View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1394_low_33 (Length: 318)
Name: NF1394_low_33
Description: NF1394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1394_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 36843446 - 36843292
Alignment:
| Q |
76 |
atggatgatataatctttcacagcttttttaacttggacggtataatccaaattactttgttgaatgaactctgtggaaggggctgatattttcaacttc |
175 |
Q |
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| T |
36843446 |
atggatgatataatctttcacagcttttttaacttggacggtataatccaaattactttgttgaatgaactctgtggaaggggctgatattttcaacttc |
36843347 |
T |
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| Q |
176 |
tattcttctatacacattagttatagtaaatcaaacttatgaccacataattaag |
230 |
Q |
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| T |
36843346 |
tattcttctatacacattagttatagtaaatcaaacttatgaccacataattaag |
36843292 |
T |
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