View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13946_low_7 (Length: 493)

Name: NF13946_low_7
Description: NF13946
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13946_low_7
NF13946_low_7
[»] chr8 (27 HSPs)
chr8 (17-293)||(3136220-3136495)
chr8 (336-482)||(3137352-3137501)
chr8 (352-480)||(35901430-35901560)
chr8 (352-462)||(11150891-11151001)
chr8 (354-464)||(43917557-43917668)
chr8 (378-462)||(10029157-10029241)
chr8 (353-480)||(20542356-20542486)
chr8 (354-464)||(17720210-17720322)
chr8 (386-480)||(44648952-44649048)
chr8 (354-453)||(23425310-23425410)
chr8 (356-453)||(547034-547132)
chr8 (355-462)||(27506980-27507088)
chr8 (354-463)||(18200714-18200824)
chr8 (344-446)||(6270199-6270303)
chr8 (354-462)||(31330970-31331080)
chr8 (359-427)||(23725694-23725763)
chr8 (383-480)||(1342322-1342420)
chr8 (383-462)||(600372-600451)
chr8 (378-429)||(27162830-27162881)
chr8 (351-480)||(34678221-34678352)
chr8 (354-463)||(18647494-18647603)
chr8 (354-480)||(41726866-41726995)
chr8 (374-462)||(40489841-40489929)
chr8 (417-480)||(3347525-3347590)
chr8 (351-463)||(33621339-33621446)
chr8 (381-418)||(35864631-35864668)
chr8 (385-426)||(42361584-42361625)
[»] chr7 (26 HSPs)
chr7 (353-477)||(16979911-16980038)
chr7 (352-464)||(37928268-37928381)
chr7 (352-480)||(19676963-19677094)
chr7 (353-463)||(34993161-34993272)
chr7 (380-480)||(23142667-23142769)
chr7 (354-457)||(30027934-30028038)
chr7 (381-462)||(16685729-16685812)
chr7 (381-462)||(17659965-17660048)
chr7 (377-463)||(41760372-41760458)
chr7 (396-453)||(8746149-8746206)
chr7 (386-480)||(43118809-43118905)
chr7 (383-462)||(31850782-31850862)
chr7 (396-463)||(8896631-8896698)
chr7 (383-462)||(25530579-25530658)
chr7 (375-457)||(41064344-41064426)
chr7 (381-450)||(11736212-11736281)
chr7 (380-452)||(7833788-7833860)
chr7 (381-446)||(3624274-3624339)
chr7 (383-452)||(11740405-11740474)
chr7 (354-463)||(12810180-12810289)
chr7 (355-462)||(18221020-18221129)
chr7 (416-463)||(10068130-10068177)
chr7 (412-463)||(23080658-23080709)
chr7 (384-458)||(26241643-26241717)
chr7 (383-453)||(1521247-1521314)
chr7 (400-456)||(23317838-23317894)
[»] chr4 (28 HSPs)
chr4 (352-462)||(20775040-20775151)
chr4 (351-478)||(27284039-27284169)
chr4 (354-480)||(12094928-12095057)
chr4 (372-449)||(52837314-52837391)
chr4 (355-464)||(19480508-19480618)
chr4 (380-457)||(2824855-2824932)
chr4 (351-480)||(48419040-48419172)
chr4 (348-480)||(13967808-13967944)
chr4 (352-464)||(39810735-39810847)
chr4 (353-462)||(7437863-7437973)
chr4 (383-464)||(55126810-55126892)
chr4 (381-462)||(27133547-27133628)
chr4 (373-446)||(46399828-46399901)
chr4 (397-453)||(2565454-2565510)
chr4 (378-462)||(16341136-16341220)
chr4 (375-463)||(22019595-22019683)
chr4 (402-479)||(31089800-31089878)
chr4 (381-480)||(12076442-12076543)
chr4 (354-448)||(55090752-55090845)
chr4 (413-462)||(31861462-31861511)
chr4 (352-419)||(36506747-36506815)
chr4 (413-451)||(29171142-29171180)
chr4 (413-462)||(3708722-3708771)
chr4 (373-410)||(9395157-9395194)
chr4 (419-464)||(44190255-44190300)
chr4 (416-457)||(44639901-44639942)
chr4 (412-464)||(42595216-42595268)
chr4 (356-447)||(48202457-48202549)
[»] chr3 (25 HSPs)
chr3 (354-480)||(48338783-48338912)
chr3 (381-480)||(4020096-4020197)
chr3 (381-480)||(28709580-28709681)
chr3 (374-480)||(635719-635827)
chr3 (383-480)||(44698218-44698317)
chr3 (381-463)||(29032410-29032492)
chr3 (354-462)||(31494039-31494148)
chr3 (386-480)||(50958863-50958959)
chr3 (354-464)||(4128725-4128836)
chr3 (373-480)||(11676750-11676859)
chr3 (353-457)||(42437755-42437858)
chr3 (383-480)||(49261780-49261879)
chr3 (385-464)||(54801362-54801441)
chr3 (375-464)||(25319455-25319544)
chr3 (381-480)||(6785808-6785910)
chr3 (356-463)||(8326110-8326217)
chr3 (383-480)||(55446733-55446831)
chr3 (372-435)||(49543194-49543257)
chr3 (416-450)||(24344864-24344898)
chr3 (380-462)||(34145939-34146020)
chr3 (382-462)||(26613099-26613180)
chr3 (354-430)||(46647454-46647530)
chr3 (386-464)||(12109653-12109731)
chr3 (380-464)||(40460224-40460308)
chr3 (381-446)||(53818824-53818889)
[»] chr5 (18 HSPs)
chr5 (341-480)||(22293941-22294083)
chr5 (358-464)||(30840630-30840736)
chr5 (396-480)||(11815924-11816010)
chr5 (381-462)||(1056807-1056888)
chr5 (375-480)||(27544581-27544688)
chr5 (379-480)||(36482048-36482150)
chr5 (383-480)||(30293837-30293936)
chr5 (380-446)||(7319255-7319321)
chr5 (404-462)||(14044714-14044772)
chr5 (354-462)||(27366005-27366114)
chr5 (381-464)||(28511181-28511265)
chr5 (353-431)||(41175392-41175471)
chr5 (416-462)||(2089150-2089196)
chr5 (351-428)||(5471238-5471316)
chr5 (380-452)||(42491636-42491709)
chr5 (354-408)||(32506439-32506493)
chr5 (354-448)||(8435027-8435122)
chr5 (380-480)||(41645031-41645131)
[»] chr1 (24 HSPs)
chr1 (353-482)||(8001759-8001891)
chr1 (352-480)||(13969113-13969244)
chr1 (354-480)||(32187024-32187152)
chr1 (354-463)||(33148164-33148273)
chr1 (347-462)||(30941503-30941619)
chr1 (385-464)||(46295903-46295982)
chr1 (380-480)||(10226476-10226578)
chr1 (383-464)||(17169302-17169383)
chr1 (383-477)||(26829492-26829588)
chr1 (357-464)||(27688451-27688560)
chr1 (355-460)||(49731198-49731304)
chr1 (386-450)||(34347556-34347620)
chr1 (380-463)||(38597477-38597560)
chr1 (375-463)||(50015808-50015896)
chr1 (378-437)||(3529106-3529165)
chr1 (396-463)||(11449073-11449140)
chr1 (396-463)||(39238844-39238911)
chr1 (383-457)||(52429628-52429702)
chr1 (354-452)||(26890112-26890210)
chr1 (373-410)||(12527581-12527618)
chr1 (399-457)||(14884885-14884945)
chr1 (354-410)||(17644839-17644896)
chr1 (381-462)||(37597166-37597247)
chr1 (380-464)||(48502563-48502647)
[»] chr6 (17 HSPs)
chr6 (350-449)||(27082277-27082377)
chr6 (345-480)||(5611143-5611280)
chr6 (356-480)||(32134018-32134145)
chr6 (378-451)||(10008188-10008261)
chr6 (381-464)||(18493241-18493324)
chr6 (356-457)||(8636783-8636885)
chr6 (354-435)||(31223165-31223248)
chr6 (354-464)||(227303-227416)
chr6 (381-462)||(2470349-2470430)
chr6 (380-464)||(2911499-2911583)
chr6 (354-464)||(30929465-30929577)
chr6 (381-452)||(19418593-19418664)
chr6 (375-463)||(17345875-17345963)
chr6 (385-445)||(19659665-19659725)
chr6 (396-464)||(33121343-33121411)
chr6 (380-462)||(17835010-17835092)
chr6 (380-448)||(6770830-6770899)
[»] chr2 (33 HSPs)
chr2 (372-464)||(13738427-13738519)
chr2 (380-480)||(23453341-23453444)
chr2 (383-457)||(41436325-41436399)
chr2 (385-478)||(40346710-40346805)
chr2 (354-446)||(42552012-42552104)
chr2 (379-479)||(4978767-4978869)
chr2 (379-479)||(4996675-4996777)
chr2 (353-462)||(8580481-8580591)
chr2 (354-463)||(18717820-18717930)
chr2 (354-480)||(40574157-40574286)
chr2 (358-430)||(42251581-42251654)
chr2 (352-480)||(1004789-1004919)
chr2 (354-457)||(43080345-43080448)
chr2 (357-464)||(5525317-5525424)
chr2 (347-480)||(4557534-4557671)
chr2 (355-464)||(6315858-6315968)
chr2 (344-462)||(3689653-3689770)
chr2 (382-446)||(28331304-28331368)
chr2 (358-481)||(14952998-14953124)
chr2 (380-463)||(43131792-43131875)
chr2 (381-464)||(43681303-43681386)
chr2 (378-463)||(38024214-38024298)
chr2 (386-450)||(6462637-6462701)
chr2 (380-477)||(9021470-9021569)
chr2 (383-480)||(13717178-13717276)
chr2 (378-462)||(33609208-33609292)
chr2 (383-462)||(27896463-27896542)
chr2 (354-480)||(1870508-1870636)
chr2 (396-462)||(7932925-7932991)
chr2 (386-480)||(32909419-32909518)
chr2 (381-422)||(36087364-36087405)
chr2 (386-462)||(17641177-17641253)
chr2 (372-463)||(38193712-38193804)
[»] scaffold0039 (1 HSPs)
scaffold0039 (380-464)||(30019-30103)
[»] scaffold0204 (1 HSPs)
scaffold0204 (381-480)||(15380-15481)
[»] scaffold0002 (1 HSPs)
scaffold0002 (373-480)||(120659-120768)
[»] scaffold0299 (1 HSPs)
scaffold0299 (354-448)||(18064-18160)
[»] scaffold0079 (1 HSPs)
scaffold0079 (378-462)||(51641-51725)
[»] scaffold0036 (1 HSPs)
scaffold0036 (416-464)||(36565-36613)
[»] scaffold0329 (1 HSPs)
scaffold0329 (422-464)||(7398-7440)


Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 17 - 293
Target Start/End: Original strand, 3136220 - 3136495
Alignment:
Q  17 aaaaaagactgtattccattactcagtttacacaaaaaagaacaagtgaataatcacattaacattggagttaaactcactagcaattagtaagaccatc 116  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3136220 aaaaaagattgtattccattactcagtttacacaaaaaagaacaagtgaataatcacattaacattggagttaaactcactagcaattagtaagaccatc 3136319  T
Q  117 ccctgaatgataaattgataattctagatcacaatgattaaaggaatgtggaagattaaggaaaaactatctactagtattatctacgt-----agtagt 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      |||||||||| |     ||||||    
T  3136320 ccctgaatgataaattgataattctagatcacaatgattaaaggaatgtggaaaattaaggaaaaactatc------tattatctacatagtccagtagt 3136413  T
Q  212 attagacttagtttagttttgtaatcttaagatataaagttcaaaatctctcaaagacgttctaaaatagtcattagtgtca 293  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3136414 attagacttagtttagttttgtaaccttaagatataaagttcaaaatctctcaaagacgttgtaaaatagtcattagtgtca 3136495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 336 - 482
Target Start/End: Original strand, 3137352 - 3137501
Alignment:
Q  336 aaatctctattatttaatggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataatt 434  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  3137352 aaatctctattatttaatggagaatgctaaccagtgccctaagaacattggttaggcatccaaaacaaataagtttatatgaaaaagttgtgtaataatt 3137451  T
Q  435 atttgatcaaaagtaacatcttacattttc--gacaaaatttctatttct 482  Q
    | ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  3137452 acttgatcaaaagtaacatcttacattttcaagacaaaatttctatttct 3137501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 352 - 480
Target Start/End: Complemental strand, 35901560 - 35901430
Alignment:
Q  352 atggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||||| ||||| ||||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| || |||||||||    
T  35901560 atggagaatgttaaccggtgccaaagggtattggttaagcatccaaaacaagtaagtttttatgaaaaagttgtgcaatcattatttaattaaaagtaac 35901461  T
Q  452 atcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||||   |||||||||||||||    
T  35901460 atcttacattttcaaaacaaaatttctattt 35901430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 11150891 - 11151001
Alignment:
Q  352 atggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||||| |||| ||||| |||||||||||||| ||||| |||||||||| ||  ||||| ||||||||| |||||||||||||||||||    
T  11150891 atggagaatgctaaccactgccctaagggcattggttaagcattcaaaataagtaagtttttaaaaaaaa-ttgtgtaatcattatttgatcaaaagtaa 11150989  T
Q  451 catcttacattt 462  Q
    ||||||| ||||    
T  11150990 catcttatattt 11151001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 354 - 464
Target Start/End: Original strand, 43917557 - 43917668
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||| ||||| ||||||||| |||||||||| |||||||||     
T  43917557 ggagaatgctaaccagtgcattaaggatattggttaagcatccaaaacaagtaaatttttataaaaaaattgtgtaattattatttgattaaaagtaacg 43917656  T
Q  453 tcttacattttc 464  Q
     |||| ||||||    
T  43917657 ccttatattttc 43917668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 10029157 - 10029241
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||| |||| |||| ||||||||||||||||||||| ||||    
T  10029157 gacattggttaagcatccaaatcaagtaaatttttatgaaaaagttgtataatcattacttgatcaaaagtaacatcttatattt 10029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 480
Target Start/End: Original strand, 20542356 - 20542486
Alignment:
Q  353 tggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||||||||| |||||  |||| ||||||||||||||||||||| ||||||||| || ||||||  |||||||| |||| || ||||||||||||    
T  20542356 tggagaatgctaacccgtgccccaagggcattggttaagcatccaaaacgagtaagtttttaagaaaaaagtgtgtaatcattacttaatcaaaagtaac 20542455  T
Q  452 atcttacattttc--gacaaaatttctattt 480  Q
    |||||| |||| |  ||| ||||||||||||    
T  20542456 atcttatatttccaagacgaaatttctattt 20542486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 464
Target Start/End: Complemental strand, 17720322 - 17720210
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggtta--agcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||| ||||||||||| |||| |||||||||  ||||||||||||||  ||||||  |||||||||||||||||| ||||  ||||||||| ||||    
T  17720322 ggagaatgttaaccagtgcccaagggcattggttataagcatccaaaacaaacaagttttcatgaaaaagttgtgtaatcattacatgatcaaaaataac 17720223  T
Q  452 atcttacattttc 464  Q
    |||||| ||||||    
T  17720222 atcttatattttc 17720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 44649048 - 44648952
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    ||||||||||||||||| |||||||  |||||||||||||||||| |||| || |||||||||||||| ||| ||||||  ||||||||||||||||    
T  44649048 ttaagcatccaaaacaaataagttttcatgaaaaagttgtgtaatcattactttatcaaaagtaacattttatattttcaagacaaaatttctattt 44648952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 453
Target Start/End: Complemental strand, 23425410 - 23425310
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||| ||||||||||| |||  |||||| ||||| |||||||||||||| ||||  |||||||||||||||||| ||||||||||||||| |||||    
T  23425410 ggagaatgttaaccagtgccataataacattgattaagtatccaaaacaagtacgttttaatgaaaaagttgtgtaatcattatttgatcaaaaataaca 23425311  T
Q  453 t 453  Q
    |    
T  23425310 t 23425310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 356 - 453
Target Start/End: Original strand, 547034 - 547132
Alignment:
Q  356 agaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    ||||||||||| |||||| ||| ||||||| ||||| ||| |||||||||| ||||  |||||||||||||||||| ||||||||||||||| ||||||    
T  547034 agaatgctaacgagtgccataatgacattgattaagtatctaaaacaagtacgttttaatgaaaaagttgtgtaattattatttgatcaaaaataacat 547132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 355 - 462
Target Start/End: Complemental strand, 27507088 - 27506980
Alignment:
Q  355 gagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    ||||||| ||||| |||||  ||||||| |||||| ||||| ||||||||||| |||  |||||||||||||||||| ||||||| ||||||||||| ||    
T  27507088 gagaatgataacctgtgccccaaggacaatggttacgcatctaaaacaagtaaattttcatgaaaaagttgtgtaattattattttatcaaaagtaatat 27506989  T
Q  454 cttacattt 462  Q
    |||| ||||    
T  27506988 cttatattt 27506980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 18200824 - 18200714
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||| |||| ||| || || ||| ||||||||||||||| ||||||| || ||||||||| ||||||||| |||| || |||||||||||||    
T  18200824 ggagaatgctaatcagttccttaaagatatttgttaagcatccaaaataagtaagcttttatgaaaaaattgtgtaatcattacttaatcaaaagtaaca 18200725  T
Q  453 tcttacatttt 463  Q
    | ||| |||||    
T  18200724 tgttatatttt 18200714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 446
Target Start/End: Complemental strand, 6270303 - 6270199
Alignment:
Q  344 attatttaatggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaa-caagtaagtttatatgaaaaagttgtgtaataattatttgat 441  Q
    |||||||  |||||||||||||||||||  ||||||||| |||||||||||| |||| |||||||||||  || ||||||||||||||| |||| || ||    
T  6270303 attattttttggagaatgctaaccagtgtactaaggacaatggttaagcatcaaaaaacaagtaagttttcataaaaaagttgtgtaatcattactttat 6270204  T
Q  442 caaaa 446  Q
    |||||    
T  6270203 caaaa 6270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 354 - 462
Target Start/End: Original strand, 31330970 - 31331080
Alignment:
Q  354 ggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagt-ttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||| |||||||||  ||||||||||||||||||||||||||||||| || | || |   | ||||||||||||| | | ||||||||||||||||    
T  31330970 ggagaatgttaaccagtgttctaaggacattggttaagcatccaaaacaagcaaatgttcttaaagaaagttgtgtaatcactgtttgatcaaaagtaac 31331069  T
Q  452 atcttacattt 462  Q
    |||||| ||||    
T  31331070 atcttatattt 31331080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 23725763 - 23725694
Alignment:
Q  359 atgctaaccagtgccta-aggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgt 427  Q
    |||||||||||||||   ||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  23725763 atgctaaccagtgcccccagggcattggttaagcatccaaaacaagtaagttttcatgaaaaagttgtgt 23725694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 1342322 - 1342420
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||| |||| ||||||||||  || ||||||||||||||| ||| ||| |||||||||||||||||| |||| |  || |||||||||||||    
T  1342322 tggttaagcatctaaaataagtaagttttcataaaaaagttgtgtaatcattgttt-atcaaaagtaacatcttatatttccaagataaaatttctattt 1342420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 600372 - 600451
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||| |||| ||||||| |||||||  |||||||||||||| ||| |||| || |||||||||||||||||| ||||    
T  600372 tggttaaacatctaaaacaaataagttttcatgaaaaagttgtgcaatcattactttatcaaaagtaacatcttatattt 600451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 27162830 - 27162881
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaa 429  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  27162830 gacattggttaagcatccaaaacaagcaagtttttataaaaaagttgtgtaa 27162881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 351 - 480
Target Start/End: Complemental strand, 34678352 - 34678221
Alignment:
Q  351 aatggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagta 449  Q
    |||||||||||||||| | ||| | || | || ||||||||||| ||||||||| || |||  || ||||| || |||||| |||| |||||||||||||    
T  34678352 aatggagaatgctaactattgctccaaaggcaatggttaagcattcaaaacaagcaacttttaataaaaaa-ttatgtaattattacttgatcaaaagta 34678254  T
Q  450 acatcttacattttc--gacaaaatttctattt 480  Q
    |||| ||||||||||  |||||| |||||||||    
T  34678253 acattttacattttcaagacaaattttctattt 34678221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 18647603 - 18647494
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||| |||| | |||||  | |||||||||||  ||||||||||| |||  |||||||| ||||||||| || |||| ||||||| |||||    
T  18647603 ggagaatgctaactagtgtcgtaagggtaatggttaagcatttaaaacaagtaaatttccatgaaaaaattgtgtaatcatcattttatcaaaa-taaca 18647505  T
Q  453 tcttacatttt 463  Q
    ||||| |||||    
T  18647504 tcttatatttt 18647494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 480
Target Start/End: Original strand, 41726866 - 41726995
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||| |||| |||||| ||||| || |||||||||||| |||| |||||||||| |||||||||  | |||||| |||| || || |||| |||||    
T  41726866 ggagaatgataactagtgccctaagggcaatggttaagcatctaaaataagtaagtttttatgaaaaaactatgtaatcattactttataaaaaataaca 41726965  T
Q  453 tcttacattttc--gacaaaatttctattt 480  Q
    | ||| |||| |  |||||||||| |||||    
T  41726966 ttttatatttccaagacaaaatttttattt 41726995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 462
Target Start/End: Original strand, 40489841 - 40489929
Alignment:
Q  374 taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||| || |||||||  ||| ||||||| ||||||| |||||||||||| |||||| |||| || ||||| |||||||| ||| ||||    
T  40489841 taagggcaatggttaaatatctaaaacaaataagtttttatgaaaaagttatgtaatcattactttatcaatagtaacattttatattt 40489929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 3347590 - 3347525
Alignment:
Q  417 aaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||||| |||| || || ||||||||||||||| ||||||  |||||||||| |||||    
T  3347590 aaaagttgtgtaattattactttattaaaagtaacatcttatattttcaagacaaaatttttattt 3347525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 463
Target Start/End: Original strand, 33621339 - 33621446
Alignment:
Q  351 aatggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagta 449  Q
    ||||||||||||||| || ||| | |||| |||||||||| |||||||||||||||| ||| ||| |||      ||||||||||| |||||||||||||    
T  33621339 aatggagaatgctaatcaatgctccaagggcattggttaaacatccaaaacaagtaaattt-tataaaa-----ttgtaataattacttgatcaaaagta 33621432  T
Q  450 acatcttacatttt 463  Q
    | || ||| |||||    
T  33621433 aaattttatatttt 33621446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 418
Target Start/End: Original strand, 35864631 - 35864668
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaa 418  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  35864631 attggttaagcatctaaaacaagtaagtttttatgaaa 35864668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 426
Target Start/End: Complemental strand, 42361625 - 42361584
Alignment:
Q  385 gttaagcatccaaaacaagtaagtttatatgaaaaagttgtg 426  Q
    |||||| |||||||||||||||||||  ||||||||||||||    
T  42361625 gttaaggatccaaaacaagtaagttttcatgaaaaagttgtg 42361584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 9e-31; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 353 - 477
Target Start/End: Original strand, 16979911 - 16980038
Alignment:
Q  353 tggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||||||||  |||| |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| || |||| | |||||||||||||    
T  16979911 tggagaatgctaactggtgctctaagggcattggttaagcatccaaaacaagtaaatttttatgaaaaagttgtgtgattattactcgatcaaaagtaac 16980010  T
Q  452 atcttacattttc--gacaaaatttcta 477  Q
    |||||| ||||||  |||||||||||||    
T  16980011 atcttatattttcaagacaaaatttcta 16980038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 37928268 - 37928381
Alignment:
Q  352 atggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||| ||||||||| |||| || ||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||| || ||||||| |||    
T  37928268 atggaaaatgctaactagtgtctcaaggacattggttaaacatccaaaataagtaagtttttataaaaaagttgtgtaataattactttatcaaaaataa 37928367  T
Q  451 catcttacattttc 464  Q
    ||| ||| ||||||    
T  37928368 cattttatattttc 37928381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 480
Target Start/End: Original strand, 19676963 - 19677094
Alignment:
Q  352 atggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||| ||||||| ||||||   || ||||| |||||||| |||| || |||||||||||    
T  19676963 atggagaatgctaactagtgccccaagggcattggttaagcatcctaaacaagcaagttttggtgtaaaaggtgtgtaatcattacttaatcaaaagtaa 19677062  T
Q  451 catcttacattttc--gacaaaatttctattt 480  Q
    ||||||| ||||||  ||||||||||||||||    
T  19677063 catcttatattttcaagacaaaatttctattt 19677094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 34993272 - 34993161
Alignment:
Q  353 tggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||| ||||||||||| ||||  || || ||||||||| ||| |||||||||||  |||||||||||||||||| ||||||| ||||||||||||    
T  34993272 tggagaatgttaaccagtgccctaagagcaatgattaagcatctaaatcaagtaagttttcatgaaaaagttgtgtaattattattttatcaaaagtaac 34993173  T
Q  452 atcttacatttt 463  Q
    |||||| |||||    
T  34993172 atcttatatttt 34993161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 23142769 - 23142667
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaa-gttgtgtaataattatttgatcaaaagtaacatcttacattttc-gacaaaatttcta 477  Q
    |||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||| |||||||||| |||||||||| |||| |  ||||||||||||    
T  23142769 cattggttaaacatccaaaataagtaagtttttatgaaaaaagttgtgtaataattacttgatcaaaaataacatcttatatttccaaacaaaatttcta 23142670  T
Q  478 ttt 480  Q
    |||    
T  23142669 ttt 23142667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 457
Target Start/End: Original strand, 30027934 - 30028038
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||||||||| | |||||  | ||||||| |||||| |||||||||| ||  ||||||||||||||| || |||| || |||||||||||||    
T  30027934 ggagaatgctaaccagtgtcataagggtaatggttaaacatccataacaagtaagatttcatgaaaaagttgtgtgatcattactttatcaaaagtaaca 30028033  T
Q  453 tctta 457  Q
    |||||    
T  30028034 tctta 30028038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 16685729 - 16685812
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttata-tgaaaaagttgtgtaataattatttgatcaaa-agtaacatcttacattt 462  Q
    ||||||||||||||||||| |||||||||| || | ||||||||||||||| |||| ||||||||| |||||||||||| ||||    
T  16685729 attggttaagcatccaaaataagtaagtttttatttaaaaagttgtgtaatcattacttgatcaaagagtaacatcttatattt 16685812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 17659965 - 17660048
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttata-tgaaaaagttgtgtaataattatttgatcaaa-agtaacatcttacattt 462  Q
    ||||||||||||||||||| |||||||||| || | ||||||||||||||| |||| ||||||||| |||||||||||| ||||    
T  17659965 attggttaagcatccaaaataagtaagtttttatttaaaaagttgtgtaatcattacttgatcaaagagtaacatcttatattt 17660048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 41760458 - 41760372
Alignment:
Q  377 ggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||||||||||||||||||||||  | |||| || ||| |||||||||||||||||||| ||||| |||| ||| | ||||||||||    
T  41760458 ggacattggttaagcatccaaaaagaataagattttattaaaaagttgtgtaataattacttgataaaaaataaaaacttacatttt 41760372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 453
Target Start/End: Original strand, 8746149 - 8746206
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    |||| |||||||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  8746149 aaaataagtaagtttttatgaaaaagttgtataatcattatttgatcaaaagtaacat 8746206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 43118809 - 43118905
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||| ||||||||||||||||||||  |||||||| ||| ||||| | |||||||||||| ||||||||| | ||||||  |||||||||| |||||    
T  43118809 ttaatcatccaaaacaagtaagttttaatgaaaaaattgcgtaattactatttgatcaaatgtaacatctcatattttcaagacaaaatttatattt 43118905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 31850862 - 31850782
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttat-atgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||| ||||||||||||||| | |||||||| || |||||| ||||||| || ||||||||||||||| ||||    
T  31850862 tggttaagcatctaaaacaagtaagttttttatgaaaaaattatgtaatcattattttattaaaagtaacatcttatattt 31850782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 8896698 - 8896631
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||||||||||||||  |||||||| ||||||||| ||||  |||||||||||||||||||| |||||    
T  8896698 aaaacaagtaagttttcatgaaaaaattgtgtaatcattacctgatcaaaagtaacatcttatatttt 8896631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 25530658 - 25530579
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||||||||| |||| || |||||| ||||||| ||| ||||    
T  25530658 tggttcagcatccaaaacaaataagtttttatgaaaaaattgtgtaatcattactttatcaaatgtaacattttatattt 25530579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 375 - 457
Target Start/End: Complemental strand, 41064426 - 41064344
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctta 457  Q
    |||| |||| ||||||||||||||| || |||||||  || |||||||||| |||  |||| |||||||||||||||||||||    
T  41064426 aagggcatttgttaagcatccaaaataaataagttttaataaaaaagttgtctaaccattacttgatcaaaagtaacatctta 41064344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 450
Target Start/End: Complemental strand, 11736281 - 11736212
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    |||||||||||| |||||| ||||||| || ||| ||||||| |||||||||||| ||| ||||||||||    
T  11736281 attggttaagcagccaaaagaagtaagattttattaaaaagtggtgtaataattagttggtcaaaagtaa 11736212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 7833860 - 7833788
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||| |||||||||||||| || ||| ||||||| ||| |||||||| ||| |||||| |||||    
T  7833860 cattggttaagcagccaaaacaagtaagattttattaaaaagtagtgcaataattagttggtcaaaaataaca 7833788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 3624339 - 3624274
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    ||||||||||||| ||||  ||||||| || ||| ||||||| |||||||||||||||||| ||||    
T  3624339 attggttaagcattcaaaggaagtaagattttattaaaaagtggtgtaataattatttgataaaaa 3624274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 11740474 - 11740405
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||  ||||| ||||||  || ||| ||||||| |||||||||||| ||||||||||||||||    
T  11740474 tggttaagcaggcaaaagaagtaaaattttattaaaaagtggtgtaataattagttgatcaaaagtaaca 11740405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 12810289 - 12810180
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    |||||||| ||||| ||| | |||| || ||||||| |||| |||||||| | | ||  |||||||||||||||||| |||| ||  |||||||||| ||    
T  12810289 ggagaatgttaaccggtgtccaagggcaatggttaaacatctaaaacaagcatgctttcatgaaaaagttgtgtaattattactttgtcaaaagtaatat 12810190  T
Q  454 cttacatttt 463  Q
    |||| |||||    
T  12810189 cttatatttt 12810180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 355 - 462
Target Start/End: Complemental strand, 18221129 - 18221020
Alignment:
Q  355 gagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttat-atgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||| ||| ||| |||  ||||||||||||||  |||| ||| |||||| | ||||||||||||| |||| |||| || |||||| ||||||    
T  18221129 gagaatgctaactagttcctcaagtgcattggttaagcatttaaaataagcaagttttttatgaaaaagttgtataattattacttaatcaaatgtaaca 18221030  T
Q  453 tcttacattt 462  Q
    ||||| ||||    
T  18221029 tcttatattt 18221020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 463
Target Start/End: Complemental strand, 10068177 - 10068130
Alignment:
Q  416 aaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||| ||||||||||||||||||||||||| |||||| ||| |||||    
T  10068177 aaaaaattgtgtaataattatttgatcaaaaataacattttatatttt 10068130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 463
Target Start/End: Complemental strand, 23080709 - 23080658
Alignment:
Q  412 tatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||||||| || |||||| |||| ||||||||||||||||||||| |||||    
T  23080709 tatgaaaaaattatgtaatcattacttgatcaaaagtaacatcttatatttt 23080658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 26241717 - 26241643
Alignment:
Q  384 ggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttac 458  Q
    ||||||||| | ||||||||||| ||| ||  ||||||| || |||| |||||||||||||| ||||||| ||||    
T  26241717 ggttaagcaactaaaacaagtaactttttaataaaaagtagtataattattatttgatcaaatgtaacatattac 26241643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 1521314 - 1521247
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    ||||||| ||||||||||||||||||||  |||||||| ||| ||||| ||| |   ||||||||||||||    
T  1521314 tggttaaacatccaaaacaagtaagtttccatgaaaaaattgcgtaatcattgt---atcaaaagtaacat 1521247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 23317894 - 23317838
Alignment:
Q  400 caagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctt 456  Q
    |||||||||||  || ||||||| ||||||| || | ||||||||||||||||||||    
T  23317894 caagtaagttttcataaaaaagtggtgtaatcataacttgatcaaaagtaacatctt 23317838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 20775040 - 20775151
Alignment:
Q  352 atggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||  ||||| | || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  20775040 atggagaatgctaaatagtgctccaaagacattggttaagcatccaaaacaagtaagtttttatgaaaaagttatgtaataattatttgatcaaaaataa 20775139  T
Q  451 catcttacattt 462  Q
     |||||| ||||    
T  20775140 tatcttatattt 20775151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 478
Target Start/End: Original strand, 27284039 - 27284169
Alignment:
Q  351 aatggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagta 449  Q
    ||||||||||| |||| ||| ||  |||| |||||||||| ||||||||| || ||||||| ||| ||||||||||| ||| ||||||||||||||||||    
T  27284039 aatggagaatgttaacgagtaccccaagggcattggttaaacatccaaaataaataagtttttataaaaaagttgtgcaatcattatttgatcaaaagta 27284138  T
Q  450 acatcttacattttc--gacaaaatttctat 478  Q
    |||||||| |||| |  ||||||||||||||    
T  27284139 acatcttatatttccaagacaaaatttctat 27284169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 480
Target Start/End: Original strand, 12094928 - 12095057
Alignment:
Q  354 ggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||| ||| | ||| ||| || |||| ||||||||| |||||||||| ||||||||||||||||||| |||| || ||||||||||| |    
T  12094928 ggagaatgctaaccaatgctcgaagaacaatgtttaaacatccaaaataagtaagtttttatgaaaaagttgtgtaatcattactttatcaaaagtaata 12095027  T
Q  453 tcttacattttcga--caaaatttctattt 480  Q
    ||||| |||||| |  ||||||||||||||    
T  12095028 tcttatattttcaatgcaaaatttctattt 12095057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 52837391 - 52837314
Alignment:
Q  372 cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagta 449  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||||||||||  ||||||||||||    
T  52837391 cctaagggcattggttaagcatccaaaacaagaaaatttttatgaaaaagttgtgtaataattacgtgatcaaaagta 52837314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 19480508 - 19480618
Alignment:
Q  355 gagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    |||||||||||| | ||||| ||||  |||| ||||| ||  ||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||||    
T  19480508 gagaatgctaactaatgcctcaagggtattgattaagaatttaaaacaagtaagtttttatgaaaaagttgtgtaatcattactttatcaaaagtaacat 19480607  T
Q  454 cttacattttc 464  Q
    |||| ||||||    
T  19480608 cttatattttc 19480618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 2824932 - 2824855
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctta 457  Q
    ||||| ||||||||| |||||||| |||||| |||||||| |||||||||| |||| |||||||||||||||||||||    
T  2824932 cattgattaagcatctaaaacaagcaagtttttatgaaaatgttgtgtaatcattacttgatcaaaagtaacatctta 2824855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 480
Target Start/End: Original strand, 48419040 - 48419172
Alignment:
Q  351 aatggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagta 449  Q
    |||||||||||||||| ||||||| |||| || | |||||||||  |||||||||||||||  |||||||||||||| ||| |||| || ||||||||||    
T  48419040 aatggagaatgctaactagtgccttaagggcaatagttaagcatataaaacaagtaagttttcatgaaaaagttgtgcaatcattactttatcaaaagta 48419139  T
Q  450 acatcttacattttc--gacaaaatttctattt 480  Q
    |  | |||||||| |   |||||||||||||||    
T  48419140 aagttttacatttccaaaacaaaatttctattt 48419172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 348 - 480
Target Start/End: Original strand, 13967808 - 13967944
Alignment:
Q  348 tttaatggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttat-atgaaaaagttgtgtaataattatttgatcaaa 445  Q
    |||||||||||||||||||||||||| | | |  | ||||||| ||||||||||| |||| ||| | ||||||||||||| |||| |||| ||||| |||    
T  13967808 tttaatggagaatgctaaccagtgccctcatggtaatggttaaacatccaaaacatgtaatttttttatgaaaaagttgtataatcattacttgataaaa 13967907  T
Q  446 agtaacatcttacattttc--gacaaaatttctattt 480  Q
    | |||||||||| |||  |  ||||||||||||||||    
T  13967908 aataacatcttatattaccaagacaaaatttctattt 13967944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 464
Target Start/End: Complemental strand, 39810847 - 39810735
Alignment:
Q  352 atggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||| | ||||  ||||  ||||||||| |||||||||||| || ||||  |||| ||| ||||||||| |||| ||||||||||||||    
T  39810847 atggagaatgctaactattgccccaagggtattggttaaacatccaaaacaaatatgttttcatgataaa-ttgtgtaattattacttgatcaaaagtaa 39810749  T
Q  451 catcttacattttc 464  Q
    ||||||| ||||||    
T  39810748 catcttatattttc 39810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 462
Target Start/End: Complemental strand, 7437973 - 7437863
Alignment:
Q  353 tggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||||||||||| |||| | | |  ||||||||||||| ||||| ||  |||||| || |||||||||||||||| || | ||| |||||||||||    
T  7437973 tggagaatgctaaccaatgccctgatggtattggttaagcattcaaaataaacaagtttttacgaaaaagttgtgtaatcatgacttgttcaaaagtaac 7437874  T
Q  452 atcttacattt 462  Q
    |||||| ||||    
T  7437873 atcttatattt 7437863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 55126892 - 55126810
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatc-aaaagtaacatcttacattttc 464  Q
    |||||||| ||| |||| || ||||||| ||||||||||||||||||| ||||||| ||| ||||||||||| ||| ||||||    
T  55126892 tggttaagtatctaaaataaataagtttttatgaaaaagttgtgtaatcattattttatcaaaaagtaacattttatattttc 55126810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 27133547 - 27133628
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||||| |||| | |||||||| |||||||||||||| |||| |||| |||| ||||| ||| |||||| ||||    
T  27133547 attggttaagcatctaaaataggtaagtttttatgaaaaagttgtataatcattacttgaacaaaaataatatcttatattt 27133628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 46399828 - 46399901
Alignment:
Q  373 ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    |||||||||||| |||||||| |||||||| ||||||| ||||||||| |||||| || |||| || |||||||    
T  46399828 ctaaggacattgattaagcatacaaaacaaataagtttttatgaaaaaattgtgtgatcattactttatcaaaa 46399901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 2565510 - 2565454
Alignment:
Q  397 aaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    |||||||||||||| |||  |||||||||||||| |||| |||||||||||||||||    
T  2565510 aaacaagtaagtttttatagaaaagttgtgtaatcattacttgatcaaaagtaacat 2565454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 462
Target Start/End: Complemental strand, 16341220 - 16341136
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||| ||||||||| || ||| ||| ||||||||| || |||||| |||| || |||||||||||||| ||| ||||    
T  16341220 gacattggttaaacatccaaaataaataaatttttatgaaaaaattatgtaatcattacttaatcaaaagtaacattttatattt 16341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 22019595 - 22019683
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||||||||| ||| ||| ||||||||||||||||  | |||||||||||||||| |||| || ||  ||| |||||||||| |||||    
T  22019595 aaggacattggataaacattcaaaacaagtaagttttcaagaaaaagttgtgtaatcattacttaatagaaaataacatcttatatttt 22019683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 31089878 - 31089800
Alignment:
Q  402 agtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt--tcgacaaaatttctatt 479  Q
    ||||||||| ||||||||||||||||||| |||| || |||||||||||||| ||| ||||  | |||||||||||||||    
T  31089878 agtaagtttttatgaaaaagttgtgtaatcattactttatcaaaagtaacat-ttatatttcctagacaaaatttctatt 31089800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 12076543 - 12076442
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctat 478  Q
    ||||||||| |||| ||||||||||||||   || ||||| |||||| || |||  |||||||||| |||||||||| ||||||  |||||||||| |||    
T  12076543 attggttaaacatctaaaacaagtaagttctcatcaaaaaattgtgtgatcattgcttgatcaaaattaacatcttatattttcaagacaaaatttttat 12076444  T
Q  479 tt 480  Q
    ||    
T  12076443 tt 12076442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 55090752 - 55090845
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagt 448  Q
    |||||||| ||| ||||| || |||| |||||||||||| | ||||||||||| ||| ||| ||||||||||||||| || | || |||||||||    
T  55090752 ggagaatgttaaacagtgtcttaggatattggttaagcaactaaaacaagtaactttttat-aaaaagttgtgtaattataacttaatcaaaagt 55090845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 31861511 - 31861462
Alignment:
Q  413 atgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  31861511 atgaaaaatttgtgtaatcattacttgatcaaaagtaacatcttatattt 31861462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 419
Target Start/End: Complemental strand, 36506815 - 36506747
Alignment:
Q  352 atggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaa 419  Q
    ||||||||||||||||| ||| | |||| ||||| ||||||||||||||||||||| |||  |||||||    
T  36506815 atggagaatgctaaccaatgctccaagggcattgcttaagcatccaaaacaagtaaattttcatgaaaa 36506747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 29171142 - 29171180
Alignment:
Q  413 atgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  29171142 atgaaaaagttgtgcaatcattatttgatcaaaagtaac 29171180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 3708722 - 3708771
Alignment:
Q  413 atgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||||||||| |||| |||||||||| |||||| ||| ||||    
T  3708722 atgaaaaagttgtgtaatcattacttgatcaaaaataacatattaaattt 3708771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 9395157 - 9395194
Alignment:
Q  373 ctaaggacattggttaagcatccaaaacaagtaagttt 410  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  9395157 ctaaagacattgattaagcatccaaaacaagtaagttt 9395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 44190255 - 44190300
Alignment:
Q  419 aagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||| |||||| |||| ||||||||||||||||||||| ||||||    
T  44190255 aagttatgtaattattacttgatcaaaagtaacatcttatattttc 44190300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 457
Target Start/End: Original strand, 44639901 - 44639942
Alignment:
Q  416 aaaaagttgtgtaataattatttgatcaaaagtaacatctta 457  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  44639901 aaaaagttgtgtaatcattacttaatcaaaagtaacatctta 44639942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 42595268 - 42595216
Alignment:
Q  412 tatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||||| ||||||||| |||| || |||||||||||||| ||| ||||||    
T  42595268 tatgaaaaaattgtgtaatcattactttatcaaaagtaacattttatattttc 42595216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 447
Target Start/End: Original strand, 48202457 - 48202549
Alignment:
Q  356 agaatgctaaccagtgcctaagga-cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaag 447  Q
    ||||||||||||||||||  |||  |||||||||||||  ||||||| |||||||| ||| | || || ||||||| |||| || ||||||||    
T  48202457 agaatgctaaccagtgccccaggggcattggttaagcaaacaaaacaggtaagtttttataagaaggtagtgtaattattacttcatcaaaag 48202549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 354 - 480
Target Start/End: Original strand, 48338783 - 48338912
Alignment:
Q  354 ggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||| |||||    
T  48338783 ggagaatgctaactagtgctctaagggcaatggttaagcatccaaaacaagtaagtttttataaaaaagttgtgtaataattactttatcaaaaataaca 48338882  T
Q  453 tcttacattttc--gacaaaatttctattt 480  Q
    ||||| |||| |  || |||||||||||||    
T  48338883 tcttatatttccaagataaaatttctattt 48338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 480
Target Start/End: Original strand, 4020096 - 4020197
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctat 478  Q
    |||||||||| | ||||||||||||||||| ||||||||| |||||||||||||| || ||||||| |||||| ||| ||||||  ||||||||||||||    
T  4020096 attggttaagtaaccaaaacaagtaagtttttatgaaaaaattgtgtaataattacttaatcaaaattaacattttatattttcaagacaaaatttctat 4020195  T
Q  479 tt 480  Q
    ||    
T  4020196 tt 4020197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 28709681 - 28709580
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctat 478  Q
    ||||||||||||| ||||| |||||||||| ||| |||||||||| |||| |||||||||||||||||||||| ||| ||||||  || |||||||||||    
T  28709681 attggttaagcattcaaaataagtaagtttctataaaaaagttgtataatcattatttgatcaaaagtaacattttatattttcaagataaaatttctat 28709582  T
Q  479 tt 480  Q
    ||    
T  28709581 tt 28709580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 374 - 480
Target Start/End: Complemental strand, 635827 - 635719
Alignment:
Q  374 taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaa 471  Q
    ||||| ||||||||||||||||||||||  ||||||| |||  |||||||||||||| ||||||| ||||||||||||||||||  | |||  |||||||    
T  635827 taagggcattggttaagcatccaaaacatataagtttttattgaaaagttgtgtaatcattatttaatcaaaagtaacatcttatttattcaagacaaaa 635728  T
Q  472 tttctattt 480  Q
    |||||||||    
T  635727 tttctattt 635719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 44698218 - 44698317
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||  ||| ||||||| ||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||  ||||||||||||||||    
T  44698218 tggttaaatatctaaaacaaataagtttttatgaaaaaattgtgtaatcattattttatcaaaagtaacatcttatattttcaagacaaaatttctattt 44698317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 29032410 - 29032492
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||| ||||| ||| |||||||| |||||| ||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  29032410 attgattaagtatctaaaacaagcaagtttttatgaaaaagttgtgtaatcattacttgatcaaaagtaacatcttatatttt 29032492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 462
Target Start/End: Complemental strand, 31494148 - 31494039
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggac-attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||||||||   |||  || |||||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||| ||||     
T  31494148 ggagaatgctaaccagtgcccttggaatatgggttaaacatccaaaacaagtaagtttttatgaaaaaattgtgtaatcattatttgattaaaattaact 31494049  T
Q  453 tcttacattt 462  Q
    ||||| ||||    
T  31494048 tcttatattt 31494039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 480
Target Start/End: Original strand, 50958863 - 50958959
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| |||  |||||||||| |||||| ||| |||| |  ||||||||||||||||    
T  50958863 ttaagcatccaaaacaagtaagtttttatgaaaaaattgtgtaatcatttcttgatcaaaaataacatgttatatttccaagacaaaatttctattt 50958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 354 - 464
Target Start/End: Complemental strand, 4128836 - 4128725
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||||| |||||  |||| || ||||||||||||||||||||||||||||  |||||||  ||||||||| |||| || ||||||| ||| |    
T  4128836 ggagaatgctaaccggtgccccaagggcaatggttaagcatccaaaacaagtaagttttcatgaaaatattgtgtaatcattactttatcaaaaataata 4128737  T
Q  453 tcttacattttc 464  Q
    ||||| ||||||    
T  4128736 tcttatattttc 4128725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 11676859 - 11676750
Alignment:
Q  373 ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaa 470  Q
    |||||| |||||||||| ||||||||||||| ||||||  | |||||| |||||| || |||||||||||||||||||| ||||  ||||||  ||||||    
T  11676859 ctaagggcattggttaaacatccaaaacaagcaagttttcaagaaaaaattgtgttatcattatttgatcaaaagtaacgtcttttattttcaagacaaa 11676760  T
Q  471 atttctattt 480  Q
    |||| |||||    
T  11676759 atttatattt 11676750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 457
Target Start/End: Complemental strand, 42437858 - 42437755
Alignment:
Q  353 tggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||||||||||||||||  |||| |||||||||||||||||||||| | ||  || |||||||||||| |||||| ||||   |||||||||||||    
T  42437858 tggagaatgctaaccagtgccccaagggcattggttaagcatccaaaacacgcaaaattttatgaaaaagttatgtaatcatta--cgatcaaaagtaac 42437761  T
Q  452 atctta 457  Q
    ||||||    
T  42437760 atctta 42437755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 49261780 - 49261879
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||||||||||||||  |||  |||||||| ||||||||| |||| |  |||||||||||||||||| |||| |  ||||||||||||||||    
T  49261780 tggttaagcatccaaaacaagtacattttcatgaaaaaattgtgtaattattactctatcaaaagtaacatcttatatttacaagacaaaatttctattt 49261879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 54801441 - 54801362
Alignment:
Q  385 gttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||||| ||||| |||||||||| ||||||||| ||||||||| |||| || | |||||||||||||||| ||||||    
T  54801441 gttaagcatacaaaataagtaagtttttatgaaaaaattgtgtaattattactttagcaaaagtaacatcttatattttc 54801362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 25319455 - 25319544
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||||||||||| |||| ||||||| |||||||  ||| ||||| |||||||| |||||||  ||||||||||||| ||| ||||||    
T  25319455 aaggacattggttaaacatctaaaacaattaagttttaatgtaaaaggtgtgtaatcattatttagtcaaaagtaacattttatattttc 25319544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 6785910 - 6785808
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaa-gttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttcta 477  Q
    ||||||||| |||| |||||||| ||||||  |||||||| | |||||||| |||| ||||||||||||||||| ||| ||||||  ||||||| |||||    
T  6785910 attggttaaacatcaaaaacaagcaagttttcatgaaaaaagatgtgtaatcattacttgatcaaaagtaacattttatattttcaagacaaaaattcta 6785811  T
Q  478 ttt 480  Q
    |||    
T  6785810 ttt 6785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 463
Target Start/End: Original strand, 8326110 - 8326217
Alignment:
Q  356 agaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatc 454  Q
    |||||| |||||| ||| |||| ||||||| ||||| ||| ||||||| ||||||| |||||||| || ||||||| |||  |||||||||||||||||     
T  8326110 agaatgttaaccaatgctctaaagacattgattaagtatctaaaacaaataagtttttatgaaaa-gtggtgtaatcattgcttgatcaaaagtaacata 8326208  T
Q  455 ttacatttt 463  Q
    ||| |||||    
T  8326209 ttatatttt 8326217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 55446733 - 55446831
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    ||||||| |||| |||| |||||||||| ||| ||||||||||||||| |||| || || ||||||||||||||| |||| |  |||||||||| |||||    
T  55446733 tggttaaacatctaaaagaagtaagtttttat-aaaaagttgtgtaatcattactttattaaaagtaacatcttatatttccaagacaaaatttttattt 55446831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 435
Target Start/End: Original strand, 49543194 - 49543257
Alignment:
Q  372 cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataatta 435  Q
    |||||||||||||||||||||| |||||| ||||| |||  ||||||||  |||||||||||||    
T  49543194 cctaaggacattggttaagcattcaaaacgagtaaattttcatgaaaaaagtgtgtaataatta 49543257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 450
Target Start/End: Original strand, 24344864 - 24344898
Alignment:
Q  416 aaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    |||||||||||||||||||||||||||||||||||    
T  24344864 aaaaagttgtgtaataattatttgatcaaaagtaa 24344898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 34146020 - 34145939
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||| ||||||||||||||| ||||| ||| |||||| || |||| |||| |||| |||||||||| |||||||||| ||||    
T  34146020 cattgattaagcatccaaaactagtaaattt-tatgaacaaattgtataattattacttgatcaaaaataacatcttatattt 34145939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 26613180 - 26613099
Alignment:
Q  382 ttggttaagcatccaaaacaagtaagtttatat-gaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||||||||||||||||||||  ||  |||||||| |||||| |||| ||||| |||| |||||| ||| ||||    
T  26613180 ttggttaagcatccaaaacaagtaagttttcataaaaaaagttatgtaattattacttgattaaaaataacattttatattt 26613099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 354 - 430
Target Start/End: Original strand, 46647454 - 46647530
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaat 430  Q
    ||||||||||||||||||||| |||||||||||||||| | | | ||||||||||||| ||  ||||||| |||||||    
T  46647454 ggagaatgctaaccagtgcctcaaggacattggttaag-aactataacaagtaagtttttaataaaaagtagtgtaat 46647530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 12109653 - 12109731
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||||||||||  || ||| |||||||||||||| |||| |||| ||  | |||||||| |||||| ||||||    
T  12109653 ttaagcatccaaaacaaacaattttttatgaaaaagttgtataattattacttagttaaaagtaatatcttatattttc 12109731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 40460224 - 40460308
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagt-aacatcttacattttc 464  Q
    ||||||||||| || ||||| ||||||||||  |||||||  || |||||| ||||||| ||||||||| ||||||||| ||||||    
T  40460224 cattggttaagaatacaaaataagtaagttttcatgaaaatattatgtaatcattattt-atcaaaagtaaacatcttatattttc 40460308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 446
Target Start/End: Original strand, 53818824 - 53818889
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    |||| |||||||||||||| || |||||||  ||||||||||||| |||| |||| ||||| ||||    
T  53818824 attgattaagcatccaaaataaataagttttaatgaaaaagttgtataatcattacttgattaaaa 53818889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 341 - 480
Target Start/End: Original strand, 22293941 - 22294083
Alignment:
Q  341 tctattatttaatggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttg 439  Q
    |||||||| ||  ||||||||||||||||||||  ||||  ||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  22293941 tctattatatataggagaatgctaaccagtgccacaagggtattggttaaacattcaaaacaagtaagtttttatgaaaaagttgtgcaataattatttg 22294040  T
Q  440 atcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||  || |||||| |||| |  ||||||||||||||||    
T  22294041 atcaaaaccaatatcttatatttccaagacaaaatttctattt 22294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 464
Target Start/End: Complemental strand, 30840736 - 30840630
Alignment:
Q  358 aatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctt 456  Q
    |||| ||||||||| ||||| | ||||| |||||||||||||||||||||||||  |  ||||||||||||||| |||| ||||||||||||||||||||    
T  30840736 aatgttaaccagtgtcctaaaggcattgattaagcatccaaaacaagtaagttttcaa-aaaaagttgtgtaatcattacttgatcaaaagtaacatctt 30840638  T
Q  457 acattttc 464  Q
    | ||||||    
T  30840637 atattttc 30840630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 11815924 - 11816010
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    ||||||||||||||| |||||||||  |||||||| |||| || |||||||||||||||||| ||||||  ||||||||||||||||    
T  11815924 aaaacaagtaagtttttatgaaaaatatgtgtaatcattactttatcaaaagtaacatcttatattttcaagacaaaatttctattt 11816010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 1056807 - 1056888
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||| ||||||||||| ||||||| ||||||||| || |||||| |||||||||| ||||||||||| ||| ||||    
T  1056807 attggttaagtatccaaaacaaataagtttttatgaaaaaattatgtaatcattatttgattaaaagtaacatattatattt 1056888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 480
Target Start/End: Original strand, 27544581 - 27544688
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaat 472  Q
    |||| |||| ||||| |||||||||||||||| |||  |||||||||||||||||| ||||  |||| |||| |||||||||| ||||||  || |||||    
T  27544581 aagggcattagttaaacatccaaaacaagtaaattttcatgaaaaagttgtgtaatcattacatgataaaaaataacatcttatattttcaagataaaat 27544680  T
Q  473 ttctattt 480  Q
    ||||||||    
T  27544681 ttctattt 27544688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 36482048 - 36482150
Alignment:
Q  379 acattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttct 476  Q
    ||||||||||| |||| |||| || |||||||  || ||||||||||||||  |||||||||||||||||||||||||| ||||||   |||||||||||    
T  36482048 acattggttaaacatctaaaataa-taagttttcataaaaaagttgtgtaaacattatttgatcaaaagtaacatcttatattttcaaaacaaaatttct 36482146  T
Q  477 attt 480  Q
    ||||    
T  36482147 attt 36482150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 480
Target Start/End: Complemental strand, 30293936 - 30293837
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt--cgacaaaatttctattt 480  Q
    ||||||| ||| ||||||||  ||||||  |||||||| || |||||| |||| ||||||||||||||||||||| |||||   ||||||||||||||||    
T  30293936 tggttaaccattcaaaacaaacaagttttcatgaaaaaattatgtaatcattacttgatcaaaagtaacatcttatatttttaagacaaaatttctattt 30293837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 380 - 446
Target Start/End: Original strand, 7319255 - 7319321
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    ||||||||||||||||||||  |||||| || ||| |||||||||||||||||||| ||||| ||||    
T  7319255 cattggttaagcatccaaaaagagtaagattctattaaaaagttgtgtaataattacttgataaaaa 7319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 404 - 462
Target Start/End: Complemental strand, 14044772 - 14044714
Alignment:
Q  404 taagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||| |||||| ||||    
T  14044772 taagtttttataaaaaagttgtgtaataattacttgatcaaaagtaatatcttatattt 14044714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 462
Target Start/End: Complemental strand, 27366114 - 27366005
Alignment:
Q  354 ggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||  || || |||| |||||||||||||||||||||||  | ||||  |||||||| ||| ||||| |||||||| || ||||||| |    
T  27366114 ggagaatgctaaccgatgtcccaagggcattggttaagcatccaaaacaaacatgttttcatgaaaaaattgcgtaatcattatttggtctaaagtaata 27366015  T
Q  453 tcttacattt 462  Q
    ||||| ||||    
T  27366014 tcttatattt 27366005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 28511265 - 28511181
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaa-gttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||||| |||||||| |||||||| ||| ||||| || ||||||| |||| || ||||||||||| | |||||||||||    
T  28511265 attggttaagcaaccaaaacatgtaagtttttataaaaaaagtagtgtaattattaattcatcaaaagtaaaaacttacattttc 28511181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 41175471 - 41175392
Alignment:
Q  353 tggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaata 431  Q
    ||||||||||||||||||| || ||| | ||||||||| ||||||||  ||||||||||  |||||||| ||||||||||    
T  41175471 tggagaatgctaaccagtgtcccaagaatattggttaaacatccaaattaagtaagttttcatgaaaaaattgtgtaata 41175392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Complemental strand, 2089196 - 2089150
Alignment:
Q  416 aaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  2089196 aaaaaattgtgtaataattatttgatcaaaagtaaaatcttatattt 2089150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 5471316 - 5471238
Alignment:
Q  351 aatggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgta 428  Q
    ||||||||||| |||| ||||||  || |||||||||||||||||||||||||  ||||||   |||||||||||||||    
T  5471316 aatggagaatgttaactagtgccccaatgacattggttaagcatccaaaacaaacaagttttcctgaaaaagttgtgta 5471238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 452
Target Start/End: Original strand, 42491636 - 42491709
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttg-tgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||||||||||||||| |||||| ||  |||||  || |||||| |||||||| ||||||||||||    
T  42491636 cattggttaagcatccaaaacaagaaagtttttacaaaaaaaatgatgtaattattatttgctcaaaagtaaca 42491709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 408
Target Start/End: Complemental strand, 32506493 - 32506439
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagt 408  Q
    ||||||||||||  |||| ||| | ||||||||||| ||||||||||||||||||    
T  32506493 ggagaatgctaaagagtgtctatgaacattggttaaacatccaaaacaagtaagt 32506439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 448
Target Start/End: Original strand, 8435027 - 8435122
Alignment:
Q  354 ggagaatgctaaccagtgcc--taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagt 448  Q
    |||||||| |||||||||||  | ||| |||||||||||||||||||| ||||||| || ||| ||||| | || |||| |||| ||| ||||||||    
T  8435027 ggagaatgttaaccagtgcccctgagg-cattggttaagcatccaaaataagtaagattttattaaaaaatggtataattattagttggtcaaaagt 8435122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 480
Target Start/End: Original strand, 41645031 - 41645131
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttcta 477  Q
    ||||| ||||||||| |||| |||||| |||  ||||||  |||||||||| |||| ||||| |||| ||| |||||| ||||||  |||||||||| ||    
T  41645031 cattgcttaagcatctaaaataagtaaattttcatgaaa--gttgtgtaatcattacttgataaaaaataatatcttatattttctagacaaaattttta 41645128  T
Q  478 ttt 480  Q
    |||    
T  41645129 ttt 41645131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 353 - 482
Target Start/End: Complemental strand, 8001891 - 8001759
Alignment:
Q  353 tggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    |||||||||||||| |||||| ||||| || |||||||||||| ||||||||||| |||  ||| |||||||||||||| |||| || ||||||||||||    
T  8001891 tggagaatgctaacgagtgccctaaggccaatggttaagcatctaaaacaagtaaattttcatgtaaaagttgtgtaatcattactttatcaaaagtaac 8001792  T
Q  452 atcttacattttc--gacaaaatttctatttct 482  Q
    |||||| ||||||  || |||||||||||||||    
T  8001791 atcttatattttcaagataaaatttctatttct 8001759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 352 - 480
Target Start/End: Complemental strand, 13969244 - 13969113
Alignment:
Q  352 atggagaatgctaaccagtgcctaaggac-attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    |||||||||| |||||||||||  | ||  |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| || || ||||||||    
T  13969244 atggagaatgttaaccagtgccccaagagtattggttaagcaaccaaaacaagtaagtttttatgaaaaaattgtgtaataattacttaattaaaagtaa 13969145  T
Q  451 catcttacattttc--gacaaaatttctattt 480  Q
    ||| ||| ||||||  ||||||||||||||||    
T  13969144 cattttatattttcaagacaaaatttctattt 13969113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 354 - 480
Target Start/End: Original strand, 32187024 - 32187152
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||| ||||| |||||| |||||||||||||||| || |||||||||||| ||| |||  |||||||||| ||| ||||| |||||||||||||||    
T  32187024 ggagaatgataaccggtgcctcaaggacattggttaagaattcaaaacaagtaaattt-tattgaaaagttgtgcaattattatctgatcaaaagtaaca 32187122  T
Q  453 tcttacattttc--gacaaaatttctattt 480  Q
    ||||| ||||||  ||||||||||||||||    
T  32187123 tcttatattttcaagacaaaatttctattt 32187152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 463
Target Start/End: Complemental strand, 33148273 - 33148164
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    ||||||||||||| | |||  |||| |||| ||||| ||| |||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||| |||    
T  33148273 ggagaatgctaactaatgctcaagggcatttgttaaacattcaaaacaagtaagtttttatgaaaaaattgtgtaatcattacttgatcaaaagtagcat 33148174  T
Q  454 cttacatttt 463  Q
    |||| |||||    
T  33148173 cttatatttt 33148164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 347 - 462
Target Start/End: Complemental strand, 30941619 - 30941503
Alignment:
Q  347 atttaatggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaa 445  Q
    |||||||| | ||||||||||| |||| |  || ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| |||    
T  30941619 atttaatgaaaaatgctaaccaatgcccttggggcattggttaagcatccagaacaagtaagtttacatgaaaaagttgtgtaattattgtttgataaaa 30941520  T
Q  446 agtaacatcttacattt 462  Q
    | |||||| ||| ||||    
T  30941519 aataacatgttatattt 30941503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 46295982 - 46295903
Alignment:
Q  385 gttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||||||||||| ||||||| |||||||||||||||| || |||| ||||||||||||||||| ||| ||||||    
T  46295982 gttaagcatccaaaacaaataagtttttatgaaaaagttgtgtcatgattacttgatcaaaagtaacattttatattttc 46295903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 10226578 - 10226476
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttcta 477  Q
    |||||||||||  || |||||| ||||||||  |||||||||||||||||| |||| || ||||||| |||||||||| ||||||  |||||||||||||    
T  10226578 cattggttaagtctctaaaacaggtaagttttcatgaaaaagttgtgtaatcattactttatcaaaattaacatcttatattttcaagacaaaatttcta 10226479  T
Q  478 ttt 480  Q
    |||    
T  10226478 ttt 10226476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 464
Target Start/End: Complemental strand, 17169383 - 17169302
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||||| ||||||| |||||||  ||||||||||||| ||||||||| || ||||||| |||||||||| ||||||    
T  17169383 tggttaagcatctaaaacaaataagttttcatgaaaaagttgtataataattactttatcaaaaataacatcttatattttc 17169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 383 - 477
Target Start/End: Original strand, 26829492 - 26829588
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttcta 477  Q
    |||||||||||| |||| |||||| |||  |||||||||||||||||| |||| || |||||||||||||||||| |||| |  |||||||||||||    
T  26829492 tggttaagcatctaaaataagtaaattttcatgaaaaagttgtgtaatcattactttatcaaaagtaacatcttatatttccaagacaaaatttcta 26829588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 357 - 464
Target Start/End: Original strand, 27688451 - 27688560
Alignment:
Q  357 gaatgctaaccagtgc-ctaaggacattggttaagcatccaaaa-caagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatc 454  Q
    ||||| |||||| ||| ||||||| | ||||||||||| ||||| |||||||||||  |||||||| ||||||||| |||| || |||||||||||||||    
T  27688451 gaatgttaaccaatgcgctaaggataatggttaagcattcaaaaacaagtaagttttcatgaaaaacttgtgtaatcattactttatcaaaagtaacatc 27688550  T
Q  455 ttacattttc 464  Q
    ||| ||||||    
T  27688551 ttatattttc 27688560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 49731304 - 49731198
Alignment:
Q  355 gagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    |||||||||||| | ||| | ||||||||||||||| || | ||||||||||||||| ||  ||||||| || |||| |||||||| ||||| |||||||    
T  49731304 gagaatgctaactaatgcatcaaggacattggttaaacaactaaaacaagtaagtttttaataaaaagtagtataattattatttggtcaaatgtaacat 49731205  T
Q  454 cttacat 460  Q
    |||||||    
T  49731204 cttacat 49731198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 34347620 - 34347556
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||||||||| | | ||||||||||||||||||| |||| || |||||||||||    
T  34347620 ttaagcatccaaaacaagtaaatctttatgaaaaagttgtgtaatcattactttatcaaaagtaa 34347556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 38597477 - 38597560
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||||||||| |||||||||||||||||||  || |||||||||| |||| |||| || ||||||||| | |||||| |||||    
T  38597477 cattggttaagtatccaaaacaagtaagttttaataaaaaagttgtctaatcattacttaatcaaaagtgatatcttatatttt 38597560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 50015896 - 50015808
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||| ||||| ||||| ||||||||||| ||| ||| |||||||||||||| ||||  ||  |||||||||||||| ||| || |||||    
T  50015896 aagggcattgtttaagtatccaaaacaaataaatttttatgaaaaagttgtataatcgttgcttgatcaaaagtaatatcatatatttt 50015808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 3529106 - 3529165
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatt 437  Q
    |||||||||||||||||||||| |||||| |||  || ||||| ||||||||| ||||||    
T  3529106 gacattggttaagcatccaaaataagtaaattttcataaaaaaattgtgtaattattatt 3529165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Original strand, 11449073 - 11449140
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||| |||||||||| |||||||||||| |||||| ||||  ||||||||| |||||| ||| |||||    
T  11449073 aaaataagtaagtttttatgaaaaagttatgtaattattacatgatcaaaattaacatattatatttt 11449140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 463
Target Start/End: Original strand, 39238844 - 39238911
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||||||||||||| ||  ||||| | ||||||| |||| ||||||||| |||||| ||||||||||    
T  39238844 aaaacaagtaagtttttaataaaaaatagtgtaatcattacttgatcaaatgtaacaacttacatttt 39238911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 457
Target Start/End: Original strand, 52429628 - 52429702
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaa-agttgtgtaataattatttgatcaaaagtaacatctta 457  Q
    |||||||||||| |||||||||||| ||  ||||||| ||||||||||| |||| | |||||| ||||||||||||    
T  52429628 tggttaagcatc-aaaacaagtaagctttaatgaaaaaagttgtgtaatcattactagatcaagagtaacatctta 52429702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 452
Target Start/End: Complemental strand, 26890210 - 26890112
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||| ||||| ||||| ||||  |||||||||| | ||||||||||||||||| ||| ||  ||| ||||||| | || ||  ||||||||||||    
T  26890210 ggagaatgataaccggtgccaaaggttattggttaagtaaccaaaacaagtaagtttttataaatgagtagtgtaattaatagttagtcaaaagtaaca 26890112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 410
Target Start/End: Original strand, 12527581 - 12527618
Alignment:
Q  373 ctaaggacattggttaagcatccaaaacaagtaagttt 410  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  12527581 ctaagggcattggttaagcatccaaaataagtaagttt 12527618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 457
Target Start/End: Original strand, 14884885 - 14884945
Alignment:
Q  399 acaagtaagtttatatgaaaaagttgtgtaataattatttg--atcaaaagtaacatctta 457  Q
    |||||||||||| ||| |||| |||||| ||| ||||||||  ||||||||||||||||||    
T  14884885 acaagtaagtttttataaaaatgttgtggaatcattatttgatatcaaaagtaacatctta 14884945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 410
Target Start/End: Complemental strand, 17644896 - 17644839
Alignment:
Q  354 ggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagttt 410  Q
    ||||||||||||||| || |||  || || ||||||||||||||||||||||||||||    
T  17644896 ggagaatgctaaccaatgtccttggggcaatggttaagcatccaaaacaagtaagttt 17644839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 462
Target Start/End: Complemental strand, 37597247 - 37597166
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||||||||||||||||||  || |||   ||||| | ||| ||||| |||| |||||||||| ||| |||||||||||    
T  37597247 attggttaagcatccaaaacaaacaaattttcttgaaagaattgcgtaatcattacttgatcaaaaataaaatcttacattt 37597166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 48502563 - 48502647
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||||||| | || ||| | ||||  || ||| |||||||||||||||||||| ||  |||||||||||| |||| ||||||    
T  48502563 cattggttaagtaacctaaagaggtaaaattttattaaaaagttgtgtaataattagttagtcaaaagtaacagcttatattttc 48502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 27082277 - 27082377
Alignment:
Q  350 taatggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagt 448  Q
    ||||||||||||||||  ||||||  ||||||||||||||| || ||||||||||||| |||  |||||||||||||||||| |||||||||||||||||    
T  27082277 taatggagaatgctaaatagtgccccaaggacattggttaaacaaccaaaacaagtaaattttcatgaaaaagttgtgtaatgattatttgatcaaaagt 27082376  T
Q  449 a 449  Q
    |    
T  27082377 a 27082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 480
Target Start/End: Complemental strand, 5611280 - 5611143
Alignment:
Q  345 ttatttaatggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatca 443  Q
    |||||||| |||||||||||||||||  | ||| |  ||||||||| |||||||||||||||||||| |||||| ||||||| |||| |||||||||| |    
T  5611280 ttatttaa-ggagaatgctaaccagtatcataaaggtattggttaaacatccaaaacaagtaagtttttatgaataagttgtataattattatttgatta 5611182  T
Q  444 aaagtaacatcttacatt--ttcgacaaaatttctattt 480  Q
    |||||||||||||| |||  |  ||||||||||||||||    
T  5611181 aaagtaacatcttatatttctaagacaaaatttctattt 5611143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 356 - 480
Target Start/End: Original strand, 32134018 - 32134145
Alignment:
Q  356 agaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatc 454  Q
    ||||||||||| |||||| ||||| ||||||||||||||| |||| ||||||||||   ||||||||||||||||| |||| ||||| |||| |||||||    
T  32134018 agaatgctaactagtgccctaagggcattggttaagcatctaaaataagtaagttttcttgaaaaagttgtgtaatcattacttgataaaaaataacatc 32134117  T
Q  455 ttacattttc--gacaaaatttctattt 480  Q
    ||| ||| ||   |||||||||||||||    
T  32134118 ttatattctcaaaacaaaatttctattt 32134145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 10008188 - 10008261
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||||||||| |||||| |||||||||| ||| ||||||| ||||||| |||| |||||||||||||||    
T  10008188 gacattggttaagcaaccaaaagaagtaagtttttattaaaaagtggtgtaattattacttgatcaaaagtaac 10008261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 381 - 464
Target Start/End: Original strand, 18493241 - 18493324
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||  || |||| ||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||| ||| ||||||    
T  18493241 attggttaaatattcaaatcaagtaagtttttataaaaaagttttgtaataattacttgatcaaaagtaacattttatattttc 18493324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 356 - 457
Target Start/End: Complemental strand, 8636885 - 8636783
Alignment:
Q  356 agaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatc 454  Q
    ||||||||||||  || |||||||| | || |||||||| ||||| ||||||||||  ||||||||||| |||||| |||| || |||||||||||||||    
T  8636885 agaatgctaaccgatgtcctaaggaaaatgattaagcatacaaaataagtaagttttcatgaaaaagttatgtaatcattactttatcaaaagtaacatc 8636786  T
Q  455 tta 457  Q
    |||    
T  8636785 tta 8636783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 435
Target Start/End: Original strand, 31223165 - 31223248
Alignment:
Q  354 ggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatg-aaaaagttgtgtaataatta 435  Q
    |||||||||||||| |||| | |||| |||||||||| ||||||||||||||||||||  ||| ||||||||||||||| ||||    
T  31223165 ggagaatgctaaccggtgctccaagggcattggttaaacatccaaaacaagtaagttttcatgaaaaaagttgtgtaatcatta 31223248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 464
Target Start/End: Original strand, 227303 - 227416
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatg-aaaaagttgtgtaataatt-atttgatcaaaagtaa 450  Q
    |||||||| ||| |||||||| ||||  | ||||||||||||||||| ||||||| || |||| ||||| ||||||||| |||  ||| |||||||||||    
T  227303 ggagaatgttaatcagtgcctcaagggaaatggttaagcatccaaaagaagtaagattttatgaaaaaaattgtgtaatcattgtttttatcaaaagtaa 227402  T
Q  451 catcttacattttc 464  Q
    ||||||| ||||||    
T  227403 catcttatattttc 227416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 462
Target Start/End: Original strand, 2470349 - 2470430
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||||| |||| | |||||||| |||||||||||||| |||| |||| |||| ||||| ||| |||||| ||||    
T  2470349 attggttaagcatctaaaataggtaagtttttatgaaaaagttgtataatcattacttgaacaaaaataatatcttatattt 2470430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 2911583 - 2911499
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||||||   ||||||| ||||||| ||  ||||||| || |||| |||| ||||||||| ||||||||||||||||||    
T  2911583 cattggttaagcaattaaaacaaataagtttttaaaaaaaagtagtataatcattacttgatcaaatgtaacatcttacattttc 2911499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 464
Target Start/End: Original strand, 30929465 - 30929577
Alignment:
Q  354 ggagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttat-atgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||||||| ||||| | |||| ||||||||||||  | ||||||||||| ||| | |  ||||||| || |||| |||||||||||||| |||||    
T  30929465 ggagaatgctaactagtgctccaagggcattggttaagcgactaaaacaagtaaattttttaataaaaagtagtataattattatttgatcaaatgtaac 30929564  T
Q  452 atcttacattttc 464  Q
    |||||| ||||||    
T  30929565 atcttaaattttc 30929577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 19418593 - 19418664
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||||||| ||||||| || ||| |||||||  |||||||||||  || ||||||||||||    
T  19418593 attggttaagcatccaaaagaagtaagattttattaaaaagtgatgtaataattagctggtcaaaagtaaca 19418664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 17345963 - 17345875
Alignment:
Q  375 aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||| ||||||||||||| |||||||| ||| |||   |||||||||| ||||||   || ||||||||||||||||| ||| |||||    
T  17345963 aaggatattggttaagcattcaaaacaaataaattttagtgaaaaagttatgtaatcgctacttgatcaaaagtaacattttatatttt 17345875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 19659725 - 19659665
Alignment:
Q  385 gttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaa 445  Q
    ||||| |||| |||| |||||||||| ||| ||||||||||||||| |||| |||||||||    
T  19659725 gttaaacatctaaaataagtaagtttttataaaaaagttgtgtaatcattagttgatcaaa 19659665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 33121411 - 33121343
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||| |||||| |||  |||||||||||||||||| ||| |||||| |||| |||||||||| ||||||    
T  33121411 aaaataagtaaattttcatgaaaaagttgtgtaatcattgtttgataaaaaataacatcttatattttc 33121343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 17835092 - 17835010
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||| ||| ||||||||| ||||||  |||||||| | || |||| |||| || ||||||||||| |||||| ||||    
T  17835092 cattggttaaacattcaaaacaagcaagttttcatgaaaaaatcgtataattattacttaatcaaaagtaatatcttatattt 17835010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 6770830 - 6770899
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatat-gaaaaagttgtgtaataattatttgatcaaaagt 448  Q
    ||||||||||||| ||||||||||| | ||| |||  |||||||| |||||| ||||||| |||||||||    
T  6770830 cattggttaagcaaccaaaacaagtcactttttataaaaaaagttatgtaattattatttaatcaaaagt 6770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 1e-23; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 464
Target Start/End: Complemental strand, 13738519 - 13738427
Alignment:
Q  372 cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||| || |||| ||||||||||||| ||||||    
T  13738519 cctaaggatattggttaagcatccaaaacaagtaagtttttataaaaaaattgtgtaatcattactttatcagaagtaacatcttatattttc 13738427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 380 - 480
Target Start/End: Original strand, 23453341 - 23453444
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatg-aaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttct 476  Q
    ||||||||||| |||||||||||| |||||| |||| |||||||||||||||  ||||||||||||||||||||||||| ||||||  |||||||||| |    
T  23453341 cattggttaagtatccaaaacaagcaagtttttatggaaaaagttgtgtaatctttatttgatcaaaagtaacatcttatattttcaagacaaaattttt 23453440  T
Q  477 attt 480  Q
    ||||    
T  23453441 attt 23453444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 383 - 457
Target Start/End: Original strand, 41436325 - 41436399
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctta 457  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||| ||||||||||    
T  41436325 tggttaagcatccaaaacaagtaagttttcatgaaaaagttgtgtaatcattattttatcaaaaataacatctta 41436399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 385 - 478
Target Start/End: Original strand, 40346710 - 40346805
Alignment:
Q  385 gttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctat 478  Q
    |||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||   |||||||||||||    
T  40346710 gttaagtatccaaaataagtaagtttttatgaaaaagttgtgcaatcattatttgatcaaaaataacatcttatattttcaatacaaaatttctat 40346805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 354 - 446
Target Start/End: Complemental strand, 42552104 - 42552012
Alignment:
Q  354 ggagaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    |||||||||||||||||||| || |||||||||||| ||| |||||||||||||||| |||||||||| |||| |||  ||||||||| ||||    
T  42552104 ggagaatgctaaccagtgcccaatgacattggttaaacatacaaaacaagtaagtttttatgaaaaagatgtgcaatcgttatttgataaaaa 42552012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 4978869 - 4978767
Alignment:
Q  379 acattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttct 476  Q
    ||||||||||| ||||||||| || ||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||| ||||||  ||||||| ||||    
T  4978869 acattggttaaacatccaaaataaataagtttttataaaaatgttgtgtaatcattacttgatcaaaagtaacatcttatattttcaagacaaaacttct 4978770  T
Q  477 att 479  Q
    |||    
T  4978769 att 4978767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 4996777 - 4996675
Alignment:
Q  379 acattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttct 476  Q
    ||||||||||| ||||||||| || ||||||| ||| |||| |||||||||| |||| ||||||||||||||||||||| ||||||  ||||||| ||||    
T  4996777 acattggttaaacatccaaaataaataagtttttataaaaatgttgtgtaatcattacttgatcaaaagtaacatcttatattttcaagacaaaacttct 4996678  T
Q  477 att 479  Q
    |||    
T  4996677 att 4996675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 462
Target Start/End: Original strand, 8580481 - 8580591
Alignment:
Q  353 tggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaac 451  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||  |||| |||||  ||||||||  ||| |||| |||| || ||||||||||||    
T  8580481 tggagaatgctaaccagtgccctaagggcattggttaagcatccaaagtaagttagttttcatgaaaaatgtgtctaattattacttaatcaaaagtaac 8580580  T
Q  452 atcttacattt 462  Q
    |||||| ||||    
T  8580581 atcttatattt 8580591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 354 - 463
Target Start/End: Original strand, 18717820 - 18717930
Alignment:
Q  354 ggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||| |||| || || || ||| ||||||||||||||||||  || |||  |||||||||||||||||| |||| ||||||||||||||||    
T  18717820 ggagaatgctaacaagtgtcccaaagatattagttaagcatccaaaacaaacaaattttcatgaaaaagttgtgtaatcattacttgatcaaaagtaaca 18717919  T
Q  453 tcttacatttt 463  Q
    ||||| |||||    
T  18717920 tcttatatttt 18717930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 354 - 480
Target Start/End: Complemental strand, 40574286 - 40574157
Alignment:
Q  354 ggagaatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    ||||||||||||||||||||  |||| || |||||||||||||||||||||||  |||  |||||||||||||||||| |||| |  ||||||||| |||    
T  40574286 ggagaatgctaaccagtgccccaagggcaatggttaagcatccaaaacaagtacattttcatgaaaaagttgtgtaattattactctatcaaaagttaca 40574187  T
Q  453 tcttacattttc--gacaaaatttctattt 480  Q
    | ||| |||| |  ||||||||||||||||    
T  40574186 ttttatatttccaagacaaaatttctattt 40574157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 430
Target Start/End: Original strand, 42251581 - 42251654
Alignment:
Q  358 aatgctaaccagtgcct-aaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaat 430  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42251581 aatgctaactagtgtctcaagggcattggttaagcatccaaaacaagtaagtttacatgaaaaagttgtgtaat 42251654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 480
Target Start/End: Complemental strand, 1004919 - 1004789
Alignment:
Q  352 atggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    ||||||||||||||| |||| || || | || |||||||| ||| |||||||  |||||| ||||||||||||||||||| || |||| |||||||||||    
T  1004919 atggagaatgctaactagtgtcccaaaggcaatggttaaggatctaaaacaaaaaagtttttatgaaaaagttgtgtaatcataattt-atcaaaagtaa 1004821  T
Q  451 catcttacattttc--gacaaaatttctattt 480  Q
     || ||| ||||||  ||||||||||||||||    
T  1004820 tattttatattttcaagacaaaatttctattt 1004789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 354 - 457
Target Start/End: Complemental strand, 43080448 - 43080345
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||| ||||||||||| | |||| ||||||||||||||||||||||  || ||| ||||||||| ||||||||| || ||| | ||||||||||||    
T  43080448 ggagaatgttaaccagtgccctgaggatattggttaagcatccaaaacaatcaaatttttatgaaaaaattgtgtaatcataattag-tcaaaagtaaca 43080350  T
Q  453 tctta 457  Q
    |||||    
T  43080349 tctta 43080345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 357 - 464
Target Start/End: Complemental strand, 5525424 - 5525317
Alignment:
Q  357 gaatgctaaccagtgcctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctt 456  Q
    |||||||||| |||| |||| | ||||||||||||| | |||| |||||||||| ||  ||||||| || |||| |||||||| ||||| ||||||||||    
T  5525424 gaatgctaactagtgtctaaaggcattggttaagcaactaaaataagtaagtttttaataaaaagtagtataatcattatttggtcaaatgtaacatctt 5525325  T
Q  457 acattttc 464  Q
    || |||||    
T  5525324 acgttttc 5525317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 480
Target Start/End: Original strand, 4557534 - 4557671
Alignment:
Q  347 atttaatggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatg-aaaaagttgtgtaataattatttgatcaa 444  Q
    |||||| | ||||| |||||||||||| ||||| || ||||||||||||||| | |||||||||| |||| ||||||||| |||||||||| |  |||||    
T  4557534 atttaaagaagaatactaaccagtgccctaagggcaatggttaagcatccaagataagtaagtttttatgaaaaaagttgagtaataattactcaatcaa 4557633  T
Q  445 aagtaacatcttacattttc--gacaaaatttctattt 480  Q
    || |||| ||||| |||| |  || |||||||||||||    
T  4557634 aaataacttcttatatttccaagataaaatttctattt 4557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 6315858 - 6315968
Alignment:
Q  355 gagaatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacat 453  Q
    ||||||| |||||||||| | |||  |||||||||| |||||||||||| ||| ||| | | ||||| ||||||||| |||| |||||||||| ||||||    
T  6315858 gagaatgataaccagtgctccaagagcattggttaaacatccaaaacaaataaatttttgtaaaaaaattgtgtaatcattacttgatcaaaaataacat 6315957  T
Q  454 cttacattttc 464  Q
    |||| ||||||    
T  6315958 cttatattttc 6315968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 3689770 - 3689653
Alignment:
Q  344 attatttaatggagaatgctaaccagtg-cctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatc 442  Q
    ||||||| | |||||||||||||||||| || |||| ||||||||||||| |||||||||| |   || ||||| |||||| |||||| ||||   ||||    
T  3689770 attattttaaggagaatgctaaccagtgccccaagggcattggttaagcagccaaaacaagcacaattttatgataaagttatgtaatcatta--cgatc 3689673  T
Q  443 aaaagtaacatcttacattt 462  Q
    ||||||||||||||| ||||    
T  3689672 aaaagtaacatcttatattt 3689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 382 - 446
Target Start/End: Complemental strand, 28331368 - 28331304
Alignment:
Q  382 ttggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaa 446  Q
    |||||||||||| ||||| |||||||||| ||||||| ||||||||||| |||| ||||||||||    
T  28331368 ttggttaagcattcaaaataagtaagtttttatgaaagagttgtgtaatcattacttgatcaaaa 28331304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 481
Target Start/End: Original strand, 14952998 - 14953124
Alignment:
Q  358 aatgctaaccagtgc-ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatctt 456  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||| |||||| ||| ||  ||||| |||| |||| |||| | |||||||| |||||| ||    
T  14952998 aatgctaacaagtgctctaagaatattggttaagcatccaaaataagtaaatttgtaaaaaaaaattgtctaatcattactcgatcaaaaataacatttt 14953097  T
Q  457 acatttt--cgacaaaatttctatttc 481  Q
    | |||||   |||||||||| ||||||    
T  14953098 atatttttaagacaaaatttttatttc 14953124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 43131875 - 43131792
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    ||||| |||| || ||||||||||||||||| ||| |||| || ||||||| |||| |||||||||||||  | ||||||||||    
T  43131875 cattgattaaacaaccaaaacaagtaagtttttataaaaaggtagtgtaattattacttgatcaaaagtataaacttacatttt 43131792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 464
Target Start/End: Complemental strand, 43681386 - 43681303
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||| | ||| ||||||||  |||||| |||||||||||||| |||| |||||||| | |||| |||||||||| ||||||    
T  43681386 attggtttaccattcaaaacaaacaagtttttatgaaaaagttgtataatcattatttggtaaaaaataacatcttatattttc 43681303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 38024298 - 38024214
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||||| ||||| |||||||||||||   ||||  ||||||||||| |||||| ||||||||||| ||||||| |||||| |||||    
T  38024298 gacatttgttaaacatccaaaacaagcccgttttaatgaaaaagttatgtaattattatttgatc-aaagtaatatcttatatttt 38024214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 6462701 - 6462637
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaa 450  Q
    |||||||| |||||||| |||||||  || |||||||||| |||| ||||||| |||||||||||    
T  6462701 ttaagcattcaaaacaaataagttttaataaaaaagttgtataattattattttatcaaaagtaa 6462637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 477
Target Start/End: Original strand, 9021470 - 9021569
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttcta 477  Q
    ||||||||||| |||||||| ||| ||||||  |  ||||| | ||||||| |||||||  |||||| ||||||||||||||| |  |||||||||||||    
T  9021470 cattggttaagtatccaaaataagaaagttttcacaaaaaaatagtgtaatcattatttagtcaaaaataacatcttacatttccaagacaaaatttcta 9021569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 13717178 - 13717276
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||| |||| ||||||||||  || |||||||| |||||| |||| || || |||| |||||| ||| ||||||  ||||||||||||||||    
T  13717178 tggttaagcatctaaaataagtaagttttcatcaaaaagttatgtaattattactt-attaaaaataacattttatattttcaagacaaaatttctattt 13717276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 462
Target Start/End: Complemental strand, 33609292 - 33609208
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||||||   |||| || ||||||| ||  ||||| | ||||| | |||||||||||||| ||||||||||||||||    
T  33609292 gacattggttaagcaattaaaataaataagtttttaataaaaaatagtgtacttattatttgatcaaatgtaacatcttacattt 33609208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 27896463 - 27896542
Alignment:
Q  383 tggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||| || |||||| ||||||||||  || ||||||||||||||| |||| |  ||||||||||||| |||| ||||    
T  27896463 tggttaaacaaccaaaataagtaagttttaattaaaaagttgtgtaattattactaaatcaaaagtaacagcttatattt 27896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 480
Target Start/End: Complemental strand, 1870636 - 1870508
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaaca 452  Q
    |||||||||||| ||||||| |  || ||||||||||||| | ||||||||||| ||| ||| |||||  |||||||| |||| || ||||||||| | |    
T  1870636 ggagaatgctaaacagtgccctcggggcattggttaagcaacaaaaacaagtaactttttat-aaaaaaatgtgtaattattacttaatcaaaagtcaaa 1870538  T
Q  453 tcttacattttc--gacaaaatttctattt 480  Q
     |||| ||||||  |||||| |||||||||    
T  1870537 gcttatattttcaagacaaattttctattt 1870508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 396 - 462
Target Start/End: Complemental strand, 7932991 - 7932925
Alignment:
Q  396 aaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||| |||||||||| || |||||||||||| ||| |||| || ||| ||||||| |||||||||||    
T  7932991 aaaataagtaagtttttacgaaaaagttgtgcaatcattactttatccaaagtaaaatcttacattt 7932925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 480
Target Start/End: Complemental strand, 32909518 - 32909419
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaa---gttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctattt 480  Q
    |||||||||||||| || ||||||| ||| |||||   ||| ||||||||||| || ||||||||||| |||||| |||| |  |||||||||| |||||    
T  32909518 ttaagcatccaaaataaataagtttttattaaaaaaatgttatgtaataattactttatcaaaagtaatatcttatatttccaagacaaaatttatattt 32909419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 422
Target Start/End: Original strand, 36087364 - 36087405
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagt 422  Q
    |||| |||||||| |||||||||||||||| |||||||||||    
T  36087364 attgattaagcattcaaaacaagtaagtttttatgaaaaagt 36087405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 17641177 - 17641253
Alignment:
Q  386 ttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    ||||||||| |||| ||||||||||  ||  |||||||||| |||||||  || |||||||||||||| ||| ||||    
T  17641177 ttaagcatctaaaataagtaagttttcattgaaaagttgtgcaataatttctttatcaaaagtaacattttatattt 17641253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 463
Target Start/End: Complemental strand, 38193804 - 38193712
Alignment:
Q  372 cctaaggacattggttaagcatccaaaacaagtaagtttatatg-aaaaagttgtgtaataattatttgatcaaaagtaacatcttacatttt 463  Q
    |||| ||||||||||||||||   || |||  ||||||| |||| ||||||| ||||||| ||||||| ||||||| ||| | ||||||||||    
T  38193804 cctagggacattggttaagcaattaatacagttaagtttttatgaaaaaagtagtgtaattattatttcatcaaaaataaaaacttacatttt 38193712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 464
Target Start/End: Complemental strand, 30103 - 30019
Alignment:
Q  380 cattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||| ||  |||||||||||||||| ||||||||  ||||||||| ||||||| || ||||||||||||||| ||||||    
T  30103 cattggttaaacactcaaaacaagtaagtttttatgaaaagtttgtgtaattattatttaattaaaagtaacatcttatattttc 30019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 381 - 480
Target Start/End: Complemental strand, 15481 - 15380
Alignment:
Q  381 attggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaaatttctat 478  Q
    ||||||||| ||| ||||| |||||||||| |||||||||  ||| ||||  ||| ||| ||||||||||||||||| ||||||  ||||||| ||||||    
T  15481 attggttaaacattcaaaataagtaagtttttatgaaaaatgtgtataatcgttacttggtcaaaagtaacatcttatattttcaagacaaaaattctat 15382  T
Q  479 tt 480  Q
    ||    
T  15381 tt 15380  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 480
Target Start/End: Original strand, 120659 - 120768
Alignment:
Q  373 ctaaggacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc--gacaaa 470  Q
    ||||||| | ||||||| ||||||||| |||||||||| | || |||||||||| |||  ||| || | ||||||| |||||||| ||||||  ||||||    
T  120659 ctaaggataatggttaaacatccaaaataagtaagtttttgtggaaaagttgtgcaatcgttactttaccaaaagtgacatcttatattttcaagacaaa 120758  T
Q  471 atttctattt 480  Q
    ||||||||||    
T  120759 atttctattt 120768  T

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Target: scaffold0299 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 448
Target Start/End: Complemental strand, 18160 - 18064
Alignment:
Q  354 ggagaatgctaaccagtgcc-taaggacattggttaagcatccaaaacaagtaagtttatat-gaaaaagttgtgtaataattatttgatcaaaagt 448  Q
    |||||||||||| |||| || | ||| ||||||||||||| ||||||||||||| ||| |||  ||||||||||||||| |||| || |||||||||    
T  18160 ggagaatgctaaacagtaccgtcagggcattggttaagcaaccaaaacaagtaactttttataaaaaaagttgtgtaattattacttaatcaaaagt 18064  T

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Target: scaffold0079 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 462
Target Start/End: Original strand, 51641 - 51725
Alignment:
Q  378 gacattggttaagcatccaaaacaagtaagtttatatgaaaaagttgtgtaataattatttgatcaaaagtaacatcttacattt 462  Q
    |||||||||||| ||||||||| || ||| ||| ||||||||| || |||||| |||| || |||||||||||||| ||| ||||    
T  51641 gacattggttaaacatccaaaataaataaatttttatgaaaaaattatgtaatcattacttaatcaaaagtaacattttatattt 51725  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 464
Target Start/End: Original strand, 36565 - 36613
Alignment:
Q  416 aaaaagttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    |||||||||| |||| ||||||| |||||||||||||||||| ||||||    
T  36565 aaaaagttgtataatcattatttaatcaaaagtaacatcttatattttc 36613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0329 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 464
Target Start/End: Original strand, 7398 - 7440
Alignment:
Q  422 ttgtgtaataattatttgatcaaaagtaacatcttacattttc 464  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||    
T  7398 ttgtgtaatcattatttgatcaaaagtaatatcttatattttc 7440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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