctacgccacattcaaaatccaaaaaccaataaatatgtgtatataaacctcaacagt 13174208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 25294544 - 25294421
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||||||||||| || ||| || ||||| ||||||||||||||    
T  25294544 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtacatgaacttcgacagtcgcagcggaatataa 25294445  T
Q  111 actagagtaatcaacatatacatg 134  Q
    |  ||||| ||||| |||||||||    
T  25294444 atcagagtgatcaatatatacatg 25294421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 37939185 - 37939298
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||| ||    
T  37939185 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacaacggaatacaa 37939284  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  37939285 atcagagtgatcaa 37939298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 38785913 - 38785820
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcgga 104  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  38785913 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcgga 38785820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 48759349 - 48759241
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||| |||  ||    
T  48759349 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaataccgatagacatgtatgtaaacctcaacagttacagcggaatacaaatcag 48759250  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  48759249 agtgatcaa 48759241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 10987506 - 10987620
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac-caatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||  | |||||||||||| ||||||||||||||| ||||||||||||    
T  10987506 cgaataatagatttattcaagaaatagagattacgtcttattcaaaattcaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaatata 10987605  T
Q  110 aactagagtaatcaa 124  Q
    ||  ||||| |||||    
T  10987606 aatcagagtgatcaa 10987620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 45455971 - 45455840
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||| ||||||||||||||||| || ||| ||||| | |||||   ||| |||||||||||||| |||||||| |||||||||||||    
T  45455971 cgaataatacatttatttaagaaatagaggctacgtcatcatacaaaaattaaaaaatcataaacatgtatataaacttcaacagtcgcagcggaatata 45455872  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| ||| | |||| |||||    
T  45455871 aaccagagtactcaaaatacatatgtcatgaa 45455840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 13250460 - 13250375
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagtt 96  Q
    |||| |||| |||||||||||||||||||  || | |  |||||||||||||||||| |||||||||||| |||||||||||||||    
T  13250460 cgaataatacatttattcaagaaatagagattatgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagtt 13250375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 19666310 - 19666363
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaa 64  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19666310 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa 19666363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 10261881 - 10261996
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattc--aaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| | ||||||||||||  ||||| | |||||||||||| ||||||||||||||| || |||||||     
T  10261881 cgaataatacatttattcaagaaatagagattacgtctcattcaaaattcaaaaaaaacgatagacatgtatgtaaacctcaacagttacaacggaatac 10261980  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  10261981 aaatcagagtgatcaa 10261996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 11284947 - 11285077
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || |||||||||||||||  | || |  |||| ||||||| |||||||||  ||||||||||||    
T  11284947 cgaataatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcacagcggaatata 11285045  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| || | |||||||||| |||||    
T  11285046 aaccagagtactccaaatatacatgtcatgaa 11285077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 18306227 - 18306097
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | |||| || |||||||||||||||  | |  || |||| ||||||| ||||| ||| |||||||||||||    
T  18306227 cgaataatacatttattcaagaaatagatgttacgtcatcattcaaaattcaaactcaacaag-catgcatataaatctcaatagtcgcagcggaatata 18306129  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| |||||||||| |||||    
T  18306128 aaccagagtactcaaaatatacatgtcatgaa 18306097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 13756470 - 13756568
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacca--atagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||| |||||  |  |||||||||||| ||||||||||||||| ||||||||||    
T  13756470 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattaaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaata 13756568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 13845281 - 13845151
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||  ||||| || |||||||||||||||  | || | ||||| ||||||| ||||||||| ||||||||||||     
T  13845281 cgaataatacatttattcaagaaatagattctacgtcatcattcaaaattcaaattc-aacatacatgcatataaatctcaacagtcgcagcggaatatg 13845183  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| | |||| | || |||||||||| |||||    
T  13845182 aaccaaagtacttaaaatatacatgtcatgaa 13845151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 16209646 - 16209705
Alignment:
Q  63 aaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatc 122  Q
    ||||||||| ||||||||||||||||| ||| || ||||||||||||||| |||||||||    
T  16209646 aaaccaataaacatgtatataaacctcgacaattacagcggaatataaaccagagtaatc 16209705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 141467 - 141521
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  141467 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaa 141521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 12250329 - 12250204
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||| ||||||  | | ||||||||||||||  ||| |  |||| ||||||| ||||||||| ||||||| |||||||| |    
T  12250329 aatacatttattcaagaaatagatgctacgttatctttcaaaattcaaaactcaacatccatgcatataaatctcaacagtcgcagcgg-atataaacca 12250231  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    ||||| || | |||||||||| |||||    
T  12250230 gagtactccaaatatacatgtcatgaa 12250204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 104; Significance: 5e-52; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 86546 - 86401
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  86546 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 86447  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  86446 accagagtaaattcaa-atatacatgttatgaataaataaattacat 86401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 11527 - 11414
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || | || |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  11527 cgaataatacatttattcaagaaatagagattaagtcatattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 11428  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  11427 atcagagtgatcaa 11414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 156722 - 156628
Alignment:
Q  62 aaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||||||| |||||||  |||| ||||||||||||||||  ||||||||||||    
T  156722 aaaaccgataaacatgtatataaacctcaacagtcgcagcggaatataaaccagagtaaattcaa-atatacatgttatgaatcaataaattacat 156628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 91872 - 91990
Alignment:
Q  23 ttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaat 121  Q
    |||||||||||||||| |||||| || |||||||||||||||| | || |  |||| |||||| |||||||||| ||||||||||| |||  |||||| |    
T  91872 ttattcaagaaatagatgctacgtcatcattcaaaattcaaaatc-aacatgcatgcatataatcctcaacagtcgcagcggaataaaaaacagagtact 91970  T
Q  122 caacatatacatgttatgaa 141  Q
    | | |||||||||| |||||    
T  91971 ccaaatatacatgtcatgaa 91990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 1222225 - 1222080
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  1222225 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 1222126  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  1222125 accagagtaaattcaa-atatacatgttatgaataaataaattacat 1222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 9733178 - 9733033
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9733178 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 9733079  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||  |||| |||||||||||| ||| |||||||||||||    
T  9733078 actagagtaaattcaa-atatacatgttaagaataaataaattacat 9733033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 10780703 - 10780558
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  10780703 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 10780604  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  10780603 accagagtaaattcaa-atatacatgttatgaataaataaattacat 10780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 29193257 - 29193112
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  29193257 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 29193158  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||| ||| |||||||||||||    
T  29193157 accagagtaaattcaa-atatacatgttaagaataaataaattacat 29193112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 35793745 - 35793600
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  35793745 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 35793646  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  35793645 accagagtaaatccaagtatacatgttatgaatcaataaattacat 35793600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 23512638 - 23512782
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||| ||    
T  23512638 cgaataatacatttattcaagaaatagaggctatgccacattcaaaattcaaaaaccaataaacatgtatataaacttcaacagtcgcagcagaatacaa 23512737  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||| || ||||||||||||||||||||| |||||||||||||    
T  23512738 accagattactcaacatatacatgttatgaataaataaattacat 23512782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 25212380 - 25212250
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  25212380 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcagaatataa 25212281  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||| | |||||||||| |||||    
T  25212280 accagagtaatccaaatatacatgtcatgaa 25212250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 25276532 - 25276402
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||    
T  25276532 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcagaatataa 25276433  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||| | |||||||||| |||||    
T  25276432 accagagtaatccaaatatacatgtcatgaa 25276402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 111554 - 111409
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  111554 cgaataatacatttattcaagaaatagaggctacgtcacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 111455  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  111454 accagagtaaatccaagtatacatgttatgaatcaataaattacat 111409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 11579529 - 11579674
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  11579529 cgaataatacatttattcaagaaatagaggctatgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 11579628  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  ||||||||||||||| |||||||| ||||    
T  11579629 accagagtaaatccaagtatacatgttatgaataaataaatcacat 11579674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 9908 - 10053
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||    
T  9908 cgaataatacatttattcaagaaatagaggctactccacattcaaaattcaaaattcaataaacatgtatataaacctcaacagtcgcagcggaatataa 10007  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  10008 accagagtaaattcaa-atatacatgttatgaataaataaattacat 10053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 25945125 - 25944991
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatc 122  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||     
T  25945125 ttatttaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataaaccagagtaatt 25945026  T
Q  123 aacata--tacatgttatgaagaaataaattacat 155  Q
    || |||  ||||||| |||||  ||||||||||||    
T  25945025 aaaatatgtacatgtcatgaatcaataaattacat 25944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 28257392 - 28257522
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  28257392 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacaatcgcagcggaatataa 28257491  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||| | |||||||||| |||||    
T  28257492 accagagtaatccaaatatacatgtcatgaa 28257522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 11340199 - 11340344
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||    
T  11340199 cgaataatacatttatttaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaatagtcgcagcggaatataa 11340298  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  11340299 accagagtaaatccaagtatacatgttatgaatcaataaattacat 11340344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 18780635 - 18780490
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| | ||||||||||||    
T  18780635 cgaataatacatttattcaagaaatagaggctactccacattcaaaattcaaaaaccaataaacatgtatataaacttcaacagtcgtagcggaatataa 18780536  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  18780535 accagagtaaatccaagtatacatgttatgaatcaataaattacat 18780490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 17474287 - 17474143
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||| |||||  ||| ||||||||||||||||||||||| ||||| ||||||||    
T  17474287 cgaataatacatttattcaagaaatagagtctacgccacattcaaaattc-aaaacggataaacatgtatataaacctcaacagtcgcagcagaatataa 17474189  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||  |||| |||||||||||||||| |||||||||||||    
T  17474188 actagagtaaattcaa-atatacatgttatgaataaataaattacat 17474143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19497541 - 19497686
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||| || |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  19497541 cgaataatacatttattcaagaaatagaggttacgtcatattcaaaattcaaaaaccaataaacatgtgtataaacctcaacagtcgcagcggaatataa 19497640  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||| |||||||||||| |||||||||||||    
T  19497641 accagagtaaattcaa-atacacatgttatgaataaataaattacat 19497686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 24470181 - 24470276
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaa 111  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  24470181 aatacatttattcaagaaatagaggctacgccacatgcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcagaatataaa 24470276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 21392044 - 21392169
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||| ||||||||||| |  |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||    
T  21392044 aatacatttattcaagaaatagaggctacgtcacattcaaaaattcaaaaccaataaacatgtatataaacttcaacagttgcagcggaatataaaccag 21392143  T
Q  116 agtaatcaacatatacatgttatgaa 141  Q
    ||||||| | ||||| |||| |||||    
T  21392144 agtaatccaaatatatatgtcatgaa 21392169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 22885619 - 22885485
Alignment:
Q  22 tttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa- 120  Q
    ||||||||||||||||||  |||| || |||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||| |||||||     
T  22885619 tttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtacataaacctcaacagtcgcagtggaatataaaccagagtaaa 22885520  T
Q  121 -tcaacatatacatgttatgaagaaataaattacat 155  Q
     |||| |||||||||||||||| |||||||||||||    
T  22885519 ttcaa-atatacatgttatgaataaataaattacat 22885485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 1171578 - 1171474
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca---aaaaccaatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||| |||||||||||    
T  1171578 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcataaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaata 1171479  T
Q  108 taaac 112  Q
    |||||    
T  1171478 taaac 1171474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 23509880 - 23509981
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| | |||||    
T  23509880 atttattcaagaaatataggctacgccacattcagaattcaaaaaccgataaacatgtatataaacctcaatagttgcagcggaatataaaccaaagtaa 23509979  T
Q  121 tc 122  Q
    ||    
T  23509980 tc 23509981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 23442376 - 23442259
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  23442376 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattc-aaaacagatagacatgtatataaacctcaacagttacagcggaatataa 23442278  T
Q  111 actagagtaatcaacatat 129  Q
    |  ||||| ||||| ||||    
T  23442277 atcagagtgatcaaaatat 23442259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 4863163 - 4863293
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||| ||||||||||| || |||||||||||||| |||||||| |||||||||||||    
T  4863163 cgaataatacatttattcaagaaatagaggctacgccatcatccaaagttcaaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatata 4863261  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||| ||| | |||||||||| |||||    
T  4863262 aaccagagtgatccaaatatacatgtcatgaa 4863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 27186539 - 27186393
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||| ||||| ||||  |||||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||    
T  27186539 cgaataatacatttatttaagaaatagtggctatgccatgttcaaaattcaaaaactaataaacatgtatataaacttcaacagttgtagcggaatataa 27186440  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || | |||||||  || |||||||||| |||||  ||||||||||||    
T  27186439 accaaagtaatccaaatatatacatgtcatgaatcaataaattacat 27186393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 7423501 - 7423614
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  7423501 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacttcaacagtcgcagcggaatataa 7423600  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  7423601 atcagagtgatcaa 7423614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 25424278 - 25424391
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  25424278 cgaataatacatttattcaagaaatagaggttacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 25424377  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  25424378 atcagagtgatcaa 25424391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 20594353 - 20594493
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| || |||||||||||| |||||||||||||    
T  20594353 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtagacctcaacagttacagcggaatataa 20594452  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    | |||||| ||| || |||||||||  ||||| ||||||||    
T  20594453 attagagtgatcaaatatatacatgccatgaacaaataaat 20594493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 20710385 - 20710515
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || |||  |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||     
T  20710385 cgaataatacatttattcaagaaatagaagctacgtcatcatctaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcagaatat- 20710483  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  20710484 aaccagagtaatccaaatatacatgtcatgaa 20710515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 21647090 - 21647200
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| ||||||| ||||||||||||||| |||||||||| | ||||||||||||| |||||||||  |||||||||||    
T  21647090 cgaataatacatttattcaagaaataaaggctacaccacattcaaaattc-aaaaccaataaatatgtatataaaccacaacagttgttgcggaatataa 21647188  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  21647189 accagagtaatc 21647200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21922459 - 21922346
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  21922459 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 21922360  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21922359 atcagagtgatcaa 21922346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21934541 - 21934428
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  21934541 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 21934442  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21934441 atcagagtgatcaa 21934428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21940711 - 21940598
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  21940711 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 21940612  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21940611 atcagagtgatcaa 21940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 37011545 - 37011432
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  37011545 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 37011446  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  37011445 atcagagtgatcaa 37011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 37050880 - 37050993
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  37050880 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 37050979  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  37050980 atcagagtgatcaa 37050993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 43446308 - 43446194
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaatt-caaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  43446308 cgaataatacatttattcaagaaatagagattacgtcttattcaaaatttcaaaaaccgatagacatgtatataaacctcaacagtcgcagcggaatata 43446209  T
Q  110 aactagagtaatcaa 124  Q
    ||  ||||| |||||    
T  43446208 aatcagagtgatcaa 43446194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 4202350 - 4202237
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||    
T  4202350 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagtcgcatcggaatataa 4202251  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  4202250 atcagagtgatcaa 4202237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 21075869 - 21075756
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||||| ||| |||||||| ||||||||||||||    
T  21075869 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatatgaacttcaacagtcgcagcggaatataa 21075770  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  21075769 atcagagtgatcaa 21075756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 23986742 - 23986622
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    ||||||||||||||||||||||| | || ||| ||||| |  ||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  23986742 atttattcaagaaatagaggctatgtcatcatacaaaagttcaaaacca-taaacatgtatataaacctcaacagtcgcagcgaaatataaactagagta 23986644  T
Q  120 atcaacatatacatgttatgaa 141  Q
    ||| | |||||||||| |||||    
T  23986643 atccaaatatacatgtcatgaa 23986622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 25902707 - 25902594
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||    
T  25902707 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcgacagttacagcggaatataa 25902608  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  25902607 atcagagtgatcaa 25902594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 35580151 - 35580264
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||||    
T  35580151 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaatagttacagcggaatataa 35580250  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  35580251 atcagagtgatcaa 35580264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 16534006 - 16534145
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  | |||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16534006 cgaataatacatttattcaagaaatagagattacgtctta-tcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16534104  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  16534105 atcagagtgatcaaatatatacatgtcatgagcaaataaat 16534145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 21235797 - 21235704
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcgga 104  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  21235797 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcgga 21235704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 22369060 - 22368947
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||| |||||||||| | |||||||||||| ||||||||||| || ||||||||||||||    
T  22369060 cgaataatacatttattcaagaaatagagattacgtcttattcataattcaaaaaacgatagacatgtatgtaaacctcaacggtcgcagcggaatataa 22368961  T
Q  111 actagagtaatcaa 124  Q
    |  |||||||||||    
T  22368960 atcagagtaatcaa 22368947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23326849 - 23326962
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| |||||||||||||| |||||||||||| || |||||||||| ||    
T  23326849 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacaatagacatgtatgtaaacctcaacaattacagcggaatacaa 23326948  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  23326949 atcagagtgatcaa 23326962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 11213975 - 11213877
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattc-aaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||| ||| ||  |||||||| ||||||||||||||    
T  11213975 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaattcaaaaccgaata-acatgcata-aattctcaacagatgcagcggaatata 11213878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 11339199 - 11339069
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||||||||||| |||||||||||| |||| || |||| ||||||||||  | || |  |||| ||||||| ||||||||| | |||||||||||    
T  11339199 cgaataatatatttatttaagaaatagaggttacgtcatcatttaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgtagcggaatata 11339101  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| || | |||||||||| |||||    
T  11339100 aaccagagtactccaaatatacatgtcatgaa 11339069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 24594396 - 24594511
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa--tagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| ||||||||||||||||||   |||| |  ||||||||||||||||  |   ||||||||||| ||||||||||||||| ||||||||||     
T  24594396 cgaataatacatttattcaagaaatagaaattacgtcttattcaaaattcaaaaagaacggtagacatgtatgtaaacctcaacagttacagcggaatac 24594495  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  24594496 aaatcagagtgatcaa 24594511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 134
Target Start/End: Original strand, 19403442 - 19403555
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| | |||  || |||||||||||||||  | || |  |||| ||||||| ||||||||| |||||||||||||||| ||||||    
T  19403442 atttattcaagaaatagatgttacttcatcattcaaaattcaaactc-aacatgcatgcatataaatctcaacagtcgcagcggaatataaaccagagta 19403540  T
Q  120 atcaacatatacatg 134  Q
     || | |||||||||    
T  19403541 ctccaaatatacatg 19403555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 24185522 - 24185421
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||||||||||||||||||| || | |||| || ||| ||||| |  ||||||| ||  ||||||||||||| |||||||| |||||||||||||||| |    
T  24185522 aatatatttattcaagaaatggatgttacgtcatcatacaaaaattcaaaacca-taaccatgtatataaacttcaacagtcgcagcggaatataaacca 24185424  T
Q  115 gag 117  Q
    |||    
T  24185423 gag 24185421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 27007891 - 27007992
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaa--ccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||| ||  |||| |  ||||||||||||||||  || || ||||||||| |||| |||||||||  |||||||||||    
T  27007891 cgaataatacatttattcaagaaataaagattacgtcttattcaaaattcaaaaaaaccgattgacatgtatgtaaatctcaacagtcacagcggaatat 27007990  T
Q  109 aa 110  Q
    ||    
T  27007991 aa 27007992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 3671352 - 3671401
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    ||||||||||||||||||||||| |||||| || ||| ||||||||||||    
T  3671352 aatatatttattcaagaaatagatgctacgtcatcatacaaaattcaaaa 3671401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22272785 - 22272931
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22272785 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaaaccaatagacatgtatataaacctcatcagttgcagcggaatataa 22272884  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| |||||| ||||||||||||    
T  22272885 accagagtaatcaaaatatttacatgtcatgaagcaataaattacat 22272931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 23806863 - 23806718
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaa-aaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||| ||||||| |||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||    
T  23806863 cgaataatacatttattcaagaaataaaggctacaccacattcaaaattcaaacaaacaataaacatgtatataaacctcaacagttgcagcggaatata 23806764  T
Q  110 aactagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    ||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  23806763 aaccagagtaagcaacatatacatgttatgaagcaataaattacat 23806718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 12644249 - 12644104
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  12644249 cgaataatacatttattcaagaaatataggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 12644150  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  12644149 accagagtaaattcaa-atatacatgttatgaataaataaattacat 12644104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22282018 - 22282164
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22282018 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaagagacatgtatataaacctcatcagttgcagcggaatataa 22282117  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    |||||| ||||||| |||  ||||||| |||||| || |||||||||    
T  22282118 actagaataatcaaaatatgtacatgtcatgaagcaaaaaattacat 22282164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 38707389 - 38707244
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  38707389 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtacataaacctcaacagtcgcagcggaatataa 38707290  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  38707289 accagagtaaattcaa-atatacatgttatgaataaataaattacat 38707244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 21139743 - 21139888
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  21139743 cgaataatacatttattcaagaaatagaggatacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 21139842  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||||||||||| |||| |||||||||||||    
T  21139843 accagagtaaattcaa-atatacatgttgtgaataaataaattacat 21139888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 22861435 - 22861573
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||    
T  22861435 aatacatttattcaagaaatagaggctacgccacattcaaaattcgaaaaccaataaacatgtatataaacctcaacagttgcaacggaatataaaccag 22861534  T
Q  116 agtaatc--aacatatacatgttatgaagaaataaatta 152  Q
    |||||||  || |||||||||| |||||  |||||||||    
T  22861535 agtaatccaaatatatacatgtcatgaatcaataaatta 22861573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 23003724 - 23003613
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23003724 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 23003625  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  23003624 accagagtaatc 23003613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 19889298 - 19889174
Alignment:
Q  32 aaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa--tcaacatat 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||  |||| ||||    
T  19889298 aaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataaaccagagtaaattcaa-atat 19889200  T
Q  130 acatgttatgaagaaataaattacat 155  Q
    |||||||||||| |||||||||||||    
T  19889199 acatgttatgaataaataaattacat 19889174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 21276936 - 21276788
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca---aaaaccaatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||   |||| ||||| ||||||||||||||||||||||| |||||||||||    
T  21276936 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaata 21276837  T
Q  108 taaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||| |||||||  |||| |||||||||||||||| |||||||||||||    
T  21276836 taaaccagagtaaattcaa-atatacatgttatgaataaataaattacat 21276788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 9655156 - 9655012
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  9655156 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattc-aaaaccaataaacatgtatataaacctcaacagtt-cagcggaatataa 9655059  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| |||||  ||||||||||||    
T  9655058 accagagtaatcaaaatatgtacatgtcatgaatcaataaattacat 9655012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 43645260 - 43645114
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  43645260 cgaataatacatttattcaggaaatagaggctacgccacattcaaaattcaaaaaccgataaacatgtatataaacctcaacagttgcagcgaaatataa 43645161  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| |||||  ||||||||||||    
T  43645160 accagagtaatccaaatatgtacatgtcatgaatcaataaattacat 43645114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 8886069 - 8886179
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  8886069 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaata-acatgtatataaacctcaacagttacagcggaatgtaa 8886167  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  8886168 accagagtaatc 8886179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 22692187 - 22692333
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    ||||| |||| |||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  22692187 tcgaataatacatttattcaataaatagaggctatgccacattcaaaattcaaaa-ccgatagacatgtatataaacttcaacagttacagcggaatata 22692285  T
Q  110 aactagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    ||| ||||||||||| |||  ||||||| ||||| |||||||| ||||    
T  22692286 aaccagagtaatcaaaatatgtacatgtcatgaacaaataaatcacat 22692333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 22696834 - 22696980
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    ||||| |||| |||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  22696834 tcgaataatacatttattcaataaatagaggctatgccacattcaaaattcaaaa-ccgatagacatgtatataaacttcaacagttacagcggaatata 22696932  T
Q  110 aactagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    ||| ||||||||||| |||  ||||||| ||||| |||||||| ||||    
T  22696933 aaccagagtaatcaaaatatgtacatgtcatgaacaaataaatcacat 22696980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 12638582 - 12638437
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  12638582 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 12638483  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  12638482 accagagtaaattcaa-atatacatgttatgaataaataaattacat 12638437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 20629703 - 20629592
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||    
T  20629703 cgaataatacatttattcaagaaatacaggctacgccacattcaaaattcaaaaaacaaaaaacatgtatataaatctcaacagttgcagcggaatataa 20629604  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  20629603 accagagtaatc 20629592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 3801708 - 3801561
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaacca--atagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| || ||||||||||||||||  |  ||||||||||||||||||||||||||| ||||||||||||    
T  3801708 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaaaacgatagacatgtatataaacctcaacagtcgcagcggaatat 3801609  T
Q  109 aaactagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||| ||||| |||| |  |||||||||||||||  ||||||||||||    
T  3801608 aaaccagagtaaatccaagtatacatgttatgaatcaataaattacat 3801561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 15631253 - 15631376
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| ||||||||||||||||||||||||| |||  |||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||||||||    
T  15631253 cgaataatatatttattcaagaaatagaggttacatcacattcaaaattcaaaa-ccaataaacatgtatataaacttcaacagtagcagcggaatataa 15631351  T
Q  111 actagagtaatcaacatatacatgt 135  Q
    |  |||| |||| | ||||||||||    
T  15631352 atcagaggaatccaaatatacatgt 15631376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 24687931 - 24687818
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  24687931 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcagcggaatataa 24687832  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  24687831 atcagagtgatcaa 24687818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 25210507 - 25210620
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  25210507 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaatcgatagacatgtatataaacctcaacagttgcagcggaatataa 25210606  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  25210607 atcagagtgatcaa 25210620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 36893016 - 36892885
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||| |||||||||||||| || |||  |||||||||||| ||||| ||||||||||||||||||| ||| |||||| ||||||    
T  36893016 cgaataatacatttattcaataaatagaggctacgtcatcatctaaaattcaaaaaacaataaacatgtatataaacctcaatagtcgcagcgcaatata 36892917  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  36892916 aaccagagtaatccaaatatacatgtcatgaa 36892885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 8941326 - 8941439
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  8941326 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 8941425  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  8941426 atcagagtgatcaa 8941439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 11233513 - 11233400
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  11233513 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 11233414  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  11233413 atcagagtgatcaa 11233400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 22515360 - 22515247
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  22515360 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 22515261  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  22515260 atcagagtgatcaa 22515247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23818074 - 23818187
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  23818074 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 23818173  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  23818174 atcagagtgatcaa 23818187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 28777962 - 28777849
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  28777962 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 28777863  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  28777862 atcagagtgatcaa 28777849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 24828868 - 24828753
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac--caatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||| |   | ||||||||||||||||| ||||||||||||    
T  24828868 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaaaacaataaaatggcatataaacctcaacagtcgcagcggaatat 24828769  T
Q  109 aaactagagtaatcaa 124  Q
    |||| ||||| |||||    
T  24828768 aaaccagagtgatcaa 24828753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 14908690 - 14908587
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||  ||||| |    
T  14908690 atttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataaatcagagtga 14908591  T
Q  121 tcaa 124  Q
    ||||    
T  14908590 tcaa 14908587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 23772431 - 23772544
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||    
T  23772431 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacggttacagcggaatataa 23772530  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  23772531 atcagagtgatcaa 23772544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 23837649 - 23837539
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| |||||||||||| |   || ||||||||||||||||||||||| |||||||||||||    
T  23837649 cgaataatacatttattcaagaaatagaggctacgtcatcatacaaaattcaaaaccg--taaacatgtatataaacctcaacagtcgcagcggaatata 23837552  T
Q  110 aactagagtaatc 122  Q
    ||| |||||||||    
T  23837551 aaccagagtaatc 23837539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 24833318 - 24833205
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||  |||||  |||| ||  | ||||||||||||||||| |||||| |||||||    
T  24833318 cgaataatacatttattcaagaaatagaggctacgccacattcaaaataaaaaaaaaaataaaccggcatataaacctcaacagtcgcagcgaaatataa 24833219  T
Q  111 actagagtaatcaa 124  Q
    || ||||| |||||    
T  24833218 accagagtgatcaa 24833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 20013021 - 20013129
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||  ||    
T  20013021 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaaccttaacagttacagcggaatataaatcag 20013120  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  20013121 agtgatcaa 20013129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 460449 - 460560
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaac----caatagacatgtatataaacctcaacagttgcagcggaat 106  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||||| |||||     ||||| |||||||||||||||||||||||||||  |||||    
T  460449 cgaataatacatttattcaagaaatagaggttacaccacattcaaaatttaaaaaaaaaacaataaacatgtatataaacctcaacagttgcaatggaat 460548  T
Q  107 ataaactagagt 118  Q
    |||||| |||||    
T  460549 ataaaccagagt 460560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 4450552 - 4450427
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| ||||||||||||||||||||||||| || ||| ||||| |  ||||||| || |||||||||||||| |||||||| ||||||||||||||||||    
T  4450552 aatacatttattcaagaaatagaggctacgtcatcatacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggaatataaacta 4450454  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    |||||  | | |||||||||| |||||    
T  4450453 gagtacaccaaatatacatgtcatgaa 4450427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 33125961 - 33126061
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || | |  || ||||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||    
T  33125961 cgaataatacatttattcaagaaatagagattaagtcttatacaaaattcaaaaaccgatagacatgtatgtaaatctcaacagttacagcggaatataa 33126060  T
Q  111 a 111  Q
    |    
T  33126061 a 33126061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 17398858 - 17398745
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||| ||||||||  || | |  |||||||||||||||||| |||||||||||| |||  |||||||||| |||||||||||||    
T  17398858 cgaataatacatttattcaacaaatagagattatgtcttattcaaaattcaaaaaccgatagacatgtatgtaattctcaacagttacagcggaatataa 17398759  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17398758 atcagagtgatcaa 17398745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 28969810 - 28969940
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || |||||||||||||||  | || |  |||| |||||||  |||||||| |||||||||||||    
T  28969810 cgaataatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-aacatgcatgcatataaatttcaacagtcgcagcggaatata 28969908  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| || | |||||||||| |||||    
T  28969909 aaccagagtattccaaatatacatgtcatgaa 28969940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 6877335 - 6877454
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatata-aacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||       |||| ||||| || |||||||||  |||||||||||    
T  6877335 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaacac------gcatgcatatataatctcaacagtcacagcggaatat 6877428  T
Q  109 aaactagagtaatcaacatatacatg 134  Q
    |||| ||||||||| | |||||||||    
T  6877429 aaaccagagtaatccaaatatacatg 6877454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 34821913 - 34822028
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaa--aaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||  ||  ||| | |||||||||||| ||||||||||||||| |||||||||||    
T  34821913 cgaataatacatttattcaagaaatagagattacgtcttattcaaaataaaataaaaacgatagacatgtatgtaaacctcaacagttacagcggaatat 34822012  T
Q  109 aaactagagtaatcaa 124  Q
    |||  ||||| |||||    
T  34822013 aaatcagagtgatcaa 34822028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 12725939 - 12726055
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa---tagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||| |||||  ||   ||||||||||| ||||||||||||||| ||||||||||    
T  12725939 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattaaaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaata 12726038  T
Q  108 taaactagagtaatcaa 124  Q
     |||  ||||| |||||    
T  12726039 caaatcagagtgatcaa 12726055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Complemental strand, 25422402 - 25422333
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtat 80  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||||||||||||    
T  25422402 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtat 25422333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 25878279 - 25878220
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaa 69  Q
    |||| |||| ||||||||||||||||||||||||| || |||||||||||  ||||||||    
T  25878279 cgaataatacatttattcaagaaatagaggctacggcatcattcaaaatttcaaaaccaa 25878220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 5e-52; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 20947514 - 20947369
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  20947514 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtacataaacctcaacagttgcagcggaatataa 20947415  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  20947414 accagagtaaattcaa-atatacatgttatgaataaataaattacat 20947369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 24498840 - 24498695
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  24498840 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 24498741  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  24498740 accagagtaaattcaa-atatacatgttatgaataaataaattacat 24498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 37846731 - 37846585
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  37846731 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacagttgcagcggaatataa 37846632  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| ||||| |||||||||||||    
T  37846631 accagagtaatccaaatatgtacatgtcatgaataaataaattacat 37846585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 44037152 - 44037006
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  44037152 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccaataaacatgtatataaacttcaacagttgcagcggaatataa 44037053  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    |||||||||||||| |||  ||||||| |||||  ||||||||||||    
T  44037052 actagagtaatcaaaatatgtacatgtcatgaatcaataaattacat 44037006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 20251963 - 20252095
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||| |||||||| |||    
T  20251963 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacaagtatataaacttcaacagtcgcagcgtaatataaaatag 20252062  T
Q  116 agtaatcaacatatacatgttatgaagaaataa 148  Q
    |||||||||||||||||||| ||||| ||||||    
T  20252063 agtaatcaacatatacatgtcatgaataaataa 20252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 22225876 - 22226016
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  22225876 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ctaatagacatgtatataaacctcaacagttacagcggaatataa 22225974  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  22225975 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 22226016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 20896067 - 20895923
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  20896067 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatgaacatgtatataaacctcaacagtcgcagcggaatataa 20895968  T
Q  111 actagagtaa-tcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||| |||| |||||||||| | |||  ||||||||||||    
T  20895967 accagagtaaatcaa-atatacatgtcaagaatcaataaattacat 20895923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 20929367 - 20929476
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  20929367 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaataaccgatagacatgtatataaacctcaacagttgcagcggaatataa 20929466  T
Q  111 actagagtaa 120  Q
    || |||||||    
T  20929467 accagagtaa 20929476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 21857372 - 21857518
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  21857372 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaactaatgaacatgtatataaacctcaacagttgcagcggaatataa 21857471  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || ||| |||||  |  || ||||||| |||||| ||||||||||||    
T  21857472 accagaataatccaagtatgtacatgtcatgaagcaataaattacat 21857518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22351886 - 22352031
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||    
T  22351886 cgaataatacatttattcaagaaatagaagctacgcaacattcaaaattcaaaaaccaataaacatgtatataaacatcaacagtcgcagcagaatataa 22351985  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  22351986 accagagtaaattcaa-atatacatgttatgaataaataaattacat 22352031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 18505262 - 18505393
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||    
T  18505262 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaaaccaataaacatgtatataaacctcatcagtcgcaacggaatata 18505361  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  18505362 aaccagagtaatccaaatatacatgtcatgaa 18505393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 20529367 - 20529477
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  20529367 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccaataaacatgtttataaacctcaacagttgcagcggaatataa 20529465  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  20529466 accagagtaatc 20529477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 141
Target Start/End: Original strand, 35052764 - 35052884
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  35052764 atttattcaagaaatagaggctacgccatcattcaaaattcagaa-ccaataaacatgtatataaacctcaacagtcgcagcggaatataaaccagagta 35052862  T
Q  120 atcaacatatacatgttatgaa 141  Q
     ||||||||||||||| |||||    
T  35052863 ctcaacatatacatgtaatgaa 35052884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22079795 - 22079939
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||| | ||||||||||||    
T  22079795 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaatcaaaaaacaaaaaacatgtatataaacctcaacagtcgaagcggaatataa 22079894  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||  | |||||||||| |||||  ||||||| ||||    
T  22079895 accagagtaatacaaatatacatgtcatgaatcaataaatcacat 22079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 20443627 - 20443736
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||    
T  20443627 cgaataatacatttattcaagaaatagaggctacgccacattaaaaattcaaaatc-aataaacatgtatataaacctcaacagttgcaacggaatataa 20443725  T
Q  111 actagagtaat 121  Q
    |||||||||||    
T  20443726 actagagtaat 20443736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 41217148 - 41217278
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | ||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||  ||||||||||||    
T  41217148 cgaataatacatttattcaagaaatagaagttacgccatcattcaaaattcaaaa-ccaataaacatgtatataaatctcaacagtcacagcggaatata 41217246  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||||||| | ||||||||||| ||||    
T  41217247 aactagagtaatccaaatatacatgttttgaa 41217278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 17146434 - 17146543
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||    
T  17146434 cgaataatacatttattcaagaaatagaggatacaccacattcaaaattcaaaaacaaataaacatgtatataaacctcaacagtcgcagcagaatataa 17146533  T
Q  111 actagagtaa 120  Q
    |  |||||||    
T  17146534 agcagagtaa 17146543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 35935884 - 35935775
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattca--aaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||  |||| ||||| ||| ||||||||||||||||||| ||||||||||||    
T  35935884 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaaaaaacaataaacaggtatataaacctcaacagtcgcagcggaatat 35935785  T
Q  109 aaactagagt 118  Q
    |||| |||||    
T  35935784 aaaccagagt 35935775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 9193921 - 9193786
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||  ||    
T  9193921 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataaatcag 9193822  T
Q  116 agtaatc-aacatatacatgttatgaagaaataaat 150  Q
    ||| ||| || |||||||||| ||||  ||||||||    
T  9193821 agtgatcaaatatatacatgtcatgagcaaataaat 9193786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 5074573 - 5074460
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  5074573 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 5074474  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  5074473 atcagagtgatcaa 5074460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 17002718 - 17002831
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  17002718 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 17002817  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17002818 atcagagtgatcaa 17002831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 20827493 - 20827380
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  20827493 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 20827394  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  20827393 atcagagtgatcaa 20827380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 51450505 - 51450618
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  51450505 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 51450604  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  51450605 atcagagtgatcaa 51450618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 5676925 - 5676802
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| |||||||||||| |||||| |||||||||||||| |||||||| |||||  ||||||    
T  5676925 cgaataatacatttattcaagaaatagaggctacgtcatcatgcaaaattcaaaa-ccaataaacatgtatataaacttcaacagtcgcagcataatata 5676827  T
Q  110 aactagagtaatcaacatatacatg 134  Q
    ||| ||||||||| | |||||||||    
T  5676826 aaccagagtaatccaaatatacatg 5676802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 21652285 - 21652185
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| ||||||||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||    
T  21652285 cgaataatatatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaatctcaacagttacagcggaatataa 21652186  T
Q  111 a 111  Q
    |    
T  21652185 a 21652185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 24522321 - 24522213
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||  ||    
T  24522321 aataaatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataaatcag 24522222  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  24522221 agtgatcaa 24522213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 22408556 - 22408425
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||| ||| ||| ||||| |  |||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  22408556 cgaataatacatttattcaagaaatagaggctacaccatcatacaaaacttcaaaaccaataaacatgtatataaacttcaacagtcgcagtggaatata 22408457  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||  ||| |||||||||| |||||    
T  22408456 aaccagagtacacaaaatatacatgtcatgaa 22408425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 18062226 - 18062113
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| |||||||| ||  |||| |  |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  18062226 cgaataatacatttatttaagaaatatagattacgtcctattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcagcggaatataa 18062127  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  18062126 atcagagtgatcaa 18062113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 21207019 - 21206919
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||    
T  21207019 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggagtataa 21206920  T
Q  111 a 111  Q
    |    
T  21206919 a 21206919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 24570670 - 24570530
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || | |  || ||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  24570670 cgaataatacatttattcaagaaatagagattaagtcttatacaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 24570571  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||  ||||| ||||||||    
T  24570570 atcagagtgatcaaatatatacatgccatgaacaaataaat 24570530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 45049538 - 45049638
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  45049538 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacaacggaatataa 45049637  T
Q  111 a 111  Q
    |    
T  45049638 a 45049638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 155
Target Start/End: Original strand, 22364608 - 22364691
Alignment:
Q  73 acatgtatataaacctcaacagttgcagcggaatataaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||  |||| |||||||||||||||| |||||||||||||    
T  22364608 acatgtatataaacctcaacagtcgcagcggaatataaaccagagtaaattcaa-atatacatgttatgaataaataaattacat 22364691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 41392345 - 41392458
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||| | |||||||||||||| ||| |||||||| ||||||||||||||    
T  41392345 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaacgatagacatgtatatgaacttcaacagtcgcagcggaatataa 41392444  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  41392445 atcagagtgatcaa 41392458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 18603331 - 18603231
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||| |||||||||| |||||||||||| |||| |||||||||| |||||||||||||    
T  18603331 cgaataatacatttattcaagaaatagagattacgtcttattcaaatttcaaaaaccgatagacatgtatgtaaatctcaacagttacagcggaatataa 18603232  T
Q  111 a 111  Q
    |    
T  18603231 a 18603231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 20117425 - 20117325
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| ||| |||||||| |||| |||||||||| |||||||||||||    
T  20117425 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatatacatgtatgtaaatctcaacagttacagcggaatataa 20117326  T
Q  111 a 111  Q
    |    
T  20117325 a 20117325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 49965727 - 49965858
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcc---acattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||| ||||||   | | | ||||||||||| |  ||| |||||||||||||| |||||||| ||||| |||||    
T  49965727 cgaataatacatttattcaagaaatagaggttacgccgtcataattaaaattcaaaacc--ataaacatgtatataaacttcaacagtcgcagcagaata 49965824  T
Q  108 taaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||| ||||||||||| |||||||||| |||||    
T  49965825 taaaccagagtaatcaaaatatacatgtcatgaa 49965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 2423382 - 2423263
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||| |||| ||| |||||||||||| |  ||| |||||||||||||| |||||||| ||      |||||    
T  2423382 cgaataatacatttattcaagaaatagaggctatgccatcatccaaaattcaaaaccatataaacatgtatataaacttcaacagtcgc------atata 2423289  T
Q  110 aactagagtaatcaacatatacatgt 135  Q
    |||||||||| |||||||||||||||    
T  2423288 aactagagtactcaacatatacatgt 2423263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 29136713 - 29136825
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  || ||||||||||||||||| | |||||||||||||||||||||||||  ||||| ||||||||    
T  29136713 cgaataatacatttattcaagaaatagagattacatcatattcaaaattcaaaaacga-tagacatgtatataaacctcaacagccgcagctgaatataa 29136811  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  29136812 atcagagtgatcaa 29136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 21716045 - 21716151
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||| |  |||||||  | |||||||||||||| |||||||| |||||||||||||    
T  21716045 cgaataatacatttattcaagaaatagaggctacgtcatcatacaaaaattcaaaaccatca-acatgtatataaacttcaacagtcgcagcggaatata 21716143  T
Q  110 aactagag 117  Q
    ||||||||    
T  21716144 aactagag 21716151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22033743 - 22033853
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaa--ccaatagacatgtatataaacctcaacagttgcagcggaatataaact 113  Q
    |||| |||||||||||||||||||  |||| |  ||||||||||||||||  || |||||||||||| |||| |||||||||| ||||||||||||||      
T  22033743 aatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaaaccgatagacatgtatgtaaatctcaacagttacagcggaatataaatc 22033842  T
Q  114 agagtaatcaa 124  Q
    ||||| |||||    
T  22033843 agagtgatcaa 22033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 42449620 - 42449512
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| ||| |||||||||||||||  || | |  || ||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||  ||    
T  42449620 aataaattaattcaagaaatagagattaagtcttatacaaaattcaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaatataaatcag 42449521  T
Q  116 agtaatcaa 124  Q
    ||| |||||    
T  42449520 agtgatcaa 42449512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 7642853 - 7642741
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||   |||| | |||||||||||||||| |  |||||||||||| |||| |||||||||| |||||||||| ||    
T  7642853 cgaataatacatttattcaagaaatagatattacgtctcattcaaaattcaaaa-ctgatagacatgtatgtaaatctcaacagttacagcggaatacaa 7642755  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  7642754 atcagagtgatcaa 7642741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 35524726 - 35524637
Alignment:
Q  23 ttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaac 112  Q
    ||||||||||||||||||||||| || ||| ||||| |  ||||||| || ||||| |||||||| |||||||| ||||||||||||||||    
T  35524726 ttattcaagaaatagaggctacgtcatcatacaaaaattcaaaacca-taaacatgcatataaacttcaacagtcgcagcggaatataaac 35524637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 27331419 - 27331365
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||| |||| ||||||||||||||||||||| | |||||||||| |||||    
T  27331419 ctcaacagtcgcagtggaatataaactagagtaatccaaatatacatgtcatgaa 27331365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 9786692 - 9786572
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |       ||||||||||| |  ||| ||||||| |||||  |||||| | |||||||| |||||    
T  9786692 cgaataatacatttattcaagaaatagaggctacac-------aaaattcaaaacc--ataaacatgtacataaatttcaacaatcgcagcgga-tataa 9786603  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||||| |||||||||| |||||    
T  9786602 accagagtaatcaaaatatacatgtcatgaa 9786572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 27331505 - 27331451
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| |||||||||||||||||| |||||| || ||||||||||||||||    
T  27331505 cgaataatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaaa 27331451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 17147 - 17277
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  17147 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaactaataaacatgtatataaacctcaacagtcgcagcggaatataa 17246  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || ||||||||||||||||||||| ||||||    
T  17247 accagagtaatcaacatatacatgctatgaa 17277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 21746 - 21602
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| || || ||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||    
T  21746 cgaataatacatttattcaagaaatagaggctatgctactttcaaaattcaaaaacttataaacatgtatataaacctcaacagttgcagcggaatataa 21647  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||||||||||||||||||||||  ||||||||||||    
T  21646 accagagtaatcaacatatacatgttatgaatcaataaattacat 21602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 5227 - 5081
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5227 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaatcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 5128  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||||||||    
T  5127 accagagtaatccaaatatatacatgtcatgaatcaataaattacat 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 12322 - 12177
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  12322 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaaccgtcgcagcggaatataa 12223  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  12222 accagagtaaattcaa-atatacatgttatgaataaataaattacat 12177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 4933 - 5066
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaac--caatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||   || || |||||||||||||  |||||||| |||||||||||    
T  4933 cgaataatacatttattcaagaaatagaggctacaccatcattcaaaattcaaaaaaaacattaaacatgtatataaaattcaacagtcgcagcggaata 5032  T
Q  108 taaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||| |  ||| ||||||||||||||| |||||    
T  5033 taaaccatggtactcaacatatacatgtcatgaa 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 1 - 77
Alignment:
Q  80 tataaacctcaacagttgcagcggaatataaactagagta-atcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||||||||||||| |||||||||||||||| |||||| ||  | |||||||||||||| | |||||||||||||    
T  1 tataaacctcaacagtcgcagcggaatataaaccagagtagattcaaatatacatgttatggataaataaattacat 77  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 28184 - 28329
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  28184 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaatccaataaacatgtatataaacctcaacagtcgcagcggaatataa 28283  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  28284 accagagtaaattcaa-atatacatgttatgaataaataaattacat 28329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 28622 - 28767
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  28622 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaatccaataaacatgtatataaacctcaacagtcgcagcggaatataa 28721  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  28722 accagagtaaattcaa-atatacatgttatgaataaataaattacat 28767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 50067 - 49921
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  50067 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaatcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 49968  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||||||||    
T  49967 accagagtaatccaaatatatacatgtcatgaatcaataaattacat 49921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 184045 - 184190
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  184045 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 184144  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||| ||| |||||||||||||    
T  184145 accagagtaaattcaa-atatacatgttaagaataaataaattacat 184190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 15338 - 15479
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15338 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttgcagcggaatataa 15437  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  15438 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 15479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 14543 - 14413
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || |||||||||||||||  | |  |  |||| ||||||| |||| |||| |||||||||||||    
T  14543 cgaataatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaactc-atcatgcatgcatataaatctcagcagtcgcagcggaatata 14445  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| | |||||||| |||||    
T  14444 aaccagagtactcaaaagatacatgtcatgaa 14413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 848 - 703
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  848 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 749  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  748 accagagtaaatccaagtatacatgttatgaatcaataaattacat 703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1140 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold1140
Description:

Target: scaffold1140; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 919 - 1065
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  919 cgaataatacatttatttaagaaatagaggctacgccacattcaatattcaaaaaccaataaacatgtatataaacctcaacagttgcaacggaatataa 1018  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || ||||||||||||||||  ||||||||||||    
T  1019 accagagtaatccaaatatatacatgttatgaatcaataaattacat 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 11635 - 11489
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  11635 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagctgaatataa 11536  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  || |||| |||||  ||||||||||||    
T  11535 accagagtaatcaaaatatgtatatgtcatgaatcaataaattacat 11489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 7665 - 7520
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||    
T  7665 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaatagtcgcagcggaatataa 7566  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||||| |||||||||| |||||||||||||    
T  7565 accagagtaaattcaa-atataaatgttatgaataaataaattacat 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 200 - 54
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  200 cgaataatacatttattcaagaaatagaggttactccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 101  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| |||||  ||||||||||||    
T  100 accagagtaatcaaaatatgtacatgtcatgaatcaataaattacat 54  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 138
Target Start/End: Complemental strand, 15648 - 15521
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  15648 cgaataatacatttatttaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaatagttgtagcagaatataa 15549  T
Q  111 actagagtaatcaacatatacatgttat 138  Q
    || |||||||||||||||||||||||||    
T  15548 accagagtaatcaacatatacatgttat 15521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 26052 - 26197
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||| | ||||||||||||||    
T  26052 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaataacatgtatataaacatcaacaatcgcagcggaatataa 26151  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  26152 accagagtaaatccaagtatacatgttatgaatcaataaattacat 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 249775 - 249629
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  249775 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcgaaaaccaataaacatgtatataaacctcaacagttgcaacggaatataa 249676  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||||||||    
T  249675 accagagtaatccaaatatatacatgtcatgaatcaataaattacat 249629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 96; Significance: 3e-47; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 129444 - 129325
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  129444 aatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttacagcgtaatataaactag 129345  T
Q  116 agtaatcaacatatacatgt 135  Q
    ||||||| | ||||| ||||    
T  129344 agtaatccaaatatatatgt 129325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 72701 - 72590
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  72701 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttacagcgaaatataa 72602  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  72601 accagagtaatc 72590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 77082 - 76971
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  77082 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttacagcgaaatataa 76983  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  76982 accagagtaatc 76971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 192389 - 192535
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||| ||||||||||    
T  192389 cgaataatacatttattcaagaaatagaggctatgccacattcaatattcaaaaaccaataaacatatatattaacctcaacagttgcaacggaatataa 192488  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || ||||||||||||||||  ||||||||||||    
T  192489 accagagtaatccaaatatatacatgttatgaatcaataaattacat 192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 257128 - 257084
Alignment:
Q  97 gcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    |||||||||||||||| ||||||||| | |||||||||| |||||    
T  257128 gcagcggaatataaaccagagtaatccaaatatacatgtcatgaa 257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 269932 - 270063
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  269932 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 270031  T
Q  111 actagagt-aatcaacatatacatgttatgaa 141  Q
    || ||||| |||| | |||||||||| |||||    
T  270032 accagagtaaatccaaatatacatgtcatgaa 270063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 235819 - 235941
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||| ||||||||||| || ||| ||||| |  |||||||  | |||||||||||| | |||||||| |||||||||||||    
T  235819 cgaataatacatttattcaagaagtagaggctacgtcatcatacaaaaattcaaaaccacaa-acatgtatataa-cttcaacagtcgcagcggaatata 235916  T
Q  110 aactagagtaatcaacatatacatg 134  Q
    ||| ||||||||| | |||||||||    
T  235917 aaccagagtaatccaaatatacatg 235941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 236120 - 236166
Alignment:
Q  88 tcaacagttgcagcggaatataaactagagtaatcaacatatacatg 134  Q
    |||||||| |||||||||||||||| ||||||||| | |||||||||    
T  236120 tcaacagtcgcagcggaatataaaccagagtaatccaaatatacatg 236166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 10122 - 10267
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  10122 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaaagacatgtatatgaacctcaacagttgctgcggaatataa 10221  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||||| |||| |  |||||||||||||||  |||||| |||||    
T  10222 actagagtaaatccaagtatacatgttatgaatcaataaactacat 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 19547 - 19692
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  19547 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaaaagacatgtatatgaacctcaacagttgctgcggaatataa 19646  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||||| |||| |  |||||||||||||||  |||||| |||||    
T  19647 actagagtaaatccaagtatacatgttatgaatcaataaactacat 19692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 407 - 552
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  407 cgaataatacatttattcaagaaatagaggctacgcaacattaaaaattcaaaaaccaataaacatgtatataaacctcaacaatcgcagcggaatataa 506  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||||||| |||||||||||||    
T  507 accagagtaaattcaa-atatacatgttatgaataaataaattacat 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 14327 - 14182
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  14327 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaactgtcgcagcggaatataa 14228  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  ||||  |||| |||||||||| |||||||||||||    
T  14227 accagagtaaattcaa-ttatatatgttatgaataaataaattacat 14182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 2069 - 2202
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaac--caatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||   || || |||||||||||||  |||||||| |||||||||||    
T  2069 cgaataatacatttattcaagaaatagaggctacaccatcattcaaaattcaaaaaaaacattaaacatgtatataaaattcaacagtcgcagcggaata 2168  T
Q  108 taaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||| |  ||| ||||||||||||||| |||||    
T  2169 taaaccatggtactcaacatatacatgtcatgaa 2202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 10186 - 10041
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  10186 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccgatagacatgtatataaacctcaacagttacagcggaatataa 10088  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| ||||| |||||||| ||||    
T  10087 accagagtaatcaaaatatgtacatgtcatgaacaaataaatcacat 10041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 13487 - 13342
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  13487 cgaataatacatttattcaagaaatagaggctacgccacattcgaaattcaaaaatcaataaacatgtatataaacctcaacagtcgcagcggaatataa 13388  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| ||||| |||||||||| |||||||||||||    
T  13387 accagagtaaattcaa-atatagatgttatgaataaataaattacat 13342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 36027 - 36138
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36027 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagttgcagcggaatataa 36126  T
Q  111 actagagtaatc 122  Q
    || | |||||||    
T  36127 accaaagtaatc 36138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 39836 - 39723
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  39836 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 39737  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  39736 atcagagtgatcaa 39723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 218016 - 217870
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||    
T  218016 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatcaataaacatgtatataaacctcaacggttgcagcggaatataa 217917  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  ||||||| ||||    
T  217916 accagagtaatccaaatatatacatgtcatgaatcaataaatcacat 217870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 4825 - 4938
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  4825 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 4924  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  4925 atcagagtgatcaa 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 7412 - 7272
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  7412 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaa-ccgatagacatgtatataaacctcaacagttgcagcggaatataa 7314  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  7313 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 7272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 59699 - 59559
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  59699 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaa-ccgatagacatgtatataaacctcaacagttgcagcggaatataa 59601  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaat 150  Q
    || ||||||||||| |||  ||||||| ||||| ||||||||    
T  59600 accagagtaatcaaaatatgtacatgtcatgaacaaataaat 59559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 46209 - 46065
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  46209 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaa-caataaacatgtatataaacctcaacagtcgcagcggaatataa 46111  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||||| |||| |  |||||||||||||||  |||||| |||||    
T  46110 actagagtaaatccaagtatacatgttatgaatcaataaagtacat 46065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 37368 - 37498
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||| ||||||||||||||||| || |||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||    
T  37368 cgaataatacatttatttaagaaatagaggctacgtcatcattcaaaattcaaaa-ccaataaacatgtatataaatctcaacagtcgcagcggaatata 37466  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  37467 aacaagagtaatccaaatatacatgtcatgaa 37498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 77204 - 77346
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||    
T  77204 cgaataatacatctattcaagaaatagaggctacaccacattcaaaattcaaaaaccaataaacatgtatataaaccgtaacagtcgcagcggaatataa 77303  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    |||  |||||||||||||||||||| |||||  ||||||||||||    
T  77304 act--agtaatcaacatatacatgtcatgaatcaataaattacat 77346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 26775 - 26920
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  26775 cgaataatacatttattcaagaaatagaggctacgtcacattcaaaattcaaaaaccaataaacatgtatataaacctcaacaatcgcagcggaatataa 26874  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  26875 acaagagtaaatccaagtatacatgttatgaatcaataaattacat 26920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 66772 - 66632
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||| |||||||||||||| |||||||||||| |||| |||||| ||| |||||||||| ||    
T  66772 cgaataatacatttattcaagaaatagagattacgtcttatttaaaattcaaaaaccgatagacatgtatctaaatctcaacggttacagcggaatacaa 66673  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||  ||||| ||||||||    
T  66672 atcagagtgatcaaatatatacatgccatgaacaaataaat 66632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 3484 - 3340
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||    
T  3484 cgaataatatatttattcacgaaatagaggctacaccacattcaaaaatcaaaaaccaataaacatgtatataaacctcaacagtcgcggcggaatataa 3385  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||| | |||||||||| | |||  ||||||||||||    
T  3384 accagagtaatccaaatatacatgtcaagaatcaataaattacat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 156
Target Start/End: Complemental strand, 17474 - 17328
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| ||||||||||||||    
T  17474 cgaataatacatttatttaagaaatataggctacgccacattcaaaattcaaaaaccaataaacatgtatataatcttcaacagtcgcagcggaatataa 17375  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacatt 156  Q
    || |||||||  |||| |||||||||||||||| ||||||||||||||    
T  17374 accagagtaaattcaa-atatacatgttatgaataaataaattacatt 17328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2147 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold2147
Description:

Target: scaffold2147; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 148 - 294
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  148 cgaataataaatttattcaagaaatagaggctacaccacattcaaaatttaaaaaccaataaacatgtatataaacctcaacagttgcagcgaaatataa 247  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || |||||||||| |||||  | ||||||||||    
T  248 accagagtaatccaaatatatacatgtcatgaatcagtaaattacat 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 14200 - 14345
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||    
T  14200 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ctgatagacatgtatataaacctcaacagttacagcggaatataa 14298  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| ||||| |||||||| ||||    
T  14299 accagagtaatcaaaatatgtacatgtcatgaacaaataaatcacat 14345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 27724 - 27841
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  27724 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaa-ccgatagacatgtatataaacctcaacagttacagcggaatataa 27822  T
Q  111 actagagtaatcaacatat 129  Q
    || ||||||||||| ||||    
T  27823 accagagtaatcaaaatat 27841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 53552 - 53697
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  53552 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa-ccaataaacatgtatataaacctcaatagttgcagcggaatataa 53650  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || ||||||| |||||  ||||||||||||    
T  53651 accagagtaatccaaatatgtacatgtcatgaatcaataaattacat 53697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1388 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1388
Description:

Target: scaffold1388; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 1624 - 1764
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactag 115  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| |||||| ||||||||| ||    
T  1624 aatacatttattcaagaaatagaggctacgccacattcagaattcaaaaaccaataaacatgtacataagcctcaacagtcgcagcgaaatataaaccag 1723  T
Q  116 agtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||||  |||| |||||||||||||||| |||||||||||||    
T  1724 agtaaattcaa-atatacatgttatgaataaataaattacat 1764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 7470 - 7369
Alignment:
Q  21 atttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  7470 atttattcaagaaatagaggctacgccactttcaaaattcaaaaaccaataaacatgtatataaacctcaacagttacagcggaatataaaccagagtaa 7371  T
Q  121 tc 122  Q
    ||    
T  7370 tc 7369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 53889 - 53744
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||| ||||    
T  53889 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagtggaaaataa 53790  T
Q  111 actagagt-aatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||| |||| |  |||||||||||||||  ||||||||||||    
T  53789 accagagtaaatccaagtatacatgttatgaatcaataaattacat 53744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 24692 - 24548
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||    
T  24692 cgaataatacatttattcaagaaatagaggctatgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgtagcggaatataa 24593  T
Q  111 actagagtaatcaacatatacatgttatgaagaaataaattacat 155  Q
    || ||||||||  | |||||||| | |||||  ||||||| ||||    
T  24592 accagagtaatacaaatatacatttcatgaatcaataaatcacat 24548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 44038 - 44150
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||    
T  44038 cgaataatacatttattcaagaaatagaggttacgccacattcaaaattcaaaaaccgataaacatgtatataaacctcaacatttgcagcggaatataa 44137  T
Q  111 actagagtaatca 123  Q
    || ||||||||||    
T  44138 accagagtaatca 44150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 30257 - 30382
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  30257 cgaataatacatttattcaagaaatagaggctacgccatcatccaaaattcaaaaaccaataaacatgtatataaaccccaacagtcgcagcggaatata 30356  T
Q  110 aactagagtaatcaacatatacatgt 135  Q
    ||   |||||||| | ||||||||||    
T  30357 aatctgagtaatccaaatatacatgt 30382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 30720 - 30865
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||  | | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30720 cgaataatacatttattcaagaaatagaggctaaacaaaattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 30819  T
Q  111 actagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||  |||| |||||||||||| ||| |||||||||||||    
T  30820 accagagtaaattcaa-atatacatgttaagaataaataaattacat 30865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 50928 - 51074
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||  || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  50928 cgaataatacatttattcaagaaatagagaatacaacaaattcaaaattcaaaaaccgatagacatgtatataaacctcaacatttgcagcggaatataa 51027  T
Q  111 actagagtaatcaacata--tacatgttatgaagaaataaattacat 155  Q
    || ||||||||||| |||  ||||||| ||||| |||||||||||||    
T  51028 accagagtaatcaaaatatgtacatgtcatgaacaaataaattacat 51074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 20360 - 20507
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaatt--caaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||   ||||| ||||| ||||| |||||||| |||||||||||||||||||||    
T  20360 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattaaaaaaaaacaataaacatgaatataaacttcaacagttgcagcggaatat 20459  T
Q  109 aaactagagtaa--tcaacatatacatgttatgaagaaataaattacat 155  Q
    |||| |||||||  |||| |||||||||||||||| |||||||||||||    
T  20460 aaaccagagtaaattcaa-atatacatgttatgaataaataaattacat 20507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 15980 - 16110
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  15980 cgaataatacatttattcaagaaatagaggcaaaaccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataa 16079  T
Q  111 actagagtaatcaacatatacatgttatgaa 141  Q
    || | ||||||| | |||||||||| |||||    
T  16080 accaaagtaatccaaatatacatgtcatgaa 16110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 13422 - 13314
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13422 cgaataatacatttattcaagaaatagaggctaggccacattcaaaattcaaaaaccgata-acatgtatataaacctcaacagttgcagcggaatataa 13324  T
Q  111 actagagtaa 120  Q
    || |||||||    
T  13323 accagagtaa 13314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 5823 - 5726
Alignment:
Q  22 tttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||  |||||||||||| |||||||    
T  5823 tttattcaagaaatagaggctaggccacattcaaaattcaaaaaccgata-acatgtatataaacttcaacagttgccacggaatataaaccagagtaa 5726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 27872 - 27979
Alignment:
Q  17 atatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagaca--tgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||| |||||| ||||||||||||||| |    
T  27872 atatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtgtatataaacctcgacagttacagcggaatataaacca 27971  T
Q  115 gagtaatc 122  Q
    ||||||||    
T  27972 gagtaatc 27979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1610 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1610
Description:

Target: scaffold1610; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 493 - 348
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||    
T  493 cgaataatacatttattcaagaaatagaggctacgccacattaaaaattcaaaatc-aataaacatgtatataaacctcaacagttgcaacggaatataa 395  T
Q  111 actagagtaat--caacatatacatgttatgaagaaataaattacat 155  Q
    |||||||||||   || || ||||||| |||||  ||||||||||||    
T  394 actagagtaatacaaatatgtacatgtcatgaatcaataaattacat 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1605 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1605
Description:

Target: scaffold1605; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 1086 - 1231
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||||    
T  1086 cgaataatacatttattcaagaaatagaggctacgccacattaaaaattcaaaatc-aataaacatgtatataaacctcaacagttgcaacggaatataa 1184  T
Q  111 actagagtaat--caacatatacatgttatgaagaaataaattacat 155  Q
    |||||||||||   || || ||||||| |||||  ||||||||||||    
T  1185 actagagtaatacaaatatgtacatgtcatgaatcaataaattacat 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 19868 - 19722
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  19868 cgaataatacatttattcaagaaatagaggctaggccacattcaaaattcaaaattcaataaacatgtatataaaccccaacagttgcaacggaatataa 19769  T
Q  111 actagagtaatc--aacatatacatgttatgaagaaataaattacat 155  Q
    || |||||||||  || || |||||||  |||| |||||||||||||    
T  19768 accagagtaatccaaatatgtacatgtcgtgaataaataaattacat 19722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 3733 - 3851
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||| ||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3733 cgaataatacattaattcaagaaatagaggctacgacacttccaaaattcaaaaaccgatagacatgtatataaatctcaacagttgcagcggaatataa 3832  T
Q  111 actagagtaatcaacatat 129  Q
    || ||||||||||| ||||    
T  3833 accagagtaatcaaaatat 3851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 83836 - 83742
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaa 105  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  83836 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaa 83742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 59475 - 59606
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    ||||| |||| |||||||||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||    
T  59475 tcgaataatacatttattcaataaatagaggctacgccatcatttaaaattcaaaa-ccaataaacatgtatataaacctcaacagtcgcagcggaatat 59573  T
Q  109 aaactagagtaatcaacatatacatgttatgaa 141  Q
    |||| ||||||||| | |||||||||| |||||    
T  59574 aaaccagagtaatccaaatatacatgtcatgaa 59606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 77; Significance: 7e-36; HSPs: 5)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 130463 - 130339
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||| ||||||||| | || |||||||||    
T  130463 cgaataatacatttattcaagaaatagaggctacgccacattcaaaaatcaaaaaccgataaacatatatataaatctcaacagtcgtagtggaatataa 130364  T
Q  111 actagagtaatcaacatatacatgt 135  Q
    |||||||||||| | ||||||||||    
T  130363 actagagtaatccaaatatacatgt 130339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 134045 - 133933
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatc 122  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||| |||||| |||||| ||||||||| |||||||||||||||| |||||||||    
T  134045 ttattcaagaaatagaggctacgccacattcaaaaataaaaaaccgataaacatgtttataaatctcaacagtcgcagcggaatataaaccagagtaatc 133946  T
Q  123 aacatatacatgt 135  Q
     | ||||||||||    
T  133945 caaatatacatgt 133933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 20485 - 20614
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||| |||| || ||| |||||||||||| |  ||| |||||||||||||| |||||||| |||| ||||||||    
T  20485 cgaataatacatttattcaagaaatagaggttacgtcatcatacaaaattcaaaacc--ataaacatgtatataaacttcaacagtcgcagtggaatata 20582  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  20583 aaccagagtaatcgaaatatacatgtcatgaa 20614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 28060 - 28189
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||| ||||||||||||| || ||| |||||||||||| |  |||  |||||||||||||  ||||||| |||||||||||||    
T  28060 cgaataatacatttattcaagcaatagaggctacgtcatcatacaaaattcaaaacc--ataatcatgtatataaactccaacagtcgcagcggaatata 28157  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  28158 aaccagagtaatccaaatatacatgtcatgaa 28189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 34068 - 33994
Alignment:
Q  50 attcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaa 124  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||  ||||| |||||    
T  34068 attcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagtcgcagcggaatataaatcagagtgatcaa 33994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 12177 - 12287
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  12177 cgaataatacatttattcaagaaatagaggttacgccacatgcaaaattcaaaaaccgata-agatgtatataaacctcaacagttgcagcggaatataa 12275  T
Q  111 actagagtaatc 122  Q
    || |||||||||    
T  12276 accagagtaatc 12287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 24976 - 24845
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||  || | ||||||||    
T  24976 cgaataatacatttattcaagaaatagaggctacgccatcatccaaaattcaaaaaccaataaacatgtatataaacctcaacaggcgctgtggaatata 24877  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  24876 aaccagagtaatccaaatatacatgtcatgaa 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 29905 - 29796
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||| ||||||||||    
T  29905 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaaatc-ataaacatgtatataaacctcaacagtcgcaacggaatataa 29807  T
Q  111 actagagtaat 121  Q
    || ||||||||    
T  29806 accagagtaat 29796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 26575 - 26611
Alignment:
Q  105 atataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  26575 atataaactagagtactcaacatatacatgtcatgaa 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 91399 - 91290
Alignment:
Q  33 aatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaacatatac 131  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||| | ||||||    
T  91399 aatagaggctacgccatcatccaaaattcaaaaaccaataaacatttatataaacctcaacagtcgcagcggaatataaaccagagtaatccaaatatac 91300  T
Q  132 atgttatgaa 141  Q
    ||||||||||    
T  91299 atgttatgaa 91290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 1081 - 970
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||| |||||||    
T  1081 cgaataatacatttattcaagaaatagaggctacaccacattcaaaattaaaaaaccaattaacatgtatataaacctcaacagttacagcgaaatataa 982  T
Q  111 actagagtaatc 122  Q
    |  |||||||||    
T  981 atcagagtaatc 970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 90346 - 90453
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  90346 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcagcggaatataa 90445  T
Q  111 actagagt 118  Q
    || |||||    
T  90446 accagagt 90453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 27053 - 26930
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||||| |||| |||||| |||||||||||||| ||||||||  ||||||||||||    
T  27053 cgaataatacatttattcaagaaatagaggctacgtcatcatccaaaatttaaaa-ccaataaacatgtatataaacttcaacagtcacagcggaatata 26955  T
Q  110 aactagagtaatcaacatatacatg 134  Q
    ||| |||||| |||| |||||||||    
T  26954 aaccagagtactcaaaatatacatg 26930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 141
Target Start/End: Complemental strand, 66984 - 66853
Alignment:
Q  10 tcgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    ||||| |||| ||||||||||||||||||||||| |||| ||| ||||| |  ||||||| || ||||||||| |||| |||||||| ||||||||||||    
T  66984 tcgaataatacatttattcaagaaatagaggctatgccatcatacaaaaattcaaaacca-taaacatgtataaaaacttcaacagtcgcagcggaatat 66886  T
Q  109 aaactagagtaatcaacatatacatgttatgaa 141  Q
    |||| ||||||||||| |||||||||| |||||    
T  66885 aaaccagagtaatcaaaatatacatgtcatgaa 66853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 139065 - 138935
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||| |||| ||| |||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||||    
T  139065 cgaataatacatttattcaagaaatagaggctatgccatcatccaaaattcaaaa-ccaataaacatgcatataaacctcaacagtcgcagcggaatata 138967  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  138966 aaccagagtaatccaaatatacatgtcatgaa 138935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 76195 - 76325
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||  || ||| ||||||| |||| |||||| |||||||||||||| | ||||||  ||| ||||||||    
T  76195 cgaataatacatttattcaagaaatagaggctacatcatcatccaaaatttaaaa-ccaataaacatgtatataaactttaacagtcacagtggaatata 76293  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| || | |||||||||| |||||    
T  76294 aaccagagtactcgaaatatacatgtcatgaa 76325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 140
Target Start/End: Original strand, 2660 - 2785
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||       
T  2660 aatacatttattcaagaaatagaggctacaccatcatccaaaattcaaaaaccaataaacatgaatataaacctcaacagtcgcagcggaatataaatct 2759  T
Q  115 gagtaatcaacatatacatgttatga 140  Q
    |||||||| | |||||||||| ||||    
T  2760 gagtaatccaaatatacatgtcatga 2785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 12111 - 12225
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||| ||||| ||||||    
T  12111 atttattcaagaaatagaggctacgtcatcattcaaaattcaaaa-ccaataaacatgtatataaacctcaacagtcacagcggaatttaaaccagagta 12209  T
Q  120 atcaacatatacatgt 135  Q
    ||| | ||||||||||    
T  12210 atccaaatatacatgt 12225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 5723 - 5606
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| || |||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||    
T  5723 cgaataatacatttattcaagaaatagaggttatgccacattcaaaattcaaaa-cggatagacatgtatataaacctcaacagttacagcggaatataa 5625  T
Q  111 actagagtaatcaacatat 129  Q
    |  ||||| ||||| ||||    
T  5624 atcagagtgatcaaaatat 5606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 17644 - 17531
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  17644 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccaatagacatgtatgtaaacctcaacagttacagcggaatataa 17545  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  17544 atcagagtgatcaa 17531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 18111 - 17998
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  18111 cgaataatacatttattcaagaaatagagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacctcaacagtcgcaacggaatataa 18012  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  18011 atcagagtgatcaa 17998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 24797 - 24937
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  24797 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 24896  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  24897 atcagagtgatcaaatatatacatgtcatgagcaaataaat 24937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 20542 - 20682
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  20542 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttatagcggaatataa 20641  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  20642 atcagagtgatcaaatatatacatgtcatgagcaaataaat 20682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 12297 - 12200
Alignment:
Q  23 ttattcaagaaatagaggctacgccacattcaaaa-ttcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaa 120  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||||||||||| |||||||    
T  12297 ttattcaagaaatagaggctacgccgcattcaaaaattcaaaaac-aataatcatgtatataaacctcaacagtcgcagcggaatataaaccagagtaa 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 41695 - 41812
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || ||||||||||||||||| ||||| ||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||    
T  41695 cgaataatacatatattcaagaaatagaggttacgctacattcaaaattcaaaa-cggatagacatgtatataaacctcaacagttacagcggaatataa 41793  T
Q  111 actagagtaatcaacatat 129  Q
    |  ||||| ||||| ||||    
T  41794 atcagagtgatcaaaatat 41812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1148 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1148
Description:

Target: scaffold1148; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 238 - 125
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  238 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 139  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  138 atcagagtgatcaa 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 16212 - 16099
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  16212 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 16113  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  16112 atcagagtgatcaa 16099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 33008 - 33121
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  33008 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 33107  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  33108 atcagagtgatcaa 33121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 29245 - 29358
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| ||||||||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| ||    
T  29245 cgaataatatatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatacaa 29344  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  29345 atcagagtgatcaa 29358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 8669 - 8809
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || | |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  8669 cgaataatacatttattcaagaaatagagattatgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 8768  T
Q  111 actagagtaatc-aacatatacatgttatgaagaaataaat 150  Q
    |  ||||| ||| || |||||||||| ||||  ||||||||    
T  8769 atcagagtgatcaaatatatacatgtcatgagcaaataaat 8809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 7048 - 7180
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattc-aaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||| ||  ||| ||| | |||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  7048 cgaataatacatttattcaagaaatagaggttattccatcatacaaaaatttaaaaaccaataaacatgtatataaacttcaacagtcgcagcggaatat 7147  T
Q  109 aaactagagtaatcaacatatacatgttatgaa 141  Q
    |||| ||||||||| | |||||||||| |||||    
T  7148 aaaccagagtaatccaaatatacatgtcatgaa 7180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 14131 - 14002
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaa-ttcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||| |||||||||| ||||| ||||||||||| ||||||  |||||| |||||||||||||| |||| ||| |||||||||||||    
T  14131 cgaataatacatttattcgagaaatagagactacgtcacattcaaaaattcaaa--ccaataaacatgtatataaacttcaatagtcgcagcggaatata 14034  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  14033 aaccagagtaatccaaatatacatgtcatgaa 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 37184 - 37284
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||| |||     ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  37184 cgaataatacatttattcaagaaatagaggttacatattattcaaaattcaaaaaccaatagacatgtatgtaaacctcaacagttacagcggaatataa 37283  T
Q  111 a 111  Q
    |    
T  37284 a 37284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 198322 - 198235
Alignment:
Q  54 aaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||| | |||||||||| |||||    
T  198322 aaaattcaaaaaccaataaacatgtatataaacctcaacagtcgcagcggaatataaaccatagtaatccaaatatacatgtcatgaa 198235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 331416 - 331362
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||||||||||    
T  331416 cgaataatacatttattcaagaaatagaggctacgtcatcatccaaaattcaaaa 331362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 1689 - 1564
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    |||| |||||||||||||||||||||||||||| ||| | |||||  |||| ||| | |||||||||||||| |||||||| |||||||||||||||| |    
T  1689 aatacatttattcaagaaatagaggctacgccatcataccaaatttcaaaatcaaaa-acatgtatataaacttcaacagtcgcagcggaatataaacca 1591  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    |||||||| | |||||||||| |||||    
T  1590 gagtaatccaaatatacatgtcatgaa 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 3839 - 3726
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || | |  |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  3839 cgaataatacatttattcaagaaatagagattatgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 3740  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  3739 atcagagtgatcaa 3726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 5119 - 4988
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || ||||||||||||||||   || |  |||| |||||| |||||||||| |||||||||||||    
T  5119 cgaataatacatttattcaagaaatagatgctacgtcatcattcaaaattcaaaactaaacatgcatgcatataatcctcaacagtcgcagcggaatata 5020  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| |||||| |||| |||||||||| |||||    
T  5019 aaccagagtactcaaaatatacatgtcatgaa 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 5452 - 5582
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||||||||||||| ||  ||||| |  ||||||| || |||||||||||||| |||||||| |||||||| ||||    
T  5452 cgaacaatacatttattcaagaaatagaggctacgccatcagacaaaaattcaaaacca-taaacatgtatataaacttcaacagtcgcagcggagtata 5550  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  5551 aaccagagtaatccaaatatacatgtcatgaa 5582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 2190 - 2307
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| || ||||||||||||||||  ||||| ||||||||||||||||| |  |||||||||||||||||||| ||||||| |||||||||||||    
T  2190 cgaataatacatatattcaagaaatagagattacgctacattcaaaattcaaaa-cggatagacatgtatataaaccttaacagttacagcggaatataa 2288  T
Q  111 actagagtaatcaacatat 129  Q
    |  ||||| ||||| ||||    
T  2289 atcagagtgatcaaaatat 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 34430 - 34543
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||||||||||| |||||||||||| ||||||| ||||||| || ||||||||||    
T  34430 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaacctaaacagttacaacggaatataa 34529  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  34530 atcagagtgatcaa 34543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 4048 - 4163
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaa-attcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagt 118  Q
    ||||||||||||||||||||||| | || ||| |||| |||| |||||||||| ||||||||||||||||||||||| | ||| |||||||||| |||||    
T  4048 atttattcaagaaatagaggctatgtcatcatacaaagattc-aaaaccaataaacatgtatataaacctcaacagtcgtagcagaatataaaccagagt 4146  T
Q  119 aatcaacatatacatgt 135  Q
    | |||| ||||||||||    
T  4147 actcaagatatacatgt 4163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Complemental strand, 7674 - 7544
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| ||||||||||||||||||||||||| || ||| ||||| |  ||||||| || |||||||||||||| |||||||| ||| || ||||||    
T  7674 cgaataatacatttattcaagaaatagaggctacgtcatcatacaaaaattcaaaacca-taaacatgtatataaacgtcaacagtcgcatcgaaatata 7576  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||| ||||||||| | |||||||||| |||||    
T  7575 aaccagagtaatccaaatatacatgtcatgaa 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 31380 - 31511
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || |||||||| |||||||  ||| |  |||| |||||| |||||||||| |||||||||||||    
T  31380 cgaataatacatttattcaagaaatagatgctacgtcaacattcaaatttcaaaactcaacatgcatgcatataatcctcaacagtcgcagcggaatata 31479  T
Q  110 aactagagtaatcaacatatacatgttatgaa 141  Q
    ||  |||||| |||| |||||||||| |||||    
T  31480 aatcagagtattcaaaatatacatgtcatgaa 31511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 13590 - 13723
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcgga--ata 107  Q
    |||| |||| ||||||||||||||||||||||||| || ||| |||||||  |||||||| |  |||| |||||||| |||||||| ||||| ||  |||    
T  13590 cgaataatacatttattcaagaaatagaggctacgtcatcatccaaaatttcaaaaccaacatgcatgcatataaacttcaacagtcgcagcagaatata 13689  T
Q  108 taaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||| |||||| ||||||||||||||| |||||    
T  13690 taaaccagagtactcaacatatacatgtcatgaa 13723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 67691 - 67578
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| ||||||||||||||||||   |||| |  |||||||||||||||||| |||||||||||| |||| |||||||||| |||| ||||||||    
T  67691 cgaataatacatttattcaagaaatagacattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaatctcaacagttacagctgaatataa 67592  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  67591 atcagagtgatcaa 67578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 87052 - 87165
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  || |    ||| |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  87052 cgaataatacatttattcaagaaatagagtttatgttttatttaaaattcaaaaaccgatagacatgtatgtaaacctcaacagttacagcggaatataa 87151  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  87152 atcagagtgatcaa 87165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 2535 - 2643
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||| |||   || |  |||| ||||||| ||||||||| ||||||||||||||    
T  2535 cgaataatacatttattcaagaaatagatgctacgtcacattcaaaattccaaacataacatgcatgcatataaatctcaacagtcgcagcggaatataa 2634  T
Q  111 actagagta 119  Q
    || ||||||    
T  2635 accagagta 2643  T

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Target: scaffold0270 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 24259 - 24343
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagt 95  Q
    |||| |||| ||||||| |||||||| ||  |||| || |||||||||||||||||| |||||||||||||||||||||||||||    
T  24259 cgaataatacatttattaaagaaataaagattacgtcatattcaaaattcaaaaaccgatagacatgtatataaacctcaacagt 24343  T

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Target: scaffold0115 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 697 - 797
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  ||||    |||||||||||||||||| ||||||| |||| |||| |||||||||| |||||||||||||    
T  697 cgaataatacatttattcaagaaatagagattacgtattattcaaaattcaaaaaccgatagacaagtatgtaaatctcaacagttacagcggaatataa 796  T
Q  111 a 111  Q
    |    
T  797 a 797  T

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Target: scaffold2007 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 54 - 1
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaa 64  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaaaa 1  T

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Target: scaffold0673 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 4345 - 4272
Alignment:
Q  68 aatagacatgtatataaacctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    |||| ||||||||||||| |||||||||  ||||||||||||||| |||||| ||||||||||||||| |||||    
T  4345 aataaacatgtatataaatctcaacagtcacagcggaatataaacaagagtactcaacatatacatgtcatgaa 4272  T

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Target: scaffold0010 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 139384 - 139272
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||| || |||||||||||| |||| |||||||||| |||||||||| ||    
T  139384 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaa-ccgatagacatgtatgtaaatctcaacagttacagcggaatacaa 139286  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  139285 atcagagtgatcaa 139272  T

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Target: scaffold1124 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 1591 - 1500
Alignment:
Q  18 tatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    ||||||||||||||||||||||  |||| |  ||||||||||||||| || |||||||||||| |||| |||||||||| ||| |||||||||    
T  1591 tatatttattcaagaaatagagattacgtcttattcaaaattcaaaa-ccgatagacatgtatgtaaatctcaacagttacagtggaatataa 1500  T

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Target: scaffold0316 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 19974 - 20066
Alignment:
Q  28 caagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagta 119  Q
    |||||||||||||||||| || ||||||||| |  |||||||||| ||||||||||||| ||||||| | ||| |||||||||||| ||||||    
T  19974 caagaaatagaggctacgtcatcattcaaaaattcaaaaccaataaacatgtatataaatctcaacaatcgcaacggaatataaaccagagta 20066  T

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Target: scaffold0031 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 29932 - 30054
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| |||||| || ||| |||||||||||| ||||||  |||| ||||||| ||||||||| | || ||||||||    
T  29932 cgaataatacatttattcaagaaatagatgctacgtcatcatacaaaattcaaaa-ccaataagcatgcatataaatctcaacagtcgtagaggaatata 30030  T
Q  110 aactagagtaatcaacatatacat 133  Q
    ||| | ||||||| | ||||||||    
T  30031 aaccacagtaatccaaatatacat 30054  T

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Target: scaffold0031; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 68215 - 68312
Alignment:
Q  21 atttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaactagagt 118  Q
    |||||||||||||||||| |||||| || ||| |||||||||||| ||||||  || | |||||||| |||||||| |||||||||||||||| |||||    
T  68215 atttattcaagaaatagatgctacgtcatcatacaaaattcaaaa-ccaatatgcaagcatataaacttcaacagtcgcagcggaatataaaccagagt 68312  T

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Target: scaffold0002 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 391376 - 391325
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaa 62  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  391376 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattcaa 391325  T

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Target: scaffold0175 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 13106 - 13057
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattc 60  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  13106 cgaataatacatttattcaagaaatagaggctacgccacattcaaaattc 13057  T

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Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Original strand, 12835 - 12952
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaa----tagacatgtatataaacctcaacagttgcagcggaat 106  Q
    |||| |||| |||||||||||||||||||  |||| |  ||||||||||||||||  ||    ||||||||||| ||||||||||||||| |||||||||    
T  12835 cgaataatacatttattcaagaaatagagattacgtcttattcaaaattcaaaaaaaaaacgatagacatgtatgtaaacctcaacagttacagcggaat 12934  T
Q  107 ataaactagagtaatcaa 124  Q
    | |||  ||||| |||||    
T  12935 acaaatcagagtgatcaa 12952  T

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Target: scaffold0155 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 25529 - 25416
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataa 110  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||| ||||||| ||||| |||||| |||  |||||||||| |||||||||| ||    
T  25529 cgaataatacatttattcaagaaatagagattacgtcttattcaaaatttaaaaaccgatagatatgtatttaattctcaacagttacagcggaatacaa 25430  T
Q  111 actagagtaatcaa 124  Q
    |  ||||| |||||    
T  25429 atcagagtgatcaa 25416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 3690 - 3790
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatata 109  Q
    |||| |||| |||||||||||||||||| | |||| || ||| |||||||||||| |  ||| ||||||||||| || |||||||| |||||||||||||    
T  3690 cgaataatacatttattcaagaaatagatgttacgtcatcatacaaaattcaaaacc--ataaacatgtatatagacttcaacagtcgcagcggaatata 3787  T
Q  110 aac 112  Q
    |||    
T  3788 aac 3790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 15650 - 15548
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaa--aaaccaatagacatgtatataaacctcaacagttgcagcggaatat 108  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||  ||  ||| | |||||||||||| ||||||||||||||| |||||||||||    
T  15650 cgaataatacatttattcaagaaatagagattacgtcttattcaaaataaaataaaaacgatagacatgtatgtaaacctcaacagttacagcggaatat 15551  T
Q  109 aaa 111  Q
    |||    
T  15550 aaa 15548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 25044 - 24946
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaa--aaaccaatagacatgtatataaacctcaacagttgcagcggaata 107  Q
    |||| |||| |||||||||||||||||||  |||| |  |||||||||  ||  ||| | |||||||||||| ||||||||||||||| ||||||||||    
T  25044 cgaataatacatttattcaagaaatagagattacgtcttattcaaaataaaataaaaacgatagacatgtatgtaaacctcaacagttacagcggaata 24946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 4)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 8878 - 8932
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  8878 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaa 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 17327 - 17381
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaa 64  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  17327 cgaataatacatttattcaagaaatagaggctacgccatcattcaaaattcaaaa 17381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 8964 - 9011
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatg 134  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||    
T  8964 ctcaacagtcgcagcggaatataaaccagagtaatccaaatatacatg 9011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 17413 - 17460
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatg 134  Q
    ||||||||| |||||||||||||||| ||||||||| | |||||||||    
T  17413 ctcaacagtcgcagcggaatataaaccagagtaatccaaatatacatg 17460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 12094 - 12169
Alignment:
Q  11 cgaagaatatatttattcaagaaatagaggctacgccacattcaaaattcaaaaaccaatagacatgtatataaac 86  Q
    |||| |||| ||||||||||||||||| |  |||| |  |||||||||||||||||| |||||||||||| |||||    
T  12094 cgaataatacatttattcaagaaatagtgattacgtcttattcaaaattcaaaaaccgatagacatgtatgtaaac 12169  T

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Target: scaffold0247 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 16824 - 16699
Alignment:
Q  16 aatatatttattcaagaaatagaggctacgcca-cattcaaaattcaaaaaccaatagacatgtatataaacctcaacagttgcagcggaatataaacta 114  Q
    ||||| ||||||||||||||||| |||||| ||  |||||||||||||||  ||| |  |||| ||||||| ||||| ||| ||| ||| |||||||| |    
T  16824 aatatgtttattcaagaaatagatgctacgtcattattcaaaattcaaaactcaacatgcatgcatataaatctcaatagtcgcatcgg-atataaacca 16726  T
Q  115 gagtaatcaacatatacatgttatgaa 141  Q
    ||||| || | |||||||||| |||||    
T  16725 gagtactccaaatatacatgtcatgaa 16699  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 55866 - 55920
Alignment:
Q  87 ctcaacagttgcagcggaatataaactagagtaatcaacatatacatgttatgaa 141  Q
    ||||||||| |||||||||||||||| |||||| || | |||||||||| |||||    
T  55866 ctcaacagtcgcagcggaatataaaccagagtactcgaaatatacatgtcatgaa 55920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 8058 - 8102
Alignment:
Q  73 acatgtatataaacctcaacagttgcagcggaatataaactagag 117  Q
    |||||||||||||| |||||||| ||| |||||||||||| ||||    
T  8058 acatgtatataaacttcaacagtcgcaacggaatataaaccagag 8102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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