View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13954_low_9 (Length: 282)
Name: NF13954_low_9
Description: NF13954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13954_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 43015977 - 43015792
Alignment:
| Q |
42 |
ctttttgtgcaaaagcgtatacttaccaaccgaacgttgaaatttcatataattataaagttaataatgtatagctgctagtgaaacatcacgttcattt |
141 |
Q |
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| T |
43015977 |
ctttttgtgcaaaagcgtatacttaccaaccgaacgttgaaatttcatataattataaagttaataatgtatagctgctagtgaaacatcacgttcattt |
43015878 |
T |
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| Q |
142 |
ctttagaaattaacgtgcctatatatccatgttccaatcaaatgctatgctttattgaaatttaaattaccaataaaaattagagg |
227 |
Q |
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| T |
43015877 |
ctttagaaattaacgtgcctatacatccatgttccaatcaaatgctatgctttattgaaatttaaattaccaataaaaattagagg |
43015792 |
T |
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