View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13951_low_9 (Length: 293)
Name: NF13951_low_9
Description: NF13951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13951_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 276
Target Start/End: Complemental strand, 1443737 - 1443471
Alignment:
| Q |
10 |
attatacttcaaatcaagaattgaactccaagactatgtatcattacttgcaatccacattagcaaagtctcacatcaagaactttattgtgtacaacgc |
109 |
Q |
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| T |
1443737 |
attatacttcaaatcaagaattgaactccaagactatgtatcattacttgcaatccacattagcaaagtctcacatcaagaactttattgtgtacaacgc |
1443638 |
T |
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| Q |
110 |
ttatatactatatatatgatatgaattgaagtggataatttattcaaatccatcataataaggtgcaagaaaatatactcacccagtagagaaaattcaa |
209 |
Q |
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| T |
1443637 |
ttatatactatatatatgatatgaattgaagtggataatttattcaaatccatcataataaggtgcaagaaaatatactcacccagtagagaaaattcaa |
1443538 |
T |
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| Q |
210 |
gatgaaatcctttgtttacaacattttctttgtgttattttttaatctcttaaccaaaacccaagtt |
276 |
Q |
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| T |
1443537 |
gatgaaatcctttgtttacaacattttctttgtgttcttttttaatctcttaaccaaaatccaagtt |
1443471 |
T |
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