View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13955_high_60 (Length: 247)
Name: NF13955_high_60
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13955_high_60 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 37561025 - 37560783
Alignment:
| Q |
1 |
cctttaggtttaaagttattgtaacaaatattcgttgaacttgtggaaaatgttgtaactgccaataaattattgtgtgatgaaaaagtgcaattaaagg |
100 |
Q |
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| T |
37561025 |
cctttaggtttaaagttagtgtaacaataattcgttgaacttgtggaaaatgttgtaactgcctataaattattgtgtgatgaaaaagtgcaattaaagg |
37560926 |
T |
|
| Q |
101 |
cgaaaaaccaatgaaacgaatgtggttgaatttgttgaatgtgtgatgtaaggttttggttcagtaatgcaggtattattgtttggatataacaataaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37560925 |
cgaaaaaccaatgaaacgaatgtggttgaatttgttgaatgtgttatgtaaggttttggttcagtaatgcaggtattattgtttggatataacaataaat |
37560826 |
T |
|
| Q |
201 |
taatagatgaattttgttgttgaagaagttgaatattcttgga |
243 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
37560825 |
taatagatgaattttgttgttgaagaagttgaatattgttgga |
37560783 |
T |
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