View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13955_low_24 (Length: 446)

Name: NF13955_low_24
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13955_low_24
NF13955_low_24
[»] chr7 (43 HSPs)
chr7 (1-420)||(31273998-31274427)
chr7 (297-423)||(21835232-21835359)
chr7 (297-423)||(22119969-22120096)
chr7 (297-423)||(40542903-40543030)
chr7 (302-423)||(654703-654824)
chr7 (297-423)||(2751352-2751479)
chr7 (297-423)||(23092177-23092304)
chr7 (304-421)||(3851840-3851958)
chr7 (304-423)||(7275358-7275478)
chr7 (298-423)||(21217827-21217953)
chr7 (302-423)||(29861751-29861873)
chr7 (297-424)||(10091268-10091395)
chr7 (304-423)||(17196950-17197070)
chr7 (304-423)||(39145652-39145772)
chr7 (313-423)||(7175871-7175982)
chr7 (297-423)||(16374075-16374202)
chr7 (297-421)||(22703569-22703694)
chr7 (297-423)||(11997930-11998057)
chr7 (297-421)||(28089899-28090027)
chr7 (304-411)||(33137825-33137932)
chr7 (313-385)||(22638407-22638480)
chr7 (304-423)||(27009440-27009561)
chr7 (297-424)||(2103135-2103261)
chr7 (304-423)||(18044188-18044308)
chr7 (302-421)||(31197673-31197793)
chr7 (313-408)||(43785308-43785404)
chr7 (297-423)||(2344380-2344507)
chr7 (297-423)||(42913506-42913633)
chr7 (347-423)||(21373791-21373868)
chr7 (304-407)||(31712902-31713006)
chr7 (313-423)||(17212134-17212245)
chr7 (297-423)||(23012501-23012628)
chr7 (304-423)||(27704083-27704202)
chr7 (304-421)||(22643342-22643460)
chr7 (313-421)||(19421314-19421423)
chr7 (297-366)||(27312291-27312360)
chr7 (370-423)||(36772370-36772423)
chr7 (304-423)||(28950952-28951072)
chr7 (317-423)||(9683907-9684014)
chr7 (375-424)||(13332495-13332544)
chr7 (297-341)||(13332427-13332471)
chr7 (297-357)||(21574095-21574155)
chr7 (297-341)||(22299966-22300010)
[»] chr8 (40 HSPs)
chr8 (297-423)||(39349337-39349464)
chr8 (297-423)||(4718726-4718853)
chr8 (297-423)||(8765519-8765646)
chr8 (297-423)||(34237648-34237775)
chr8 (304-423)||(21603311-21603431)
chr8 (297-423)||(3734616-3734743)
chr8 (313-423)||(28193555-28193666)
chr8 (297-423)||(42328085-42328212)
chr8 (297-423)||(2618267-2618394)
chr8 (297-423)||(14633035-14633162)
chr8 (313-423)||(264409-264519)
chr8 (313-423)||(651402-651512)
chr8 (313-423)||(837137-837247)
chr8 (314-423)||(15259416-15259526)
chr8 (297-423)||(20305989-20306116)
chr8 (297-423)||(21092622-21092749)
chr8 (312-421)||(28088369-28088479)
chr8 (304-423)||(6953008-6953127)
chr8 (304-423)||(42643118-42643238)
chr8 (297-421)||(24018465-24018591)
chr8 (297-423)||(32879360-32879487)
chr8 (297-385)||(2639404-2639493)
chr8 (297-421)||(18532190-18532306)
chr8 (297-423)||(19471690-19471818)
chr8 (297-423)||(19542614-19542742)
chr8 (297-423)||(19589954-19590082)
chr8 (304-424)||(20469997-20470117)
chr8 (297-423)||(27746328-27746455)
chr8 (297-423)||(34610680-34610807)
chr8 (317-366)||(13525692-13525741)
chr8 (317-366)||(13615227-13615276)
chr8 (297-421)||(4698716-4698841)
chr8 (313-394)||(7557960-7558041)
chr8 (313-366)||(8387468-8387521)
chr8 (297-366)||(33747021-33747090)
chr8 (316-406)||(28908920-28909012)
chr8 (317-423)||(26168862-26168968)
chr8 (323-420)||(21667634-21667731)
chr8 (304-341)||(9713618-9713655)
chr8 (304-421)||(25248432-25248547)
[»] chr5 (43 HSPs)
chr5 (297-423)||(19456204-19456330)
chr5 (297-423)||(18207284-18207411)
chr5 (297-423)||(8484654-8484781)
chr5 (297-423)||(27498724-27498851)
chr5 (313-423)||(38684285-38684395)
chr5 (297-424)||(15641099-15641226)
chr5 (297-423)||(4603854-4603981)
chr5 (297-423)||(32059433-32059560)
chr5 (297-422)||(10869558-10869684)
chr5 (304-423)||(11926501-11926622)
chr5 (304-423)||(6014280-6014400)
chr5 (302-421)||(7085624-7085744)
chr5 (304-423)||(23270522-23270642)
chr5 (297-385)||(41351097-41351185)
chr5 (313-423)||(35425090-35425201)
chr5 (313-423)||(27487563-27487675)
chr5 (302-421)||(30485907-30486027)
chr5 (313-423)||(11464917-11465027)
chr5 (297-423)||(31287939-31288066)
chr5 (304-422)||(5049215-5049333)
chr5 (304-423)||(34310219-34310339)
chr5 (313-387)||(13038464-13038539)
chr5 (304-421)||(9659311-9659429)
chr5 (297-421)||(12398441-12398566)
chr5 (297-366)||(37495189-37495258)
chr5 (313-423)||(33709512-33709621)
chr5 (304-407)||(28614486-28614589)
chr5 (304-423)||(42193562-42193680)
chr5 (313-382)||(13108459-13108529)
chr5 (304-366)||(22693070-22693132)
chr5 (297-342)||(10631282-10631327)
chr5 (313-366)||(13659254-13659307)
chr5 (333-421)||(15971151-15971240)
chr5 (297-366)||(38630972-38631041)
chr5 (304-423)||(19145412-19145531)
chr5 (375-423)||(25587009-25587057)
chr5 (324-411)||(34049900-34049988)
chr5 (304-366)||(930486-930548)
chr5 (302-411)||(21236360-21236470)
chr5 (297-385)||(22392803-22392892)
chr5 (374-423)||(37495124-37495173)
chr5 (322-366)||(3639905-3639949)
chr5 (348-423)||(15931136-15931211)
[»] chr4 (42 HSPs)
chr4 (297-423)||(5609195-5609322)
chr4 (297-423)||(27528788-27528915)
chr4 (297-423)||(34844751-34844878)
chr4 (302-423)||(40058850-40058972)
chr4 (297-420)||(19660525-19660649)
chr4 (304-423)||(33696279-33696399)
chr4 (313-423)||(20077993-20078104)
chr4 (297-423)||(45787697-45787824)
chr4 (313-423)||(52983696-52983807)
chr4 (297-423)||(32986274-32986401)
chr4 (317-423)||(32990512-32990619)
chr4 (310-423)||(9517647-9517761)
chr4 (304-423)||(20566427-20566547)
chr4 (304-423)||(34723876-34723996)
chr4 (297-420)||(44343594-44343718)
chr4 (313-423)||(54127351-54127462)
chr4 (302-423)||(46714470-46714592)
chr4 (313-423)||(49287935-49288045)
chr4 (317-423)||(55961767-55961873)
chr4 (297-421)||(22488021-22488146)
chr4 (302-421)||(18875515-18875634)
chr4 (297-423)||(36131503-36131630)
chr4 (304-366)||(23639759-23639821)
chr4 (304-366)||(23645417-23645479)
chr4 (313-423)||(30879175-30879285)
chr4 (318-423)||(20527048-20527153)
chr4 (304-423)||(25852291-25852412)
chr4 (303-421)||(21387486-21387603)
chr4 (313-365)||(33289190-33289242)
chr4 (313-368)||(12824533-12824588)
chr4 (313-422)||(27574396-27574506)
chr4 (370-424)||(35674808-35674862)
chr4 (304-366)||(51595157-51595219)
chr4 (319-423)||(32942447-32942552)
chr4 (370-423)||(33992703-33992756)
chr4 (299-380)||(52494609-52494690)
chr4 (304-411)||(12500059-12500166)
chr4 (297-385)||(28791230-28791318)
chr4 (317-423)||(13550285-13550392)
chr4 (376-423)||(29875848-29875895)
chr4 (311-365)||(4064996-4065050)
chr4 (313-341)||(43719096-43719124)
[»] chr3 (51 HSPs)
chr3 (297-423)||(10190735-10190862)
chr3 (297-423)||(10083812-10083939)
chr3 (297-423)||(15566493-15566619)
chr3 (297-423)||(53424170-53424296)
chr3 (304-423)||(52821636-52821755)
chr3 (297-406)||(24165708-24165817)
chr3 (297-421)||(40133442-40133567)
chr3 (304-423)||(49258262-49258382)
chr3 (297-423)||(8456143-8456270)
chr3 (297-423)||(25289708-25289834)
chr3 (313-423)||(25379838-25379949)
chr3 (297-423)||(48977465-48977592)
chr3 (297-423)||(30807146-30807273)
chr3 (319-423)||(35492988-35493093)
chr3 (297-420)||(8097272-8097396)
chr3 (304-423)||(32151501-32151621)
chr3 (313-423)||(18176896-18177007)
chr3 (297-423)||(26174190-26174317)
chr3 (297-423)||(45272409-45272536)
chr3 (297-423)||(46576425-46576552)
chr3 (297-423)||(53233904-53234030)
chr3 (297-420)||(17579128-17579253)
chr3 (304-421)||(21363022-21363140)
chr3 (304-423)||(31537838-31537958)
chr3 (304-423)||(39041852-39041972)
chr3 (297-424)||(45529748-45529875)
chr3 (297-423)||(2511290-2511417)
chr3 (304-423)||(53288713-53288832)
chr3 (313-423)||(30257701-30257812)
chr3 (313-423)||(33398477-33398588)
chr3 (304-422)||(4462711-4462829)
chr3 (304-423)||(7485531-7485645)
chr3 (359-423)||(7470271-7470335)
chr3 (370-423)||(26108369-26108422)
chr3 (322-423)||(29915288-29915389)
chr3 (322-423)||(29964441-29964542)
chr3 (297-366)||(53848427-53848496)
chr3 (304-404)||(54475777-54475878)
chr3 (304-423)||(34492575-34492695)
chr3 (304-382)||(24407379-24407458)
chr3 (304-366)||(4048085-4048147)
chr3 (297-342)||(3747740-3747785)
chr3 (313-385)||(55371303-55371376)
chr3 (313-365)||(4252405-4252457)
chr3 (313-365)||(48105013-48105065)
chr3 (297-423)||(1178249-1178374)
chr3 (297-411)||(52455642-52455757)
chr3 (297-343)||(39206149-39206195)
chr3 (313-342)||(11390761-11390790)
chr3 (313-366)||(26158946-26158999)
chr3 (370-423)||(40940902-40940955)
[»] chr2 (41 HSPs)
chr2 (297-420)||(34516407-34516530)
chr2 (297-422)||(35171878-35172004)
chr2 (297-423)||(15038036-15038163)
chr2 (297-423)||(33827566-33827693)
chr2 (297-423)||(44946046-44946173)
chr2 (297-423)||(3943817-3943944)
chr2 (297-423)||(28668950-28669077)
chr2 (297-421)||(36242305-36242430)
chr2 (304-423)||(11941210-11941330)
chr2 (304-423)||(30466830-30466950)
chr2 (302-421)||(41314071-41314190)
chr2 (302-407)||(4769259-4769365)
chr2 (304-423)||(13266567-13266686)
chr2 (297-420)||(24196084-24196206)
chr2 (323-423)||(44976172-44976274)
chr2 (304-421)||(27269344-27269462)
chr2 (313-423)||(8258974-8259085)
chr2 (304-423)||(17324843-17324961)
chr2 (370-423)||(4567504-4567557)
chr2 (304-381)||(4852649-4852726)
chr2 (304-385)||(29361664-29361745)
chr2 (304-423)||(41329920-41330039)
chr2 (297-405)||(2140479-2140589)
chr2 (297-417)||(19054108-19054230)
chr2 (372-423)||(27290665-27290716)
chr2 (313-423)||(45271461-45271572)
chr2 (304-405)||(6006890-6006992)
chr2 (297-342)||(27290733-27290778)
chr2 (297-366)||(39957893-39957962)
chr2 (304-383)||(6714295-6714375)
chr2 (297-365)||(18692096-18692164)
chr2 (304-385)||(25293273-25293356)
chr2 (320-422)||(1191591-1191694)
chr2 (372-423)||(10582059-10582110)
chr2 (297-340)||(43374323-43374366)
chr2 (302-368)||(14486958-14487024)
chr2 (304-366)||(44929846-44929908)
chr2 (313-366)||(9400970-9401023)
chr2 (313-366)||(18976464-18976517)
chr2 (313-357)||(12360305-12360349)
chr2 (371-411)||(19517031-19517071)
[»] chr6 (25 HSPs)
chr6 (297-423)||(3222629-3222755)
chr6 (304-423)||(654146-654266)
chr6 (304-423)||(11448948-11449068)
chr6 (297-423)||(15360091-15360218)
chr6 (297-423)||(34147423-34147550)
chr6 (297-423)||(34160039-34160166)
chr6 (304-421)||(9690638-9690756)
chr6 (297-423)||(21148504-21148630)
chr6 (297-421)||(9844017-9844142)
chr6 (297-423)||(21982314-21982440)
chr6 (304-421)||(28672146-28672264)
chr6 (304-381)||(33718469-33718547)
chr6 (297-423)||(1345012-1345139)
chr6 (313-423)||(9239052-9239163)
chr6 (326-423)||(12390502-12390600)
chr6 (313-385)||(17706328-17706401)
chr6 (302-421)||(11007244-11007364)
chr6 (304-423)||(11840978-11841097)
chr6 (304-423)||(5360071-5360191)
chr6 (304-401)||(15730495-15730593)
chr6 (297-421)||(17081047-17081172)
chr6 (371-423)||(12591714-12591766)
chr6 (297-341)||(14213042-14213086)
chr6 (304-423)||(17225744-17225863)
chr6 (318-423)||(9208329-9208435)
[»] chr1 (38 HSPs)
chr1 (304-423)||(24122100-24122220)
chr1 (297-423)||(4621230-4621357)
chr1 (297-423)||(15059395-15059522)
chr1 (304-423)||(9500355-9500475)
chr1 (313-421)||(1378977-1379085)
chr1 (297-420)||(7766720-7766844)
chr1 (313-423)||(24674470-24674581)
chr1 (297-423)||(23734193-23734321)
chr1 (297-423)||(23741385-23741513)
chr1 (304-421)||(45331621-45331740)
chr1 (297-423)||(7578486-7578613)
chr1 (313-423)||(17935846-17935957)
chr1 (297-423)||(27454857-27454986)
chr1 (302-423)||(30677253-30677375)
chr1 (302-423)||(46607887-46608009)
chr1 (297-421)||(8254745-8254870)
chr1 (297-421)||(33905503-33905628)
chr1 (304-423)||(7197247-7197366)
chr1 (313-423)||(18646930-18647041)
chr1 (297-423)||(168278-168405)
chr1 (297-423)||(32729622-32729748)
chr1 (313-411)||(32930838-32930937)
chr1 (313-403)||(34778436-34778527)
chr1 (315-423)||(8077724-8077832)
chr1 (304-423)||(18533724-18533844)
chr1 (302-366)||(48699894-48699958)
chr1 (302-381)||(27159205-27159284)
chr1 (313-423)||(45859052-45859163)
chr1 (304-366)||(35138123-35138185)
chr1 (313-421)||(8779745-8779854)
chr1 (297-342)||(14603955-14604000)
chr1 (347-423)||(7946921-7946997)
chr1 (317-368)||(16899636-16899687)
chr1 (299-366)||(23041657-23041724)
chr1 (303-385)||(25496493-25496573)
chr1 (305-334)||(16986291-16986320)
chr1 (313-342)||(40145890-40145919)
chr1 (313-385)||(37351462-37351534)
[»] scaffold0217 (1 HSPs)
scaffold0217 (304-423)||(7309-7429)
[»] scaffold0576 (1 HSPs)
scaffold0576 (297-423)||(5075-5202)
[»] scaffold0070 (1 HSPs)
scaffold0070 (297-423)||(40402-40528)
[»] scaffold0102 (1 HSPs)
scaffold0102 (302-423)||(39169-39291)
[»] scaffold0366 (2 HSPs)
scaffold0366 (297-424)||(9293-9420)
scaffold0366 (322-424)||(12019-12121)
[»] scaffold0459 (1 HSPs)
scaffold0459 (297-424)||(10688-10814)
[»] scaffold0019 (1 HSPs)
scaffold0019 (297-423)||(161886-162013)
[»] scaffold0623 (1 HSPs)
scaffold0623 (304-424)||(1057-1177)
[»] scaffold0328 (2 HSPs)
scaffold0328 (304-423)||(13047-13164)
scaffold0328 (305-420)||(15071-15186)
[»] scaffold0016 (1 HSPs)
scaffold0016 (297-424)||(32364-32491)
[»] scaffold0051 (1 HSPs)
scaffold0051 (297-423)||(52864-52991)
[»] scaffold0068 (1 HSPs)
scaffold0068 (313-422)||(41654-41763)
[»] scaffold1175 (1 HSPs)
scaffold1175 (304-411)||(2426-2534)
[»] scaffold0157 (1 HSPs)
scaffold0157 (304-411)||(20311-20418)
[»] scaffold0026 (2 HSPs)
scaffold0026 (304-423)||(97366-97486)
scaffold0026 (305-341)||(2478-2514)
[»] scaffold0049 (1 HSPs)
scaffold0049 (304-394)||(66860-66951)


Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 420
Target Start/End: Complemental strand, 31274427 - 31273998
Alignment:
Q  1 attttaaaaggtctcagcaatagaaattgctttatacttttgtnnnnnnntgaaagtgcaaatatagctagacaataacgaaaatccacggaaaactaga 100  Q
    ||||||||||||||  |||||||||||| || |||||||||||       ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  31274427 attttaaaaggtctt-gcaatagaaattactctatacttttgtaaaaaaatgaaagttcaaatatagctagacaataaccaaaatccacggaaaactaga 31274329  T
Q  101 agnnnnnnntttaacggaatatgcacacacnnnnnnnnn---------cttgcatattgtggcaaaggtcgtctataatatagtttagagatttatttag 191  Q
    ||       |||||||||||||||||||||                  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31274328 agaaaaaaatttaacggaatatgcacacacacaaaaaaaaaaaaaaaacttgcatattgtggcaaaagtcgtctataatatagtttagagatttatttag 31274229  T
Q  192 aacaatcaagttttatctcattagtcattaagtagagtcggctagatgggtcattggagatatattttaccaagtaaaaattctactaagaatac--nnn 289  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  31274228 aacaatcaaattttatctcattagtcattaaatagagtcggttagatgggtcattggagatatattttaccaagtaaaaattctactaagaatacctttt 31274129  T
Q  290 nnnnnncttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataac 389  Q
          ||||| |||||||| | |||||| ||||||||||||||||| |||||  | ||||||||| | |||||||| |||||||||||||||||| | |    
T  31274128 ttttttcttttttgaaaactcggtatccggtccaagaatcgactaattcgaggggaccaatctcactgcccacttgcggagccccgtttaaagccagagc 31274029  T
Q  390 aagcgctgtatggacttagcccgccgaaatt 420  Q
    |||| ||||||||||||||||||||||||||    
T  31274028 aagctctgtatggacttagcccgccgaaatt 31273998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 21835359 - 21835232
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  21835359 ttttttgaaaactcgatatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 21835260  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  21835259 tgtatggacttagcccaccgaaattggc 21835232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 22120096 - 22119969
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  22120096 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 22119997  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  22119996 tgtatggacttagcccaccgaaattggc 22119969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 40542903 - 40543030
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  40542903 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 40543002  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  40543003 tgtatggacttagcccaccgaaattggc 40543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 654703 - 654824
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||||| | ||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||| | | |||||||||||||| | ||||| |||||||    
T  654703 tgaaaactcggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaagctctgtatg 654802  T
Q  402 gacttagcccgccgaaattggc 423  Q
    |||||||||| |||||||||||    
T  654803 gacttagcccaccgaaattggc 654824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 2751479 - 2751352
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||| |||| | | ||||||||||||||| | ||||| |    
T  2751479 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctc 2751380  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  2751379 tgtatggacttagcccaccgaaattggc 2751352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 23092304 - 23092177
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||| ||||||||||||||||||  | ||||| ||||||||| |||| | | ||||||||||||||| | ||||| |    
T  23092304 ttttttgaaaactcggtatccgatccatgaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggccccgtttaaagccagagcaagctc 23092205  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  23092204 tgtatggacttagcccaccgaaattggc 23092177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 3851958 - 3851840
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||  | |||||||||||||||| | ||||| || |||||    
T  3851958 aaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctatatgg 3851859  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||| |||||||||    
T  3851858 acttagcccaccgaaattg 3851840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 7275478 - 7275358
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||| ||||||||||| | ||||| ||||||||    
T  7275478 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatgg 7275379  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  7275378 acttagcccaccgaaattggc 7275358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 298 - 423
Target Start/End: Original strand, 21217827 - 21217953
Alignment:
Q  298 tttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgct 396  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||  ||||||| ||||| |||||||   | | |||||||||||| | | ||||| ||    
T  21217827 tttctgaaaactcggtatccgatccaagaatcaactaatccgaggggatcaatcccaccgcccacttgtggggggcccgtttaaagctagagcaagctct 21217926  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| |||||||||||    
T  21217927 gtatggacttagcccaccgaaattggc 21217953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 29861873 - 29861751
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | ||||||||| |||||||||||||| |||||  ||||||| ||||| |||||||| | | ||||||||||||||| | ||||  ||||||    
T  29861873 tgaaaactcggtatccgatctaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttctgtat 29861774  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||||||||||    
T  29861773 ggacttagcccaccgaaattggc 29861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 10091395 - 10091268
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||| |||| ||||||||||||||||||||  ||||||| ||||| |||||||| | | |||| |||||||||| | ||||| |    
T  10091395 ttttttgaaaactcggtatcggatc-aagaatcgactaatccgaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctc 10091297  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    |||||||||||||||| ||||||||||||    
T  10091296 tgtatggacttagcccaccgaaattggct 10091268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 17196950 - 17197070
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||| |||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||    
T  17196950 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 17197049  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||| | |||||||||||    
T  17197050 acttagctcaccgaaattggc 17197070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 39145652 - 39145772
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctg-tatgg 402  Q
    |||||||| |||| ||| ||||||||||||||| |||||  | ||||| |||||||||||||||| | |||||||||||||| | ||||| ||| ||| |    
T  39145652 aaaacttggtatctgattcaagaatcgactaattcgaggggaccaatcccaccgtccacttgcaggggcccgtttaaagccagagcaagctctgttattg 39145751  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  39145752 acttagcccaccgaaattggc 39145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 7175871 - 7175982
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | | || ||||||||||| | ||||| |||||||||||||||||    
T  7175871 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcctgtttaaagccagagcaagctctgtatggacttagccc 7175970  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  7175971 accgaaattggc 7175982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 16374202 - 16374075
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||||||| ||||  | | |||||||||||||||| |||   |    
T  16374202 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccatttgcgggggtcccgtttaaagccatagcaaattc 16374103  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| ||| |||||||||||    
T  16374102 tgtatggacttaacccaccgaaattggc 16374075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 22703694 - 22703569
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||  | ||||| ||||| ||||||||  | | |||||||||||||| | |||||      
T  22703694 ttttttgaaaactgggtatccgatcaaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctt 22703595  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||||||| |||||||||    
T  22703594 tgtatggacttagcccaccgaaattg 22703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 11998057 - 11997930
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||| ||||| ||||||||  | |||| ||||||||||| | |||||      
T  11998057 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggcccagtttaaagccagagcaagcta 11997958  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||  |||||||||||    
T  11997957 tgtatggacttagccaaccgaaattggc 11997930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 28090027 - 28089899
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgc- 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | |||||||| || |||||||| | | ||| |||||||||| | ||||| |     
T  28090027 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcatcgcccacttgcgggggcccatttaaagccagagcaagctca 28089928  T
Q  396 ---tgtatggacttagcccgccgaaattg 421  Q
       |||||||||||||||| |||||||||    
T  28089927 ctttgtatggacttagcccaccgaaattg 28089899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 411
Target Start/End: Original strand, 33137825 - 33137932
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| ||||||||||| |||||||||||||| |||||  | |||| |||||| |||||||||| ||||| |||||||| | | | ||| |||||||||    
T  33137825 aaaactcgatatccgatctaagaatcgactaattcgaggggaccaatttcaccgcccacttgcagggccccatttaaagctagagcgagctctgtatgga 33137924  T
Q  404 cttagccc 411  Q
    ||||||||    
T  33137925 cttagccc 33137932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 385
Target Start/End: Complemental strand, 22638480 - 22638407
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagcca 385  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||| |||||||| || ||||||||||||||||    
T  22638480 tatccgatccaagaatcgactaattcgaggagatcaatcccaccgcccacttgcggaggccccgtttaaagcca 22638407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 27009561 - 27009440
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccactt-gcagag-ccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||| | ||||| ||||||||||||||||||  ||||  | ||||| |||||||||||| |||| | |||||||||||| || | ||||| |||||||    
T  27009561 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaatcccaccgtccactttgcaggggccccgtttaaagtcagagcaagctctgtatg 27009462  T
Q  402 gacttagcccgccgaaattggc 423  Q
    |||||||||| |||||||||||    
T  27009461 gacttagcccaccgaaattggc 27009440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 2103261 - 2103135
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| | |||||||||||||||||| |  ||||| ||||| |||||||| | | |||| |||||||||| | ||||| |    
T  2103261 ttttttgaaaactcggtatccgatc-atgaatcgactaatccgagggac-caatcccaccgcccacttgcgggggccccatttaaagccagagcaagctc 2103164  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    |||||||||||||||| ||||||||||||    
T  2103163 tgtatggacttagcccaccgaaattggct 2103135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 18044308 - 18044188
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||| ||||  | ||||  ||||  |||||||  | | ||||||||||||||| | ||||| ||||||||    
T  18044308 aaaactcggtatccgatccaagaatcgactaatctgaggggaccaattccaccacccacttgtgggggccccgtttaaagccagagcaagctctgtatgg 18044209  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  18044208 acttagcccaccgaaattggc 18044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 302 - 421
Target Start/End: Complemental strand, 31197793 - 31197673
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| ||||||||||||||||||||||||||| ||||  | ||||| ||||| ||||||||  | |||||||||||||| | | ||||  ||||||    
T  31197793 tgaaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccaccgaccacttgcgggggccccgtttaaagcaagagcaagatctgtat 31197694  T
Q  401 ggacttagcccgccgaaattg 421  Q
    |||||||  || |||||||||    
T  31197693 ggacttaatccaccgaaattg 31197673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 43785308 - 43785404
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagccataacaagcgctgtatggacttag 408  Q
    |||||||||||| ||||||||||||| |||  | |||||||||||||||||||| || |||||||||||| ||| |  |||| ||||||||||||||    
T  43785308 tatccgatccaaaaatcgactaatccaaggggaccaatctcaccgtccacttgcggaggccccgtttaaaaccagagtaagctctgtatggacttag 43785404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 2344507 - 2344380
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| | ||||||||||||||  | ||||| |||||  ||||||| | |  |||||||||||||| || |||| |    
T  2344507 ttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgctcacttgcgggggtcccgtttaaagccaaaaaaagctc 2344408  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| || ||||||||    
T  2344407 tgtatggacttagcccaccaaaattggc 2344380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 42913506 - 42913633
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||| ||||||||||||  | ||||| ||||||||||||||  | |||||||||||||||| | ||||  |    
T  42913506 ttttttgaaaactcggtatccgatctaagaatcaactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagttc 42913605  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
     ||||||||||| |||  ||||||||||    
T  42913606 cgtatggacttatcccatcgaaattggc 42913633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 423
Target Start/End: Complemental strand, 21373868 - 21373791
Alignment:
Q  347 caatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||||||| | | ||||||||||||||| | ||||| |||||| |||||||||| |||||||||||    
T  21373868 caatctcaccgtccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagcccaccgaaattggc 21373791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 31712902 - 31713006
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| || | |||| ||||||||| |  ||||| |||||||    
T  31712902 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgagggtcccgcttaaagccagagtaagcgttgtatgg 31713001  T
Q  403 actta 407  Q
    |||||    
T  31713002 actta 31713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 17212245 - 17212134
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||| |||||||||||||||||||||||||  | ||||| ||||   ||||||||| |  ||||||| |||||| | ||| | |||||||||||||||||    
T  17212245 tatctgatccaagaatcgactaatccgaggggaccaatcccaccactcacttgcaggggtcccgttttaagccagagcaatctctgtatggacttagccc 17212146  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  17212145 accgaaattggc 17212134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 23012501 - 23012628
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| | |||| ||||||| |||||  | ||||| ||||| |||||||  | | |||| |||||||||| | ||||| |    
T  23012501 ttttttgaaaactcggtatccgatcaatgaattgactaatacgaggggaccaatcccaccgcccacttgtgggggccccatttaaagccagagcaagctc 23012600  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  23012601 tgtatggacttagcccaccgaaattggc 23012628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 27704202 - 27704083
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | |||| ||| |||||||||||||||| ||||  ||||||| ||||  |||||||| | |  || |||||||||| | ||||| || ||||||    
T  27704202 aaaactcggtatctgattcaagaatcgactaatctgaggggatcaatcacaccacccacttgcgggggtccatttaaagccaaagcaagctctctatgga 27704103  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||||||| |||||||||||    
T  27704102 cttagcccaccgaaattggc 27704083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 22643342 - 22643460
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||||| |||| |||| ||||||||| ||||||||||  |  |||| ||||| |||||||| || || |||||||||| || | ||||| ||||||||    
T  22643342 aaaacttggtatctgatcaaagaatcgattaatccgaggggactaatcacaccggccacttgcgagggctccgtttaaagtcagagcaagctctgtatgg 22643441  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||  |||||||||    
T  22643442 acttagcctaccgaaattg 22643460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 19421423 - 19421314
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||| ||| |||||||||||||||||||||| | ||||| ||||| |||||||   | ||||| ||||||| || | ||||| |||||||||||||||||    
T  19421423 tatctgattcaagaatcgactaatccgaggagaccaatcccaccgcccacttgtgggcgccccatttaaagtcagagcaagctctgtatggacttagccc 19421324  T
Q  412 gccgaaattg 421  Q
      ||||||||    
T  19421323 atcgaaattg 19421314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 27312360 - 27312291
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||||||||||||||||||||||| ||||  | ||||| ||||| ||||||||    
T  27312360 ttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgc 27312291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 36772370 - 36772423
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | ||||| ||||||| ||||||||| |||||||||||    
T  36772370 gccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggc 36772423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 28951072 - 28950952
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||| | ||| | |||||  | ||||| ||||| | |||||| || | |||||||||||||| | ||||| || ||||     
T  28951072 aaaactcggtatccgatccaagaattgtctagttcgaggggaccaatcccaccgccgacttgcgagggacccgtttaaagccagagcaagctctatatga 28950973  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  28950972 acttagcccaccgaaattggc 28950952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 9684014 - 9683907
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccgccg 415  Q
    ||||||||||||||| ||||||||||  | | |||  |||| |||||||  | | ||||||||||||||| |  |||| | ||||||||||||||| |||    
T  9684014 cgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccg 9683915  T
Q  416 aaattggc 423  Q
    ||||||||    
T  9683914 aaattggc 9683907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 424
Target Start/End: Original strand, 13332495 - 13332544
Alignment:
Q  375 gtttaaagccataacaagcgctgtatggacttagcccgccgaaattggct 424  Q
    ||||||||||| |  |||| ||||||||||||||||| ||||||||||||    
T  13332495 gtttaaagccagagtaagctctgtatggacttagcccaccgaaattggct 13332544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 13332427 - 13332471
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgag 341  Q
    |||| |||||||| | |||| ||||||||||||||||||||||||    
T  13332427 ttttttgaaaactcggtatctgatccaagaatcgactaatccgag 13332471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 21574095 - 21574155
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccg 357  Q
    |||| |||||||| | ||||||||||||| | ||||||||||||||  | |||||||||||    
T  21574095 ttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatctcaccg 21574155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 22300010 - 22299966
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgag 341  Q
    |||| |||||||| | |||||||| ||||||||||||||||||||    
T  22300010 ttttttgaaaactcggtatccgattcaagaatcgactaatccgag 22299966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 39349464 - 39349337
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  39349464 ttttttgaaaacttggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 39349365  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  39349364 tgtatggacttagcccaccgaaattggc 39349337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 4718853 - 4718726
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  4718853 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 4718754  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  4718753 tgtatggacttagcccaccgaaattggc 4718726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 8765519 - 8765646
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  |||||||||||||||||| | ||||| |    
T  8765519 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctc 8765618  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||  ||||||||||    
T  8765619 tgtatggacttagcccatcgaaattggc 8765646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 34237648 - 34237775
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| |||||  ||||||| | | ||||||||||||||| | ||||| |    
T  34237648 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggccccgtttaaagccagagcaagctc 34237747  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  34237748 tgtatggacttagcccaccgaaattggc 34237775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 21603431 - 21603311
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| ||||||||    
T  21603431 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 21603332  T
Q  403 acttagcccgccgaaattggc 423  Q
     |||||||| |||||||||||    
T  21603331 gcttagcccaccgaaattggc 21603311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 3734616 - 3734743
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||| | ||| ||||  | |||||||||||||||| | ||||| |    
T  3734616 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccactgcccatttgcgggggccccgtttaaagccagagcaagctc 3734715  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  3734716 tgtatggacttagcccaccgaaattggc 3734743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 28193666 - 28193555
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||| || | ||||||||||||||| | ||||| ||||||||||||| |||    
T  28193666 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtaggggccccgtttaaagccagagcaagctctgtatggacttaaccc 28193567  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  28193566 accgaaattggc 28193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 42328212 - 42328085
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||| || ||||||||||  | | ||||||||||||||| | ||||| |    
T  42328212 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccatcgtccacttgtgggggccccgtttaaagccagagcaagctc 42328113  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  42328112 tgtatggacttagcccaccgaaattggc 42328085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 2618394 - 2618267
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| |  |||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | || ||||||||||||| | ||||| |    
T  2618394 ttttttgaaaactcggaatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctc 2618295  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||||||    
T  2618294 tgtatggacttagcccactgaaattggc 2618267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 14633162 - 14633035
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||  | ||||| ||||| |||||||  || || ||||| ||||||| | ||||| |    
T  14633162 ttttttgaaaacttggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgtggacgctccgttcaaagccagagcaagctc 14633063  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||| |||||||||| |||||||||||    
T  14633062 tgtatagacttagcccaccgaaattggc 14633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 264409 - 264519
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||| |||  | | |||||||||||||| | |||||  ||||| ||||||||||     
T  264409 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 264508  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  264509 ccgaaattggc 264519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 651512 - 651402
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||| |||  | | |||||||||||||| | |||||  ||||| ||||||||||     
T  651512 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 651413  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  651412 ccgaaattggc 651402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 837247 - 837137
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||||||||||||||||||||||| |||||  ||||||||||||| ||| |||  | | |||||||||||||| | |||||  ||||| ||||||||||     
T  837247 tatccgatccaagaatcgactaattcgaggggatcaatctcaccgcccatttgtgggggcccgtttaaagccagagcaagctatgtatagacttagccca 837148  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  837147 ccgaaattggc 837137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 15259416 - 15259526
Alignment:
Q  314 atccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    ||||||||||||||||||||||| |||||  | ||||  ||||| |||||||| | | ||||||||||||||| | ||||| |||||||||||||||||     
T  15259416 atccgatccaagaatcgactaattcgaggggaccaattacaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccca 15259515  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  15259516 ccgaaattggc 15259526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 20306116 - 20305989
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| |||||||||| |||||  | ||||| ||||| |||||||| | |  |||||||||||||| | ||||| |    
T  20306116 ttttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctc 20306017  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||  ||||||||||    
T  20306016 tgtatggacttagcccatcgaaattggc 20305989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 21092749 - 21092622
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| |||||||||| |||||  | ||||| ||||| |||||||| | |  |||||||||||||| | ||||| |    
T  21092749 ttttttgaaaactcggtatccgatccaaggatcgactaattcgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctc 21092650  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||  ||||||||||    
T  21092649 tgtatggacttagcccatcgaaattggc 21092622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 421
Target Start/End: Complemental strand, 28088479 - 28088369
Alignment:
Q  312 atatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagccataacaagcgctgtatggacttagcc 410  Q
    ||||||||||||||||||||||| || ||||  ||||||| ||||| |||||||| || ||||| ||||||| || | ||||| ||||||||||||| ||    
T  28088479 atatccgatccaagaatcgactattctgaggggatcaatcccaccgcccacttgcggaggccccatttaaagtcagagcaagctctgtatggacttaacc 28088380  T
Q  411 cgccgaaattg 421  Q
    | |||||||||    
T  28088379 caccgaaattg 28088369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 6953008 - 6953127
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||| ||||||||||||||||||||||||||  | ||||| ||||| | ||||||  | |||| ||||||||||| | ||||| ||||||||    
T  6953008 aaaactcggtattcgatccaagaatcgactaatccgagg-gaccaatcccaccgccaacttgcgggggccctgtttaaagccagagcaagctctgtatgg 6953106  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  6953107 acttagcccaccgaaattggc 6953127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 42643118 - 42643238
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcccc-gtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||| |||||| |||||  | ||||| ||||| |||||||| | ||||| |||| ||| || | ||||| ||||||||    
T  42643118 aaaactcggtatccgatccaagaatcaactaatgcgaggggaccaatcccaccgcccacttgcggggcccccgtttcaagacagagcaagctctgtatgg 42643217  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  42643218 acttagcccaccgaaattggc 42643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 24018591 - 24018465
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag--agccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| |||||||| |||||||| |||||||| | |||  | ||||||||||| |||||||  |  || |||||||||||||| | |||||     
T  24018591 ttttttgaaaactcgatatccggtccaagaaccgactaattcaaggggaccaatctcaccgcccacttgtggggaggcccgtttaaagccagagcaagct 24018492  T
Q  395 ctgtatggacttagcccgccgaaattg 421  Q
    ||||||||||||||||| | |||||||    
T  24018491 ctgtatggacttagcccactgaaattg 24018465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 32879487 - 32879360
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||| ||||||||||||||||||||||||  | ||||| ||||| |||||||   | ||||||||||| | || | ||||| |    
T  32879487 ttttttgaaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaatgtcagagcaagctc 32879388  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||| ||||||||| |||||||||||    
T  32879387 tgtatgaacttagcccaccgaaattggc 32879360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 2639404 - 2639493
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagcca 385  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | ||||||||||||||||    
T  2639404 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcca 2639493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 18532306 - 18532190
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||         |||||||||| |||||||||| | ||||||||||| ||| | ||||  |    
T  18532306 ttttttgaaaactcggtatccgatccaagaatcgactaatcc---------aatctcaccgcccacttgcaggggccccgtttaaatccagagcaagttc 18532216  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||||||| |||||||||    
T  18532215 tgtatggacttagcccaccgaaattg 18532190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 19471818 - 19471690
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | ||||||||||||| |||||||||| |||||  | ||||| || || |||||||| | |  ||||||||||||||| | |||||     
T  19471818 ttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagct 19471719  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| | || ||||||||    
T  19471718 ctgtatggacttagctcaccaaaattggc 19471690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 19542742 - 19542614
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | ||||||||||||| |||||||||| |||||  | ||||| || || |||||||| | |  ||||||||||||||| | |||||     
T  19542742 ttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagct 19542643  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| | || ||||||||    
T  19542642 ctgtatggacttagctcaccaaaattggc 19542614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 19589954 - 19590082
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | ||||||||||||| |||||||||| |||||  | ||||| || || |||||||| | |  ||||||||||||||| | |||||     
T  19589954 ttttttgaaaactcggtatccgatccaagtatcgactaattcgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagccagagcaagct 19590053  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| | || ||||||||    
T  19590054 ctgtatggacttagctcaccaaaattggc 19590082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 424
Target Start/End: Complemental strand, 20470117 - 20469997
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||| ||||||||||||||||| || ||||| ||||| ||||||||  | || | ||||||||||| | ||||| ||||||||    
T  20470117 aaaactcggtatccgatccaaaaatcgactaatccgagg-aaccaatcccaccgcccacttgcgggggctctgtttaaagccagagcaagctctgtatgg 20470019  T
Q  403 acttagcccgccgaaattggct 424  Q
    |||||||||  | |||||||||    
T  20470018 acttagcccatctaaattggct 20469997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 27746328 - 27746455
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtcc-acttgcagagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||| | ||||| ||||||||||||||||||||||||||  |  |||  || || || |||||  | ||||| |||||||||| | ||||| |    
T  27746328 ttttttgaaaaatcgatattcgatccaagaatcgactaatccgaggggactaattccatcgccccacttgtggggccccttttaaagccagagcaagctc 27746427  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  27746428 tgtatggacttagcccaccgaaattggc 27746455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 34610680 - 34610807
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||   |||| |||||||| || | | |||||||||||| | ||||| |    
T  34610680 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaattctaccgcccacttgcgaggggctcgtttaaagccagagcaagctc 34610779  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||| ||||||| || |||||||||||    
T  34610780 tgtatagacttagaccaccgaaattggc 34610807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 13525741 - 13525692
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  13525741 cgattcaagaatcgactaatccgaagacatcaatctcaccgtccacttgc 13525692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 366
Target Start/End: Complemental strand, 13615276 - 13615227
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  13615276 cgattcaagaatcgactaatccgaagacatcaatctcaccgtccacttgc 13615227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 4698716 - 4698841
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||| ||||| ||||||||||||||||||  | ||||| |||||  |||||||  | || ||||||||||||| | ||||  |    
T  4698716 ttttttgaaaactcggtatccaatccatgaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggctccgtttaaagccagagcaagttc 4698815  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |  ||||||||||||| |||||||||    
T  4698816 ttcatggacttagcccaccgaaattg 4698841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 394
Target Start/End: Original strand, 7557960 - 7558041
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcg 394  Q
    |||||||| ||| ||||||||||| |||||  | ||||| |||||||||||||| | |  ||||||||||||| ||||||||    
T  7557960 tatccgatgcaaaaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggtccgtttaaagccagaacaagcg 7558041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 8387468 - 8387521
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    ||||||||| ||| ||| ||||||||||||| ||||||| ||||||||||||||    
T  8387468 tatccgatctaaggatcaactaatccgaggagatcaatcccaccgtccacttgc 8387521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 33747090 - 33747021
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||||||||||| |||||||||||||||  || ||||  ||||||||||||||    
T  33747090 ttttttgaaaactcggtatccgatccaaggatcgactaatccgagagaaccaattccaccgtccacttgc 33747021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 406
Target Start/End: Complemental strand, 28909012 - 28908920
Alignment:
Q  316 ccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataac-aagcgctgtatggactt 406  Q
    |||||||||| | ||||||||| ||||  ||||||| || || |||||||| | ||||||||||||||||| ||| |||| ||||||||||||    
T  28909012 ccgatccaaggaccgactaatctgaggggatcaatcacatcgcccacttgcgggagccccgtttaaagccagaacaaagctctgtatggactt 28908920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 423
Target Start/End: Original strand, 26168862 - 26168968
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagcccgccg 415  Q
    |||||||||||||||||| |||||||  | |||||||| |  |||||||| || | | | |||||||||| ||||||| ||||||| |||| |||| |||    
T  26168862 cgatccaagaatcgactactccgaggggaccaatctcatcccccacttgcgaggggctcatttaaagccagaacaagctctgtatgaactt-gcccaccg 26168960  T
Q  416 aaattggc 423  Q
    ||||||||    
T  26168961 aaattggc 26168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 420
Target Start/End: Complemental strand, 21667731 - 21667634
Alignment:
Q  323 aagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaatt 420  Q
    ||||||||||||||| |||| |  ||||  ||||| |||||||| || || |||||||||| || | ||||| ||||||||||||||||| ||||||||    
T  21667731 aagaatcgactaatctgagggac-caattccaccgcccacttgcggatgctccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaatt 21667634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 9713655 - 9713618
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgag 341  Q
    |||||| | |||||||||||||||||||||||||||||    
T  9713655 aaaactcggtatccgatccaagaatcgactaatccgag 9713618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 25248547 - 25248432
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | ||||||||| || |||||||||||||||||  | ||||| ||||| ||||||||   | |||||||||||||| | ||| | |||||| ||    
T  25248547 aaaactcggtatccgatcaaa-aatcgactaatccgaggggaccaatcccaccgcccacttgcgagggcccgtttaaagccagagcaaactctgtat-ga 25248450  T
Q  404 cttagcccgccgaaattg 421  Q
    |||||||  |||||||||    
T  25248449 cttagcctaccgaaattg 25248432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 5e-32; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 19456204 - 19456330
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | |||||||||||||||| | ||||| ||    
T  19456204 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagccagagcaagctct 19456303  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| |||||||||||    
T  19456304 gtatggacttagcccaccgaaattggc 19456330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 18207411 - 18207284
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccc-cgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | || |||||||||||| ||||||| |    
T  18207411 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggcctcgtttaaagccagaacaagctc 18207312  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  18207311 tgtatggacttagcccaccgaaattggc 18207284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 8484654 - 8484781
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  8484654 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 8484753  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||| ||||||||| |||||||||||    
T  8484754 tgtatgaacttagcccaccgaaattggc 8484781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 27498724 - 27498851
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | |||||      
T  27498724 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagcta 27498823  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  27498824 tgtatggacttagcccaccgaaattggc 27498851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 38684395 - 38684285
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    ||||||||||||||||||||||||||||||  | ||||| |||||  ||||||| | | |||||||||||||| | ||||| |||||||||||||||||     
T  38684395 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccagagcaagctctgtatggacttagccca 38684296  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  38684295 ccgaaattggc 38684285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 15641099 - 15641226
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  15641099 ttttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 15641197  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    |||||||||||||||| ||||||||||||    
T  15641198 tgtatggacttagcccaccgaaattggct 15641226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 4603981 - 4603854
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca-gagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| | ||||||||||||||  | ||||| ||||||||||||||| | |||||||||||||||| | | ||| |    
T  4603981 ttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgtccacttgcaggggccccgtttaaagccagagcgagctc 4603882  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||  ||||||||||    
T  4603881 tgtatggacttagcccatcgaaattggc 4603854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 32059433 - 32059560
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| | ||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  32059433 ttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 32059532  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  32059533 tgtatggacttagcccaccgaaattggc 32059560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 422
Target Start/End: Original strand, 10869558 - 10869684
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||| || ||||| |||||||||| | ||||| |    
T  10869558 ttttttgaaaacttggtatccgatccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcggaggccccatttaaagccagagcaagctc 10869657  T
Q  396 tgtatggacttagcccgccgaaattgg 422  Q
     || |||||||||||| ||||||||||    
T  10869658 agtgtggacttagcccaccgaaattgg 10869684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 11926501 - 11926622
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||  |||||||| | |  ||||||||||||||| | ||||| |||||||    
T  11926501 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccacccacttgcggggggccccgtttaaagccagagcaagctctgtatg 11926600  T
Q  402 gacttagcccgccgaaattggc 423  Q
    |||||||||| |||||||||||    
T  11926601 gacttagcccaccgaaattggc 11926622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 6014280 - 6014400
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| |||||||||||||||||||||||||| |||||  |  |||||||||| ||||||||  |  ||||||||||||||| | ||||| ||||||||    
T  6014280 aaaactcgatatccgatccaagaatcgactaattcgaggggactaatctcaccgcccacttgcgtggaccccgtttaaagccagagcaagctctgtatgg 6014379  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||| ||| |||||||||||    
T  6014380 acttaacccaccgaaattggc 6014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 302 - 421
Target Start/End: Original strand, 7085624 - 7085744
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | |||||||| |||||||||||||||||||||  | ||||| ||||| |||||||| | | |||||||||||| || | ||||| ||||||    
T  7085624 tgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagtcagagcaagctctgtat 7085723  T
Q  401 ggacttagcccgccgaaattg 421  Q
    ||||||||||| |||||||||    
T  7085724 ggacttagcccaccgaaattg 7085744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 23270522 - 23270642
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||||| ||||| ||||||||||| ||||||||||||  | ||||| ||||||||| |||| | | | ||||||||||||| | ||||| ||||||||    
T  23270522 aaaacttggtatccaatccaagaatcaactaatccgaggggaccaatcccaccgtccatttgcgggggctccgtttaaagccaaagcaagctctgtatgg 23270621  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  23270622 acttagcccaccgaaattggc 23270642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 385
Target Start/End: Original strand, 41351097 - 41351185
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagcca 385  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| ||||||||||||||||||    
T  41351097 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggagccccgtttaaagcca 41351185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 35425201 - 35425090
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||||||||   | ||||| ||||| |||||||| | | ||||||||||||||| | | ||| |||||||||||||||||    
T  35425201 tatccgatccaagaatcgactaatccgagaggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcgagctctgtatggacttagccc 35425102  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  35425101 accgaaattggc 35425090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 27487563 - 27487675
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca--gagccccgtttaaagccataacaagcgctgtatggacttagcc 410  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||||  |  ||||||||||||| | | ||||| |||||||||||||| |    
T  27487563 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaagggcccccgtttaaagctagagcaagctctgtatggacttagtc 27487662  T
Q  411 cgccgaaattggc 423  Q
    | |||||||||||    
T  27487663 caccgaaattggc 27487675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 302 - 421
Target Start/End: Complemental strand, 30486027 - 30485907
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | |||||||||||||||| |||||||||||||  | ||||| ||||| ||||||||  | ||  |||||||||||| | ||||| ||||||    
T  30486027 tgaaaactcggtatccgatccaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggcatcgtttaaagccagagcaagctctgtat 30485928  T
Q  401 ggacttagcccgccgaaattg 421  Q
    ||||||||||| |||||||||    
T  30485927 ggacttagcccaccgaaattg 30485907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 11464917 - 11465027
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||||||||||||||||||||||| |||||  | ||||| ||||  |||||||| | |||||||||||||||| |  |||| ||||||| |||||||||     
T  11464917 tatccgatccaagaatcgactaattcgaggggaccaatcccaccacccacttgcggggccccgtttaaagccagagtaagctctgtatgaacttagccca 11465016  T
Q  413 ccgaaattggc 423  Q
    || ||||||||    
T  11465017 ccaaaattggc 11465027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 31287939 - 31288066
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||| |||||||| |||||||| |||||| | ||||| ||||| |||||||| | | |||||||||||| || | |||||      
T  31287939 ttttttgaaaactcggtatccggtccaagaaccgactaattcgaggagaccaatcccaccgcccacttgcgggggccccgtttaaagtcaaagcaagctt 31288038  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| ||| |||||||||||    
T  31288039 tgtatggacttaacccaccgaaattggc 31288066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 422
Target Start/End: Complemental strand, 5049333 - 5049215
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||||| ||| |||||||||||||||||||| ||| |  | ||||| ||||||||| |||| | | |||||||||||||| | ||||| ||||||| |    
T  5049333 aaaacttggtattcgatccaagaatcgactaattcgatgggaccaatcccaccgtccatttgcgggggcccgtttaaagccagagcaagctctgtatgaa 5049234  T
Q  404 cttagcccgccgaaattgg 422  Q
    ||||| ||  |||||||||    
T  5049233 cttagaccatcgaaattgg 5049215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 34310339 - 34310219
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||| |||| |||||  | ||||| ||||||||||||   | |  |||||||||||||| | ||||| ||||||||    
T  34310339 aaaactcggtatccgatccaagaatcgattaattcgaggggaccaatcccaccgtccacttatgggggtcccgtttaaagccagagcaagctctgtatgg 34310240  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| || ||||||||    
T  34310239 acttagcccaccaaaattggc 34310219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 13038464 - 13038539
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccata 387  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||| ||||||||  | ||||||||||||||||||    
T  13038464 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccata 13038539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 9659311 - 9659429
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||| ||||||||||| |||||||||| |  | ||||| ||||||||||||||  | | ||| |||||||||| | |||||  |||||||    
T  9659311 aaaactcggtatcccatccaagaatcaactaatccgaagggaccaatcccaccgtccacttgcggggggcccatttaaagccagagcaagctgtgtatgg 9659410  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||| |||||||||    
T  9659411 acttagcccaccgaaattg 9659429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 12398441 - 12398566
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||| ||||||||| ||||||||  |||   ||||||||||||||||| ||||  | ||||| |||||||||| | ||||| |    
T  12398441 ttttttgaaaactcggtatccaatccaagaaccgactaatttgagaggatcaatctcaccgtccatttgcgggggccccatttaaagccagagcaagctc 12398540  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||| |||||| || |||||||||    
T  12398541 tgtatgaacttaggccaccgaaattg 12398566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 37495258 - 37495189
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||    
T  37495258 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc 37495189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 33709512 - 33709621
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||   | | |||||||||||||| | |   | |||||||||||||||||    
T  33709512 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggtcccgtttaaagccagagc--tctctgtatggacttagccc 33709609  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  33709610 accgaaattggc 33709621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 28614486 - 28614589
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | |||||||||||| ||||||||||| |||||  ||||||| |||||||||  ||| |   ||||||||||| || |||||||  ||||||||    
T  28614486 aaaactcggtatccgatccaaaaatcgactaattcgaggggatcaatcccaccgtccatctgcgggatcccgtttaaagtcagaacaagctttgtatgga 28614585  T
Q  404 ctta 407  Q
    ||||    
T  28614586 ctta 28614589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 42193680 - 42193562
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||| |||||||| ||||||||||||||||||||||||   | ||| | ||||| |||||||| | |  || |||||||||| | ||| | |||||| ||    
T  42193680 aaaaattgatatctgatccaagaatcgactaatccgagaggaccaaccccaccgcccacttgc-ggggtccatttaaagccaaagcaaactctgtataga 42193582  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||||||| |||||||||||    
T  42193581 cttagcccaccgaaattggc 42193562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 13108459 - 13108529
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaag 382  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||| ||||||||  | |||||||||||||    
T  13108459 tatccgatccaagaatcgactaattcgaggggatcaatcccaccgcccacttgcgggggccccgtttaaag 13108529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 22693132 - 22693070
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||    
T  22693132 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc 22693070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 342
Target Start/End: Original strand, 10631282 - 10631327
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgagg 342  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||    
T  10631282 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagg 10631327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 13659254 - 13659307
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    ||||||||||||||||||| ||||||||||  ||||||| ||||| ||||||||    
T  13659254 tatccgatccaagaatcgattaatccgaggggatcaatcccaccgcccacttgc 13659307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 15971151 - 15971240
Alignment:
Q  333 taatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattg 421  Q
    ||||||||||  ||||||||||||| |||||||| | |  ||||||||||| || | |||||  |||||||||||||||| |||||||||    
T  15971151 taatccgaggggatcaatctcaccgcccacttgcgggggtcccgtttaaagtcagagcaagctatgtatggacttagcccaccgaaattg 15971240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 38630972 - 38631041
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||||||||||||||||| ||||||||||  | ||||| ||||| ||||||||    
T  38630972 ttttttgaaaactcggtatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgc 38631041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 19145412 - 19145531
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataac-aagcgctgtatgg 402  Q
    |||||| | ||||||||||||||| | ||||||||||||  | ||||| ||||| |||||||| | |  || |||||||||| | | |||| ||||||||    
T  19145412 aaaactcggtatccgatccaagaaccaactaatccgaggggaccaatcccaccgcccacttgcgggggaccatttaaagccagagcaaagctctgtatgg 19145511  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||| |||| |||||||||||    
T  19145512 actt-gcccaccgaaattggc 19145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 25587057 - 25587009
Alignment:
Q  375 gtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  25587057 gtttaaagccagagcaagctctgtatggacttagcccaccgaaattggc 25587009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 411
Target Start/End: Complemental strand, 34049988 - 34049900
Alignment:
Q  324 agaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||| ||||||||||||  | |||||  |||| |||||||| | | ||||||||||||||| | ||||| |||||||||||||||||    
T  34049988 agaatcaactaatccgaggggaccaatcctaccgaccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 34049900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 930486 - 930548
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| ||||||||||||||| | ||||||||||||||  | ||||| ||| ||||||||||    
T  930486 aaaactcgatatccgatccaaggaccgactaatccgaggggaccaatcacactgtccacttgc 930548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 411
Target Start/End: Original strand, 21236360 - 21236470
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | |||||||| |||||||||||||||| ||||  |  |||| ||||| ||||||||  | ||||||||||||| || |  || | ||||||    
T  21236360 tgaaaactcggtatccgattcaagaatcgactaatctgaggggactaatcccaccgcccacttgcgggggccccgtttaaagtcagagaaaactctgtat 21236459  T
Q  401 ggacttagccc 411  Q
    |||||||||||    
T  21236460 ggacttagccc 21236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 22392892 - 22392803
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagcca 385  Q
    |||| |||||||| | |||||||||||| |||||||||||| ||||  | ||||  ||||| ||||||||  | ||||||||||||||||    
T  22392892 ttttttgaaaactcggtatccgatccaaaaatcgactaatctgaggggaccaattccaccgcccacttgcgggggccccgtttaaagcca 22392803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 37495173 - 37495124
Alignment:
Q  374 cgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| | ||||| ||||||||||||||||| || ||||||||    
T  37495173 cgtttaaagccagagcaagctctgtatggacttagcccaccaaaattggc 37495124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 366
Target Start/End: Complemental strand, 3639949 - 3639905
Alignment:
Q  322 caagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||    
T  3639949 caagaatcgactaatctgaggggatcaatctcactgtccacttgc 3639905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 423
Target Start/End: Complemental strand, 15931211 - 15931136
Alignment:
Q  348 aatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||| ||||| |||||||| ||||||| ||||||||||| | || || |||||||||||||| || |||||||||||    
T  15931211 aatcccaccgcccacttgcgagagccctgtttaaagccagagcaggctctgtatggacttag-ccaccgaaattggc 15931136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 5609195 - 5609322
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||  | ||||| |||||||||| | ||||| |    
T  5609195 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctc 5609294  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  5609295 tgtatggacttagcccaccgaaattggc 5609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 27528788 - 27528915
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||||||||| ||||||||  | ||||||| |||||||| | ||||| |    
T  27528788 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatctcaccgcccacttgcgggggccccgtataaagccagagcaagctc 27528887  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  27528888 tgtatggacttagcccaccgaaattggc 27528915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 34844751 - 34844878
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  34844751 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 34844850  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  34844851 tgtatggacttagcccaccgaaattggc 34844878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 423
Target Start/End: Original strand, 40058850 - 40058972
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||    
T  40058850 tgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtat 40058949  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||||||||||    
T  40058950 ggacttagcccaccgaaattggc 40058972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 19660525 - 19660649
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||  | |||| ||||||||||| | ||||| |    
T  19660525 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctc 19660624  T
Q  396 tgtatggacttagcccgccgaaatt 420  Q
    |||||||||||| ||| ||||||||    
T  19660625 tgtatggacttatcccaccgaaatt 19660649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 33696279 - 33696399
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| |||||||||||||||||| ||||||||||||   | ||||||||||| ||||||||  | ||||| |||||||||| | ||||| ||||||||    
T  33696279 aaaactcgatatccgatccaagaattgactaatccgagaggaccaatctcaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatgg 33696378  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  33696379 acttagcccaccgaaattggc 33696399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 20077993 - 20078104
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||||||||| ||  |||| ||||| |||||| | | | ||||||||||||||| | ||||| |||||||||||||||||    
T  20077993 tatccgatccaagaatcgactaatccgagggaactaatcccaccgcccacttacgggggccccgtttaaagccagagcaagctctgtatggacttagccc 20078092  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  20078093 accgaaattggc 20078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 45787697 - 45787824
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||| ||||||||||||||  | |||| ||||||||||| | ||||| |    
T  45787697 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccctgtttaaagccagagcaagctc 45787796  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||||||    
T  45787797 tgtatggacttagcccactgaaattggc 45787824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 52983807 - 52983696
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |||||||||||||||||    
T  52983807 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 52983708  T
Q  412 gccgaaattggc 423  Q
     | |||||||||    
T  52983707 actgaaattggc 52983696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 32986401 - 32986274
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||| |||||||  | ||||| ||||| ||||||||  | ||||| ||||||| || | ||||| |    
T  32986401 ttttttgaaaactcggtatccgatccaagaatcgactattccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctc 32986302  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  32986301 tgtatggacttagcccaccgaaattggc 32986274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 32990619 - 32990512
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccgccg 415  Q
    |||||||||||||||||| |||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||||||||||| |||    
T  32990619 cgatccaagaatcgactagtccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccg 32990520  T
Q  416 aaattggc 423  Q
    ||||||||    
T  32990519 aaattggc 32990512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 423
Target Start/End: Original strand, 9517647 - 9517761
Alignment:
Q  310 tgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttag 408  Q
    |||||||||||||||||||||||||||||||||  | ||||||||||  |||| |||  | ||||||||||||| || | ||||| ||||||||||||||    
T  9517647 tgatatccgatccaagaatcgactaatccgaggggaccaatctcaccacccacctgcgggggccccgtttaaagtcagagcaagctctgtatggacttag 9517746  T
Q  409 cccgccgaaattggc 423  Q
    ||| | |||||||||    
T  9517747 cccactgaaattggc 9517761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 20566547 - 20566427
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| ||||||||||||||||||||||||||| ||||  | ||||| || || |||||||| | | | ||||||||||||| | ||||| ||||||||    
T  20566547 aaaactcgatatccgatccaagaatcgactaatctgaggggaccaatcccagcgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgg 20566448  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||| |||| |||||||||||    
T  20566447 actttgcccaccgaaattggc 20566427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 34723996 - 34723876
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||||||||   | ||||| ||||  |||||||| | | ||||||||||||||| | |||||  |||||||    
T  34723996 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctttgtatgg 34723897  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  34723896 acttagcccaccgaaattggc 34723876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 44343718 - 44343594
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||| ||||||||||||||| |||||  | ||||| ||||| ||||||||  ||||||||||||||| || | ||||| |    
T  44343718 ttttttgaaaactcggtatccgattcaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagtcagagcaagctc 44343619  T
Q  396 tgtatggacttagcccgccgaaatt 420  Q
    |||||||||||||||| || |||||    
T  44343618 tgtatggacttagcccaccaaaatt 44343594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 54127351 - 54127462
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||| |||||||| ||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |||||| ||||||||||    
T  54127351 tatccggtccaagaaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatagacttagccc 54127450  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  54127451 accgaaattggc 54127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 46714592 - 46714470
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | |||||||| ||||||| |||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||| |   ||||| ||||||    
T  46714592 tgaaaactcggtatccgattcaagaattgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagcaagggcaagctctgtat 46714493  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||||||||||    
T  46714492 ggacttagcccaccgaaattggc 46714470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 49288045 - 49287935
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||| |||||||||||||||||||||||||  | |||||||| || |||||||| |   |||||||||||||||| |||    ||||||||||||||||     
T  49288045 tatctgatccaagaatcgactaatccgaggggaccaatctcagcgcccacttgcgggagcccgtttaaagccatagcaaattttgtatggacttagccca 49287946  T
Q  413 ccgaaattggc 423  Q
    |||||||||||    
T  49287945 ccgaaattggc 49287935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 423
Target Start/End: Original strand, 55961767 - 55961873
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccga 416  Q
    |||| |||||||||| |||||||| | || ||||| ||||| |||||||  | ||||||||||||| || | ||||| ||||||||||||||||| ||||    
T  55961767 cgattcaagaatcgattaatccgaaggaaccaatcccaccgcccacttgtggggccccgtttaaagtcagagcaagctctgtatggacttagcccaccga 55961866  T
Q  417 aattggc 423  Q
    |||||||    
T  55961867 aattggc 55961873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 22488021 - 22488146
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| ||||||||||||| | ||||||||  ||||  ||||||| ||||| ||| |||| | | ||||||||||||||| ||||||| |    
T  22488021 ttttttgaaaacttggtatccgatccaaggaccgactaatttgaggggatcaatcccaccgcccatttgcgggggccccgtttaaagccagaacaagctc 22488120  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    | ||||||||||| || |||||||||    
T  22488121 tatatggacttagtccaccgaaattg 22488146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 421
Target Start/End: Original strand, 18875515 - 18875634
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||||| | |||| ||||||| ||| |||||||||||||  ||||||| |||   |||||||  | | |||||||||||||| | ||||| |||||||    
T  18875515 tgaaaactcggtatctgatccaaaaattgactaatccgaggggatcaatcccactacccacttgtgggggcccgtttaaagccagagcaagctctgtatg 18875614  T
Q  402 gacttagcccgccgaaattg 421  Q
    |||||||||| |||||||||    
T  18875615 gacttagcccaccgaaattg 18875634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 36131503 - 36131630
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||| |||| || |||||||||||||||||  | ||||| ||||| |||||| | | |  ||||||||||| |||| ||||| |    
T  36131503 ttttttgaaaactcggtatctgatctaataatcgactaatccgaggggaccaatcccaccgcccacttacgggggtcccgtttaaagtcatagcaagctc 36131602  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||| || |||||||||||    
T  36131603 tgtatggacttaggccaccgaaattggc 36131630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 23639821 - 23639759
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||||||||||||    
T  23639821 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgc 23639759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 23645479 - 23645417
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||||||||||||    
T  23645479 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgc 23645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 30879175 - 30879285
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    |||| |||||||||||||| ||||| |||| || ||||| ||||||||||||||||  |||| |||||||||| | ||| |  |||||||| ||| |||     
T  30879175 tatctgatccaagaatcgattaatctgagggaaccaatcccaccgtccacttgcaggaccccctttaaagccagagcaaactttgtatggatttaaccca 30879274  T
Q  413 ccgaaattggc 423  Q
     ||||||||||    
T  30879275 tcgaaattggc 30879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 20527048 - 20527153
Alignment:
Q  318 gatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaa 417  Q
    ||||||| |||||||||||||||||| | |||||  |||| |||||| | | |||| ||||||| | | | ||||| || |||||||||||||| |||||    
T  20527048 gatccaaaaatcgactaatccgaggagaccaatcctaccgcccacttacggggccctgtttaaaccgaaatcaagctctatatggacttagcccaccgaa 20527147  T
Q  418 attggc 423  Q
    ||||||    
T  20527148 attggc 20527153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 25852412 - 25852291
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccg-tttaaagccataacaagcgctgtatg 401  Q
    |||||| | |||||| |||||||| ||||||||||||||  | ||||| ||  | |||||||| || | |||| |||||||||| | ||||| |||||||    
T  25852412 aaaactcggtatccggtccaagaaccgactaatccgaggggaccaatcccattgcccacttgcgagggtcccgttttaaagccagagcaagctctgtatg 25852313  T
Q  402 gacttagcccgccgaaattggc 423  Q
    |||||||||| |||||||||||    
T  25852312 gacttagcccaccgaaattggc 25852291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 421
Target Start/End: Original strand, 21387486 - 21387603
Alignment:
Q  303 gaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatg 401  Q
    ||||||||| |||||||||||| |||||||||||||||||  | ||  | ||||| |||||||| | |  |||||||||||||| | ||||| ||||||     
T  21387486 gaaaacttggtatccgatccaataatcgactaatccgaggggacca--cccaccgcccacttgcggggatcccgtttaaagccagagcaagctctgtata 21387583  T
Q  402 gacttagcccgccgaaattg 421  Q
    |||||||||| || ||||||    
T  21387584 gacttagcccaccaaaattg 21387603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 33289242 - 33289190
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg 365  Q
    ||||||||||||||||||||||||||||||  |  ||||||||||||||||||    
T  33289242 tatccgatccaagaatcgactaatccgaggggactaatctcaccgtccacttg 33289190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 12824588 - 12824533
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag 368  Q
    |||||||||||||||||||||||| ||| || | ||||| ||||||||||||||||    
T  12824588 tatccgatccaagaatcgactaattcgatgagaccaatcccaccgtccacttgcag 12824533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 422
Target Start/End: Complemental strand, 27574506 - 27574396
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||| || ||||||||||  | ||| ||||||| ||||||||  | ||||| |||||||||| | ||||| ||||||| | ||||||     
T  27574506 tatccgatccaagaattgattaatccgaggggaccaaactcaccgcccacttgcgggggccccttttaaagccagagcaagctctgtatgaatttagcct 27574407  T
Q  412 gccgaaattgg 422  Q
     ||||||||||    
T  27574406 accgaaattgg 27574396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 424
Target Start/End: Original strand, 35674808 - 35674862
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggct 424  Q
    ||||||||||||| || | ||||| ||||||||||||||||| ||||||||||||    
T  35674808 gccccgtttaaaggcagagcaagctctgtatggacttagcccaccgaaattggct 35674862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 51595219 - 51595157
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||||||||| |||||||| || ||||||  ||||||||||||||    
T  51595219 aaaactcggtatccgatccaagaatcgattaatccgaagagatcaattccaccgtccacttgc 51595157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 32942552 - 32942447
Alignment:
Q  319 atccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgctgtatggacttagcccgccgaa 417  Q
    ||||||||||||| | ||||||||  | ||||| |||||||||||||  | |   ||||||||||||| |  |||| ||||||||||||||||| |||||    
T  32942552 atccaagaatcgatttatccgaggggaccaatcccaccgtccacttgtgggggggccgtttaaagccagagtaagctctgtatggacttagcccaccgaa 32942453  T
Q  418 attggc 423  Q
    ||||||    
T  32942452 attggc 32942447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 33992756 - 33992703
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||  |||||||||||||||| |||||||||||    
T  33992756 gccccgtttaaagccagagcaagctatgtatggacttagcccaccgaaattggc 33992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 299 - 380
Target Start/End: Complemental strand, 52494690 - 52494609
Alignment:
Q  299 ttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaa 380  Q
    |||| |||||| | |||||||||||||||||||||||| |||||  | ||||| ||||| |||||||||  | |||||||||    
T  52494690 ttcttaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcaagggcccgtttaa 52494609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 411
Target Start/End: Original strand, 12500059 - 12500166
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||| ||||||||| |||||||||||| | |||||| | |||| |||||||| | |  |||||||||||||| | |||||  |||||||    
T  12500059 aaaactcggtatccggtccaagaattgactaatccgag-agatcaattttaccgcccacttgcgggggtcccgtttaaagccagagcaagctatgtatgg 12500157  T
Q  403 acttagccc 411  Q
    |||||||||    
T  12500158 acttagccc 12500166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 28791318 - 28791230
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagcca 385  Q
    |||| |||||||| |||||||||| |||| | |||||||| |||   || ||||||||||| |||||||  ||| ||||||||||||||    
T  28791318 ttttttgaaaactcgatatccgattcaaggaccgactaattcgaaagaaccaatctcaccgcccacttgtggagacccgtttaaagcca 28791230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 423
Target Start/End: Complemental strand, 13550392 - 13550285
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccgccg 415  Q
    ||||||||||||||| ||||||||||  | | |||  |||| |||||||  | | ||||||||||||||| |  |||| | ||||||||||||||| |||    
T  13550392 cgatccaagaatcgattaatccgaggggacctatcctaccgcccacttgtggggaccccgtttaaagccagagtaagctcggtatggacttagcccaccg 13550293  T
Q  416 aaattggc 423  Q
    ||||||||    
T  13550292 aaattggc 13550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 423
Target Start/End: Original strand, 29875848 - 29875895
Alignment:
Q  376 tttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    ||||||| || ||||||| ||||||||||||||||| |||||||||||    
T  29875848 tttaaagtcagaacaagctctgtatggacttagcccaccgaaattggc 29875895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 4065050 - 4064996
Alignment:
Q  311 gatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg 365  Q
    |||||||||||||| |||||||||||||||||  | ||||| ||||| |||||||    
T  4065050 gatatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttg 4064996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 341
Target Start/End: Original strand, 43719096 - 43719124
Alignment:
Q  313 tatccgatccaagaatcgactaatccgag 341  Q
    |||||||||||||||||||||||||||||    
T  43719096 tatccgatccaagaatcgactaatccgag 43719124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 10190735 - 10190862
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||||||||||||  | |||||||||||||||| | ||||| |    
T  10190735 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccagagcaagctc 10190834  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  10190835 tgtatggacttagcccaccgaaattggc 10190862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 10083812 - 10083939
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| |||||||||||||   | |||||||||||||||| | ||||| |    
T  10083812 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgtccacttgtgggggccccgtttaaagccagagcaagctc 10083911  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  10083912 tgtatggacttagcccaccgaaattggc 10083939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 15566493 - 15566619
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||||||||||||||||||| ||||  | ||||| ||||| |||||||| | | |||||||||||||| | ||||| ||    
T  15566493 ttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggcccgtttaaagccagagcaagctct 15566592  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| |||||||||||    
T  15566593 gtatggacttagcccaccgaaattggc 15566619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 53424170 - 53424296
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| |||||  ||||||| | | |||||||||||||||| ||| | ||    
T  53424170 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgctcacttgcgggggcccgtttaaagccatagcaaactct 53424269  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| |||||||||||    
T  53424270 gtatggacttagcccaccgaaattggc 53424296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 52821636 - 52821755
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||| | | |||||||||||||||| | ||||| |||||||||    
T  52821636 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttacggggccccgtttaaagccagagcaagctctgtatgga 52821735  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||||| | |||||||||||    
T  52821736 cttagctcaccgaaattggc 52821755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 406
Target Start/End: Original strand, 24165708 - 24165817
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | |||||||||||||||| | ||||| ||    
T  24165708 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaacaatcccaccgcccacttgcggggccccgtttaaagccagagcaagctct 24165807  T
Q  397 gtatggactt 406  Q
    ||||||||||    
T  24165808 gtatggactt 24165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 40133442 - 40133567
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  40133442 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 40133541  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||||||| |||||||||    
T  40133542 tgtatggacttagcccaccgaaattg 40133567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 49258262 - 49258382
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||  | | ||||||||||||||| | ||||| ||||||||    
T  49258262 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccagagcaagctctgtatgg 49258361  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  49258362 acttagcccaccgaaattggc 49258382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 8456143 - 8456270
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||| |||||||||||||||||||||  | ||||| ||| | |||||||| | | ||||||||||||||| | ||||| |    
T  8456143 ttttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccactgcccacttgcgggggccccgtttaaagccagagcaagctc 8456242  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  8456243 tgtatggacttagcccaccgaaattggc 8456270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 25289708 - 25289834
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| ||||| |  ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  25289708 ttttttgaaaactcggtatccgatccaagaatcgactaattcgagggac-caatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 25289806  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  25289807 tgtatggacttagcccaccgaaattggc 25289834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 25379949 - 25379838
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| || ||||| | | ||||||||||||||| | ||||| |||||||||||||||||    
T  25379949 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccgcttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 25379850  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  25379849 tccgaaattggc 25379838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 48977592 - 48977465
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||| | ||||||||||||||  | ||||| ||||| |||||||||| | ||||||||||||||| | ||||| |    
T  48977592 ttttttgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcaggggccccgtttaaagccagagcaagctc 48977493  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| ||| |||||||||||    
T  48977492 tgtatggacttaacccaccgaaattggc 48977465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 30807146 - 30807273
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| |  |||||  |||| |||||||| | |  ||||||||||||||| | |||||     
T  30807146 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagggac-caatcctaccgcccacttgcggggggccccgtttaaagccagagcaagct 30807244  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||| |||||||||||    
T  30807245 ctgtatggacttagcccaccgaaattggc 30807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 35493093 - 35492988
Alignment:
Q  319 atccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagcccgccgaa 417  Q
    ||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||||||||||| |||||    
T  35493093 atccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagcccaccgaa 35492994  T
Q  418 attggc 423  Q
    ||||||    
T  35492993 attggc 35492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 8097272 - 8097396
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | || || |    
T  8097272 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcatgctc 8097371  T
Q  396 tgtatggacttagcccgccgaaatt 420  Q
    ||||||||||||||||  |||||||    
T  8097372 tgtatggacttagcccatcgaaatt 8097396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 32151621 - 32151501
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||| |||||  | ||||||||||| ||||||||  | |||||||||||||||| | ||||| |||||||     
T  32151621 aaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatga 32151522  T
Q  403 acttagcccgccgaaattggc 423  Q
     |||||||| |||||||||||    
T  32151521 gcttagcccaccgaaattggc 32151501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 18176896 - 18177007
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||||||| |  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |||||||||||||| ||    
T  18176896 tatccgatccaagaatcgactaatccgatgggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagtcc 18176995  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  18176996 accgaaattggc 18177007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 26174317 - 26174190
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | ||||  |||||||||| | ||||| |    
T  26174317 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctatttaaagccagagcaagctc 26174218  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| ||| |||||||||||    
T  26174217 tgtatggacttaacccaccgaaattggc 26174190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 45272409 - 45272536
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||| || ||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  45272409 ttttttgaaaactcggtatccgatccaagagtcaactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 45272508  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
     ||||||||||||||| |||||||||||    
T  45272509 cgtatggacttagcccaccgaaattggc 45272536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 46576552 - 46576425
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||||| |||  | |||||  |||| |||||||| | | ||||||||||||||| | ||||| |    
T  46576552 ttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatccgaccgcccacttgcgggggccccgtttaaagccagagcaagctc 46576453  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||||||    
T  46576452 tgtatggacttagcccactgaaattggc 46576425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 53233904 - 53234030
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||| ||||| | ||||| |    
T  53233904 ttttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttagagccagagcaagctc 53234002  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  53234003 tgtatggacttagcccaccgaaattggc 53234030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 17579128 - 17579253
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc--agagccccgtttaaagccataacaagcg 394  Q
    ||||||||||||| ||||| |||||||| |||||||||||| ||||  | ||||||||||| ||||||||  || | |||||||||||| | | |||||     
T  17579128 ttttctgaaaactcgatattcgatccaaaaatcgactaatctgaggggaccaatctcaccgcccacttgcggagggtcccgtttaaagctaaagcaagct 17579227  T
Q  395 ctgtatggacttagcccgccgaaatt 420  Q
    ||||||||||||||||| || |||||    
T  17579228 ctgtatggacttagcccaccaaaatt 17579253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 21363140 - 21363022
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||| |||||||||| || ||||| ||||| ||||||||  | || ||||||||||||| | ||||| ||||||||    
T  21363140 aaaactcggtatccgatccaagaatcgattaatccgagggaaccaatcccaccgcccacttgcgggggctccgtttaaagccagagcaagctctgtatgg 21363041  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||  |||||||||    
T  21363040 acttagcctaccgaaattg 21363022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 31537838 - 31537958
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca-gagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| |||||||||||||||||| ||||||| |||||  | ||||||||||| ||||||||| | || ||||||||||||| |  |||| |||||| |    
T  31537838 aaaactcgatatccgatccaagaattgactaattcgaggggaccaatctcaccgcccacttgcaggggctccgtttaaagccagagtaagctctgtatag 31537937  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| || ||||||||    
T  31537938 acttagcccaccaaaattggc 31537958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 39041852 - 39041972
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||||||||   | ||||| ||||  |||||||| | | ||||||||||||||| | ||||| ||| ||||    
T  39041852 aaaactcggtatccgatccaagaatcgactaatccgagtggaccaatcccaccacccacttgcgggggccccgtttaaagccagagcaagctctgcatgg 39041951  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  39041952 acttagcccaccgaaattggc 39041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 45529748 - 45529875
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||  | ||||| ||||| |||||||| | |  |||||||||||||| | ||||| |    
T  45529748 ttttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctc 45529846  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    ||||||||||||||||  |||||||||||    
T  45529847 tgtatggacttagcccatcgaaattggct 45529875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 2511290 - 2511417
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| |||||||| |||||||| |||||| |||||| | ||||| ||||| |||||||| |||  ||||||||||| || | | ||| |    
T  2511290 ttttttgaaaacttggtatccgattcaagaatctactaattcgaggagaccaatcccaccgcccacttgcggaggtcccgtttaaagtcagagcgagctc 2511389  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||| ||||||||| |||||||||||    
T  2511390 tgtatgaacttagcccaccgaaattggc 2511417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 53288713 - 53288832
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||||| || ||||||||| ||||||||||| |||||  |  |||||||||||||  |||| | |||||||||||||||| | |||||  ||||||||    
T  53288713 aaaacttggtaaccgatccaataatcgactaattcgaggggactaatctcaccgtccgtttgcggggccccgtttaaagccaaagcaagctttgtatgga 53288812  T
Q  404 cttagcccgccgaaattggc 423  Q
    ||||| || |||||||||||    
T  53288813 cttagtccaccgaaattggc 53288832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 30257812 - 30257701
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||  ||||| ||||||||  | ||||| |||||||||| | ||||| |||||||||||||| ||    
T  30257812 tatccgatccaagaatcgactaatccgaggggaccaatgccaccgcccacttgcgggggccccatttaaagccagagcaagctctgtatggacttagtcc 30257713  T
Q  412 gccgaaattggc 423  Q
      ||||||||||    
T  30257712 atcgaaattggc 30257701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 33398477 - 33398588
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||  | |||||||||||||| | | ||||| |||||||||| || |||    
T  33398477 tatccgatccaagaatcgactaattcgagggaaccaatcccaccgcccacttgcgggggccccgtttaaagctagagcaagctctgtatggacataaccc 33398576  T
Q  412 gccgaaattggc 423  Q
     || ||||||||    
T  33398577 accaaaattggc 33398588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 422
Target Start/End: Complemental strand, 4462829 - 4462711
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | ||||| ||||||||||  |||||||||||   ||||||| |||||||||||||| | |||||||||||||| | |  |||| ||||||| |    
T  4462829 aaaactcggtatccaatccaagaataaactaatccgagtggatcaatcccaccgtccacttgcggggccccgtttaaagctagagtaagctctgtatgaa 4462730  T
Q  404 cttagcccgccgaaattgg 422  Q
    ||||||||  |||||||||    
T  4462729 cttagcccatcgaaattgg 4462711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 7485531 - 7485645
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||||| | || ||||||||||| | |||||    |||| |    
T  7485531 aaaactcggtatccgatccaagaatcgactaatccgagg-gaccaatcccaccggccacttgcaggggcctgtttaaagccagatcaagc----tatgaa 7485625  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||||||| |||||||||||    
T  7485626 cttagcccaccgaaattggc 7485645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 359 - 423
Target Start/End: Original strand, 7470271 - 7470335
Alignment:
Q  359 ccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||| |||||||||||||||| | ||||| ||||||| ||||||||| |||||||||||    
T  7470271 ccacttgcagggccccgtttaaagccagagcaagctctgtatgaacttagcccaccgaaattggc 7470335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 26108422 - 26108369
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  26108422 gccccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggc 26108369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 29915288 - 29915389
Alignment:
Q  322 caagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattg 421  Q
    ||||||||||||||| ||| |  ||||||| ||||| |||||||| | | ||||||||||||||   ||||| ||||||| ||||||||| |||||| ||    
T  29915288 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatg 29915387  T
Q  422 gc 423  Q
    ||    
T  29915388 gc 29915389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 29964441 - 29964542
Alignment:
Q  322 caagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattg 421  Q
    ||||||||||||||| ||| |  ||||||| ||||| |||||||| | | ||||||||||||||   ||||| ||||||| ||||||||| |||||| ||    
T  29964441 caagaatcgactaattcgatgggatcaatcccaccgcccacttgcgggggcccgtttaaagccagggcaagctctgtatgtacttagcccaccgaaaatg 29964540  T
Q  422 gc 423  Q
    ||    
T  29964541 gc 29964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 53848427 - 53848496
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||    
T  53848427 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgc 53848496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 404
Target Start/End: Complemental strand, 54475878 - 54475777
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||| ||||||||||||||||||||| |||  | ||||| ||||| |||||||| |  |||||||||||||||| | ||||| ||||||||    
T  54475878 aaaactcggtatctgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcggtggccccgtttaaagccaaagcaagctctgtatgg 54475779  T
Q  403 ac 404  Q
    ||    
T  54475778 ac 54475777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 34492575 - 34492695
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||| |||||||||||| ||||||| ||    | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||    
T  34492575 aaaactcggtatcagatccaagaatcaactaatctgaatggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 34492674  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||||||||  ||||||||||    
T  34492675 acttagcccaacgaaattggc 34492695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 24407458 - 24407379
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaag 382  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| |  |||||||||||||    
T  24407458 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgatggccccgtttaaag 24407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 4048147 - 4048085
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||||||| ||||||||||||  | ||||| ||||||||||||||    
T  4048147 aaaactcggtatccgatccaagaatcaactaatccgaggggaccaatcccaccgtccacttgc 4048085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 3747785 - 3747740
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgagg 342  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||    
T  3747785 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagg 3747740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 55371303 - 55371376
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagcca 385  Q
    ||||||||||||| ||||||||||||||||  | ||||| ||||| |||||||| || ||||||||| ||||||    
T  55371303 tatccgatccaaggatcgactaatccgaggggaccaatcccaccgcccacttgcgagggccccgttttaagcca 55371376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 4252405 - 4252457
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg 365  Q
    ||||||||||||| ||||||||||||||||  | ||||| |||||||||||||    
T  4252405 tatccgatccaaggatcgactaatccgaggggaccaatcccaccgtccacttg 4252457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 48105065 - 48105013
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg 365  Q
    |||||||||||||||||||||||||||| |  | ||||||||||| |||||||    
T  48105065 tatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttg 48105013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 1178374 - 1178249
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataac-aagcgc 395  Q
    |||| |||||||| | |||||||||||||| |||||||||||||||  | ||||| ||||| |||| ||  | ||||| |||||||||| | | |||  |    
T  1178374 ttttttgaaaactcggtatccgatccaagattcgactaatccgagg-gaccaatcccaccgcccacgtgtggggccccatttaaagccagagcaaagttc 1178276  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||| |||||||||||    
T  1178275 tgtatggactt-gcccaccgaaattggc 1178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 411
Target Start/End: Original strand, 52455642 - 52455757
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||| ||||||||||||||||||||||||  | ||||| ||||   |||||||  | ||||||||||||| || | ||||| |    
T  52455642 ttttttgaaaactcggtatccaatccaagaatcgactaatccgaggggaccaatcccaccagtcacttgcgggggccccgtttaaagtcagagcaagctc 52455741  T
Q  396 tgtatggacttagccc 411  Q
    ||| | ||||||||||    
T  52455742 tgtgtagacttagccc 52455757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 297 - 343
Target Start/End: Original strand, 39206149 - 39206195
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgagga 343  Q
    |||| |||||||| ||||||||||| |||||||||||||| ||||||    
T  39206149 ttttttgaaaactcgatatccgatctaagaatcgactaattcgagga 39206195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 342
Target Start/End: Complemental strand, 11390790 - 11390761
Alignment:
Q  313 tatccgatccaagaatcgactaatccgagg 342  Q
    ||||||||||||||||||||||||||||||    
T  11390790 tatccgatccaagaatcgactaatccgagg 11390761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 26158999 - 26158946
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    ||||||||||||| | ||||||||||||||  ||||||| ||||| ||||||||    
T  26158999 tatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgc 26158946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 40940955 - 40940902
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||| || | ||||| |||||||||||||| || |||||||||||    
T  40940955 gccccgtttaaagtcagagcaagctctgtatggacttagtccaccgaaattggc 40940902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 34516407 - 34516530
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||||| | |||||||||||| | | ||||| ||    
T  34516407 ttttttgaaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcaggggcccgtttaaagcgagagcaagctct 34516506  T
Q  397 gtatggacttagcccgccgaaatt 420  Q
    ||||||||||||||| ||||||||    
T  34516507 gtatggacttagcccaccgaaatt 34516530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 422
Target Start/End: Complemental strand, 35172004 - 35171878
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||| |||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  35172004 ttttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 35171905  T
Q  396 tgtatggacttagcccgccgaaattgg 422  Q
    |||||||||||||||| ||||||||||    
T  35171904 tgtatggacttagcccaccgaaattgg 35171878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 15038163 - 15038036
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||| ||||  | ||||| ||||| |||||||| | | | ||||||||||||| | ||||| |    
T  15038163 ttttttgaaaactcggtatccgatccaagaatcgactaatctgaggggaccaatcccaccgcccacttgcgggggctccgtttaaagccaaagcaagctc 15038064  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  15038063 tgtatggacttagcccaccgaaattggc 15038036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 33827566 - 33827693
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca-gagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||||| |||  | ||||| ||||| ||||||||| | | |||||||||||||| | ||||| |    
T  33827566 ttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgcccacttgcaggggtcccgtttaaagccagagcaagctc 33827665  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||  ||||||||||    
T  33827666 tgtatggacttagcccaacgaaattggc 33827693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 44946046 - 44946173
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | | |||||||||||||| | ||||  |    
T  44946046 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagttc 44946145  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  44946146 tgtatggacttagcccaccgaaattggc 44946173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 3943944 - 3943817
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| |||||||||||| || |||||||||| |||  | ||||| ||||  |||||||| | ||||||||||||||||| | ||||| |    
T  3943944 ttttttgaaaacttggtatccgatccaataaccgactaatccaaggggaccaatcccaccacccacttgcgggagccccgtttaaagccagagcaagctc 3943845  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||  |||||||||||    
T  3943844 tgtatggacttagccaaccgaaattggc 3943817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 28669077 - 28668950
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||| |||||||||||||||||  | ||||| ||||| |||||||  | | ||||||||||||||| | ||||| |    
T  28669077 ttttttgaaaactcggtatccgatccaaaaatcgactaatccgaggggaccaatcccaccgcccacttgtgggggccccgtttaaagccaaagcaagctc 28668978  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||| || |||||||||||    
T  28668977 tgtatggacttagtccaccgaaattggc 28668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 36242305 - 36242430
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||| ||| ||||||||||||||||||| ||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  36242305 ttttttgaaaatttggtatccgatccaagaatcgattaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctc 36242404  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    ||  |||||||||||| |||||||||    
T  36242405 tggctggacttagcccaccgaaattg 36242430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 11941210 - 11941330
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | | |||||||||||||| | ||||| ||||||||    
T  11941210 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggtcccgtttaaagccagagcaagctctgtatgg 11941309  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||| ||| || ||||||||    
T  11941310 acttaacccaccaaaattggc 11941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 30466830 - 30466950
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccg-tttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||||||| |  | ||||| ||| | |||||||| | | |||| |||||||||| | ||||| ||||||||    
T  30466830 aaaactcggtatccgatccaagaatcgactaatccgaagggaccaatcccactgcccacttgcgggggcccggtttaaagccagagcaagctctgtatgg 30466929  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  30466930 acttagcccaccgaaattggc 30466950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 302 - 421
Target Start/End: Complemental strand, 41314190 - 41314071
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||  | ||||| |||||||||||||| |   ||||||||||| || | ||||| ||||||     
T  41314190 tgaaaacttggtatccgatcgaagaatcgattaatctgaggggaccaatcccaccgtccacttgcgggatcccgtttaaagtcagagcaagctctgtata 41314091  T
Q  402 gacttagcccgccgaaattg 421  Q
    |||||||||| |||||||||    
T  41314090 gacttagcccaccgaaattg 41314071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 4769365 - 4769259
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||| ||||||||||||| ||||||||||||||  ||||  | ||| |||||||||||||||| | | ||||||||||||||| | ||||| ||||||    
T  4769365 tgaaaatttgatatccgatctaagaatcgactaatttgaggggaccaacctcaccgtccacttgcggggcccccgtttaaagccagagcaagctctgtat 4769266  T
Q  401 ggactta 407  Q
    |||||||    
T  4769265 ggactta 4769259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 13266686 - 13266567
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| ||||||||||||||||||||||||||  ||||  | ||||| ||    |||||||| | |||||||||||||||| | ||||| |||||||||    
T  13266686 aaaactcgatatccgatccaagaatcgactaatttgaggggaccaatcccattacccacttgcggggccccgtttaaagccagagcaagctctgtatgga 13266587  T
Q  404 cttagcccgccgaaattggc 423  Q
    ||||| || ||| |||||||    
T  13266586 cttagtccaccggaattggc 13266567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 297 - 420
Target Start/End: Complemental strand, 24196206 - 24196084
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||| ||| || |||||||||||||||||  | ||||| ||||| |||||||| | |||| ||||||||||| | ||||  ||    
T  24196206 ttttttgaaaactcggtatccaatcaaaaaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccc-gtttaaagccagagcaagttct 24196108  T
Q  397 gtatggacttagcccgccgaaatt 420  Q
    ||||||||||||||| ||||||||    
T  24196107 gtatggacttagcccaccgaaatt 24196084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 323 - 423
Target Start/End: Original strand, 44976172 - 44976274
Alignment:
Q  323 aagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag--agccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaatt 420  Q
    |||||||||||||||||| |  ||||||| ||||| |||||||| |  ||||||||||||||||| | ||| | ||||||||||||||||| || |||||    
T  44976172 aagaatcgactaatccgaagggatcaatcccaccgcccacttgcggggagccccgtttaaagccagagcaaactctgtatggacttagcccaccaaaatt 44976271  T
Q  421 ggc 423  Q
    |||    
T  44976272 ggc 44976274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 27269344 - 27269462
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||| ||||||||||||||||||||||||  ||||||| ||||| ||||||||  |||  | ||||||||||| | ||||  || |||||    
T  27269344 aaaactcggtatcctatccaagaatcgactaatccgaggggatcaatcccaccgcccacttgcgggagggctgtttaaagccagagcaagttctatatgg 27269443  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||| |||||||||    
T  27269444 acttagcccaccgaaattg 27269462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 8259085 - 8258974
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||||||| | ||  |||| ||||| | ||||||  | |||||| ||||||||| ||||||  ||||||||||||| |||    
T  8259085 tatccgatccaagaatcgactaatccgaaggaactaatcccaccgcctacttgcgggggccccgattaaagccagaacaagatctgtatggacttaaccc 8258986  T
Q  412 gccgaaattggc 423  Q
     || ||||||||    
T  8258985 accaaaattggc 8258974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 17324961 - 17324843
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| ||||||||||| ||||||||||||||  ||||  |  |||| ||||| |||||||  | | ||| |||||||||| | ||||| |||||||||    
T  17324961 aaaactcgatatccgatc-aagaatcgactaatttgaggggactaatcccaccgcccacttgtgggggcccatttaaagccagagcaagctctgtatgga 17324863  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||||||| |||||||||||    
T  17324862 cttagcccaccgaaattggc 17324843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 4567504 - 4567557
Alignment:
Q  370 gccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| ||||||| ||||||||| ||||||| |||||||||||    
T  4567504 gccccgtttaaagccagaacaagctctgtatggatttagcccaccgaaattggc 4567557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 4852726 - 4852649
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaa 381  Q
    ||||||||  |||||||||||||||||| ||||||||||  | ||||  |||||||||||||| | ||||||||||||    
T  4852726 aaaacttggcatccgatccaagaatcgattaatccgaggggaccaattccaccgtccacttgcggggccccgtttaaa 4852649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 29361745 - 29361664
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagcca 385  Q
    |||||| ||||||||||||| ||||| | ||||||||||| ||||||| ||| | |||||||| | || |||||||||||||    
T  29361745 aaaactcgatatccgatccaggaatcaattaatccgaggagatcaatcccactgcccacttgcggggctccgtttaaagcca 29361664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 41330039 - 41329920
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||| |||||||| ||||||||| ||||  | ||||||||||| |||||||   | ||||| |||||||||| | ||||| || |||||    
T  41330039 aaaactcggtatccggtccaagaaccgactaatctgaggggaccaatctcaccgcccacttgtgggggccccatttaaagccagagcaagctct-tatgg 41329941  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||||||||||| ||||||||    
T  41329940 acttagcccgccaaaattggc 41329920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 2140479 - 2140589
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc--agagccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | |||||||||||| |||||||||||||||||  | ||||| ||||| ||||||||   | | ||| |||||||||| | |||||     
T  2140479 ttttttgaaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggggggcccatttaaagccagagcaagct 2140578  T
Q  395 ctgtatggact 405  Q
    |||||||||||    
T  2140579 ctgtatggact 2140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 297 - 417
Target Start/End: Complemental strand, 19054230 - 19054108
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc--agagccccgtttaaagccataacaagcg 394  Q
    |||| |||||||| | |||| ||||||||||||||||||||||||   | ||||| ||||| ||||||||   | |  || |||||||||| | |||||     
T  19054230 ttttttgaaaactcggtatctgatccaagaatcgactaatccgagcggaccaatcccaccgcccacttgcggggggttccatttaaagccaaagcaagct 19054131  T
Q  395 ctgtatggacttagcccgccgaa 417  Q
    ||||||||||||||||| |||||    
T  19054130 ctgtatggacttagcccaccgaa 19054108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 27290716 - 27290665
Alignment:
Q  372 cccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  27290716 cccgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggc 27290665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 45271572 - 45271461
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccc-cgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||| ||| ||||||||||||||  ||||  ||||||||| |||  ||||||||| | |  |||||||||||| | ||||| |||||||||||||||||    
T  45271572 tatccaatcaaagaatcgactaatttgaggggatcaatctctccgctcacttgcaggggcttcgtttaaagccagagcaagctctgtatggacttagccc 45271473  T
Q  412 gccgaaattggc 423  Q
     | |||||||||    
T  45271472 actgaaattggc 45271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 6006890 - 6006992
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataac-aagcgctgtatgg 402  Q
    |||||| | |||| ||| |||| ||||||||||| ||||| | ||||| ||||||||||||||||||| || ||| |||| | ||| |||| ||||||||    
T  6006890 aaaactcggtatctgattcaaggatcgactaatctgaggagaccaatcacaccgtccacttgcagagctccattttaagctagaacaaagctctgtatgg 6006989  T
Q  403 act 405  Q
    |||    
T  6006990 act 6006992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 27290778 - 27290733
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgagg 342  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||    
T  27290778 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagg 27290733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 39957962 - 39957893
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||||| | ||||| |||||||||||||||||||||||| || ||||| || || ||||||||    
T  39957962 ttttttgaaaactcggtatccaatccaagaatcgactaatccgagggaaccaatcccatcgcccacttgc 39957893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 383
Target Start/End: Original strand, 6714295 - 6714375
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagc 383  Q
    |||||| | ||||| ||||||||||||||||||  ||||  | ||||||||||||||||||||  ||| ||||||||||||    
T  6714295 aaaactcggtatccaatccaagaatcgactaatttgaggggaccaatctcaccgtccacttgcgggagtcccgtttaaagc 6714375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 18692164 - 18692096
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg 365  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||| ||||| |||||||    
T  18692164 ttttttgaaaactcggtatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttg 18692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 25293356 - 25293273
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc--agagccccgtttaaagcca 385  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| || || ||||||||   | ||||||||||||||||    
T  25293356 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccatcgcccacttgcggggggccccgtttaaagcca 25293273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 422
Target Start/End: Complemental strand, 1191694 - 1191591
Alignment:
Q  320 tccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgctgtatggacttagcccgccgaaa 418  Q
    ||||||||||||||||| |||||  | ||||  |||||| ||||| | | | | ||||||||||||| | ||| | ||||||||||||||||| ||||||    
T  1191694 tccaagaatcgactaattcgaggggaacaattccaccgttcactttcggggacaccgtttaaagccagagcaaactctgtatggacttagcccaccgaaa 1191595  T
Q  419 ttgg 422  Q
    ||||    
T  1191594 ttgg 1191591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 10582059 - 10582110
Alignment:
Q  372 cccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||| | | ||||| ||||||||||||||||| |||||||||||    
T  10582059 cccgtttaaagctagagcaagctctgtatggacttagcccaccgaaattggc 10582110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 340
Target Start/End: Original strand, 43374323 - 43374366
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccga 340  Q
    |||| |||||||| | ||||||||||||||||||||||||||||    
T  43374323 ttttttgaaaactcggtatccgatccaagaatcgactaatccga 43374366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 368
Target Start/End: Complemental strand, 14487024 - 14486958
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag 368  Q
    |||||||| | ||||||||||||| | ||||||||||||||  | ||||| ||||| ||||||||||    
T  14487024 tgaaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcag 14486958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 44929846 - 44929908
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | |||||||||||||||||||||||| | |||  | ||||| ||||||||||||||    
T  44929846 aaaactcggtatccgatccaagaatcgactaattcaaggggaccaatcccaccgtccacttgc 44929908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 9400970 - 9401023
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||||||||||||||||||||||  |||||| ||||| ||| | ||||||||    
T  9400970 tatccgatccaagaatcgactaatctaaggaaaccaatcccactgcccacttgc 9401023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 18976464 - 18976517
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||||||||||||||||||||| |||||  | ||||| ||||| ||||||||    
T  18976464 tatccgatccaagaatcgactaattcgaggggaccaatcccaccgcccacttgc 18976517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 357
Target Start/End: Original strand, 12360305 - 12360349
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccg 357  Q
    ||||||||||||  ||||||||||||||||| | |||||||||||    
T  12360305 tatccgatccaaagatcgactaatccgaggagaccaatctcaccg 12360349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Complemental strand, 19517071 - 19517031
Alignment:
Q  371 ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||| | ||||| |||||||||||||||||    
T  19517071 ccccgtttaaagccaaagcaagctctgtatggacttagccc 19517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 3222629 - 3222755
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | ||||||||||||| || | ||||| ||    
T  3222629 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagacagagcaagctct 3222728  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| |||||||||||    
T  3222729 gtatggacttagcccaccgaaattggc 3222755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 654146 - 654266
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||| |||||||||||||||||  | ||||| ||||| |||||||| | ||||||||||||||||| | ||||| ||||||||    
T  654146 aaaactcggtatccgatccaataatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatgg 654245  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  654246 acttagcccaccgaaattggc 654266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 11449068 - 11448948
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| |||||||||| |||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||    
T  11449068 aaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 11448969  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  11448968 acttagcccaccgaaattggc 11448948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 15360091 - 15360218
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||| |||| | | ||||||||||||||| | ||||| |    
T  15360091 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctc 15360190  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  15360191 tgtatggacttagcccaccgaaattggc 15360218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 34147550 - 34147423
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | | |||||||||||||| | ||||| |    
T  34147550 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctc 34147451  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  34147450 tgtatggacttagcccaccgaaattggc 34147423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 34160166 - 34160039
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | | |||||||||||||| | ||||| |    
T  34160166 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggggcccgtttaaagccagagcaagctc 34160067  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  34160066 tgtatggacttagcccaccgaaattggc 34160039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 9690638 - 9690756
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||||||||||||||||||||||||   | ||||| |||||||||||||  || |||||||||||||||| | ||||| ||||||||    
T  9690638 aaaactcggtatccgatccaagaatcgactaatccgagaggaccaatcccaccgtccacttgtgagggccccgtttaaagccagagcaagctctgtatgg 9690737  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||| |||||||||    
T  9690738 acttagcccaccgaaattg 9690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 21148504 - 21148630
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | |||||||| |||||||||||||||||||||  | ||||| ||||| |||||||| | ||||||||||||| || | ||||| ||    
T  21148504 ttttttgaaaactcggtatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggccccgtttaaagtcagagcaagctct 21148603  T
Q  397 gtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||  ||||||||||    
T  21148604 gtatggacttagcccatcgaaattggc 21148630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 9844142 - 9844017
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |  | ||||||||||| |||||||   | |||||||||||||||| ||||||| |    
T  9844142 ttttatgaaaactcgatatccgatccaagaatcgactaatccgaagggaccaatctcaccgcccacttgagggggccccgtttaaagccagaacaagctc 9844043  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||| ||| || ||||||    
T  9844042 tgtatggacttaacccaccaaaattg 9844017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 21982314 - 21982440
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||| |    
T  21982314 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagg-gaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 21982412  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||||||    
T  21982413 tgtatggacttagcccactgaaattggc 21982440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 28672264 - 28672146
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||| |||||||||||||||||||||||||  | ||||| ||||| |||||||| || | |||||||||||||| ||||||| ||||||||    
T  28672264 aaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgaggggcccgtttaaagccaaaacaagctctgtatgg 28672165  T
Q  403 acttagcccgccgaaattg 421  Q
    ||||||||| || ||||||    
T  28672164 acttagcccaccaaaattg 28672146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 381
Target Start/End: Original strand, 33718469 - 33718547
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcaga-gccccgtttaaa 381  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||    
T  33718469 aaaatttgatatccgatccaagaatcgactaatccgaggggatcaatcccaccgtccacttgcagaggccccgtttaaa 33718547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 1345139 - 1345012
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||||| |||  | ||||| ||||||||||||||  | | |||||||||||||| | |||||      
T  1345139 ttttttgaaaactcggtatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcggggggcccgtttaaagccagagcaagctt 1345040  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| | |||||||||    
T  1345039 tgtatggacttagcccactgaaattggc 1345012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 9239163 - 9239052
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | ||||| |||||||||| | ||||| || |||||||||| |||    
T  9239163 tatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaagctctatatggacttaaccc 9239064  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  9239063 accgaaattggc 9239052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 423
Target Start/End: Complemental strand, 12390600 - 12390502
Alignment:
Q  326 aatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcccc-gtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||||  | ||||| ||||| |||||||| | | ||| ||||||||||| | ||||| ||||||||||||||||| |||||||||||    
T  12390600 aatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccaccgaaattggc 12390502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 17706328 - 17706401
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagcca 385  Q
    |||||||||||||||| |||| ||||||||||| ||||| |||||||||||||| || |||| |||||||||||    
T  17706328 tatccgatccaagaattgacttatccgaggaaaccaatcacaccgtccacttgcgagggcccagtttaaagcca 17706401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 302 - 421
Target Start/End: Complemental strand, 11007364 - 11007244
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | ||||||||| ||||||||||||||||||||    ||||| ||||| ||||||||  | |||||| ||||||| | | |||||  |||||    
T  11007364 tgaaaactaggtatccgatcaaagaatcgactaatccgagggggccaatcccaccgcccacttgcgggggccccgcttaaagctagagcaagctttgtat 11007265  T
Q  401 ggacttagcccgccgaaattg 421  Q
    ||||||||||| |||||||||    
T  11007264 ggacttagcccaccgaaattg 11007244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 11841097 - 11840978
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||| | |||||||||||| ||||||||||| |||||  |  |||| ||||||||||||   | |||||||||||| ||| | |||||  ||||||||    
T  11841097 aaaactcggtatccgatccaataatcgactaattcgaggggactaatcccaccgtccacttatggggccccgtttaaaaccaaagcaagctttgtatgga 11840998  T
Q  404 cttagcccgccgaaattggc 423  Q
    |||| ||| |||||||||||    
T  11840997 cttaacccaccgaaattggc 11840978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 5360071 - 5360191
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcc-ccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||| |||||||||||||| |||||  | ||||| ||||| |||||||  | |   |||||||||| || | ||||| ||||||||    
T  5360071 aaaactcggtatccgatctaagaatcgactaattcgaggggaccaatcccaccgcccacttgtgggggttccgtttaaagtcagagcaagctctgtatgg 5360170  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  5360171 acttagcccaccgaaattggc 5360191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 15730495 - 15730593
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||| ||||||||||| ||||||||||||||||||||  | ||||| ||||| |||| ||   | ||| |||||||||||| ||||||| |||||||    
T  15730495 aaaactcgatatccgatcaaagaatcgactaatccgaggtgaccaatcccaccgcccacgtgtgggggccacgtttaaagccagaacaagctctgtatg 15730593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 17081047 - 17081172
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||| ||||||||||| | ||| || |||||  | ||||| ||||| |||||||| | | |||| ||||||| || | ||||| |    
T  17081047 ttttttgaaaactcggtattcgatccaagaaacaacttattcgaggggaccaatcccaccgcccacttgcgggggccccatttaaagtcagagcaagctc 17081146  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||||||| |||||||||    
T  17081147 tgtatggacttagcccaccgaaattg 17081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Complemental strand, 12591766 - 12591714
Alignment:
Q  371 ccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||| | ||||| ||||||||||||||||| | |||||||||    
T  12591766 ccccgtttaaagccagagcaagctctgtatggacttagcccactgaaattggc 12591714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 341
Target Start/End: Complemental strand, 14213086 - 14213042
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgag 341  Q
    |||| |||||||| | |||||||||||||||||||||||||||||    
T  14213086 ttttttgaaaactcggtatccgatccaagaatcgactaatccgag 14213042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 17225863 - 17225744
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataac-aagcgctgtatgg 402  Q
    |||||| ||||||||||| ||| | ||||||||| ||||| ||||||| ||||| ||| |||| | ||||||||  || | | | | |||| ||||||||    
T  17225863 aaaactcgatatccgatctaaggaccgactaatctgaggagatcaatcccaccgcccatttgcggggccccgttctaaacgagagcaaagctctgtatgg 17225764  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||| ||||||||||||||||    
T  17225763 actt-gcccgccgaaattggc 17225744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 423
Target Start/End: Complemental strand, 9208435 - 9208329
Alignment:
Q  318 gatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaa-gcgctgtatggacttagcccgccg 415  Q
    ||||||||||||||||| || ||||| | ||||| ||||| ||||||||  | ||||| |||||||||| | ||| || |||||||||||| |||| |||    
T  9208435 gatccaagaatcgactattctgaggagaccaatcccaccgcccacttgcgggggccccatttaaagccaaagcaaggctctgtatggactt-gcccaccg 9208337  T
Q  416 aaattggc 423  Q
    ||||||||    
T  9208336 aaattggc 9208329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 24122220 - 24122100
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | ||||||||||||||||| | ||||| ||||||||    
T  24122220 aaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggagccccgtttaaagccagagcaagctctgtatgg 24122121  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  24122120 acttagcccaccgaaattggc 24122100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 4621230 - 4621357
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  4621230 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcggggaccccgtttaaagccagagcaagctc 4621329  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  4621330 tgtatggacttagcccaccgaaattggc 4621357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 15059395 - 15059522
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||  | ||||||||||| |||||||| | | ||||||||||||||| | ||||| |    
T  15059395 ttttttgaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatctcaccgcccacttgcggggaccccgtttaaagccagagcaagctc 15059494  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  15059495 tgtatggacttagcccaccgaaattggc 15059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 9500355 - 9500475
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| |||||||||||||||||||||||||||||| || | ||||||||||| |||||||   | || ||||||||||||| | ||||| ||||||||    
T  9500355 aaaactcgatatccgatccaagaatcgactaatccgaagagaccaatctcaccgcccacttgtgggggctccgtttaaagccagagcaagctctgtatgg 9500454  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  9500455 acttagcccaccgaaattggc 9500475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 421
Target Start/End: Complemental strand, 1379085 - 1378977
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccg 412  Q
    ||||||||| ||||||||||||||| ||||  | |||||||||||||||||||| | | |||||||||||||| | ||||  |||||||||||||||||     
T  1379085 tatccgatctaagaatcgactaatctgaggggaccaatctcaccgtccacttgcgggggcccgtttaaagccagagcaagttctgtatggacttagccca 1378986  T
Q  413 ccgaaattg 421  Q
    |||||||||    
T  1378985 ccgaaattg 1378977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 420
Target Start/End: Original strand, 7766720 - 7766844
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||  | ||||| ||||| ||||||||  | ||||||||||||| || | ||||| |    
T  7766720 ttttttgaaaactcgatatccgattcaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagtcagagcaagctc 7766819  T
Q  396 tgtatggacttagcccgccgaaatt 420  Q
    |||||||||||||||| ||||||||    
T  7766820 tgtatggacttagcccaccgaaatt 7766844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 24674581 - 24674470
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||| |||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |||||||||||||||||    
T  24674581 tatccgatccaagaatcgactaatacgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatggacttagccc 24674482  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  24674481 accgaaattggc 24674470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 23734321 - 23734193
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||  | |||| |||||| |||||||| | |  |||||||||||| |||| ||| |     
T  23734321 ttttttgaaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaact 23734222  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||| |||||||||||    
T  23734221 ctgtatggacttagcccaccgaaattggc 23734193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 23741513 - 23741385
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag--ccccgtttaaagccataacaagcg 394  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||  | |||| |||||| |||||||| | |  |||||||||||| |||| ||| |     
T  23741513 ttttttgaaaacttggtatccgattcaagaatcgactaatctgaggggaccaatttcaccgcccacttgcggggggccccgtttaaaggcatagcaaact 23741414  T
Q  395 ctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||||||||| |||||||||||    
T  23741413 ctgtatggacttagcccaccgaaattggc 23741385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 45331621 - 45331740
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag--agccccgtttaaagccataacaagcgctgtatg 401  Q
    |||||| | |||||||| |||||||||| ||||| ||||  || |||| |||||||||||||| |  ||||||||||||||||| | ||||| |||||||    
T  45331621 aaaactcggtatccgattcaagaatcgattaatctgaggggattaatcccaccgtccacttgcggggagccccgtttaaagccaaagcaagctctgtatg 45331720  T
Q  402 gacttagcccgccgaaattg 421  Q
    |||||||||| |||||||||    
T  45331721 gacttagcccaccgaaattg 45331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 7578613 - 7578486
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||| |||| |||||||||||| || ||||| ||||  |||||||| || ||||||||||||| || | |||||      
T  7578613 ttttttgaaaactcggtatccgatccaaaaatcaactaatccgagggaaccaatcccaccacccacttgcgagggccccgtttaaagtcagagcaagctt 7578514  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  7578513 tgtatggacttagcccaccgaaattggc 7578486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 17935957 - 17935846
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||||||||||||||||||||   | ||||| || || |||||||| | | ||||||||||||||| | ||| | |||||||||||||||||    
T  17935957 tatccgatccaagaatcgactaatccgagtggaccaatcccatcgcccacttgcgggggccccgtttaaagccagagcaaactctgtatggacttagccc 17935858  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  17935857 accgaaattggc 17935846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 27454857 - 27454986
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc---agagccccgtttaaagccataacaagc 393  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| |||| |||    | | |||||||||||||| | |||||    
T  27454857 ttttttgaaaactaggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacatgcggggggggcccgtttaaagccagagcaagc 27454956  T
Q  394 gctgtatggacttagcccgccgaaattggc 423  Q
     ||||||||||||||| | |||||||||||    
T  27454957 tctgtatggacttagctcaccgaaattggc 27454986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 30677375 - 30677253
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| |||||||| |||||||| ||||||||| ||||  | ||||| ||||| |||||||| | |  ||| |||||||||| | ||||| ||||||    
T  30677375 tgaaaactcgatatccggtccaagaaccgactaatctgaggggaccaatcccaccgcccacttgcgggggtcccatttaaagccaaagcaagctctgtat 30677276  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||||||||||    
T  30677275 ggacttagcccaccgaaattggc 30677253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 46608009 - 46607887
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| ||||||||||||||| | ||||||||||||||  ||||||| ||||| ||||||||  | |  || ||||||| || | ||||| ||||||    
T  46608009 tgaaaactcgatatccgatccaaggaccgactaatccgaggggatcaatcccaccgcccacttgcgggggggccttttaaagtcagagcaagctctgtat 46607910  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||||||||||    
T  46607909 ggacttagcccaccgaaattggc 46607887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 8254745 - 8254870
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||| ||||||||||||||| | |||  ||||||| ||||| ||||||||  | |||||||||||||||| | ||||  |    
T  8254745 ttttttgaaaactcggtatccgattcaagaatcgactaattcaaggggatcaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagttc 8254844  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||| ||||||||| |||||||||    
T  8254845 tgtatgaacttagcccaccgaaattg 8254870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 33905503 - 33905628
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| |||||||||  |||  ||||  ||||||| |||||||||||| | ||| ||||||||||||||| ||||| | |    
T  33905503 ttttttgaaaactcggtatccgatcaaagaatcgataaatttgaggggatcaatcccaccgtccacttacggaggccccgtttaaagccagaacaaactc 33905602  T
Q  396 tgtatggacttagcccgccgaaattg 421  Q
    |||||||||||| ||| |||||||||    
T  33905603 tgtatggacttaacccaccgaaattg 33905628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 7197247 - 7197366
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca-gagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||| ||||||||||||||||||  | ||||||||||| ||||||||| | ||| |||||||||||| | ||||  |||||| |    
T  7197247 aaaactcggtatccgatccatgaatcgactaatccgaggggaccaatctcaccgcccacttgcaggggcctcgtttaaagccagagcaaggtctgtattg 7197346  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||| ||| |||||||||||    
T  7197347 actta-cccaccgaaattggc 7197366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 18647041 - 18646930
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgca-gagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||| ||||||||||||||| |||||  ||||||||||||| |||||| || | || ||||||||||||| | ||| |  ||||| ||||||||||    
T  18647041 tatccgattcaagaatcgactaattcgaggggatcaatctcaccgcccacttacaggggctccgtttaaagccagagcaaactttgtatagacttagccc 18646942  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  18646941 accgaaattggc 18646930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 168405 - 168278
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag-agccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||||| |||||| || |||||   ||||||||||||  | ||||| ||||| ||||| || | || ||||||||||| || ||||||| |    
T  168405 ttttttgaaaacttggtatccggtctaagaactaactaatccgaggggaccaatcccaccggccactagcgggagtcccgtttaaagtcagaacaagctc 168306  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||| ||||||||| |||||||||||    
T  168305 tgtatgaacttagcccaccgaaattggc 168278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 32729748 - 32729622
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||  | |||||||||| |||  ||||||| ||||| |||||||| | | |||| |||||||||| | ||||| |    
T  32729748 ttttttgaaaactcggtatccgatccaaagaccgactaatccaaggggatcaatcccaccgcccacttgcggggaccccatttaaagccagagcaagctc 32729649  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||| |||| |||||||||||    
T  32729648 tgtatggactt-gcccaccgaaattggc 32729622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 32930937 - 32930838
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||| ||| ||||||||| ||||| ||||  ||||||| |||| ||||||||||| | ||||||||||||||| | ||||| ||| |||||||||||||    
T  32930937 tatccaatctaagaatcgattaatctgaggggatcaatcccaccatccacttgcagggaccccgtttaaagccagagcaagctctgcatggacttagccc 32930838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 403
Target Start/End: Complemental strand, 34778527 - 34778436
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgga 403  Q
    |||||||||||||||||||||||||| |||  | ||||| ||||||||||||||  | |||||||||||||||| | ||| | |||||||||    
T  34778527 tatccgatccaagaatcgactaatccaaggggaccaatcccaccgtccacttgcgggggccccgtttaaagccaaagcaaactctgtatgga 34778436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 8077832 - 8077724
Alignment:
Q  315 tccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagcccc-gtttaaagccataacaagcgctgtatggacttagcccgc 413  Q
    |||||||||| |||||| ||||| ||||  | ||||| ||||| |||||||| | | ||| ||||||||||| | ||||| ||||||||||||||||| |    
T  8077832 tccgatccaataatcgattaatc-gaggggaccaatcccaccgcccacttgcgggggccctgtttaaagccagagcaagctctgtatggacttagcccac 8077734  T
Q  414 cgaaattggc 423  Q
    ||||||||||    
T  8077733 cgaaattggc 8077724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 18533724 - 18533844
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||||| ||||||||| ||||||||| ||||  ||||  | ||||| ||| | |||||||||| | |||||||||||| || ||||||| || |||||    
T  18533724 aaaacttggtatccgatctaagaatcgattaatatgaggggaccaatcccacggcccacttgcaggggccccgtttaaagtcagaacaagctctatatgg 18533823  T
Q  403 acttagcccgccgaaattggc 423  Q
    |||||| ||  ||||||||||    
T  18533824 acttagtccatcgaaattggc 18533844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 366
Target Start/End: Complemental strand, 48699958 - 48699894
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||||| |||||||||||||||||||||||||||||| |  | ||||| ||||| ||||||||    
T  48699958 tgaaaactcgatatccgatccaagaatcgactaatccgaagggaacaatcccaccgcccacttgc 48699894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 381
Target Start/End: Complemental strand, 27159284 - 27159205
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaa 381  Q
    |||||||| ||||||||||||||  ||||||||||| ||||  | ||||| |||||||||||||| | | ||||||||||    
T  27159284 tgaaaactcgatatccgatccaaagatcgactaatctgaggggaccaatcccaccgtccacttgcgggggcccgtttaaa 27159205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 45859052 - 45859163
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    |||||||||||| |||| ||||||||||||  | |||||  |||  ||||||||  | |||| ||||||||| | | |||||| ||||||||||||||||    
T  45859052 tatccgatccaataatcaactaatccgaggggaccaatcctaccacccacttgcgggggccctgtttaaagcaagagcaagcgatgtatggacttagccc 45859151  T
Q  412 gccgaaattggc 423  Q
     |||||||||||    
T  45859152 accgaaattggc 45859163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 35138185 - 35138123
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||||| | ||||||||||||| | |||||||||||||| |||||||| ||||| ||||||||    
T  35138185 aaaactcggtatccgatccaaggaccgactaatccgagggaatcaatcccaccgcccacttgc 35138123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 421
Target Start/End: Original strand, 8779745 - 8779854
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttg-cagagccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||| ||||||||||||||||||||  | ||||| ||||| | |||||   | |||||||||||||| | |  ||||  ||||||||||||||||    
T  8779745 tatccgatctaagaatcgactaatccgaggggaccaatcccaccgcctacttgtgggggccccgtttaaagctagagtaagctgtgtatggacttagccc 8779844  T
Q  412 gccgaaattg 421  Q
     |||||||||    
T  8779845 accgaaattg 8779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 14604000 - 14603955
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgagg 342  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||    
T  14604000 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagg 14603955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 423
Target Start/End: Complemental strand, 7946997 - 7946921
Alignment:
Q  347 caatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattggc 423  Q
    ||||||||||  |||||||| | ||||| |||||||| | | ||||| |||||| |||||||||| |||||||||||    
T  7946997 caatctcaccacccacttgcggggccccatttaaagcgagagcaagctctgtatagacttagcccaccgaaattggc 7946921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 368
Target Start/End: Complemental strand, 16899687 - 16899636
Alignment:
Q  317 cgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcag 368  Q
    ||||||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  16899687 cgatccaaggaccgactaatccgaggggaccaatctcaccgtccacttgcag 16899636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 366
Target Start/End: Complemental strand, 23041724 - 23041657
Alignment:
Q  299 ttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc 366  Q
    |||| |||||| | |||||||||||||||||||||||| |||||  | ||||| ||| ||||||||||    
T  23041724 ttcttaaaactcggtatccgatccaagaatcgactaattcgaggggaccaatcccactgtccacttgc 23041657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 385
Target Start/End: Original strand, 25496493 - 25496573
Alignment:
Q  303 gaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagcca 385  Q
    ||||| ||||||||||||||||| |  |||||||| | |||  |||||| |||||||||||||| ||||||| ||| ||||||    
T  25496493 gaaaatttgatatccgatccaagtacagactaatcagggga--tcaatcccaccgtccacttgcggagccccattttaagcca 25496573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 16986291 - 16986320
Alignment:
Q  305 aaacttgatatccgatccaagaatcgacta 334  Q
    ||||||||||||||||||||||||||||||    
T  16986291 aaacttgatatccgatccaagaatcgacta 16986320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 342
Target Start/End: Original strand, 40145890 - 40145919
Alignment:
Q  313 tatccgatccaagaatcgactaatccgagg 342  Q
    ||||||||||||||||||||||||||||||    
T  40145890 tatccgatccaagaatcgactaatccgagg 40145919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 37351462 - 37351534
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagcca 385  Q
    ||||||||||||| | ||||||||||||||  | ||||| ||||| |||||||  | | ||||||||||||||    
T  37351462 tatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgtgggggcccgtttaaagcca 37351534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 7309 - 7429
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||||| ||||||||||||||||||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| |  |||| ||||||||    
T  7309 aaaacttggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagaaagctctgtatgg 7408  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  7409 acttagcccaccgaaattggc 7429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 5075 - 5202
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||  | ||||| ||||| ||| |||| | | ||||||||||||||| | ||||| |    
T  5075 ttttttgaaaactcggtatccgatccaagaatcgactaatccgaggggaccaatcccaccgcccatttgcgggggccccgtttaaagccagagcaagctc 5174  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  5175 tgtatggacttagcccaccgaaattggc 5202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 40528 - 40402
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||||||||||||||||||||||||| |  ||||| ||||| |||||||| | | ||||||||||||||| | ||||| |    
T  40528 ttttttgaaaactcggtatccgatccaagaatcgactaatccgagggac-caatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctc 40430  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  40429 tgtatggacttagcccaccgaaattggc 40402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 302 - 423
Target Start/End: Complemental strand, 39291 - 39169
Alignment:
Q  302 tgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtat 400  Q
    |||||||| | |||| |||||||||||||||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| ||||||  ||||||    
T  39291 tgaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagaacaagttctgtat 39192  T
Q  401 ggacttagcccgccgaaattggc 423  Q
    |||| |||||| |||||||||||    
T  39191 ggacatagcccaccgaaattggc 39169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 9293 - 9420
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| |||||||||||||| |||||  | ||||| |||||||||||||| | | |||| |||||||||| | ||||| |    
T  9293 ttttttgaaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctc 9391  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    |||||||||||||||| ||||||||||||    
T  9392 tgtatggacttagcccaccgaaattggct 9420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 322 - 424
Target Start/End: Original strand, 12019 - 12121
Alignment:
Q  322 caagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgctgtatggacttagcccgccgaaattg 421  Q
    ||||||| ||||||| |||||  | ||||| |||||||||||||  | ||||| |||||||||| | ||||| ||||||||||||||||| |||||||||    
T  12019 caagaattgactaattcgaggggaccaatcccaccgtccacttgtggggccccatttaaagccagagcaagctctgtatggacttagcccaccgaaattg 12118  T
Q  422 gct 424  Q
    |||    
T  12119 gct 12121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 10688 - 10814
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccccgtttaaagccataacaagcgct 396  Q
    |||| |||||||| | ||||||||| |||||| ||||||| |||||  | ||||| |||||||||||||  | ||||| |||||||||| | ||||| ||    
T  10688 ttttttgaaaactcggtatccgatc-aagaattgactaattcgaggggaccaatcccaccgtccacttgtggggccccatttaaagccagagcaagctct 10786  T
Q  397 gtatggacttagcccgccgaaattggct 424  Q
    ||||||||||||||| ||||||||||||    
T  10787 gtatggacttagcccaccgaaattggct 10814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 162013 - 161886
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||| |||||||||||||||||||||||||  | ||||| ||||| ||||||||  | ||||| || ||||||| | ||||| |    
T  162013 ttttttgaaaactcggtatctgatccaagaatcgactaatccgaggggaccaatcccaccgcccacttgcgggggccccattaaaagccagagcaagctc 161914  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||||||||||| |||||||||||    
T  161913 tgtatggacttagcccaccgaaattggc 161886  T

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Target: scaffold0623 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 424
Target Start/End: Original strand, 1057 - 1177
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||| |||||||||||||| |||||  | ||||| |||||||||||||| | | |||| |||||||||| | ||||| ||||||||    
T  1057 aaaactcggtatccgatc-aagaatcgactaattcgaggggaccaatcccaccgtccacttgcgggggccccatttaaagccagagcaagctctgtatgg 1155  T
Q  403 acttagcccgccgaaattggct 424  Q
    ||||||||| ||||||||||||    
T  1156 acttagcccaccgaaattggct 1177  T

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Target: scaffold0328 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 13047 - 13164
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | ||||||||||||||||| ||||||| ||||  ||||||| ||||||||||||||  | |||||||||||||   || ||||| ||||||||    
T  13047 aaaactcggtatccgatccaagaatcaactaatctgaggggatcaatcccaccgtccacttgcgggggccccgtttaaag---tagcaagctctgtatgg 13143  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||| ||| |||||||||||    
T  13144 acttaacccaccgaaattggc 13164  T

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Target: scaffold0328; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 305 - 420
Target Start/End: Complemental strand, 15186 - 15071
Alignment:
Q  305 aaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcgctgtatgga 403  Q
    ||||||| |||||||||||||||| |||||||||||||| | ||||| | ||| ||||||||  | | ||| |||||||||| | ||||| ||| |||||    
T  15186 aaacttgttatccgatccaagaattgactaatccgaggagaccaatc-ccccgcccacttgcggggggcccatttaaagccagagcaagctctggatgga 15088  T
Q  404 cttagcccgccgaaatt 420  Q
    |||| ||| ||||||||    
T  15087 cttaacccaccgaaatt 15071  T

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Target: scaffold0016 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 32491 - 32364
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagccc-cgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | ||||||||| ||||||||||||||||||||  | ||||| ||||  |||||||| | | || | |||||||||| | ||||| |    
T  32491 ttttttgaaaactcggtatccgatc-aagaatcgactaatccgaggggaccaatcccaccacccacttgcgggggccacatttaaagccagagcaagctc 32393  T
Q  396 tgtatggacttagcccgccgaaattggct 424  Q
    |||||||||||||||| ||||||||||||    
T  32392 tgtatggacttagcccaccgaaattggct 32364  T

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Target: scaffold0051 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 52864 - 52991
Alignment:
Q  297 ttttctgaaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgc 395  Q
    |||| |||||||| | |||||||| ||||||||||||||||||||   | |||||  |||| |||| ||| | | ||||||||||||||| | ||||| |    
T  52864 ttttttgaaaactcggtatccgattcaagaatcgactaatccgagaggaccaatcctaccgcccacctgcgggggccccgtttaaagccagagcaagctc 52963  T
Q  396 tgtatggacttagcccgccgaaattggc 423  Q
    |||||||| || |||| |||||||||||    
T  52964 tgtatggattttgcccaccgaaattggc 52991  T

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Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 313 - 422
Target Start/End: Original strand, 41654 - 41763
Alignment:
Q  313 tatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatggacttagccc 411  Q
    ||||||||| ||||||||||||||||||||  | ||||| ||  | |||||||||| | ||||||||||||||| | ||||| ||||||||||||||| |    
T  41654 tatccgatc-aagaatcgactaatccgaggggaccaatcccattgcccacttgcaggggccccgtttaaagccagagcaagctctgtatggacttagcac 41752  T
Q  412 gccgaaattgg 422  Q
      |||||||||    
T  41753 aacgaaattgg 41763  T

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Target: scaffold1175 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 411
Target Start/End: Original strand, 2426 - 2534
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagag-ccccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||||| |||| |  |||||||||||||  | ||||| ||||| |||||||| | | ||||||||||||||| | ||||| ||||||||    
T  2426 aaaactcggtatccgattcaaggacggactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagctctgtatgg 2525  T
Q  403 acttagccc 411  Q
    |||||||||    
T  2526 acttagccc 2534  T

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Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 411
Target Start/End: Complemental strand, 20418 - 20311
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||| ||||||||| |||||||||||| | |||||| | |||| |||||||| | |  |||||||||||||| | |||||  |||||||    
T  20418 aaaactcggtatccggtccaagaattgactaatccgag-agatcaattttaccgcccacttgcgggggtcccgtttaaagccagagcaagctatgtatgg 20320  T
Q  403 acttagccc 411  Q
    |||||||||    
T  20319 acttagccc 20311  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 423
Target Start/End: Original strand, 97366 - 97486
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgcagagc-cccgtttaaagccataacaagcgctgtatgg 402  Q
    |||||| | |||||| ||||| || |||||||| ||||   | ||||| ||||| |||||||| | |  ||||||||||| || | ||||| ||||||||    
T  97366 aaaactcggtatccggtccaaaaaccgactaatacgagaggaccaatcccaccgcccacttgcgggggtcccgtttaaagtcagagcaagctctgtatgg 97465  T
Q  403 acttagcccgccgaaattggc 423  Q
    ||||||||| |||||||||||    
T  97466 acttagcccaccgaaattggc 97486  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 2478 - 2514
Alignment:
Q  305 aaacttgatatccgatccaagaatcgactaatccgag 341  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  2478 aaactcgatatccgattcaagaatcgactaatccgag 2514  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 394
Target Start/End: Complemental strand, 66951 - 66860
Alignment:
Q  304 aaaacttgatatccgatccaagaatcgactaatccgaggaaatcaatctcaccgtccacttgc-agagccccgtttaaagccataacaagcg 394  Q
    |||||| | ||||||||||||| | ||||||||||||||  | ||||| ||||| ||||||||  | |||||||||||||||| | ||||||    
T  66951 aaaactcggtatccgatccaaggaccgactaatccgaggggaccaatcccaccgcccacttgcgggggccccgtttaaagccagagcaagcg 66860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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