View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13948_high_38 (Length: 208)
Name: NF13948_high_38
Description: NF13948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13948_high_38 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 18173672 - 18173845
Alignment:
| Q |
18 |
ggatttgaaccaaaatatgcataatatgagtcttgcaaaaaacataaataagttttctattattccaatcactattctttgtgtttgtcctcttgctgtt |
117 |
Q |
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| T |
18173672 |
ggatttgaaccaaaatatgcataatatgagtcttgcaaaaaacataaataagttttctattattgcaatcactattctttgtgtttgtcctcttgctgtt |
18173771 |
T |
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| Q |
118 |
cagctgcaaaggtagcaaagtatctattataatggtggtactttgggattttaatcgacgcattcacgcattca |
191 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
18173772 |
cagctgcaaaggtagcaaagtatctattctaatggtggtactttgggattttaattgacgcattcacgcattca |
18173845 |
T |
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