View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13945_high_21 (Length: 203)
Name: NF13945_high_21
Description: NF13945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13945_high_21 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 92; Significance: 7e-45; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 19812176 - 19812013
Alignment:
| Q |
21 |
aaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctcac |
120 |
Q |
| |
|
|||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||||||| || || ||||||| |
|
|
| T |
19812176 |
aaaataggatcaccaatgatagggtaaccccccaaaaccataatatcctccaaagtgatagttgcttcaccaaatggaaaaacaaaggtgttagtctcac |
19812077 |
T |
 |
| Q |
121 |
aacaccatttctcaacaaccccatatagcaagttttgatctttgagtatgttgcacttggtact |
184 |
Q |
| |
|
||||||||||||||||||||||| | ||||| ||| ||| ||||||||||| ||||||||||| |
|
|
| T |
19812076 |
aacaccatttctcaacaaccccaaagagcaattttagatttttgagtatgtgacacttggtact |
19812013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 19955973 - 19955836
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||| | ||| ||||||||||||||||| |
|
|
| T |
19955973 |
tgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaaatgtatttgtctc |
19955874 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagtttt |
156 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
19955873 |
acaacaccatttctcaacaactccaaatagcaagtttt |
19955836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 19989421 - 19989276
Alignment:
| Q |
18 |
atgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtct |
117 |
Q |
| |
|
||||||||||||| ||||| | |||||||||||| ||||||||| |||| ||||||||||| ||||| |||||||| | |||||||||||| ||||||| |
|
|
| T |
19989421 |
atgaaaacaggatcaccaagaatagggtaaccccctaaaaccataacatcttccaaagtgatagttgcctcaccaaatggaaaaacaaatgtgtttgtct |
19989322 |
T |
 |
| Q |
118 |
cacaacaccatttctcaacaaccccatatagcaagttttgatcttt |
163 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
19989321 |
cacaacaccatttctcaacaaccccaaatagcaagttatgatcttt |
19989276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 19818457 - 19818315
Alignment:
| Q |
17 |
gatgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtc |
116 |
Q |
| |
|
|||||||||||||| |||||||| ||| |||||||||||||| || |||||||||||||||| ||||| |||||||| | ||||||||| || || ||| |
|
|
| T |
19818457 |
gatgaaaacaggatcaccaatgataggataaccccccaaaactatgacatcctccaaagtgatagttgcctcaccaaatggaaaaacaaaggtgttagtc |
19818358 |
T |
 |
| Q |
117 |
tcacaacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
19818357 |
tcacaacaccatttctcaacaaccccaaatagcaagttttgat |
19818315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 19853410 - 19853266
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||| | || ||||||||||| ||||| |
|
|
| T |
19853410 |
tgaaaataggatcaccaatgatagggtaaccccccaaaaccataacatcctccaaagttattgttgcttcaccaaatgggaacacaaatgtattggtctc |
19853311 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagttttgatcttt |
163 |
Q |
| |
|
| |||||||||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
19853310 |
agaacaccatttgtcaacaaccccacataacaagttttgatcttt |
19853266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 20016412 - 20016559
Alignment:
| Q |
12 |
agtgagatgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtat |
111 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| || |||||| |||| | ||| |||||||||| |
|
|
| T |
20016412 |
agtgagatgaaaacaggatcgccaatgacagggtaaccacccaaaaccataatatcctccaaagtgattgtagcttcagcaaatggaaacacaaatgtat |
20016511 |
T |
 |
| Q |
112 |
ttgtctcacaacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
|||||| | ||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
20016512 |
ttgtcttagaacaccatttctccgcaacctcatatagcaagttttgat |
20016559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 19951023 - 19950882
Alignment:
| Q |
18 |
atgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtct |
117 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||| | ||| ||||||||||| |||| |
|
|
| T |
19951023 |
atgaaaacaggatcaccaagaacagggtaaccccccaaaaccataacatcctccaaagtgatagttgcctcaccaaatggaaacacaaatgtattggtct |
19950924 |
T |
 |
| Q |
118 |
cacaacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
|| |||||||||||||||||||||| | |||||||| |||| |
|
|
| T |
19950923 |
cagtacaccatttctcaacaaccccaaaaagcaagttatgat |
19950882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 26646915 - 26646774
Alignment:
| Q |
12 |
agtgagatgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtat |
111 |
Q |
| |
|
||||| ||||||||||||| ||||| | ||| ||||||||||||||||| |||||||||||| || ||||||||||||||||||| ||||| |||| |
|
|
| T |
26646915 |
agtgaaatgaaaacaggatccccaataataggataaccccccaaaaccatgatatcctccaaagtaatagttgcttcaccaaaggcaatcacaaaggtat |
26646816 |
T |
 |
| Q |
112 |
ttgtctcacaacaccatttctcaacaaccccatatagcaagt |
153 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26646815 |
ttgtctcacaacaccatttctcaactaccccatatagcaagt |
26646774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 19838282 - 19838145
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||||||| | ||| ||||||||||| ||||| |
|
|
| T |
19838282 |
tgaaaacagaatcaccaatgacagggtaaccccccaaaaccatgacatcttccaaagtgattgttgcctcaccaaatggaaacacaaatgtattggtctc |
19838183 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagtttt |
156 |
Q |
| |
|
||| ||||||||||||||||| || ||| |||||||| |
|
|
| T |
19838182 |
acagcaccatttctcaacaacttcaaataacaagtttt |
19838145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 20036826 - 20036970
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||| || | |||||| |||||||||| ||| |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
20036826 |
tgaaaacaggatcaccaagaacaggataacctcctagaaccatgatatcctccaaaatgactgttgcttcaccaaaggaaaacacaaatgtatttgtctt |
20036925 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagttttgatcttt |
163 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20036926 |
ggaacaccatttctccacaaccccatatagcaagttttgatcttt |
20036970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 19857969 - 19857824
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatt-tgtct |
117 |
Q |
| |
|
|||||||||||| ||||| || || ||||||||||||||||| | ||||||| | ||| || |||||||||||||||| ||| || |||||||| |||| |
|
|
| T |
19857969 |
tgaaaacaggatcaccaaagagagagtaaccccccaaaaccacaacatcctctatagtaattgttgcttcaccaaagggaaacacgaatgtattgggtct |
19857870 |
T |
 |
| Q |
118 |
cacaacaccatttctcaacaaccccatatagcaagttttgatcttt |
163 |
Q |
| |
|
|| |||||||||| |||||||||||||| | ||||||| ||||||| |
|
|
| T |
19857869 |
cagaacaccatttgtcaacaaccccataaaccaagtttggatcttt |
19857824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 19848885 - 19848745
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
|||||||||||| ||||| ||||| |||||||| | |||||| ||||||||||||||| |||||||||||||||| ||| ||||| |||||||| | |
|
|
| T |
19848885 |
tgaaaacaggatcaccaagaacaggataaccccctagaaccatgatatcctccaaagtgattgttgcttcaccaaaggaaaacacaaaggtatttgtatt |
19848786 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
19848785 |
aggacaccatttctcaactaccccaactagcaagttttgat |
19848745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 24840195 - 24840318
Alignment:
| Q |
20 |
gaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctca |
119 |
Q |
| |
|
|||||||||| |||||| || || ||| ||||||||||| || |||||||||||||||| |||||||||||||| ||| || || || ||||| ||| |
|
|
| T |
24840195 |
gaaaacaggaagaccaaagagagagtagccccccaaaacaatgacatcctccaaagtgattgttgcttcaccaaatagaaacacgaaggtgtttgtttca |
24840294 |
T |
 |
| Q |
120 |
caacaccatttctcaacaacccca |
143 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
24840295 |
caacaccatttctcaacaacccca |
24840318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 19943615 - 19943493
Alignment:
| Q |
21 |
aaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctcac |
120 |
Q |
| |
|
|||||||||||||||| || || ||| ||||||||||| || |||| ||||||||||| |||||||||||||| ||| ||||| || ||||| |||| |
|
|
| T |
19943615 |
aaaacaggatgaccaaagagagagtatccccccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcac |
19943516 |
T |
 |
| Q |
121 |
aacaccatttctcaacaacccca |
143 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
19943515 |
aacaccatttctcaacaatccca |
19943493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 20046021 - 20045881
Alignment:
| Q |
19 |
tgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctc |
118 |
Q |
| |
|
|||||||| ||| ||||||| ||||||||| |||||||| || ||||||||| || || |||| |||||||||| ||||| |||||||||||| || |
|
|
| T |
20046021 |
tgaaaacatgatcgccaatgatagggtaacctcccaaaacaatgatatcctccaaggttattgttgtctcaccaaagggaaaaataaatgtatttgtatc |
20045922 |
T |
 |
| Q |
119 |
acaacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
||||||||||||||| |||||||| | ||| ||||| |||| |
|
|
| T |
20045921 |
acaacaccatttctccacaaccccttgtagtaagttctgat |
20045881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 26651929 - 26651791
Alignment:
| Q |
21 |
aaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctcac |
120 |
Q |
| |
|
|||||||||| ||||| || || ||| ||||||||||| || |||||||||||||||| ||||| |||||||| | ||||||||| ||||||||||| |
|
|
| T |
26651929 |
aaaacaggataaccaaagagagagtagccccccaaaacaatgacatcctccaaagtgattgttgcctcaccaaaaggaaaaacaaagcaatttgtctcac |
26651830 |
T |
 |
| Q |
121 |
aacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
||||||||||||| || |||||| | ||||| ||||| |
|
|
| T |
26651829 |
tacaccatttctcagaaatcccataaaccaagtcttgat |
26651791 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 20005225 - 20005329
Alignment:
| Q |
39 |
acagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctcacaacaccatttctcaacaa |
138 |
Q |
| |
|
||||| |||||||||||||| || |||| ||||||||||| |||||||||||||| ||| ||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
20005225 |
acaggataaccccccaaaacaatgacatcttccaaagtgattgttgcttcaccaaatagaaacacaaaggtgtttgtttcacaacaccatttctcaacaa |
20005324 |
T |
 |
| Q |
139 |
cccca |
143 |
Q |
| |
|
|||| |
|
|
| T |
20005325 |
tccca |
20005329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 9814936 - 9814770
Alignment:
| Q |
18 |
atgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtct |
117 |
Q |
| |
|
||||||| ||||| ||| |||||||| |||||||||||||||||| ||||||||||| | || || || |||||||| | ||| ||||||||||| |||| |
|
|
| T |
9814936 |
atgaaaataggatcaccgatgacaggataaccccccaaaaccataacatcctccaaactaatcgtcgcctcaccaaacggaaacacaaatgtattcgtct |
9814837 |
T |
 |
| Q |
118 |
cacaacaccatttctcaacaaccccatatagcaagttttgatctttgagtatgttgcacttggtact |
184 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| |
|
|
| T |
9814836 |
tacaacaccatttctcaacaaccccatatagcaagttttgatctttcattatgcggcacttggtact |
9814770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 26355148 - 26355312
Alignment:
| Q |
20 |
gaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctca |
119 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||| | ||||||| ||||||||||| | || || |||||||| | ||| ||||||||||| |||||| |
|
|
| T |
26355148 |
gaaaataggatcaccaatgacagggtaacccccaagaaccataacatcctccaaacctaccgtcgcctcaccaaacggaaacacaaatgtattagtctca |
26355247 |
T |
 |
| Q |
120 |
caacaccatttctcaacaaccccatatagcaagttttgatctttgagtatgttgcacttggtact |
184 |
Q |
| |
|
|||||||||||||| |||||||| || ||||||||||||| ||| |||||| ||| |||||||| |
|
|
| T |
26355248 |
caacaccatttctccacaaccccgtaaagcaagttttgatttttcagtatgcggcatttggtact |
26355312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 49 - 184
Target Start/End: Original strand, 38435381 - 38435516
Alignment:
| Q |
49 |
cccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctcacaacaccatttctcaacaaccccatatag |
148 |
Q |
| |
|
||||||||||||| ||| || |||||||| |||||| |||||| | ||| ||||||||||| |||| ||||||||||||||||||||||| | ||| |
|
|
| T |
38435381 |
cccccaaaaccatgatatcttcaaaagtgattgttgctacaccaagtggaaacacaaatgtattggtcttacaacaccatttctcaacaaccctaaataa |
38435480 |
T |
 |
| Q |
149 |
caagttttgatctttgagtatgttgcacttggtact |
184 |
Q |
| |
|
|||||| |||| ||| |||||| ||| || ||||| |
|
|
| T |
38435481 |
caagttatgatttttatgtatgtagcatttagtact |
38435516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 1717111 - 1716972
Alignment:
| Q |
20 |
gaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtatttgtctca |
119 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||| || ||||||||||| | ||| |||||||||||||||||| |
|
|
| T |
1717111 |
gaaaacaggatcaccaatgacagggtaatcccctaaaaccataatatcctccaaagtgattgtggcttcaccaaaaggaaacacaaatgtatttgtctca |
1717012 |
T |
 |
| Q |
120 |
caacaccatttctcaacaaccccatatagcaagttttgat |
159 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||||||| |
|
|
| T |
1717011 |
caacaccatttttcaacaatcccatataacaagttttgat |
1716972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 22652301 - 22652452
Alignment:
| Q |
12 |
agtgagatgaaaacaggatgaccaatgacagggtaaccccccaaaaccatagcatcctccaaagtgatggttgcttcaccaaaggcaaaaacaaatgtat |
111 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||| | |||| |||| |||| || || ||||| ||||| |||||||| | ||| ||||||| | |
|
|
| T |
22652301 |
agtgagatgaaaacaggatcaccaagaacagggtaaccctctaaaatcataacatcttctaaggtgatagttgcctcaccaaatggaaacacaaatgagt |
22652400 |
T |
 |
| Q |
112 |
ttgtctcacaacaccatttctcaacaaccccatatagcaagttttgatcttt |
163 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
22652401 |
ttgtctcacagcaccatttctcaacaaccccaaatagcaagttatgatcttt |
22652452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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