View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13955_high_47 (Length: 313)
Name: NF13955_high_47
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13955_high_47 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 11381023 - 11381308
Alignment:
| Q |
12 |
agacacaaacactcttaatgaggaaaagaatgtgtaccagcacaccaggaggtgatgaatgacaaagattctcctctttaatactagacaggtaactcat |
111 |
Q |
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| T |
11381023 |
agacacaaatactcttaatgaggaaaagaatgtgtaccagcacaccaggaggtgatgaatgacaaagattctcctctttaatactagacaggtaactcat |
11381122 |
T |
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| Q |
112 |
tttcaagtccaacaaactctcattgccatcactagtcaaatttggggtcaatgctgtttcaaacgatgaaaatcgttctgaagaagaaacagatgatgcc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11381123 |
tttcaagtccaacaaactctcattgccatcactagtcaaatttggggtcaataccgtttcaaacgatgaaaatcgttctgaagaagaaacagatgatgcc |
11381222 |
T |
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| Q |
212 |
atgctccttccactttcggatgcagagctgatagatcttactctatgatgatgtaactcttgatcatgtgaaattgatctagatat |
297 |
Q |
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| T |
11381223 |
atgctccttccactttcggatgcagagctgatagatcttactctatgatgatgtaactcttgatcatgtgaaattgatctagatat |
11381308 |
T |
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