View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13947_high_10 (Length: 301)

Name: NF13947_high_10
Description: NF13947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13947_high_10
NF13947_high_10
[»] chr8 (9 HSPs)
chr8 (11-282)||(10683255-10683526)
chr8 (63-171)||(44912966-44913074)
chr8 (33-171)||(43811260-43811398)
chr8 (33-171)||(201461-201599)
chr8 (33-171)||(316298-316436)
chr8 (33-171)||(30409580-30409718)
chr8 (33-120)||(28647153-28647240)
chr8 (33-171)||(1287569-1287707)
chr8 (33-120)||(41946058-41946145)
[»] chr5 (9 HSPs)
chr5 (47-252)||(16598070-16598275)
chr5 (33-171)||(12019531-12019669)
chr5 (33-171)||(37659469-37659607)
chr5 (33-120)||(10275279-10275366)
chr5 (33-171)||(7103151-7103289)
chr5 (33-171)||(16794911-16795049)
chr5 (35-252)||(30048062-30048276)
chr5 (68-171)||(40371024-40371127)
chr5 (33-171)||(30696038-30696176)
[»] chr3 (6 HSPs)
chr3 (33-171)||(43548457-43548595)
chr3 (53-171)||(22931084-22931202)
chr3 (33-171)||(54171121-54171259)
chr3 (33-120)||(21847870-21847957)
chr3 (33-171)||(756564-756702)
chr3 (33-171)||(9698323-9698461)
[»] scaffold0027 (1 HSPs)
scaffold0027 (39-272)||(54093-54325)
[»] scaffold0044 (1 HSPs)
scaffold0044 (33-171)||(48642-48780)
[»] chr7 (3 HSPs)
chr7 (33-171)||(7943860-7943998)
chr7 (36-276)||(730353-730593)
chr7 (33-171)||(27757639-27757777)
[»] chr6 (4 HSPs)
chr6 (33-171)||(8319281-8319419)
chr6 (33-125)||(17160335-17160427)
chr6 (33-171)||(17881256-17881394)
chr6 (33-117)||(27571563-27571647)
[»] chr4 (5 HSPs)
chr4 (33-171)||(44147800-44147938)
chr4 (33-118)||(31355421-31355506)
chr4 (35-276)||(20290246-20290487)
chr4 (33-120)||(43683007-43683094)
chr4 (33-171)||(27186881-27187019)
[»] chr2 (4 HSPs)
chr2 (33-171)||(8051634-8051772)
chr2 (33-171)||(36671293-36671431)
chr2 (33-118)||(13270358-13270443)
chr2 (51-120)||(35953920-35953989)
[»] chr1 (2 HSPs)
chr1 (33-171)||(39794637-39794775)
chr1 (33-171)||(26312255-26312393)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-146)||(64579-64692)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 11 - 282
Target Start/End: Complemental strand, 10683526 - 10683255
Alignment:
Q  11 gaagcataggatatactagaagagtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatgg 110  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10683526 gaagcatgggatatactagaagagtatcgtgaaggtgatgaaaaggtgaagcagatcaagcttcagtctctaagaaggaaatttaaactgatgcagatgg 10683427  T
Q  111 aagatgatcaaaaaattgttgattacatatccaaactgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgttta 210  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10683426 aagatgataaaaaaattgttgattacatatccaaactgattaatattttcaatcagatgaagacatgcagttaaacaatttcagattaacatattgttta 10683327  T
Q  211 gaagatcatgtgaactctatccccaagatttgatttcatagttatggctatttaagaatcaaaggacatgaa 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10683326 gaagatcatgtgaactctatccccaagatttgatttcatagttatggctatttaagaatcaaaggacatgaa 10683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 44913074 - 44912966
Alignment:
Q  63 agatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgattacatatccaaactgattaatattttcaa 162  Q
    |||| |||||||||||| ||||||| || |||||| ||||||| ||||||||||| ||||| |||||||||||||| |||||||||| |||| || | ||    
T  44913074 agataaagcttcagtctttaagaagaaagtttgaaatgatgcaaatggaagatgagcaaaagattgttgattacatctccaaactgaataatgttgtaaa 44912975  T
Q  163 tcagatgaa 171  Q
    |||||||||    
T  44912974 tcagatgaa 44912966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 43811398 - 43811260
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| || |||  |||    
T  43811398 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaagatttctga 43811299  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| |||||| || | |||||||||||    
T  43811298 atacatctctaaactcattaatcttgtgaatcagatgaa 43811260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 201599 - 201461
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  201599 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 201500  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  201499 gtacatctctaaactcatcaatcttgtgaatcagatgaa 201461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 316436 - 316298
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  316436 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 316337  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  316336 gtacatctctaaactcatcaatcttgtgaatcagatgaa 316298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 30409718 - 30409580
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  30409718 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 30409619  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  30409618 gtacatctctaaactcatcaatcttgtgaatcagatgaa 30409580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 28647153 - 28647240
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    ||||||||||| ||||||| || || ||   ||| |||||||| |  |||||||||||||||||||||||||| ||||||||||||||    
T  28647153 agtatcatgaaggtgatgataaagtgaaattgattaagcttcaataactaagaaggaaatttgaactgatgcaaatggaagatgatca 28647240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 1287569 - 1287707
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| ||||| ||   ||| |||||||| || || |||| ||||||||| |||||| |||||||||||||||| || |||  |||    
T  1287569 agtatcatgaaggtgatgataaggtgaaatcgattaagcttcaatcactgagaaagaaatttgagctgatgtagatggaagatgatcagaagatttctga 1287668  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  1287669 atacatctctaaactcatcaatcttgtgaatcagatgaa 1287707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 41946058 - 41946145
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| || ||| | ||||||||||| |||||| ||||||||||||||||    
T  41946058 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactacggaggaaatttgagctgatgtagatggaagatgatca 41946145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 252
Target Start/End: Complemental strand, 16598275 - 16598070
Alignment:
Q  47 gatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgattacatatccaaac 146  Q
    ||||||||||| ||| |||| |||||||| ||| || ||||||||||||||  | |||| ||||||||||| || || |||||||||||||| || ||      
T  16598275 gatgaaaaggtgaagtagataaagcttcactctttatgaaggaaatttgaatagttgcaaatggaagatgagcagaagattgttgattacatctctaaga 16598176  T
Q  147 tgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgtttagaagatcatgtgaactctatccccaagatttgattt 246  Q
    |||||||| ||   |||| ||||||  |||| ||| |||| |||||||||  ||| |||||| ||||||||||| |||||||||| | ||| ||||||||    
T  16598175 tgattaatgttgaaaatcggatgaaggcatggagtgaaactatttcagatccacaaattgttgagaagatcatgagaactctatctctaaggtttgattt 16598076  T
Q  247 catagt 252  Q
    ||||||    
T  16598075 catagt 16598070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 12019531 - 12019669
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| || |||  |||    
T  12019531 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaagatttctga 12019630  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| |||||| || | |||||||||||    
T  12019631 atacatctctaaactcattaatcttgtgaatcagatgaa 12019669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 37659469 - 37659607
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| || |||  |||    
T  37659469 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgaattgatgcaaatggaagatgatcagaagatttctga 37659568  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| |||||| || | |||||||||||    
T  37659569 atacatctctaaactcattaatcttgtgaatcagatgaa 37659607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 10275279 - 10275366
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  10275279 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactaagaaggaaatttgagctgatgcagatggaagatgatca 10275366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 7103289 - 7103151
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  7103289 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 7103190  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  7103189 gtacatctctaaactcatcaatcttgtgaatcagatgaa 7103151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 16794911 - 16795049
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  16794911 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 16795010  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  16795011 gtacatctctaaactcatcaatcttgtgaatcagatgaa 16795049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 252
Target Start/End: Original strand, 30048062 - 30048276
Alignment:
Q  35 tatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgatt 134  Q
    ||||||||| | ||||| ||||| ||| |||| ||||||| |||| |||||||||||||| |  ||||||| |||||||| || ||||| ||| ||||||    
T  30048062 tatcatgaaggagatgagaaggtgaaggagataaagcttcggtctttaagaaggaaatttaagttgatgcaaatggaagaggagcaaaagattcttgatt 30048161  T
Q  135 acatatccaaactgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgtttagaagatcatgtgaactctatcccc 234  Q
    |||| |  ||  |||||||| || |    || |||||  |||||||| ||||||| || |||||||| ||| || ||| ||||||  |||| ||||| ||    
T  30048162 acatctttaagttgattaatgttgt---acaaatgaaggcatgcagtgaaacaatctctgattaacaaattattgagacgatcataagaacactatctcc 30048258  T
Q  235 aagatttgatttcatagt 252  Q
    ||||||| |||| |||||    
T  30048259 aagattttattttatagt 30048276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 40371127 - 40371024
Alignment:
Q  68 aagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgattacatatccaaactgattaatattttcaatcaga 167  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || |||  ||| ||||| || ||||| || ||| || | |||||||    
T  40371127 aagcttcagtcactgagaaggaaatttgaactgatgcaaatggaagatgatcagaagatttctgaatacatctctaaactcatcaatcttgtgaatcaga 40371028  T
Q  168 tgaa 171  Q
    ||||    
T  40371027 tgaa 40371024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 30696038 - 30696176
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    |||| |||||| ||||||| || || |||  ||| |||||||| || || |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  30696038 agtaccatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 30696137  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  30696138 gtacatctctaaactcatcaatcttgtgaatcagatgaa 30696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 43548457 - 43548595
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || ||   ||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| |||  |||    
T  43548457 agtatcatgaaggtgatgataaagtgaaattgattaagcttcaatcactaagaaggaaatttgagctgatgcagatggaagatgatcaaaagatttctga 43548556  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     |||||||| ||||| || ||| || | |||||||||||    
T  43548557 atacatatctaaactcatcaatcttgtgaatcagatgaa 43548595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 22931202 - 22931084
Alignment:
Q  53 aaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgattacatatccaaactgatta 152  Q
    ||||| |||||||| ||||||||||   ||||||||||||||||  ||||||| |||||||||||  |||| |||||||||||||| ||||  |||||||    
T  22931202 aaggtgaagcagataaagcttcagttattaagaaggaaatttgagttgatgcaaatggaagatgagaaaaagattgttgattacatctccatgctgatta 22931103  T
Q  153 atattttcaatcagatgaa 171  Q
    || || | |||||||||||    
T  22931102 atgttgtaaatcagatgaa 22931084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 54171259 - 54171121
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| |||  |||    
T  54171259 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcaaaagatttctga 54171160  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  54171159 gtacatctctaaactcatcaatcttgtgaatcagatgaa 54171121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 21847870 - 21847957
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  21847870 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatca 21847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 756564 - 756702
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || ||   ||| |||||||| || || || || |||||||| |||||||||||||||| |||||| || |||  |||    
T  756564 agtatcatgaaggtgatgataaagtgaaattgattaagcttcaatcactgaggagtaaatttgagctgatgcagatggaagttgatcacaagatttctga 756663  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| |||||||| || ||| || | |||||||||||    
T  756664 atacatctccaaactcatcaatcttgtgaatcagatgaa 756702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 9698323 - 9698461
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||| ||| || || |||  ||| |||||||| || || |||||||||||||| ||| |||| |||||||||||||| || |||  |||    
T  9698323 agtatcatgaaggtggtgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctggtgcaaatggaagatgatcagaagatttctga 9698422  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  9698423 atacatctctaaactcatcaatcttgtgaatcagatgaa 9698461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 272
Target Start/End: Complemental strand, 54325 - 54093
Alignment:
Q  39 atgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgattacat 138  Q
    ||||| ||||||||||||| ||||||||||||||||| ||| | || ||||||||| |||||||  | ||||||||  |||| || ||||||||||||||    
T  54325 atgaaggtgatgaaaaggtgaagcagatcaagcttcaatctttgaggaggaaatttcaactgatataaatggaagaatatcataagattgttgattacat 54226  T
Q  139 atccaaactgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgtttagaagatcatgtgaactctatccccaaga 238  Q
     | |||| |||| || ||| | ||||||| |||  |||| |||   |||||||  ||| |||| |||||| | ||||| ||| |||| ||||| ||||||    
T  54225 ct-caaagtgatcaacattgtgaatcagaggaaggcatggagtgggacaatttatgatcaacaaattgttgaaaagataatgagaaccctatcaccaaga 54127  T
Q  239 tttgatttcatagttatggctatttaagaatcaa 272  Q
    ||| | ||||||||| | || ||| |||||||||    
T  54126 tttaacttcatagttgtagcaattcaagaatcaa 54093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 48780 - 48642
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  48780 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 48681  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  48680 gtacatctctaaactcatcaatcttgtgaatcagatgaa 48642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 7943998 - 7943860
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  7943998 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 7943899  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  7943898 gtacatctctaaactcatcaatcttgtgaatcagatgaa 7943860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 276
Target Start/End: Original strand, 730353 - 730593
Alignment:
Q  36 atcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgatta 135  Q
    |||||||| | ||||| ||||| |||  ||| |||||||||||| | |||||||| |||||| ||||||||||||| || || ||||| |||| ||| ||    
T  730353 atcatgaaggcgatgataaggtgaagttgattaagcttcagtctttgagaaggaagtttgaattgatgcagatggaggaagagcaaaatattgctgaata 730452  T
Q  136 catatccaaactgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgtttagaagatcatgtgaactctatcccca 235  Q
     || |||||||| || |||||| | |||||||||||  | ||  |  || ||||  | ||| |||| |||||| |||| || ||| |||| |||||  ||    
T  730453 tatctccaaactcatcaatattgtgaatcagatgaaggcttgtggagaagcaatgactgatcaacaaattgttgagaaaatgatgagaacactatcatca 730552  T
Q  236 agatttgatttcatagttatggctatttaagaatcaaagga 276  Q
    ||||||||||| |||||  | || ||| |||||||||||||    
T  730553 agatttgattttatagtggttgcaattcaagaatcaaagga 730593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 27757639 - 27757777
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| || ||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  27757639 agtatcatgaaggtgatgataaagtgaagttgattaaacttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 27757738  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  27757739 gtacatctctaaactcatcaatcttgtgaatcagatgaa 27757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 8319419 - 8319281
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  8319419 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 8319320  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  8319319 gtacatctctaaactcatcaatcttgtgaatcagatgaa 8319281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 17160335 - 17160427
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaa 125  Q
    |||| |||||| ||||||| || || |||  ||| |||||||| || || || ||||||||||| ||||||||||||||||||||| ||||||    
T  17160335 agtaccatgaaggtgatgataaagtgaagttgattaagcttcaatcactgaggaggaaatttgagctgatgcagatggaagatgataaaaaaa 17160427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Complemental strand, 17881394 - 17881256
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| || || |||||||||||||| ||  |||| |||||||||||||| || |||  |||    
T  17881394 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctattgcaaatggaagatgatcataagatttatga 17881295  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  17881294 atacatctctaaactcatcaatcttgtgaatcagatgaa 17881256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 27571647 - 27571563
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatga 117  Q
    ||||||||||| ||||||| || || ||   ||| |||||||| || || |||||||| |||||||||||||| |||||||||||    
T  27571647 agtatcatgaaggtgatgataaagtgaaattgattaagcttcaatcactgagaaggaagtttgaactgatgcaaatggaagatga 27571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 44147800 - 44147938
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  44147800 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 44147899  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  44147900 gtacatctctaaactcatcaatcttgtgaatcagatgaa 44147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 31355421 - 31355506
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgat 118  Q
    ||||||||||| ||||||| || || |||  ||| || |||||||| || |||||||||||||| |||||||||||||||||||||    
T  31355421 agtatcatgaaggtgatgataaagtgaagatgattaaacttcagtcactgagaaggaaatttgagctgatgcagatggaagatgat 31355506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 276
Target Start/End: Original strand, 20290246 - 20290487
Alignment:
Q  35 tatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttgatt 134  Q
    ||||||||| ||||||| |||||  ||||||| |||||||||||  | |||||||| ||| || ||||||| ||||| |||||  | || |||| |||||    
T  20290246 tatcatgaaggtgatgataaggtggagcagataaagcttcagtcattgagaaggaagtttaaattgatgcaaatggaggatgagaagaagattgctgatt 20290345  T
Q  135 acatatccaaactgattaatattttcaatcagatgaacacatgcagttaaacaatttcagattaacatattgtttagaagatcatgtgaactctatcccc 234  Q
    |||| |||||||| || ||| || | |||||||| ||  | |   |  ||  | || ||||| |||| |||||| |||| |||||| |||| ||||| ||    
T  20290346 acatctccaaactaatcaatgttgtaaatcagataaaagcttatggagaagtagttacagatcaacaaattgttgagaaaatcatgagaacactatctcc 20290445  T
Q  235 aagatttgatttcatagttatggctatttaagaatcaaagga 276  Q
    |||||||||||| |||||  | || ||| | |||||||||||    
T  20290446 aagatttgattttatagtggttgcaattcatgaatcaaagga 20290487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 43683094 - 43683007
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    ||||||||||| ||||||| || || |||  ||| || ||||| || || |||||||||||||||||||| || ||||||||||||||    
T  43683094 agtatcatgaaggtgatgataaagtgaagttgattaaacttcaatcactgagaaggaaatttgaactgatacaaatggaagatgatca 43683007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 27186881 - 27187019
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||| ||| || || |||  ||| |||||||| || || |||||||||||||| ||| |||| |||||||||||||| || |||  |||    
T  27186881 agtatcatgaaggtggtgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctggtgcaaatggaagatgatcagaagatttctga 27186980  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  27186981 atacatctctaaactcatcaatcttgtgaatcagatgaa 27187019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 8051634 - 8051772
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  8051634 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 8051733  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  8051734 gtacatctctaaactcatcaatcttgtgaatcagatgaa 8051772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 36671293 - 36671431
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  36671293 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 36671392  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  36671393 gtacatctctaaactcatcaatcttgtgaatcagatgaa 36671431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 13270443 - 13270358
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgat 118  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| || || |||||||||||||| |||||||| ||||||||||||    
T  13270443 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgat 13270358  T

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Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 35953989 - 35953920
Alignment:
Q  51 aaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatca 120  Q
    |||| ||||||  ||| |||||||| || || |||||||||||||| |||||||| ||||||||||||||    
T  35953989 aaaaagtaaagttgattaagcttcaatcactgagaaggaaatttgagctgatgcaaatggaagatgatca 35953920  T

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Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 39794637 - 39794775
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  39794637 agtatcatgaaggtgatgataaagtgaagttgattaagcttcaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 39794736  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  39794737 gtacatctctaaactcatcaatcttgtgaatcagatgaa 39794775  T

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Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 26312255 - 26312393
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| || || |||  ||| ||||| || ||||| |||||||||||||| |||||||| |||||||||||||| || |||  |||    
T  26312255 agtatcatgaaggtgatgataaagtgaagttgattaagctccaatctctgagaaggaaatttgagctgatgcaaatggaagatgatcagaagatttctga 26312354  T
Q  133 ttacatatccaaactgattaatattttcaatcagatgaa 171  Q
     ||||| || ||||| || ||| || | |||||||||||    
T  26312355 gtacatctctaaactcatcaatcttgtgaatcagatgaa 26312393  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 64692 - 64579
Alignment:
Q  33 agtatcatgaatgtgatgaaaaggtaaagcagatcaagcttcagtctctaagaaggaaatttgaactgatgcagatggaagatgatcaaaaaattgttga 132  Q
    ||||||||||| ||||||| ||||| ||   ||| |||||||| || || || ||||||||||| ||||||||||||||||||||||| || |||  |||    
T  64692 agtatcatgaaggtgatgataaggtgaaattgattaagcttcaatcactgaggaggaaatttgagctgatgcagatggaagatgatcagaagatttctga 64593  T
Q  133 ttacatatccaaac 146  Q
     ||||| |||||||    
T  64592 atacatctccaaac 64579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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