View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13955_low_31 (Length: 424)

Name: NF13955_low_31
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13955_low_31
NF13955_low_31
[»] chr3 (55 HSPs)
chr3 (244-383)||(38566490-38566629)
chr3 (19-208)||(52520678-52520864)
chr3 (79-208)||(43786925-43787054)
chr3 (19-215)||(46352631-46352824)
chr3 (21-213)||(272219-272408)
chr3 (21-214)||(49893330-49893520)
chr3 (79-217)||(10617278-10617416)
chr3 (82-213)||(6842676-6842807)
chr3 (22-208)||(39074419-39074601)
chr3 (79-204)||(858643-858768)
chr3 (22-190)||(48725271-48725436)
chr3 (79-202)||(53489833-53489956)
chr3 (79-208)||(4168237-4168366)
chr3 (83-208)||(43269742-43269867)
chr3 (79-187)||(20924046-20924154)
chr3 (19-205)||(18014669-18014852)
chr3 (79-208)||(40362583-40362712)
chr3 (79-184)||(41553967-41554072)
chr3 (79-197)||(2505403-2505521)
chr3 (79-205)||(33140939-33141065)
chr3 (82-208)||(42964252-42964378)
chr3 (79-184)||(42548149-42548254)
chr3 (79-206)||(41304059-41304184)
chr3 (79-202)||(50359195-50359318)
chr3 (84-205)||(49529274-49529393)
chr3 (79-208)||(2938043-2938172)
chr3 (79-208)||(7468465-7468592)
chr3 (79-208)||(11308214-11308342)
chr3 (79-183)||(13159951-13160055)
chr3 (83-184)||(28139367-28139468)
chr3 (79-183)||(50298973-50299077)
chr3 (79-178)||(29241691-29241790)
chr3 (79-181)||(22248940-22249042)
chr3 (79-179)||(41993652-41993751)
chr3 (79-173)||(2119485-2119577)
chr3 (84-190)||(38852276-38852382)
chr3 (79-184)||(24488420-24488525)
chr3 (79-208)||(52246636-52246765)
chr3 (79-183)||(31514845-31514948)
chr3 (100-187)||(52552549-52552635)
chr3 (79-208)||(50395566-50395694)
chr3 (87-152)||(2362893-2362958)
chr3 (79-156)||(21010051-21010124)
chr3 (22-63)||(27994445-27994486)
chr3 (86-124)||(6842604-6842642)
chr3 (21-61)||(29247264-29247304)
chr3 (21-64)||(41304004-41304047)
chr3 (22-64)||(4168183-4168225)
chr3 (82-120)||(6842636-6842674)
chr3 (101-183)||(25743887-25743967)
chr3 (22-64)||(52246582-52246624)
chr3 (28-61)||(23516588-23516621)
chr3 (174-206)||(3735194-3735226)
chr3 (20-64)||(40362724-40362768)
chr3 (22-58)||(43786871-43786907)
[»] chr7 (57 HSPs)
chr7 (79-208)||(24798406-24798535)
chr7 (19-213)||(29993485-29993676)
chr7 (80-216)||(24438532-24438668)
chr7 (20-207)||(18485959-18486143)
chr7 (19-184)||(4628563-4628725)
chr7 (79-191)||(47839546-47839658)
chr7 (79-205)||(42044300-42044425)
chr7 (20-208)||(12218440-12218624)
chr7 (20-208)||(34333282-34333466)
chr7 (79-214)||(5239339-5239474)
chr7 (79-190)||(45045824-45045935)
chr7 (79-208)||(18117197-18117325)
chr7 (79-208)||(34606315-34606444)
chr7 (80-208)||(525079-525206)
chr7 (79-179)||(8754617-8754717)
chr7 (82-189)||(23363189-23363296)
chr7 (79-181)||(30810709-30810811)
chr7 (79-185)||(43594062-43594168)
chr7 (79-208)||(11686326-11686456)
chr7 (79-206)||(1737034-1737160)
chr7 (85-184)||(7689227-7689326)
chr7 (79-184)||(13064903-13065009)
chr7 (79-181)||(28587963-28588065)
chr7 (79-208)||(37674109-37674236)
chr7 (79-181)||(47083109-47083211)
chr7 (79-184)||(33636506-33636611)
chr7 (79-184)||(47657034-47657137)
chr7 (97-206)||(28262098-28262207)
chr7 (80-177)||(22739878-22739976)
chr7 (79-149)||(27456175-27456245)
chr7 (19-152)||(34546373-34546503)
chr7 (79-208)||(5729400-5729529)
chr7 (79-180)||(46716692-46716793)
chr7 (79-158)||(18469993-18470071)
chr7 (79-149)||(37631604-37631674)
chr7 (79-179)||(29835735-29835836)
chr7 (109-197)||(23357724-23357812)
chr7 (100-159)||(47118041-47118100)
chr7 (20-63)||(6097334-6097377)
chr7 (79-156)||(36437431-36437507)
chr7 (79-186)||(4087677-4087783)
chr7 (139-205)||(38128406-38128472)
chr7 (79-179)||(4100557-4100656)
chr7 (87-167)||(13556474-13556553)
chr7 (79-122)||(3021945-3021988)
chr7 (79-178)||(18220704-18220802)
chr7 (79-158)||(20116944-20117022)
chr7 (22-61)||(30703689-30703728)
chr7 (20-63)||(32805536-32805579)
chr7 (22-60)||(24438477-24438515)
chr7 (25-63)||(30924136-30924174)
chr7 (22-64)||(34606261-34606303)
chr7 (28-61)||(31320381-31320414)
chr7 (28-61)||(35791651-35791684)
chr7 (19-64)||(37674257-37674302)
chr7 (139-215)||(6097451-6097527)
chr7 (174-206)||(21869405-21869437)
[»] chr4 (66 HSPs)
chr4 (22-213)||(54897308-54897496)
chr4 (79-208)||(16536102-16536231)
chr4 (19-204)||(789537-789719)
chr4 (79-213)||(12356298-12356432)
chr4 (19-208)||(29591186-29591372)
chr4 (79-208)||(4089196-4089325)
chr4 (79-208)||(36395153-36395282)
chr4 (79-208)||(32202484-32202612)
chr4 (79-208)||(33108676-33108805)
chr4 (21-215)||(4268818-4269009)
chr4 (22-208)||(32217045-32217227)
chr4 (18-171)||(15186239-15186389)
chr4 (79-205)||(43944561-43944686)
chr4 (79-184)||(50619140-50619245)
chr4 (79-179)||(19503137-19503237)
chr4 (79-214)||(6164147-6164282)
chr4 (79-178)||(30387167-30387266)
chr4 (79-178)||(39843961-39844060)
chr4 (79-208)||(7768992-7769121)
chr4 (21-205)||(18067885-18068066)
chr4 (20-208)||(43202387-43202571)
chr4 (79-200)||(46148993-46149114)
chr4 (87-213)||(31680463-31680587)
chr4 (79-213)||(5091610-5091742)
chr4 (97-216)||(39877242-39877363)
chr4 (79-190)||(42898765-42898878)
chr4 (79-208)||(54655880-54656008)
chr4 (79-215)||(30154159-30154295)
chr4 (79-178)||(3783534-3783633)
chr4 (85-208)||(16820912-16821035)
chr4 (79-205)||(4220249-4220374)
chr4 (79-208)||(55882737-55882865)
chr4 (19-202)||(47231881-47232061)
chr4 (79-202)||(53655887-53656010)
chr4 (79-181)||(37987989-37988091)
chr4 (79-213)||(54945778-54945910)
chr4 (79-180)||(52533816-52533917)
chr4 (79-183)||(24679671-24679774)
chr4 (79-180)||(28755674-28755774)
chr4 (79-184)||(41265513-41265617)
chr4 (79-152)||(46688264-46688337)
chr4 (90-208)||(50603292-50603411)
chr4 (79-167)||(49915213-49915301)
chr4 (79-184)||(31517219-31517325)
chr4 (79-152)||(54054602-54054675)
chr4 (100-195)||(8133782-8133876)
chr4 (79-181)||(53268774-53268875)
chr4 (79-187)||(52697106-52697213)
chr4 (104-208)||(53003959-53004063)
chr4 (87-152)||(42815171-42815237)
chr4 (82-121)||(50167646-50167685)
chr4 (79-205)||(17344666-17344790)
chr4 (139-205)||(28119912-28119978)
chr4 (139-211)||(292229-292301)
chr4 (110-183)||(1432576-1432650)
chr4 (17-61)||(12701917-12701961)
chr4 (19-63)||(22225891-22225935)
chr4 (19-63)||(34151118-34151161)
chr4 (20-60)||(43944505-43944545)
chr4 (20-64)||(46688354-46688398)
chr4 (20-63)||(292112-292155)
chr4 (22-61)||(38609066-38609105)
chr4 (22-64)||(54054548-54054590)
chr4 (162-208)||(54054666-54054712)
chr4 (19-60)||(7768935-7768976)
chr4 (20-60)||(16536046-16536086)
[»] chr8 (58 HSPs)
chr8 (18-208)||(168462-168649)
chr8 (20-208)||(27988503-27988687)
chr8 (20-208)||(28045805-28045989)
chr8 (22-208)||(34228682-34228865)
chr8 (20-208)||(4537747-4537932)
chr8 (22-208)||(30675576-30675758)
chr8 (79-213)||(16888542-16888676)
chr8 (79-197)||(29444154-29444272)
chr8 (79-204)||(2805267-2805392)
chr8 (79-208)||(16890483-16890612)
chr8 (79-192)||(21595900-21596013)
chr8 (79-214)||(7304515-7304650)
chr8 (79-214)||(9537821-9537956)
chr8 (79-190)||(12203908-12204019)
chr8 (79-190)||(12448336-12448447)
chr8 (20-190)||(33357150-33357317)
chr8 (79-189)||(36730498-36730608)
chr8 (79-208)||(9063055-9063184)
chr8 (79-168)||(10870406-10870495)
chr8 (79-208)||(11112693-11112822)
chr8 (79-208)||(28626822-28626950)
chr8 (79-208)||(43119271-43119399)
chr8 (79-183)||(4648248-4648352)
chr8 (22-208)||(16394064-16394247)
chr8 (79-197)||(37373259-37373377)
chr8 (79-204)||(42034988-42035113)
chr8 (82-206)||(9253907-9254030)
chr8 (24-214)||(20831550-20831737)
chr8 (19-184)||(13643009-13643170)
chr8 (19-184)||(13743434-13743595)
chr8 (79-190)||(29235289-29235400)
chr8 (79-208)||(32113962-32114092)
chr8 (79-184)||(3930260-3930365)
chr8 (88-208)||(39406905-39407023)
chr8 (79-180)||(16785140-16785241)
chr8 (79-215)||(40831331-40831467)
chr8 (79-210)||(42433545-42433675)
chr8 (97-208)||(24843283-24843393)
chr8 (81-165)||(22956761-22956845)
chr8 (79-158)||(22451838-22451916)
chr8 (85-167)||(17467663-17467745)
chr8 (79-152)||(34192829-34192902)
chr8 (79-126)||(9278266-9278313)
chr8 (79-157)||(30933376-30933453)
chr8 (22-63)||(39751617-39751658)
chr8 (118-184)||(14191037-14191103)
chr8 (136-205)||(38843486-38843556)
chr8 (22-63)||(18955693-18955734)
chr8 (22-63)||(29566700-29566741)
chr8 (20-63)||(2490334-2490377)
chr8 (79-126)||(10618072-10618119)
chr8 (22-61)||(23722248-23722287)
chr8 (22-64)||(12652630-12652672)
chr8 (22-63)||(40267921-40267962)
chr8 (24-56)||(9254069-9254101)
chr8 (152-208)||(10618125-10618181)
chr8 (25-61)||(12506879-12506915)
chr8 (97-158)||(36057904-36057967)
[»] chr1 (75 HSPs)
chr1 (20-206)||(42769995-42770178)
chr1 (22-208)||(5694321-5694504)
chr1 (22-204)||(24178470-24178649)
chr1 (18-208)||(51065751-51065938)
chr1 (79-205)||(15227793-15227919)
chr1 (19-208)||(18043159-18043345)
chr1 (79-208)||(38162904-38163033)
chr1 (21-208)||(29657770-29657954)
chr1 (19-206)||(12072067-12072251)
chr1 (79-208)||(19031818-19031947)
chr1 (79-192)||(36446344-36446457)
chr1 (79-208)||(47010047-47010176)
chr1 (79-213)||(30294379-30294513)
chr1 (79-204)||(3784720-3784845)
chr1 (79-213)||(9266726-9266860)
chr1 (86-184)||(12306978-12307076)
chr1 (79-208)||(17333287-17333414)
chr1 (83-208)||(50128175-50128300)
chr1 (79-184)||(51368812-51368917)
chr1 (79-183)||(3097713-3097817)
chr1 (21-184)||(13961211-13961370)
chr1 (79-189)||(6770391-6770501)
chr1 (20-184)||(29683193-29683355)
chr1 (79-184)||(35985648-35985753)
chr1 (84-213)||(41730367-41730496)
chr1 (80-208)||(38701940-38702064)
chr1 (79-216)||(30657662-30657793)
chr1 (79-208)||(14350282-14350409)
chr1 (79-184)||(45431332-45431437)
chr1 (79-208)||(45449247-45449376)
chr1 (79-180)||(48071536-48071637)
chr1 (79-189)||(8472936-8473046)
chr1 (85-215)||(30217822-30217950)
chr1 (79-185)||(43286776-43286882)
chr1 (79-205)||(47532677-47532802)
chr1 (88-181)||(48383141-48383234)
chr1 (79-173)||(38335223-38335317)
chr1 (79-152)||(29210467-29210540)
chr1 (79-158)||(37503268-37503346)
chr1 (79-205)||(52431635-52431761)
chr1 (79-179)||(37315300-37315399)
chr1 (79-214)||(23473461-23473596)
chr1 (120-184)||(19010714-19010778)
chr1 (79-187)||(52749656-52749764)
chr1 (79-134)||(15282591-15282646)
chr1 (79-132)||(26228247-26228300)
chr1 (104-154)||(14881036-14881086)
chr1 (79-187)||(35700676-35700782)
chr1 (79-205)||(3838783-3838909)
chr1 (20-63)||(28726051-28726094)
chr1 (22-63)||(38595898-38595939)
chr1 (79-148)||(39497361-39497430)
chr1 (83-121)||(19011057-19011095)
chr1 (162-208)||(29210531-29210577)
chr1 (91-140)||(28481906-28481954)
chr1 (22-63)||(52702291-52702332)
chr1 (20-64)||(15227737-15227781)
chr1 (139-215)||(28725901-28725977)
chr1 (21-60)||(29210412-29210451)
chr1 (22-61)||(32092376-32092415)
chr1 (79-158)||(39081855-39081933)
chr1 (79-122)||(39912368-39912411)
chr1 (139-205)||(10679629-10679695)
chr1 (22-64)||(17333426-17333467)
chr1 (139-205)||(30664173-30664239)
chr1 (139-205)||(38595758-38595824)
chr1 (19-64)||(30657605-30657650)
chr1 (25-62)||(48383257-48383294)
chr1 (20-64)||(9266872-9266916)
chr1 (20-64)||(14350421-14350465)
chr1 (25-61)||(19940683-19940719)
chr1 (24-64)||(23473608-23473648)
chr1 (147-179)||(26228300-26228332)
chr1 (24-64)||(38702077-38702117)
chr1 (20-64)||(43286720-43286764)
[»] chr5 (38 HSPs)
chr5 (79-208)||(8787393-8787522)
chr5 (79-208)||(34650836-34650965)
chr5 (19-208)||(13661805-13661991)
chr5 (19-208)||(35132519-35132704)
chr5 (79-208)||(11957970-11958099)
chr5 (79-208)||(35504244-35504372)
chr5 (79-214)||(21547391-21547526)
chr5 (79-184)||(11846126-11846231)
chr5 (20-214)||(10054350-10054540)
chr5 (79-184)||(12506350-12506455)
chr5 (79-214)||(6283616-6283751)
chr5 (79-181)||(40564434-40564536)
chr5 (79-184)||(20175281-20175386)
chr5 (83-203)||(4268620-4268739)
chr5 (79-215)||(40057361-40057497)
chr5 (79-178)||(9721640-9721739)
chr5 (79-183)||(10956006-10956109)
chr5 (79-192)||(31909685-31909793)
chr5 (81-157)||(13470207-13470283)
chr5 (22-152)||(10069969-10070095)
chr5 (87-173)||(39066973-39067059)
chr5 (79-152)||(19647717-19647790)
chr5 (79-137)||(4837311-4837369)
chr5 (79-185)||(19436864-19436968)
chr5 (153-205)||(10955957-10956009)
chr5 (20-63)||(16972174-16972217)
chr5 (79-174)||(39069434-39069527)
chr5 (19-63)||(21945006-21945050)
chr5 (79-126)||(2619642-2619689)
chr5 (139-205)||(14214055-14214121)
chr5 (139-205)||(1383279-1383346)
chr5 (22-64)||(11958111-11958153)
chr5 (22-64)||(35504384-35504426)
chr5 (28-61)||(1919620-1919653)
chr5 (19-64)||(13470148-13470193)
chr5 (22-59)||(32188139-32188176)
chr5 (22-63)||(40608681-40608722)
chr5 (20-60)||(8787337-8787377)
[»] chr6 (48 HSPs)
chr6 (22-208)||(392096-392279)
chr6 (14-208)||(32929511-32929702)
chr6 (79-216)||(12145112-12145249)
chr6 (79-206)||(32985198-32985325)
chr6 (79-205)||(26467130-26467256)
chr6 (79-208)||(23402192-23402321)
chr6 (19-214)||(3515763-3515955)
chr6 (79-208)||(4215749-4215878)
chr6 (79-205)||(2350706-2350832)
chr6 (20-179)||(7851191-7851347)
chr6 (79-185)||(1391204-1391310)
chr6 (79-208)||(18276615-18276747)
chr6 (79-208)||(2581006-2581135)
chr6 (79-190)||(35043944-35044054)
chr6 (21-205)||(27433491-27433672)
chr6 (79-180)||(29451146-29451247)
chr6 (79-207)||(3026013-3026141)
chr6 (79-184)||(12525773-12525878)
chr6 (79-208)||(25165416-25165545)
chr6 (79-196)||(28225274-28225391)
chr6 (79-190)||(11115118-11115227)
chr6 (79-215)||(31280375-31280505)
chr6 (79-197)||(5323454-5323572)
chr6 (79-208)||(34851852-34851981)
chr6 (79-204)||(13416967-13417094)
chr6 (79-180)||(961063-961164)
chr6 (79-184)||(1840274-1840379)
chr6 (20-152)||(20897946-20898075)
chr6 (79-160)||(21878398-21878479)
chr6 (79-182)||(29978286-29978389)
chr6 (79-152)||(34477609-34477682)
chr6 (87-167)||(9661048-9661128)
chr6 (79-142)||(34396596-34396659)
chr6 (79-180)||(23629607-23629708)
chr6 (79-124)||(13529509-13529554)
chr6 (135-190)||(22417303-22417358)
chr6 (139-205)||(34706835-34706901)
chr6 (22-63)||(34712271-34712312)
chr6 (24-64)||(2350654-2350694)
chr6 (20-64)||(23402136-23402180)
chr6 (19-63)||(34706717-34706761)
chr6 (20-59)||(4215693-4215732)
chr6 (28-59)||(4215844-4215875)
chr6 (111-178)||(28564322-28564388)
chr6 (96-205)||(22021735-22021844)
chr6 (79-116)||(10431790-10431827)
chr6 (19-60)||(12525716-12525757)
chr6 (20-64)||(34396671-34396715)
[»] chr2 (55 HSPs)
chr2 (22-208)||(20552931-20553114)
chr2 (22-208)||(44587902-44588085)
chr2 (79-208)||(4381849-4381978)
chr2 (20-208)||(30486208-30486393)
chr2 (22-208)||(31438646-31438829)
chr2 (19-208)||(561521-561707)
chr2 (79-208)||(34442536-34442664)
chr2 (79-208)||(27856399-27856528)
chr2 (79-215)||(31390066-31390202)
chr2 (79-225)||(2898125-2898270)
chr2 (80-190)||(6580244-6580354)
chr2 (20-208)||(22068323-22068507)
chr2 (21-197)||(22887749-22887922)
chr2 (79-184)||(26387091-26387196)
chr2 (21-208)||(32360872-32361056)
chr2 (79-190)||(32860156-32860266)
chr2 (79-205)||(3668119-3668245)
chr2 (79-206)||(8969412-8969539)
chr2 (82-184)||(1859219-1859321)
chr2 (83-208)||(4022482-4022607)
chr2 (79-208)||(22567656-22567785)
chr2 (79-208)||(27584792-27584920)
chr2 (87-190)||(25782854-25782957)
chr2 (79-181)||(38590904-38591006)
chr2 (79-174)||(11021259-11021354)
chr2 (97-180)||(13574060-13574143)
chr2 (79-158)||(38296231-38296310)
chr2 (79-181)||(35851781-35851883)
chr2 (79-205)||(43637218-43637343)
chr2 (83-208)||(5093543-5093667)
chr2 (79-184)||(28601021-28601125)
chr2 (79-214)||(39531878-39532011)
chr2 (79-152)||(26891722-26891795)
chr2 (79-188)||(29102306-29102415)
chr2 (96-178)||(5881292-5881374)
chr2 (90-183)||(25772176-25772269)
chr2 (79-158)||(15079012-15079090)
chr2 (79-183)||(15146686-15146789)
chr2 (79-158)||(34123078-34123156)
chr2 (87-158)||(10820546-10820615)
chr2 (23-63)||(29771417-29771457)
chr2 (20-60)||(35851917-35851957)
chr2 (139-215)||(45262024-45262100)
chr2 (21-64)||(26891807-26891850)
chr2 (28-59)||(27856402-27856433)
chr2 (20-59)||(27856545-27856584)
chr2 (20-63)||(44854485-44854528)
chr2 (96-205)||(44331843-44331952)
chr2 (25-62)||(5443489-5443526)
chr2 (20-64)||(31390010-31390054)
chr2 (20-64)||(32860100-32860144)
chr2 (21-61)||(35470367-35470407)
chr2 (20-64)||(38591018-38591062)
chr2 (100-148)||(43993204-43993252)
chr2 (20-63)||(45261901-45261945)
[»] scaffold0190 (2 HSPs)
scaffold0190 (79-214)||(14950-15085)
scaffold0190 (22-64)||(14896-14938)
[»] scaffold0425 (1 HSPs)
scaffold0425 (86-213)||(10771-10898)
[»] scaffold0264 (1 HSPs)
scaffold0264 (20-184)||(22959-23120)
[»] scaffold0188 (2 HSPs)
scaffold0188 (80-208)||(6113-6241)
scaffold0188 (23-64)||(6254-6295)
[»] scaffold0113 (1 HSPs)
scaffold0113 (79-213)||(40973-41107)
[»] scaffold0524 (1 HSPs)
scaffold0524 (79-184)||(879-984)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-208)||(68293-68478)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-205)||(53691-53872)
[»] scaffold0038 (1 HSPs)
scaffold0038 (79-196)||(25772-25889)
[»] scaffold0021 (2 HSPs)
scaffold0021 (79-180)||(116258-116359)
scaffold0021 (20-64)||(116202-116246)
[»] scaffold1152 (1 HSPs)
scaffold1152 (79-179)||(732-832)
[»] scaffold0002 (1 HSPs)
scaffold0002 (79-183)||(146933-147037)
[»] scaffold0325 (1 HSPs)
scaffold0325 (79-188)||(17494-17602)
[»] scaffold0263 (1 HSPs)
scaffold0263 (79-216)||(19580-19717)
[»] scaffold0050 (2 HSPs)
scaffold0050 (79-184)||(69280-69384)
scaffold0050 (79-158)||(33735-33813)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-208)||(233918-234036)
[»] scaffold1266 (1 HSPs)
scaffold1266 (79-216)||(346-483)
[»] scaffold0674 (1 HSPs)
scaffold0674 (79-152)||(7956-8029)
[»] scaffold0549 (2 HSPs)
scaffold0549 (79-152)||(7342-7415)
scaffold0549 (162-208)||(7406-7452)
[»] scaffold0034 (1 HSPs)
scaffold0034 (79-180)||(95616-95716)
[»] scaffold0045 (2 HSPs)
scaffold0045 (79-202)||(50602-50725)
scaffold0045 (79-208)||(53360-53478)
[»] scaffold0206 (2 HSPs)
scaffold0206 (79-152)||(11029-11102)
scaffold0206 (160-208)||(10993-11040)
[»] scaffold0533 (1 HSPs)
scaffold0533 (79-122)||(5093-5136)
[»] scaffold0015 (1 HSPs)
scaffold0015 (99-158)||(74526-74585)


Alignment Details
Target: chr3 (Bit Score: 136; Significance: 8e-71; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 244 - 383
Target Start/End: Complemental strand, 38566629 - 38566490
Alignment:
Q  244 ttaattgactttttagggacctaggaacaattagctaagatgataagagcatccttcaacttaactaaaggtattgggtttgaacacaatcttataaaca 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38566629 ttaattgactttttagggacctaggaacaattagctaagatgataagagcatccttcaacttaactaaaggtattgggtttgaacacaatcttataaaca 38566530  T
Q  344 cgacaacgttaaatctctctcgaaagattgtcatccattg 383  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  38566529 cgacaatgttaaatctctctcgaaagattgtcatccattg 38566490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 52520678 - 52520864
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| |||||||||||||||||||||||    
T  52520678 aaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 52520774  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  52520775 ataataatgtcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagga 52520864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 43786925 - 43787054
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43786925 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaa 43787024  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||||| ||||||||||    
T  43787025 ccagtgccccgggggcaccggttagcagga 43787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 46352631 - 46352824
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||              ||||| |||||||||| ||||||||||||||||||||||     
T  46352631 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatacagtagttaatgcattgaaattgtgtaattaattg 46352727  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||    
T  46352728 ataataaagtcagaaacagtttccttttatggtaataattcccttttatggtatgcttaacccgtgccccggaggcaccggttagcaggacccataa 46352824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 21 - 213
Target Start/End: Original strand, 272219 - 272408
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||              |||||||||||||||| |||||||||||||||||||||||||    
T  272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatttat 272315  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccat 213  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||| |||||||||| ||||    
T  272316 aataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgcttaatcggtgccccgggggcaccggttagcaggacccat 272408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 49893330 - 49893520
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||              ||||||| |||||||| ||||||||||||||||||||| |||    
T  49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatataatagttaatgcattgaaattgtgtaattaatctat 49893426  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||| |||||| ||| |||||    
T  49893427 aataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaatcagtgccccgggggcaccggttagccggacccata 49893520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 217
Target Start/End: Complemental strand, 10617416 - 10617278
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  10617416 ttatatagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcttaa 10617317  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataatg 217  Q
    || ||| ||||| |||||| |||||||||| ||| ||||    
T  10617316 cccgtgccccgggggcaccggttagcaggacccaaaatg 10617278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 6842676 - 6842807
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  6842676 tataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaacca 6842775  T
Q  182 gtgtcccggaggcaccagttagcaggatccat 213  Q
    ||| ||||| |||| | |||||||||| ||||    
T  6842776 gtgccccgggggcagcggttagcaggacccat 6842807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 39074419 - 39074601
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| ||||||||||||||||||||||||||    
T  39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatttata 39074515  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||  |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| ||||||||||    
T  39074516 ataatgtcaaaa-cagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcagga 39074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 858643 - 858768
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  858643 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaa 858742  T
Q  179 ccagtgtcccggaggcaccagttagc 204  Q
    || ||| ||||| |||||| ||||||    
T  858743 cccgtgccccgggggcaccggttagc 858768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 48725271 - 48725436
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||| ||||||||||||||||||||              |||||||||| ||||| |||||||||||||||||||||| |||    
T  48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaa---ttatatagtaattaatgcattgaaattgtgtaattaattgata 48725367  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccgg 190  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  48725368 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgg 48725436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 53489956 - 53489833
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  53489956 ttatatagtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattctattttatggtatgcttaa 53489857  T
Q  179 ccagtgtcccggaggcaccagtta 202  Q
    ||| || ||||| |||||||||||    
T  53489856 ccaatgccccggtggcaccagtta 53489833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 4168237 - 4168366
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  4168237 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaa 4168336  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||  ||||| |||||| ||||||||||    
T  4168337 cccgtaccccgggggcaccggttagcagga 4168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 43269867 - 43269742
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||    ||||||||||||||||||||    
T  43269867 atagtagttaatgcattgaaattatgtaattaatttataataaaatcaaacacagtttccttttatagtaataattatcctttatggtatgcttaaccag 43269768  T
Q  183 tgtcccggaggcaccagttagcagga 208  Q
    || |||||||||||| ||||||||||    
T  43269767 tgccccggaggcaccggttagcagga 43269742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 20924046 - 20924154
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||||||||| |||||    
T  20924046 ttatatagtagttaattcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttaaggtaataattctcttttatggtatacttaa 20924145  T
Q  179 ccagtgtcc 187  Q
    |||||||||    
T  20924146 ccagtgtcc 20924154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 18014669 - 18014852
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||              |||||||||||||||| ||||||||||||||||||||  |    
T  18014669 aaagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaa---ttatatagtagttaatgcattgaaattgtgtaattaaact 18014765  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    |||||||| | |||||||||||||||||||| |||||||| | ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  18014766 ataataaagttaaaaacagtttccttttatgataataatttccttttatggtatgcttaatcagtgccccgggggcaccagttagca 18014852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 40362712 - 40362583
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  40362712 ttatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaa 40362613  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| || |||  |||||||||    
T  40362612 ccagtgccccgggggtaccgattagcagga 40362583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 41554072 - 41553967
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  41554072 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattattttttatggtatgcttaa 41553973  T
Q  179 ccagtg 184  Q
    | ||||    
T  41553972 caagtg 41553967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 2505403 - 2505521
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  2505403 ttatatagtagttagtgcattgaaattgtgtaattaattcataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaa 2505502  T
Q  179 ccagtgtcccggaggcacc 197  Q
    |||||| || || ||||||    
T  2505503 ccagtgccctgggggcacc 2505521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 33140939 - 33141065
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||| |||||||||    
T  33140939 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatggtaataattcccttttatgatatgcttaa 33141038  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
     ||||  |||||| ||||| |||||||    
T  33141039 tcagtaccccggaagcaccggttagca 33141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 42964378 - 42964252
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||  ||||||| ||||||||||||    
T  42964378 tatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatagtaataattcacttttatgatatgcttaacca 42964279  T
Q  182 gtgtcccggaggcaccagttagcagga 208  Q
    ||||| | | | |||| ||||||||||    
T  42964278 gtgtctcagggacaccggttagcagga 42964252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 42548149 - 42548254
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| | |||| |||||||||||||||||| |||||||||||||||||    
T  42548149 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttcattttatggtaataattcccttttatggtatgcttaa 42548248  T
Q  179 ccagtg 184  Q
    ||||||    
T  42548249 ccagtg 42548254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 41304059 - 41304184
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  41304059 ttatatagtaattaatgcattgaaattgt--aattaattgataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaa 41304156  T
Q  179 ccagtgtcccggaggcaccagttagcag 206  Q
    ||| || ||||||| |||| ||||||||    
T  41304157 ccaatgccccggagacaccggttagcag 41304184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 50359318 - 50359195
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||| ||||| |||||||||||   || ||||||||||||||    
T  50359318 ttatatagtagttaatgcattgaaattgggtaattaatatataataaagtcaaaaacagttttcttttgtggtaataattatcttctatggtatgcttaa 50359219  T
Q  179 ccagtgtcccggaggcaccagtta 202  Q
    ||||||||||||| ||||| ||||    
T  50359218 ccagtgtcccggaagcaccggtta 50359195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 205
Target Start/End: Complemental strand, 49529393 - 49529274
Alignment:
Q  84 tagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 183  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||    
T  49529393 tagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacattttccttttatggtaataatttccttttatggtatgtttaaccagt 49529294  T
Q  184 gtcccggaggcaccagttagca 205  Q
    |  |||| |||||| |||||||    
T  49529293 g--ccgggggcaccggttagca 49529274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 2938172 - 2938043
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||  |||||||||||||||||    
T  2938172 ttatatagtagttaatgcactgaaattgtgtgattaatttataataaagtcaaaaacaatttcattttatggtaataattcacttttatggtatgcttaa 2938073  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    | |||  ||||  |||||| ||||||||||    
T  2938072 cgagtaccccgagggcaccggttagcagga 2938043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 7468465 - 7468592
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||| |||||||| |||||| ||| |||||||||||||||||    
T  7468465 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagttttcttttatgataataa-tcccttttatggtatgcttaa 7468563  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
     ||||| |||||| ||||| ||||||||||    
T  7468564 tcagtgccccgga-gcaccggttagcagga 7468592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 11308342 - 11308214
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||||||||  ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  11308342 ttatataatagttaatgcattgaaataatgtaattaattgataataaaatcaaaaatagtttccttttatggtaataattcc-ttttatggtatgcttaa 11308244  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||| || ||| | ||||||  |||||||||    
T  11308243 ccaatgccccaggggcaccgattagcagga 11308214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 13159951 - 13160055
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||| |||||||||| | |||||||||||||||||    
T  13159951 ttatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaa 13160050  T
Q  179 ccagt 183  Q
     ||||    
T  13160051 tcagt 13160055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 28139367 - 28139468
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||| ||||| |||    
T  28139367 atagtagttaatgcattgaaattgtataattaatttataataaagtcaaaagcagattccttttatggtaataattcccttttatggtatacttaaacag 28139466  T
Q  183 tg 184  Q
    ||    
T  28139467 tg 28139468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 50299077 - 50298973
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||  | ||||||||| |||||    
T  50299077 ttatatagtagttaatgcactgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatgataataattcactcttatggtatacttaa 50298978  T
Q  179 ccagt 183  Q
    |||||    
T  50298977 ccagt 50298973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 29241691 - 29241790
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||| ||| ||||||| |||||||||| |||||| ||||||||||    
T  29241691 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagattctttttatgataataattccgttttatagtatgcttaa 29241790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 22248940 - 22249042
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||| |  ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||| |||||||| |    
T  22248940 ttatatagtagttattgtattgaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatagtatgcttga 22249039  T
Q  179 cca 181  Q
    |||    
T  22249040 cca 22249042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 41993751 - 41993652
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| | |||||||||||||||||||  |||||||||  |||||||||||||||||    
T  41993751 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagttaaaaacagtttccttttat-ataataattctcttttatggtatgcttaa 41993653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 2119485 - 2119577
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatg 173  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  2119485 ttatatagtagttaatgcattgaaattgagtaattaatttataataaagtcaaaaacaatttccttttat-gtaataattcc-ttttatggtatg 2119577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 38852276 - 38852382
Alignment:
Q  84 tagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 183  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||| |||||||||  |||||||||||| |||||| ||    
T  38852276 tagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttattttatgataataattcacttttatggtatgtttaacccgt 38852375  T
Q  184 gtcccgg 190  Q
    | |||||    
T  38852376 gccccgg 38852382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 24488420 - 24488525
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| |||||| ||    
T  24488420 ttatataatagttaatgcatggaaatagtgtaattaattgataataaaatcaaaaacagtttctttttatggtaataattctcttttatgatatgctgaa 24488519  T
Q  179 ccagtg 184  Q
    | ||||    
T  24488520 ctagtg 24488525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 52246636 - 52246765
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaac-agtttccttttatggtaataattccattttatggtatgctta 177  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||| |||||||| | |||  |||||| ||||||||| | ||||||||||||||||    
T  52246636 ttatatagttgttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttttttttatagtaataatttccttttatggtatgctta 52246735  T
Q  178 accagtgtcccggaggcaccagttagcagga 208  Q
    || |||| ||||   ||||||||||||||||    
T  52246736 actagtg-cccgagagcaccagttagcagga 52246765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 31514845 - 31514948
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||| | |||||| |||| |||||    
T  31514845 ttatatagtagttaatgtattaaaattgtgtaattaatttataataaaatcaaaaacaattt-tttttatagtaataatttccttttatagtatacttaa 31514943  T
Q  179 ccagt 183  Q
    |||||    
T  31514944 ccagt 31514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 52552549 - 52552635
Alignment:
Q  100 gaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcc 187  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||  |||||||||||  |||||||||||||    
T  52552549 gaaattgtgtaattaatttataataaagtcaaaaacagtat-cttttatggtaataattctcttttatggtatatttaaccagtgtcc 52552635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 50395694 - 50395566
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||| || |||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  50395694 ttatacagtagttaatgcatagaaattgtgtaattaattgataataaagtc-aaaacaatttccttttatggtaataattctcttttatgatatgattaa 50395596  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
     ||||   |||||| ||||  |||||||||    
T  50395595 tcagtacaccggagacaccgattagcagga 50395566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 2362893 - 2362958
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  2362893 tagttaatgcattgaaatagtgtaattaattgataataaaatcaaaaacagttttcttttatggta 2362958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 21010051 - 21010124
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataa 156  Q
    |||||||||||||||  |||||||||||| |||||||||||||| ||| ||||||| |||||| ||||||||||||||    
T  21010051 ttatatagtagttaa--cattgaaattgtataattaatttataa-aaagtcaaaaa-agtttctttttatggtaataa 21010124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 27994486 - 27994445
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  27994486 gggaaatgttaaccgatgcccccggggcactggttaaggata 27994445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 124
Target Start/End: Original strand, 6842604 - 6842642
Alignment:
Q  86 gtagttaatacattgaaattgtgtaattaatttataata 124  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  6842604 gtagttaatgcattgaaattgtgtaattaatttataata 6842642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 29247264 - 29247304
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  29247264 agggaaatgttaaccgatgcccccggggcaatggttaagga 29247304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 41304004 - 41304047
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||||||||| |||| |||||||| |||||||||||||    
T  41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatat 41304047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 4168183 - 4168225
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| |||| |||||| |||||||||||||||    
T  4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatat 4168225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 6842636 - 6842674
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  6842636 tataatagttaattcattgaaattgtgtaattaatttat 6842674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 25743887 - 25743967
Alignment:
Q  101 aaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 183  Q
    ||||||||||||||||| |||| ||| |||||| | ||||| |||| | ||||||||| | |||| |||||||||||||||||    
T  25743887 aaattgtgtaattaattcataa-aaagtcaaaatc-gtttcattttttagtaataatttccttttttggtatgcttaaccagt 25743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 52246582 - 52246624
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||| | |||| ||||||||||||||||||||||    
T  52246582 gggaaatgctaactggtgcctccggggcactggttaaggatat 52246624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 23516621 - 23516588
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  23516621 tgctaaccggtgcccccggggcactggttaagga 23516588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 3735226 - 3735194
Alignment:
Q  174 cttaaccagtgtcccggaggcaccagttagcag 206  Q
    |||||||||||||||||||||||| ||||||||    
T  3735226 cttaaccagtgtcccggaggcaccggttagcag 3735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 40362768 - 40362724
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||  |||| ||||||||||| ||||||||||    
T  40362768 aagggaaatgctaacccgtgcctccggggcactgattaaggatat 40362724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 43786871 - 43786907
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaa 58  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  43786871 gggaaatgctaaccggtgcctccggggcactggttaa 43786907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 24798535 - 24798406
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  24798535 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatagtatgcttaa 24798436  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||||||||||||||||    
T  24798435 ccagtgccccgggggcaccagttagcagga 24798406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 29993676 - 29993485
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||              |||||||||||||||| |||||||||||||||||||||||    
T  29993676 aaagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 29993580  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccat 213  Q
    |||||||| |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  29993579 ataataaagtcaaaatcaatttccttttatggtaataattcccttttatggtatgcttaaccagtgtcccggaggcatcggttagcaggacccat 29993485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 24438532 - 24438668
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24438532 tatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 24438631  T
Q  180 cagtgtcccggaggcaccagttagcaggatccataat 216  Q
    ||||| ||||| |||||| |||||||||| |||||||    
T  24438632 cagtgccccgggggcaccggttagcaggacccataat 24438668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 18485959 - 18486143
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| |||||||||||||||||||||||||||              |||||||||| |||||  |||||||||||||||||||||||    
T  18485959 aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaa---ttatatagtaattaatgtattgaaattgtgtaattaattta 18486055  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagg 207  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| || |||| |||||||||    
T  18486056 taataaagttaaaaacagtttccttttatggtaataatttcattttatggtatgcttaacccgtgccccgaagacaccggttagcagg 18486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 4628563 - 4628725
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||              ||||||||||||||||||||||||||||| ||||||||||    
T  4628563 aaagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaa---ttatatagtagttaatacattgaaattgtttaattaattt 4628659  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4628660 ataataaagtcagaaacagtttacttttatggtaataattcccttttatggtatgcttaaccagtg 4628725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 79 - 191
Target Start/End: Original strand, 47839546 - 47839658
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||    
T  47839546 ttatataatagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgaataa 47839645  T
Q  179 ccagtgtcccgga 191  Q
    |||||| ||||||    
T  47839646 ccagtgccccgga 47839658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 42044425 - 42044300
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  42044425 ttatatagtagttaatagattgaaattgtgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaa 42044326  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||| ||||| |||||| |||||||    
T  42044325 ccagtgccccgg-ggcaccggttagca 42044300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 12218624 - 12218440
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||              |||||||||||||||| ||||||||||||||||||||||||    
T  12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatat---gaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattta 12218528  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||| ||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||| | |||| ||||||||||    
T  12218527 taataaaataaaaaatagtttccttttatggtaataattctcttttatggtatgtttaaccagtgccccgg-gacaccggttagcagga 12218440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 34333282 - 34333466
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||              |||||||||| ||||| ||||||||||||||||||||||||    
T  34333282 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtaattaatgcattgaaattgtgtaattaattta 34333378  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||  |||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||| |||||| ||||||||||    
T  34333379 taataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggcaccggttagcagga 34333466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 5239339 - 5239474
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5239339 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaa 5239438  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |  ||| ||| | |||||  |||||||||| |||||    
T  5239439 cttgtgcccccggggcactggttagcaggacccata 5239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 45045824 - 45045935
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  45045824 ttatatagtaattaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaa 45045923  T
Q  179 ccagtgtcccgg 190  Q
    |||||| |||||    
T  45045924 ccagtgccccgg 45045935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 18117197 - 18117325
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||| |||||||||||||||||||    
T  18117197 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttatagtaataatttcattttatggtatgcttaa 18117296  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| || ||| ||||||||||| ||||    
T  18117297 ccagtgccctgga-gcaccagttagtagga 18117325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 34606315 - 34606444
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  34606315 ttatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaagcagtttccttttatggtaataattaccttttatggtatgcttaa 34606414  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| |||||  ||||| ||||||||||    
T  34606415 cccgtgccccgggagcaccggttagcagga 34606444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 525206 - 525079
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||    
T  525206 tatacagtagttaatgcattgaaattgtataattaatttataataaaatcaaaaacagtttccttttatggtaataattctcttttatgatatgtttaac 525107  T
Q  180 cagtgtcccggaggcaccagttagcagga 208  Q
    ||||   ||||| ||||| ||||||||||    
T  525106 cagtactccgga-gcaccggttagcagga 525079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 8754717 - 8754617
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| | |||||||||||||||||    
T  8754717 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttgttttatggtaataatttccttttatggtatgcttaa 8754618  T
Q  179 c 179  Q
    |    
T  8754617 c 8754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 23363296 - 23363189
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||  |||||||||||| |||||||    
T  23363296 tatagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaaacagtttccttttatggtaatatttctcttttatggtatgtttaacca 23363197  T
Q  182 gtgtcccg 189  Q
    ||| ||||    
T  23363196 gtgccccg 23363189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 30810709 - 30810811
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||   |||||||||||| ||||    
T  30810709 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattttcttttatggtatgtttaa 30810808  T
Q  179 cca 181  Q
    |||    
T  30810809 cca 30810811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 43594168 - 43594062
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||||||| ||||| |||||||||  |||||||||||||||||    
T  43594168 ttatataatagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttcctcttatgataataattctcttttatggtatgcttaa 43594069  T
Q  179 ccagtgt 185  Q
    |||||||    
T  43594068 ccagtgt 43594062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 11686456 - 11686326
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacag--tttccttttatggtaataattccattttatggtatgctt 176  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||  |||  |||||||||||||||||  ||||||| |||||||    
T  11686456 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttttttttttatggtaataattctcttttatgatatgctt 11686357  T
Q  177 aaccagtgtcccggaggcaccagttagcagga 208  Q
    |||| ||  |||||||||||| ||||||||||    
T  11686356 aacctgt-acccggaggcaccggttagcagga 11686326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 1737034 - 1737160
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||| |||||||||||| |||||||| | ||||||| ||||| |||||| |||||||| |||||||||||||||||||    
T  1737034 ttatataatagttaatgcattgaaatagtgtaattaattgataataaagttaaaaacattttccatttatgataataatt-cattttatggtatgcttaa 1737132  T
Q  179 ccagtgtcccggaggcaccagttagcag 206  Q
    |||||| |||||| ||||| ||||||||    
T  1737133 ccagtgccccggaagcaccggttagcag 1737160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 7689326 - 7689227
Alignment:
Q  85 agtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  7689326 agtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatacttaaccagtg 7689227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 13065009 - 13064903
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaa-cagtttccttttatggtaataattccattttatggtatgctta 177  Q
    ||||||| || |||||  |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13065009 ttatataatatttaatgtattgaatttgtgtaattaatttataataaagtcaaaaaacagtttccttttatggtaataattcccttttatggtatgctta 13064910  T
Q  178 accagtg 184  Q
    |||||||    
T  13064909 accagtg 13064903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 28587963 - 28588065
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||| ||||    
T  28587963 ttatatagtagtcaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgtttaa 28588062  T
Q  179 cca 181  Q
    |||    
T  28588063 cca 28588065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 37674236 - 37674109
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||  | ||   |||||||||||||||||    
T  37674236 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgatataattttttttttatggtatgcttaa 37674137  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||||  | |||||| ||||||||||    
T  37674136 ccagtgtcc--ggggcaccggttagcagga 37674109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 47083109 - 47083211
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  47083109 ttatatagtagttaatgtattgaaattgtgtaattaattgataataaagttaaaaacagtttccttttatggtaataattcccttttatgatatgtttaa 47083208  T
Q  179 cca 181  Q
    |||    
T  47083209 cca 47083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 33636506 - 33636611
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||| | ||||| |||||  ||||||||||||||||| ||||||||||||||||||    
T  33636506 ttatataataattaattcattgaaattgtgtaattaatttataataaagtaaaaaatagtttatttttatggtaataattctattttatggtatgcttaa 33636605  T
Q  179 ccagtg 184  Q
    ||||||    
T  33636606 ccagtg 33636611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 47657034 - 47657137
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| | |||| ||||||  |||||||||||||||||| |||||||||||||||||    
T  47657034 ttatatagtaattaatgcattgaaattgtgtaattaatttataataaagttaaaagcagttt--ttttatggtaataattcccttttatggtatgcttaa 47657131  T
Q  179 ccagtg 184  Q
     |||||    
T  47657132 tcagtg 47657137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 28262098 - 28262207
Alignment:
Q  97 attgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcac 196  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||| || || ||| ||||    
T  28262098 attgaaattatgtaattaattgataataaaatcaaaaacagtttccttttatagtaataattcttttttatggtatgcttaaccaatgccctggaagcac 28262197  T
Q  197 cagttagcag 206  Q
    | || |||||    
T  28262198 cggtcagcag 28262207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 22739878 - 22739976
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttat-aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgctta 177  Q
    ||||||||||||||| ||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||  ||||| | |||||||||    
T  22739878 tatatagtagttaatgcattgaaattgtgtaattaatttataaaaaaaattaaaaacagttttcttttatggtaataattttatttttttgtatgctta 22739976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 27456245 - 27456175
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatg 149  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  27456245 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatg 27456175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 34546503 - 34546373
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    ||||||||||||||||||||||||||| || || ||||||||||||              |||||||||||||||| |||||||||||||||||||||||    
T  34546503 aaagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 34546407  T
Q  119 ataataaaatcaaaaacagtttccttttatggta 152  Q
    ||| |||| ||||||||||||| |||||||||||    
T  34546406 atagtaaagtcaaaaacagtttacttttatggta 34546373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 5729400 - 5729529
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| ||||||||  ||||||||  ||||||||||| |||||||| ||||||| | ||| ||||||| ||||||||||  |||||||| ||||||||    
T  5729400 ttatataatagttaatgtattgaaataatgtaattaattgataataaagtcaaaaataattttcttttatagtaataattctcttttatggcatgcttaa 5729499  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| | |||||||||  ||||||||||    
T  5729500 ccagtgcctcggaggcacaggttagcagga 5729529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 46716692 - 46716793
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || ||||| || ||||||| |||||||||||||||||||| ||||||| | |||||||||||| |||||||||| |||||||||||| ||||    
T  46716692 ttatataatacttaatgcactgaaattatgtaattaatttataataaagtcaaaaatattttccttttatgataataattcccttttatggtatgtttaa 46716791  T
Q  179 cc 180  Q
    ||    
T  46716792 cc 46716793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 18470071 - 18469993
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    |||||||| ||||||||||||||||||||||||||||||||| | ||| |||||||||||| | ||||||||||||||||    
T  18470071 ttatatagcagttaatacattgaaattgtgtaattaatttatga-aaagtcaaaaacagttacattttatggtaataatt 18469993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 37631674 - 37631604
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatg 149  Q
    ||||||| || ||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37631674 ttatataataattaatgcattaaaattatgtaattaatttataataaaatcaaaaacagtttccttttatg 37631604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 29835836 - 29835735
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttcctttt-atggtaataattccattttatggtatgctta 177  Q
    ||||||| ||||||||  ||| |||||| ||||||||||| ||||||| | |||||||||||  |||| ||||||||||||| |||||||||||||||||    
T  29835836 ttatatactagttaatgtattaaaattgcgtaattaatttgtaataaagttaaaaacagttttttttttatggtaataattctattttatggtatgctta 29835737  T
Q  178 ac 179  Q
    ||    
T  29835736 ac 29835735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 23357812 - 23357724
Alignment:
Q  109 taattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcacc 197  Q
    |||||||||||||| ||| ||||||||||||||| |||||| |||||||||  || |||| ||||||||||||||| ||||||| ||||    
T  23357812 taattaatttataaaaaagtcaaaaacagtttccatttatgataataattctcttctatgatatgcttaaccagtgccccggagacacc 23357724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 47118100 - 47118041
Alignment:
Q  100 gaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattc 159  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  47118100 gaaattgtgtaattaatttataataaagtcaagagcagtttccttttatggtaataattc 47118041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 6097334 - 6097377
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6097334 aagggaaatgctaaccgatgcccccggggcactggttaaggata 6097377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 36437431 - 36437507
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataa 156  Q
    ||||||||||| |||| |||||||||||| |||||||||||||| ||| ||||||| ||||| |||||||| ||||||    
T  36437431 ttatatagtaggtaattcattgaaattgtttaattaatttataa-aaagtcaaaaatagttttcttttatgataataa 36437507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 186
Target Start/End: Original strand, 4087677 - 4087783
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaat--aattccattttatggtatgctt 176  Q
    |||||||||||||||| ||||||||| |||| |||||||||||| |   ||||||||||||| |||||||||||||  |||||| |||| ||||||| ||    
T  4087677 ttatatagtagttaatgcattgaaatagtgtgattaatttataa-agtttcaaaaacagttt-cttttatggtaataaaattcc-ttttttggtatgttt 4087773  T
Q  177 aaccagtgtc 186  Q
    ||| ||||||    
T  4087774 aactagtgtc 4087783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 38128406 - 38128472
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||| |||||||||||| |||||||    
T  38128406 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggaggcaccggttagca 38128472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 4100656 - 4100557
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| |||||  ||| ||||| ||| ||||||||||||| ||||||||||||||||   |||||| |||||||||  |||||| |||||| |||    
T  4100656 ttatatagtaattaatgtattaaaattatgttattaatttataatcaaatcaaaaacagttt-tatttatgataataattcatttttatagtatgcctaa 4100558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 13556474 - 13556553
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttat 167  Q
    |||| ||| ||||||||||||||||||||||||||| ||| |||| |||| | || |||||||||||||||| | ||||||    
T  13556474 tagtcaatgcattgaaattgtgtaattaatttataa-aaagtcaataacaatatctttttatggtaataatttccttttat 13556553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 3021945 - 3021988
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataa 122  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  3021945 ttatatactagttaatacattgaaattgtataattaatttataa 3021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 18220802 - 18220704
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| |||||  || ||||||||||||||||||||||| ||   |||||| ||||| ||||||||||||||| | | |||| |||||| |||||    
T  18220802 ttatatagtaattaatgtatagaaattgtgtaattaatttataa-aatggcaaaaatagttttcttttatggtaataaattccttttttggtatccttaa 18220704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 20116944 - 20117022
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    |||||||||| ||||| ||||||||||||||| | ||||| ||| ||   |||||||||||| |||||||| ||||||||    
T  20116944 ttatatagtaattaatgcattgaaattgtgtagtaaatttttaa-aaggccaaaaacagttttcttttatgataataatt 20117022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 30703689 - 30703728
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  30703689 gggaaatgttaaccggtgcccccggggcactggttaagga 30703728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 32805536 - 32805579
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  32805536 aagggaaatgctaaccggtgttcccggggcactggttaaggata 32805579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 24438477 - 24438515
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  24438477 gggaaatgctaaccggtgcccccggggcactagttaagg 24438515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 30924174 - 30924136
Alignment:
Q  25 aaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||| |||||||||||||| |||||||||||    
T  30924174 aaatgctaaccggtgcccccggggcacgggttaaggata 30924136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 34606261 - 34606303
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||| | |||| ||||||||||||||||||||||    
T  34606261 gggaaatgctaactggtgcctccggggcactggttaaggatat 34606303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 31320414 - 31320381
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  31320414 tgctaaccggtgcccccggggcactggttaagga 31320381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 35791684 - 35791651
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  35791684 tgctaaccggtgcccccggggcactggttaagga 35791651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 37674302 - 37674257
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||||||||||| || | |||| ||||||||||    
T  37674302 aaagggaaatgctaaccgatgcccctggagtactgattaaggatat 37674257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 6097451 - 6097527
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    ||||||||||||||| |||| | |||| |  ||||||||||| ||| |||||||||||  ||||||| || ||||||    
T  6097451 ttccttttatggtaagaatttcctttttttatatgcttaacccgtgccccggaggcactggttagcatgacccataa 6097527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 21869437 - 21869405
Alignment:
Q  174 cttaaccagtgtcccggaggcaccagttagcag 206  Q
    ||||||||||| |||||||||||||||||||||    
T  21869437 cttaaccagtgacccggaggcaccagttagcag 21869405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 54897308 - 54897496
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||              |||||||||||||||| |||||||||||| |||||||||||||    
T  54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaa---ttatatagtagttaatgcattgaaattgtataattaatttata 54897404  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||||| ||||||||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  54897405 ataaagtcaaaaacaatttccttttatggtaataatttccttttatggtatgtttaaccagtgtcccggaggcaccggttagcaggacccat 54897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 16536102 - 16536231
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  16536102 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctattttatggtattcttaa 16536201  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||||| ||||||||||    
T  16536202 ccagtgccccgggggcaccggttagcagga 16536231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 789719 - 789537
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||              |||||||||||||||| |||||||||||||||||||||||    
T  789719 aaagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 789623  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagc 204  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||| |||||||| ||||||    
T  789622 ataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtagcccagaggcaccggttagc 789537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 213
Target Start/End: Original strand, 12356298 - 12356432
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  12356298 ttatatagtagttaatacattgaaattatataattaatttataataaagtcaaaaacagtttccttttatgataataattctcttttatggtatgcttaa 12356397  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||||||| |||| |||||| |||||||||| ||||    
T  12356398 ccagtgttccgggggcaccggttagcaggacccat 12356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 29591186 - 29591372
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||| | |||||||||||||||||||||| ||||              |||||||||||||||| ||||||||||||||| |||||||    
T  29591186 aaagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaa---ttatatagtagttaatgcattgaaattgtgtacttaattt 29591282  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||| ||||| |||||| ||||||||||    
T  29591283 ataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaactagtgccccgggggcaccggttagcagga 29591372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 4089196 - 4089325
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||| ||||    
T  4089196 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgtttaa 4089295  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||| | |||||||||||||||||    
T  4089296 ccagtgccccaggggcaccagttagcagga 4089325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 36395153 - 36395282
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||||||| |||||||||||||||||    
T  36395153 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagttttcttttatgataataattcccttttatggtatgcttaa 36395252  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| || || |||||||||||||||||    
T  36395253 ccagtgccctgggggcaccagttagcagga 36395282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 32202612 - 32202484
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  32202612 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcc-ttttatgatatgcttaa 32202514  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
     || |||||| ||||||||||||| |||||    
T  32202513 tcaatgtcccagaggcaccagttaacagga 32202484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 33108805 - 33108676
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||| || ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33108805 ttatataatagttaatgcattgaaatagtataattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaa 33108706  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| |||||||||||| ||||||||||    
T  33108705 cccgtgccccggaggcaccggttagcagga 33108676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 4269009 - 4268818
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| ||||||||||||||||||||||| |||               ||||||||||||||| |||||||||| ||||||||||||||    
T  4269009 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaac---tatatagtagttaatgcattgaaattatgtaattaatttat 4268913  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    |||||  |||||||||||||| |||||||||||||||||| |||||||||||| |||||||||| ||||  |||||| |||||||||| ||||||    
T  4268912 aataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgattaaccagtgccccgagggcaccggttagcaggacccataa 4268818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 32217045 - 32217227
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||| | |||||||||||||||||||||||||||              |||||||||||||||| ||||||||||||||||||||||||||    
T  32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatttata 32217141  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| |||||||||||||  ||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||| |||| |||||    
T  32217142 ataaagtcaaaaacagttt-tttttatgataataattcccttttatggtatgcttaacctgtgccccggaggcaccggttaacagga 32217227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 15186239 - 15186389
Alignment:
Q  18 gaaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatt 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| ||||||||||||||||||||||    
T  15186239 gaaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatccattgaaattgtgtaattaatt 15186335  T
Q  118 tataataaaatcaaaaacagtttccttttatggtaataattccattttatggta 171  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15186336 tataataatgtcaaaaacagtttccttttatggtaataattccattttatggta 15186389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 43944561 - 43944686
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  43944561 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttgtatggtatgcttaa 43944660  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||| ||||  |||||| |||||||    
T  43944661 ccagtg-cccgagggcaccggttagca 43944686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 50619140 - 50619245
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50619140 ttatatagtagttaatgcattgaaattgtgtacttaatttataataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 50619239  T
Q  179 ccagtg 184  Q
    ||||||    
T  50619240 ccagtg 50619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 19503237 - 19503137
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  19503237 ttatatactagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttattgtaataattcccttttatggtatgcttaa 19503138  T
Q  179 c 179  Q
    |    
T  19503137 c 19503137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 6164147 - 6164282
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  6164147 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagcaaaaaacagtttccttttatggtaataattctcttttatggtatgcttaa 6164246  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||  ||||  | |||| |||||||||| |||||    
T  6164247 ccagtaccccgaggacaccggttagcaggacccata 6164282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 30387266 - 30387167
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30387266 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttatgatatgcttaa 30387167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 39843961 - 39844060
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  39843961 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcctttttagggtatgcttaa 39844060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 7768992 - 7769121
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||  |||||||| || |||||    
T  7768992 ttatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttatggtaataattctcttttatggcatacttaa 7769091  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| ||||| |||||| ||||||||||    
T  7769092 cccgtgccccgggggcaccggttagcagga 7769121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 18068066 - 18067885
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| |||| ||||||||||||||||||||    
T  18068066 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattaaaattgtgtaattaatttat 18067970  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
     ||||  ||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||  ||||| |||||| |||||||    
T  18067969 cataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 18067885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 43202571 - 43202387
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||              |||||||||| ||||| |||| |||||||||||||||||||    
T  43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtat---gaaaaaggaaattatatagtaattaatgcattaaaattgtgtaattaattta 43202475  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||  ||||||||||||| ||||||||||||||||||  |||||||||| |||||||||||| ||||| |||||| ||||||||||    
T  43202474 taataatgtcaaaaacagttttcttttatggtaataattctcttttatggtaagcttaaccagtg-cccgggggcaccggttagcagga 43202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 46148993 - 46149114
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||||||||||| ||||    
T  46148993 ttatataataattaatacattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataattctcttttatggtatgtttaa 46149092  T
Q  179 ccagtgtcccggaggcaccagt 200  Q
    |||||||| ||  |||||||||    
T  46149093 ccagtgtctcgagggcaccagt 46149114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 31680587 - 31680463
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtc 186  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||  ||||||| |||| |||||| |||||    
T  31680587 tagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatttccttttatggtaataattcatttttatgatatgtttaacccgtgtc 31680488  T
Q  187 ccggaggcaccagttagcaggatccat 213  Q
    |||||  |||| |||||||||||||||    
T  31680487 ccgga--cacctgttagcaggatccat 31680463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 5091742 - 5091610
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || |||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  5091742 ttatataataattaatatattaaaattgtgtaattaatttataataaagtcataaacagtttccttttatagtaataattcccttttat-gtatgcttaa 5091644  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||||||||| ||| ||||| |||||||||| ||||    
T  5091643 ccagtgtccggga-gcaccggttagcaggacccat 5091610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 39877363 - 39877242
Alignment:
Q  97 attgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatgg--tatgcttaaccagtgtcccggaggc 194  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||  ||||||||  ||||||||||||||| |||||||||    
T  39877363 attgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatagtaataattctcttttatggtatatgcttaaccagtgccccggaggc 39877264  T
Q  195 accagttagcaggatccataat 216  Q
    ||  |||||||||| |||||||    
T  39877263 acgggttagcaggacccataat 39877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 42898878 - 42898765
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttcctttta--tggtaataattccattttatggtatgctt 176  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| |||||  ||||||||||||  |||||||||||||||    
T  42898878 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttctttttatgtggtaataattctcttttatggtatgctt 42898779  T
Q  177 aaccagtgtcccgg 190  Q
    ||||| ||||||||    
T  42898778 aaccaatgtcccgg 42898765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 54656008 - 54655880
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||| |||||| | |||||||||  | ||||| |||||||||    
T  54656008 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttaggataataattctctcttatgatatgcttaa 54655909  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||||||| |||||| ||||||||||    
T  54655908 ccagtgtcccgg-ggcaccggttagcagga 54655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 30154295 - 30154159
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||  ||||||||| |||||||    
T  30154295 ttatatagtagttaatgtattgaaattatgtaattaatttataataaaatcaaaaacaatttccttatatgataataattctcttttatggtgtgcttaa 30154196  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    |||||| |||| |  || | |||||||||| ||||||    
T  30154195 ccagtgccccgaaaacatcggttagcaggacccataa 30154159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 3783633 - 3783534
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| ||||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  3783633 ttatatagtagttaatgcattaaaattgtttaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaa 3783534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 16820912 - 16821035
Alignment:
Q  85 agtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||| ||||| |||||||||| ||||||||| |||||||||| ||| |  |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  16820912 agtaattaatgcattgaaattctgtaattaacttataataaagtcatacgcagtttccttttatggtaataatttccttttatggtatgcttaaccagtg 16821011  T
Q  185 tcccggaggcaccagttagcagga 208  Q
     ||||| |||||| ||||||||||    
T  16821012 ccccgggggcaccggttagcagga 16821035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 4220249 - 4220374
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||| |||||||||||||||||    
T  4220249 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttat-gtaataattcccttttatggtatgcttaa 4220347  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |  |||  ||| ||||||| |||||||    
T  4220348 catgtgctccgtaggcaccggttagca 4220374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 55882737 - 55882865
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||  ||||||||||| |||||    
T  55882737 ttatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaa-aattcacttttatggtatacttaa 55882835  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| | ||| |||||| ||||| ||||    
T  55882836 cccgtgcctcgggggcaccggttagtagga 55882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 47232061 - 47231881
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| |              ||||||| |||||||| |||||||||  |||||||||||     
T  47232061 aaagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaa---ttatataatagttaatgcattgaaataatgtaattaattg 47231965  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagtta 202  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||||| |  |||||| ||||| ||||    
T  47231964 ataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaaccaataccccggaagcaccggtta 47231881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 53656010 - 53655887
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||| | ||||| | |||  |||||||||||||||| |||||||||||||||||||    
T  53656010 ttatataatagttaatgtattgaaattgtgtaattaatttataataaagttaaaaataattttattttatggtaataatttcattttatggtatgcttaa 53655911  T
Q  179 ccagtgtcccggaggcaccagtta 202  Q
     ||||| | |||||||||| ||||    
T  53655910 tcagtgcctcggaggcaccggtta 53655887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 37987989 - 37988091
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||  |||||| ||||||||||    
T  37987989 ttatatagtagttaatgtattgaaattgtgtaattaatttataataatgttaaaaacagtttccttttattgtaataattctcttttatagtatgcttaa 37988088  T
Q  179 cca 181  Q
    |||    
T  37988089 cca 37988091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 54945910 - 54945778
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||| ||||||||||| |||||    
T  54945910 ttatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaatttcgttttatggt-ataattcctttttatggtatacttaa 54945812  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||||||  |||||  |||| |||||||||| ||||    
T  54945811 ccagtgctccgga-acaccggttagcaggacccat 54945778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 52533917 - 52533816
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || ||||||||  ||||||||| |||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  52533917 ttatatagtagttaatgcactgaaattgaataattaattgataataaagtcgaaaacagtttccttttatggtaataattcccttttatggtatgtttaa 52533818  T
Q  179 cc 180  Q
    ||    
T  52533817 cc 52533816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 24679774 - 24679671
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  24679774 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagttaaaaacaatttcc-tttatggtaataattctcttttatggtatgcttaa 24679676  T
Q  179 ccagt 183  Q
     ||||    
T  24679675 tcagt 24679671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 28755674 - 28755774
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| | | |||||||||||||||||| ||||| |||| |||||| ||||||||||    
T  28755674 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagttagaaacagtttccttttatgataatacttcc-ttttatagtatgcttaa 28755772  T
Q  179 cc 180  Q
    ||    
T  28755773 cc 28755774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 41265513 - 41265617
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||   |||| ||||||| ||||    
T  41265513 ttatatagtagttaatgcagtgaaattgtgtaattaatttataa-aaaatcaaaaacagttttcttttattgtaataattttcttttttggtatgtttaa 41265611  T
Q  179 ccagtg 184  Q
    ||||||    
T  41265612 ccagtg 41265617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 46688337 - 46688264
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  46688337 ttatacagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatggta 46688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 90 - 208
Target Start/End: Original strand, 50603292 - 50603411
Alignment:
Q  90 ttaatacattgaaattgtgtaattaatttataataaaatcaaaaacag-tttccttttatggtaataattccattttatggtatgcttaaccagtgtccc 188  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||| |||  ||||||| |||||||||  ||||||||||||||||||||||  |||    
T  50603292 ttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttttttttttatgataataattctcttttatggtatgcttaaccagtacccc 50603391  T
Q  189 ggaggcaccagttagcagga 208  Q
    |    |||||||||||||||    
T  50603392 gagaacaccagttagcagga 50603411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 49915213 - 49915301
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttat 167  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| | |||||||||||||||||||  |||||||| | ||||||    
T  49915213 ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtaaaaaacagtttccttttataataataatttccttttat 49915301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 31517219 - 31517325
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagt-ttccttttatggtaataattccattttatggtatgctta 177  Q
    ||||||| |||||||| ||||||||| |||||||||||| |||||||| ||||||| | | ||  |||||||||||||||||  || |||||||||||||    
T  31517219 ttatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaataatgttttttttatggtaataattctcttatatggtatgctta 31517318  T
Q  178 accagtg 184  Q
    |||||||    
T  31517319 accagtg 31517325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 54054602 - 54054675
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    ||||||| |||||||| ||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||    
T  54054602 ttatataatagttaatgcattgaaatagtgtaattaattgataataaagtcaaaaacaatttccttttatggta 54054675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 8133782 - 8133876
Alignment:
Q  100 gaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggca 195  Q
    |||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||   |||||| ||||| ||||||| |||||| ||||||    
T  8133782 gaaaatgtgtaattaatttataataaagtcaaaaatagttttcttttatggtaataattatcttttat-gtatgtttaaccattgtcccagaggca 8133876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 53268774 - 53268875
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||| |||||||||||||||||||||| ||| ||||||||| ||| |||||||  ||||||||   |||| ||||||||||||    
T  53268774 ttatatattagttaatgcattaaaattgtgtaattaatttataa-aaagtcaaaaacaattttcttttataataataattttcttttttggtatgcttaa 53268872  T
Q  179 cca 181  Q
    |||    
T  53268873 cca 53268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 52697106 - 52697213
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||| ||||| | |||| ||||||||||||| ||||||| | ||| | ||||| ||||||||||  ||||||| |||| ||||    
T  52697106 ttatatagtagttaatacattaaaattatataat-aatttataataaagtcaaaaataattttcctttattgtaataattctcttttatgatatgtttaa 52697204  T
Q  179 ccagtgtcc 187  Q
    | |||||||    
T  52697205 cgagtgtcc 52697213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 53004063 - 53003959
Alignment:
Q  104 ttgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttag 203  Q
    ||||||||||||| ||||||||| ||||||| | ||||||||||   |||||||||  ||||||| ||||||||| ||||||||| | | |||| |||||    
T  53004063 ttgtgtaattaatgtataataaagtcaaaaataatttccttttaaaataataattctcttttatgatatgcttaatcagtgtccccgggacaccggttag 53003964  T
Q  204 cagga 208  Q
    |||||    
T  53003963 cagga 53003959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 42815171 - 42815237
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttc-cttttatggta 152  Q
    ||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  42815171 tagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttctcttttatggta 42815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 50167646 - 50167685
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  50167646 tatagtagttaatgcattgaaattgtgtaattaatttata 50167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 17344790 - 17344666
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||| ||||| | ||||||| |||||| ||| | ||||| |||||| |||||||||||||| |   |||| | |||| |||||    
T  17344790 ttatataatagttaatgcatttaaattatataattaaattataa-aaatttaaaaaaagtttctttttatggtaataactttcttttcttgtatccttaa 17344692  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
     ||||||||||| | ||||||||||||    
T  17344691 acagtgtcccgg-gacaccagttagca 17344666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 28119978 - 28119912
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||| ||||||| |||| |||||||    
T  28119978 ttccttttatggtaagaatttcctttttttgtatgcttaaccagtgccccggagacaccggttagca 28119912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 292229 - 292301
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatcc 211  Q
    ||||||||||||||| |||| | |||| | | |||||||||| ||| |||||||||||| ||||||| |||||    
T  292229 ttccttttatggtaaaaatttcctttttttgcatgcttaacccgtgccccggaggcaccggttagcacgatcc 292301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 1432650 - 1432576
Alignment:
Q  110 aattaatttataataaaatcaaaaacagtttccttttatggtaat--aattccattttatggtatgcttaaccagt 183  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||  |||||  ||||||  ||||||||||||||    
T  1432650 aattaatttataataaaataaaaaacagttt-cttttatgataataaaattctcttttataatatgcttaaccagt 1432576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12701961 - 12701917
Alignment:
Q  17 tgaaagggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||    
T  12701961 tgaaagggaaatgttaactggtgcccccggggcactggttaagga 12701917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 22225935 - 22225891
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||    
T  22225935 aaagcgaaatgctaaccggtgcccccgggacactggttaaggata 22225891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 34151118 - 34151161
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||    
T  34151118 aaaggaaaatgctaaccgatgcccc-ggggcactggttaaggata 34151161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 43944505 - 43944545
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  43944505 aagggaaatgctaaccggtgcctccggggcactggttaagg 43944545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 46688398 - 46688354
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||    
T  46688398 aagggaaatgctaactggtgcccccgaggcactggttaaggatat 46688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 292112 - 292155
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||    
T  292112 aagggaaatgctaaccggtgccccgggggcaccggttaaggata 292155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 38609066 - 38609105
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  38609066 gggaaatgttaaccaatgcccccggggcactggttaagga 38609105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 54054548 - 54054590
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||    
T  54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatat 54054590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 54054666 - 54054712
Alignment:
Q  162 ttttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||||||||||||||||| ||||| |||||| ||| ||||||    
T  54054666 ttttatggtatgcttaaccagtgccccgggggcaccggttggcagga 54054712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 7768935 - 7768976
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  7768935 aaagggaaatgctaatcggtacccccggggcactggttaagg 7768976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16536046 - 16536086
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||||| |||||||||||||| | ||||||    
T  16536046 aagggaaatgctaaccggtgcccccggggcacggattaagg 16536086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 168462 - 168649
Alignment:
Q  18 gaaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatt 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||| |||              |||||||||||||||| ||||||||||||||||||||||    
T  168462 gaaagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatt 168558  T
Q  118 tataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| ||||||||||    
T  168559 tataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccaatgccccgggggcaccggttagcagga 168649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 27988687 - 27988503
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||              ||||||| |||||||| ||||||||||||||||||||||||    
T  27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaa---ttatataatagttaatgcattgaaattgtgtaattaattta 27988591  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  27988590 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcagga 27988503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 28045989 - 28045805
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||              ||||||| |||||||| ||||||||||||||||||||||||    
T  28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaa---ttatataatagttaatgcattgaaattgtgtaattaattta 28045893  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  28045892 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtg-cccgggggcaccggttagcagga 28045805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 34228682 - 34228865
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||| ||||||||||||||||||||              |||||||||| ||||| |||||||||||||||||||||| |||    
T  34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaa---ttatatagtaattaatgcattgaaattgtgtaattaattgata 34228778  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  34228779 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 34228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 4537932 - 4537747
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||              |||||||||||||||| |||||||||| ||||||||||| |    
T  4537932 aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaa---ttatatagtagttaatgcattgaaattatgtaattaattga 4537836  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||| ||||||||||    
T  4537835 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacctgtgccccagaggcaccggttagcagga 4537747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 30675758 - 30675576
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| ||||||||||||||||||||||||||    
T  30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatttata 30675662  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||| ||||||||||    
T  30675661 ataatgtcaaaaacagtttccttttatggtaataattcc-ttttatggtatgcttaaccagtgccccggggacaccggttagcagga 30675576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 16888676 - 16888542
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  16888676 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttgtggtatgcttaa 16888577  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||| || ||||| |||||| |||||||||| ||||    
T  16888576 ccaatgccccgggggcaccggttagcaggacccat 16888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 197
Target Start/End: Complemental strand, 29444272 - 29444154
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  29444272 ttatatagtagttaacgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgtttaa 29444173  T
Q  179 ccagtgtcccggaggcacc 197  Q
    |||||||||||||||||||    
T  29444172 ccagtgtcccggaggcacc 29444154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 2805392 - 2805267
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  2805392 ttatataatagttaatgcattgaaattgtgtaattaacctataataaagtcaaaagcagtttccttttatggtaataattcccttttatggtatgcttaa 2805293  T
Q  179 ccagtgtcccggaggcaccagttagc 204  Q
    |||||| |||||||||||| ||||||    
T  2805292 ccagtgccccggaggcaccggttagc 2805267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 16890612 - 16890483
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16890612 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcctttttatggtatgcttaa 16890513  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| | | | |||||| ||||||||||    
T  16890512 ccggtgcctccggggcaccggttagcagga 16890483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 21595900 - 21596013
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  21595900 ttatataggagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtattaattcccttttatggtatgcttaa 21595999  T
Q  179 ccagtgtcccggag 192  Q
    ||||||||||||||    
T  21596000 ccagtgtcccggag 21596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 7304650 - 7304515
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||  |||||||||||||||||    
T  7304650 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgaaaataattctcttttatggtatgcttaa 7304551  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    ||||||  |||| |||||| ||||| |||| |||||    
T  7304550 ccagtgctccgggggcaccggttagtaggacccata 7304515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 9537956 - 9537821
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||  |||||| |||||| ||||||||| | |||||||||||||||||    
T  9537956 ttatatagtagttaatgcattaaaattgtgtaattaatttataataaattcaaaaggagtttctttttatagtaataatttccttttatggtatgcttaa 9537857  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||||||||||| |||| |||||||||| |||||    
T  9537856 ccagtgtcccggagacaccggttagcaggacccata 9537821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 12203908 - 12204019
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||| ||    
T  12203908 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaa 12204007  T
Q  179 ccagtgtcccgg 190  Q
    ||||||||||||    
T  12204008 ccagtgtcccgg 12204019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 12448336 - 12448447
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||| ||    
T  12448336 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatgataataattcccttttatggtatgctgaa 12448435  T
Q  179 ccagtgtcccgg 190  Q
    ||||||||||||    
T  12448436 ccagtgtcccgg 12448447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 33357317 - 33357150
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||              |||||||||||||||| ||||||||||||||||||||||||    
T  33357317 aagggaaatgctaactggtgcccccggagcactggttaaggatat---gaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattta 33357221  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccgg 190  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| |||||    
T  33357220 taataaagtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaactagtgccccgg 33357150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 36730498 - 36730608
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  36730498 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattctcttttatagtatgcttaa 36730597  T
Q  179 ccagtgtcccg 189  Q
    || ||| ||||    
T  36730598 cctgtgccccg 36730608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 9063184 - 9063055
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||| || |||||||||    
T  9063184 ttatatagtagttaatgcattgaaatcgtgcaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttgtgatatgcttaa 9063085  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| |||||| ||||| ||||||||||    
T  9063084 ccagtgccccggaagcaccggttagcagga 9063055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 10870406 - 10870495
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatg 168  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10870406 ttatataatagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattcccttttatg 10870495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 11112693 - 11112822
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||  |||||||||||||||||    
T  11112693 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatgcttaa 11112792  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| || || |||||  ||||||||||    
T  11112793 cctgtgccctgggggcactggttagcagga 11112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 28626822 - 28626950
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  28626822 ttatatagtagttaatgtattgaaattgtgtgattaatttataataaagtcaaaaacagtttctttttatgataataattcccttttatggtatgcttaa 28626921  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
     |||||||| ||| ||||| ||||||||||    
T  28626922 tcagtgtccggga-gcaccggttagcagga 28626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 43119271 - 43119399
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||||  |||||||||||||||||    
T  43119271 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatggtgataattctcttttatggtatgcttaa 43119370  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||| || ||||| |||||| ||||||||||    
T  43119371 ccaatggcccgg-ggcaccggttagcagga 43119399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 4648248 - 4648352
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||||||| ||||||| |||||||||    
T  4648248 ttatatagtagttaatacattgaaattgtgtaattaatttataataatgtcaaaaacagtttcttttgatggtaataattcccttttatgatatgcttaa 4648347  T
Q  179 ccagt 183  Q
    |||||    
T  4648348 ccagt 4648352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 208
Target Start/End: Complemental strand, 16394247 - 16394064
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| ||||||||||||||||||||||||| |              ||||||| |||||||| |||||||||  ||||||||||| |||    
T  16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaa---ttatataatagttaatgcattgaaataatgtaattaattgata 16394151  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| |||||||||||||||||||||| |||||||||  |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  16394150 ataaagtcaaaaacagtttccttttatgctaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcagga 16394064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 37373259 - 37373377
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||| || |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  37373259 ttatataatagttaatgcattgaaattgtgtaattaattgataataaagtcgaaaacagttttcttttatggtaataattccctttcatggtatgcttaa 37373358  T
Q  179 ccagtgtcccggaggcacc 197  Q
    || ||||||||||| ||||    
T  37373359 cccgtgtcccggagacacc 37373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 42035113 - 42034988
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  42035113 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaa 42035014  T
Q  179 ccagtgtcccggaggcaccagttagc 204  Q
    |  ||| ||| ||| |||| ||||||    
T  42035013 cacgtgccccagagacaccggttagc 42034988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 82 - 206
Target Start/End: Complemental strand, 9254030 - 9253907
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    ||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  9254030 tatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaacagtttccttttatagtaataattctcttttatggtatgcttaacca 9253932  T
Q  182 gtgtcccggaggcaccagttagcag 206  Q
     |||||| | |||||| ||||||||    
T  9253931 atgtcccaggggcaccggttagcag 9253907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 20831737 - 20831550
Alignment:
Q  24 gaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttataat 123  Q
    ||||||||||||| |||||||||| ||||||||||||||||              |||||||||||||||| ||||||||| || |||||||||||||||    
T  20831737 gaaatgctaaccggtgcccccgggacactggttaaggatat---gaaaaaggaaattatatagtagttaatgcattgaaatagtataattaatttataat 20831641  T
Q  124 aaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg-tcccggaggcaccagttagcaggatccata 214  Q
    ||| |||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||| | |||| |||||||||| |||||    
T  20831640 aaagtcaaaagcagtttccttttatggtaataattctcttttatggtatgcttaatcagtgctcccgg-gacaccggttagcaggacccata 20831550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 13643009 - 13643170
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||               |||||||||||||||| |||||||||| ||||||||||||    
T  13643009 aaaggaaaatgctaaccggtgcccccggggcactggttaaggata---cgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaattt 13643105  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||||| ||||||| |  |||||||||||||||||||||  |||||||||||||||||||||||    
T  13643106 ataataaagtcaaaaa-aaattccttttatggtaataattctcttttatggtatgcttaaccagtg 13643170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 13743434 - 13743595
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||               |||||||||||||||| |||||||||| ||||||||||||    
T  13743434 aaaggaaaatgctaaccggtgcccccggggcactggttaaggata---cgaaaaaggaaattatatagtagttaatgcattgaaattatgtaattaattt 13743530  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||||| ||||||| |  |||||||||||||||||||||  |||||||||||||||||||||||    
T  13743531 ataataaagtcaaaaa-aaattccttttatggtaataattctcttttatggtatgcttaaccagtg 13743595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 29235289 - 29235400
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||||||||||| || ||||||||||| |||||||| | |||||| | ||||||||    
T  29235289 ttatatagtagttaatgcattaaatttgtgtaattaatttataataaaatcaaaaataggttccttttatgataataatttccttttataggatgcttaa 29235388  T
Q  179 ccagtgtcccgg 190  Q
    ||||||||||||    
T  29235389 ccagtgtcccgg 29235400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 32113962 - 32114092
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagttt-ccttttatggtaataattccattttatggtatgctta 177  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| | ||||||||||| ||||||||| |||||||||| |||||| ||||| |||    
T  32113962 ttatatagtagttaatgcattgaaattgtttaattaatttataataaagtaaaaaacagtttcccttttatgataataattcccttttatagtatgttta 32114061  T
Q  178 accagtgtcccggaggcaccagttagcagga 208  Q
    |||||||  || ||| |||| ||||||||||    
T  32114062 accagtgctccagagccaccggttagcagga 32114092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 3930365 - 3930260
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||||||||||| || |||||||| | ||||||| |||||||||    
T  3930365 ttatatagtagttaatgcattgaagttgtgtaattaattgataataaagtcaaaaacagtttccttttttgataataatttccttttatgatatgcttaa 3930266  T
Q  179 ccagtg 184  Q
    ||||||    
T  3930265 ccagtg 3930260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 88 - 208
Target Start/End: Original strand, 39406905 - 39407023
Alignment:
Q  88 agttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcc 187  Q
    ||||||| | || |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||| ||    
T  39406905 agttaatgcgttaaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgtttaactagtgccc 39407004  T
Q  188 cggaggcaccagttagcagga 208  Q
    ||  |||||| ||||||||||    
T  39407005 cg--ggcaccggttagcagga 39407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 16785140 - 16785241
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||  |||||||||||| ||||    
T  16785140 ttatatagcagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttataataataattctcttttatggtatgattaa 16785239  T
Q  179 cc 180  Q
    ||    
T  16785240 cc 16785241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 40831331 - 40831467
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| ||| |||||||||||||||||   |||||| |||||| |||    
T  40831331 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaattttcttttatggtaataattttcttttatagtatgcataa 40831430  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataa 215  Q
     | ||  || |||| |||| |||||||||| ||||||    
T  40831431 tctgtaccctggagacaccggttagcaggacccataa 40831467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 79 - 210
Target Start/End: Complemental strand, 42433675 - 42433545
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| | |||| |||||| ||| |    
T  42433675 ttatataatagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaacagttttcttttatggtaataatttccttttttggtatacttca 42433577  T
Q  179 ccagtgtcccggaggcaccagttagcaggatc 210  Q
       ||| |||||||||||| ||||||| ||||    
T  42433576 tttgtgccccggaggcaccggttagcatgatc 42433545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 97 - 208
Target Start/End: Complemental strand, 24843393 - 24843283
Alignment:
Q  97 attgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcac 196  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||  ||||||||||||||||| |||| | | ||| ||||    
T  24843393 attgaaattgtgtaattaatttataataaagtcaaaatcagtttccttttatgacaataattctcttttatggtatgcttaatcagtattcggga-gcac 24843295  T
Q  197 cagttagcagga 208  Q
    | ||||||||||    
T  24843294 cggttagcagga 24843283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 22956761 - 22956845
Alignment:
Q  81 atatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccatttt 165  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  22956761 atatggtagttaatacattaaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaaaaattccctttt 22956845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 22451838 - 22451916
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    |||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||    
T  22451838 ttatatagcagttaatgcattgaaattgtgtaattaatttataa-aaagtcaaaaatagcttccttttatggtaataatt 22451916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 17467663 - 17467745
Alignment:
Q  85 agtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttat 167  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||   ||||||||| |||||||    
T  17467663 agtaattaatgcattgaaattgtgtaattaattgataataaaatcaaaaacaatttccttttactataataattcaattttat 17467745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 34192829 - 34192902
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| | |||  ||||||||||    
T  34192829 ttatatactagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaataattttattttatggta 34192902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 9278266 - 9278313
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaa 126  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  9278266 ttatataatagttaatgcattgaaattgtgtaattaatttataataaa 9278313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 30933453 - 30933376
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataat 157  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| ||| | ||||||| ||| |||||| | |||||||    
T  30933453 ttatatagtaattaatgcattgaaattgtgtaattaatttataa-aaagttaaaaacatttttcttttacgataataat 30933376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 39751658 - 39751617
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  39751658 gggaaatgctaaccggtgcccccggggcactggttaaggata 39751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 14191103 - 14191037
Alignment:
Q  118 tataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||||||||||||||||||||  ||||||| |||||||||  |||||| ||||  ||||||||||    
T  14191103 tataataaaatcaaaaacagttttattttatgataataattctcttttatagtatttttaaccagtg 14191037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 38843486 - 38843556
Alignment:
Q  136 agtttccttttatggtaataa-ttccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||| |||||||||| |||| |||| |||| ||||||| ||||||||||||||||||||| | |||||||    
T  38843486 agttttcttttatggttataacttcctttttttggtatgtttaaccagtgtcccggaggcaacggttagca 38843556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 18955693 - 18955734
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  18955693 gggaaatgctaaccgatgcccccgtggcactggttaatgata 18955734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 29566700 - 29566741
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  29566700 gggaaatgctaaccggtgcccccggggcacgggttaaggata 29566741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 2490377 - 2490334
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||    
T  2490377 aagggaaatgctaaccggtgcctccggggcacaggttaaggata 2490334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 10618072 - 10618119
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaa 126  Q
    |||||||||||||||| || | ||||||||||||||||| ||||||||    
T  10618072 ttatatagtagttaatgcaattaaattgtgtaattaattgataataaa 10618119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 23722248 - 23722287
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  23722248 gggaaatgttaaccggtgcccccggggcactggttaagga 23722287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 12652630 - 12652672
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| |||||| || |||||||||||||||||    
T  12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatat 12652672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 40267921 - 40267962
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||||| ||| |||||| ||||||||||||||||    
T  40267921 gggaaatgctaaccaatgtccccggagcactggttaaggata 40267962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 9254101 - 9254069
Alignment:
Q  24 gaaatgctaaccgatgcccccggggcactggtt 56  Q
    ||||||||||||| |||||||||||||||||||    
T  9254101 gaaatgctaaccggtgcccccggggcactggtt 9254069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 10618125 - 10618181
Alignment:
Q  152 aataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| | ||||||||||||||||||| ||||| | | |||||| ||||||||||    
T  10618125 aataattaccttttatggtatgcttaacccgtgtctccggggcaccggttagcagga 10618181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 12506915 - 12506879
Alignment:
Q  25 aaatgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  12506915 aaatgttaaccgatgcctccggggcactggttaagga 12506879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 36057967 - 36057904
Alignment:
Q  97 attgaaattgtgtaattaatttataataa--aatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||||||| |||||||||||||| ||  | ||||||| ||||| |||||||| ||||||||    
T  36057967 attgaaattgtataattaatttataaaaagtagtcaaaaaaagttttcttttatgataataatt 36057904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 206
Target Start/End: Complemental strand, 42770178 - 42769995
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||              |||||||||||||||| ||||||||||||||||||||||||    
T  42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtat---gaaaaaggaaattatatagtagttaatgcattgaaattgtgtaattaattta 42770082  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcag 206  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||    
T  42770081 taataatatcaaaaacagtttccttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcag 42769995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 5694321 - 5694504
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||| ||||||||||||||||||||||              |||||||||||||||| |||||||||||||||||||||| |||    
T  5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattgata 5694417  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||| |||||| ||||||||||    
T  5694418 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgctccgggggcaccggttagcagga 5694504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 24178649 - 24178470
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    |||||||||||||||||||||||||||||||||||||||||||              ||||||| |||||||| ||||||||||||||||||||| ||||    
T  24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaa---ttatataatagttaatgcattgaaattgtgtaattaatctata 24178553  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagc 204  Q
    ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  24178552 ataaagtcaaaagcagtttccttttatggtaataatttcattttatggtatgcttaaccagtgccccgggggcaccggttagc 24178470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 51065938 - 51065751
Alignment:
Q  18 gaaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatt 117  Q
    ||||||||||||||||||| || ||||||| ||||||||||||||||              ||||||||||||||||  |||||||||||||||||||||    
T  51065938 gaaagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaa---ttatatagtagttaatgtattgaaattgtgtaattaatt 51065842  T
Q  118 tataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| ||||||||||    
T  51065841 tataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccaggggcaccggttagcagga 51065751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 15227793 - 15227919
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15227793 ttatatagtaattaatgcattgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 15227892  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||| |||||||||||| |||||||    
T  15227893 ccagtgccccggaggcaccggttagca 15227919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 18043159 - 18043345
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||              |||||||||||||||| |||||||||||||||||||||||    
T  18043159 aaagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 18043255  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  18043256 ataataatgtcaaaaacagttttcttttatggtaataattctattttatggtatgcttaaccagtgccccgggggcaccggttagcagga 18043345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 38162904 - 38163033
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38162904 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 38163003  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| ||||| |||||| ||||||||||    
T  38163004 cccgtgccccgggggcaccggttagcagga 38163033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 29657770 - 29657954
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||              |||||||||||||||| |||||||||||| ||||||||| ||    
T  29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaa---ttatatagtagttaatgcattgaaattgtataattaattgat 29657866  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || || |||||| ||||||||||    
T  29657867 aataaagtcaaaaacagtttccttttttggtaataattcccttttatggtatgcttaaccagtgccctgggggcaccggttagcagga 29657954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 12072251 - 12072067
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||||              |||| ||||||||||| ||||||||||||||||||||||     
T  12072251 aaaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaa---ttatgtagtagttaatgcattgaaattgtgtaattaattg 12072155  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcag 206  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||    
T  12072154 ataataaagtcaaaaacagttttcttttatggtaataattcctttttatggtatgcttaaccagtgccccgggggcaccggttagcag 12072067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 19031947 - 19031818
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  19031947 ttatatagtagttaaaacattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatgatatgcttaa 19031848  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||  ||||||| |||| ||||||||||    
T  19031847 cccgtaccccggagacaccggttagcagga 19031818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 36446457 - 36446344
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  36446457 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatagtaataattcccttttatggtatgtttaa 36446358  T
Q  179 ccagtgtcccggag 192  Q
    |||||||| |||||    
T  36446357 ccagtgtctcggag 36446344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 47010047 - 47010176
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  47010047 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaattcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaa 47010146  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||  || | |||||| ||||||||||    
T  47010147 ccagtgctccaggggcaccggttagcagga 47010176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 30294513 - 30294379
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30294513 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttctttttatggtaataattcccttttatggtatgcttaa 30294414  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    || |||  |||| | |||| |||||||||| ||||    
T  30294413 cctgtgctccggggacaccggttagcaggacccat 30294379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 3784845 - 3784720
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  3784845 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcaaaaacaattttcttttatggtaataatttccttttatggtatgcttaa 3784746  T
Q  179 ccagtgtcccggaggcaccagttagc 204  Q
    || ||||||||| |||||| ||||||    
T  3784745 cccgtgtcccgggggcaccggttagc 3784720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 213
Target Start/End: Complemental strand, 9266860 - 9266726
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  9266860 ttatatagtatttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatggtaataattcgcttttatggtatacttaa 9266761  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    ||||||  || || ||||| |||||||||| ||||    
T  9266760 ccagtgctccagaagcaccggttagcaggacccat 9266726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 12306978 - 12307076
Alignment:
Q  86 gtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  |||||||||||||||||||||||    
T  12306978 gtagttaatacattgaaattgtgtaattaatttataataaagtcaaaaacagattccttttatggtaataattctcttttatggtatgcttaaccagtg 12307076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 17333414 - 17333287
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| |||| ||||||||||  |||||    
T  17333414 ttatatagtagttaatgcattgaaattgtgtaattaattcataataaagtcaaaaacagtttccttttatgataatacttcccttttatggta--cttaa 17333317  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||| || |||||||||||| ||||||||||    
T  17333316 ccaatgccccggaggcaccggttagcagga 17333287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 50128300 - 50128175
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||||  |||||||||||||||||||||    
T  50128300 atagtagttaatgcattgaaattgtgtaattaatttataataaagttaaaagcagtttcattttatggtaataattctcttttatggtatgcttaaccag 50128201  T
Q  183 tgtcccggaggcaccagttagcagga 208  Q
    |||||| ||  |||| ||||||||||    
T  50128200 tgtcccagaaacaccggttagcagga 50128175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 51368917 - 51368812
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  51368917 ttatatagtagttaatgcattgaaattgtgtagttaatttataataatgtcaaaaatagtttccttttatagtaataattccattttatggtatgcttaa 51368818  T
Q  179 ccagtg 184  Q
    ||||||    
T  51368817 ccagtg 51368812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 3097713 - 3097817
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  3097713 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataatttccttttatggtatgcttaa 3097812  T
Q  179 ccagt 183  Q
    |||||    
T  3097813 ccagt 3097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 13961211 - 13961370
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| |||||||||||||| ||||||||||||              |||||||||||||||| |||||||||||||||||||||| ||    
T  13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatataaaaaaaaaa----ttatatagtagttaatgcattgaaattgtgtaattaattgat 13961306  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||| |||||||||||||| ||||||||||||||||   |||||||||||||||||||||||    
T  13961307 aataaagtcaaaaacagtttcattttatggtaataattttcttttatggtatgcttaaccagtg 13961370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 6770391 - 6770501
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||| |||||||||    
T  6770391 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttatgataataattcccttttatgatatgcttaa 6770490  T
Q  179 ccagtgtcccg 189  Q
    ||||| |||||    
T  6770491 ccagtatcccg 6770501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 29683193 - 29683355
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||              |||||||||||||||| ||||||||| || |||||||||||    
T  29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaa--ttatatagtagttaatgcattgaaatcgtataattaattta 29683290  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    ||||||| |||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||    
T  29683291 taataaagtcaaaaacagtttcattttatagtaataattcacttttatggtatgcttaaccagtg 29683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 35985753 - 35985648
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  35985753 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtgaaaaacagtttccttttatggtaataattcccatttatagtatacttaa 35985654  T
Q  179 ccagtg 184  Q
    ||||||    
T  35985653 ccagtg 35985648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 41730367 - 41730496
Alignment:
Q  84 tagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 183  Q
    ||||| ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||| |||    
T  41730367 tagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaacaagt 41730466  T
Q  184 gtcccggaggcaccagttagcaggatccat 213  Q
    | ||| || ||||  |||||||||| ||||    
T  41730467 gccccagaagcactggttagcaggacccat 41730496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 38702064 - 38701940
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||    ||||||||||||||||    
T  38702064 tatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagttttcttttatggtaataattc----ttatggtatgcttaac 38701969  T
Q  180 cagtgtcccggaggcaccagttagcagga 208  Q
    ||||| ||||  |||||| ||||||||||    
T  38701968 cagtgccccgagggcaccggttagcagga 38701940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 30657662 - 30657793
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||      |||||| |||||||||| |||||||||||||||||    
T  30657662 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacag------tttatgataataattcccttttatggtatgcttaa 30657755  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataat 216  Q
    |||||  ||||||||||||  ||||||||| |||||||    
T  30657756 ccagtaccccggaggcaccgattagcaggacccataat 30657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 14350409 - 14350282
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||  || |||||||||||||    
T  14350409 ttatattgtagttaatgcattaaaattgtgtaattaatttataataatgtcaaaaacaatttccttttatggtaataattcc-cttaatggtatgcttaa 14350311  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||||| ||||||||||    
T  14350310 ccagtgccccgg-ggcaccggttagcagga 14350282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 45431332 - 45431437
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  45431332 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattctcttttatgatatacttaa 45431431  T
Q  179 ccagtg 184  Q
    ||||||    
T  45431432 ccagtg 45431437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 45449376 - 45449247
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| |||| |||||||||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||| ||||    
T  45449376 ttatatagtagttaatgcattaaaatagtgtaattaaattataataaagtcaaaagcagtttccttttatggtaataattgccttttatggtatgtttaa 45449277  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||| | |||| | ||||||||||    
T  45449276 ccagtgccccaggggcatcggttagcagga 45449247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 48071536 - 48071637
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||| ||||||||||    
T  48071536 ttatataatagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattatcttttatagtatgcttaa 48071635  T
Q  179 cc 180  Q
    ||    
T  48071636 cc 48071637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 8473046 - 8472936
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||  ||||||||||| |||||    
T  8473046 ttatataatagttaatgcattaaaattgtgtaattaatttataataaagtcaaaaacagtttcattttataataataattctcttttatggtatacttaa 8472947  T
Q  179 ccagtgtcccg 189  Q
    |||||||||||    
T  8472946 ccagtgtcccg 8472936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 30217822 - 30217950
Alignment:
Q  85 agtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    |||||||||| |||| ||||| | |||||||||||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||||||| |||||    
T  30217822 agtagttaatgcatttaaattatttaattaatttataataaagtcaaaaatagttttcttttatggtaataatttctttttatggtatgcttaa-cagtg 30217920  T
Q  185 tcccggaggcaccagttagcaggatccataa 215  Q
     ||| |||||||| |||||||||| ||||||    
T  30217921 -ccccgaggcacctgttagcaggacccataa 30217950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 43286776 - 43286882
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| ||||||||   |||||||| |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||  |||||||||||||||||    
T  43286776 ttatataatagttaatgttttgaaattatgtaattaatttataataaagtcaaaaatagtttccttttatagtaataattctcttttatggtatgcttaa 43286875  T
Q  179 ccagtgt 185  Q
    |||||||    
T  43286876 ccagtgt 43286882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 47532802 - 47532677
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||| ||||||| | |||||||||||  |||||||||| |||||||||||||||||    
T  47532802 ttatatagtagttaatgcattgaaattgtgtaattaatg-ataataaagtcaaaaataatttccttttataataataattcccttttatggtatgcttaa 47532704  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    ||| || |||| || |||| |||||||    
T  47532703 ccaatgccccgaagacaccggttagca 47532677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 48383234 - 48383141
Alignment:
Q  88 agttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    |||||||  ||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  48383234 agttaatgtattgaaataatgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacca 48383141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 38335223 - 38335317
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatg 173  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||  ||||||||||||    
T  38335223 ttatatagtaattaatgcattgtaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattcacttttatggtatg 38335317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 29210467 - 29210540
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  29210467 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggta 29210540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 37503268 - 37503346
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||    
T  37503268 ttatatagtagttaatacattgaaattgtgtaattaatttataa-aaaatcaaaaatattttccttttatggtaacaatt 37503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 52431635 - 52431761
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataa-ttccattttatggtatgctta 177  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||  |||||| || ||| ||||||||||||||| |||| |||| |||||||||||    
T  52431635 ttatatagtagttaatgcattgaaattgtgtaattaatttataa-aatgtcaaaagcaattttcttttatggtaataatttcctttttttggtatgctta 52431733  T
Q  178 accagtgtcccggaggcaccagttagca 205  Q
    ||||||| ||| | | |||| |||||||    
T  52431734 accagtgccccagggacaccggttagca 52431761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 179
Target Start/End: Complemental strand, 37315399 - 37315300
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| ||||||| |||||||| |||||||| | |||| ||||||||||||    
T  37315399 ttatatagtagttaatgcattgaaattatgtaattaatttataa-aaagtcaaagacagttttcttttatgctaataatttctttttttggtatgcttaa 37315301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 23473596 - 23473461
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||| |||||||  ||||||||||| |||||||||||||||||| |  ||| |||||||||||||||||||||||| | ||||||  |||||||||    
T  23473596 ttatatagcagttaatgtattgaaattgtataattaatttataataaagtttaaagcagtttccttttatggtaataatttctttttataatatgcttaa 23473497  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    || |||  |||  || ||| |||||||||| |||||    
T  23473496 cctgtgctccgagggtaccggttagcaggacccata 23473461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 19010778 - 19010714
Alignment:
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  19010778 taataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgattaaccagtg 19010714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 52749656 - 52749764
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| ||||||||  ||||||||||| || | |||||| |||||| | ||||||| |||  |||||||||||||||||| |||||||||||| ||||    
T  52749656 ttatataatagttaatgtattgaaattgtatactaaatttacaataaagttaaaaacaatttttttttatggtaataattcctttttatggtatgtttaa 52749755  T
Q  179 ccagtgtcc 187  Q
    || ||||||    
T  52749756 ccggtgtcc 52749764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 15282646 - 15282591
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaa 134  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  15282646 ttatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaa 15282591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 26228247 - 26228300
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaa 132  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  26228247 ttatatagtagttaatgcattgaaattatgtaattaatttataataaaatcaaa 26228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 14881086 - 14881036
Alignment:
Q  104 ttgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaat 154  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  14881086 ttgtataattaatttataataaagtcaaaaacagtttccttttatggtaat 14881036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 35700782 - 35700676
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |  ||  ||||||| |||||| | | |||| || ||| |||||    
T  35700782 ttatacagtagttaatacattgaaattgtgtaattaatttataa-aaagtcaaaaaaaaatt-tttttatgataataacttccttttttgatatccttaa 35700685  T
Q  179 ccagtgtcc 187  Q
    |||||||||    
T  35700684 ccagtgtcc 35700676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 3838909 - 3838783
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataa-ttccattttatggtatgctta 177  Q
    ||||||| |||||||| |||| |||||||||||||||||||||| ||  |||||| || |||  |||||||| ||||| |||| |||| | |||||||||    
T  3838909 ttatataatagttaatgcattaaaattgtgtaattaatttataa-aatgtcaaaagcaatttttttttatggcaataatttcctttttttagtatgctta 3838811  T
Q  178 accagtgtcccggaggcaccagttagca 205  Q
    | ||||  ||||  ||||||||||||||    
T  3838810 atcagtaccccgagggcaccagttagca 3838783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 28726094 - 28726051
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  28726094 aagggaaatgctaaccggtgcccccggggcactggttaaggata 28726051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 38595939 - 38595898
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  38595939 gggaaatgctaaccggtgcccccggggcactggttaaggata 38595898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 39497361 - 39497430
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttat 148  Q
    |||||||||||||||| |||| ||||| | |||||||||||||||||| ||||||| | ||| |||||||    
T  39497361 ttatatagtagttaatgcattaaaattatataattaatttataataaagtcaaaaataattttcttttat 39497430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 19011095 - 19011057
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttata 121  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  19011095 atagtagttaatgcattgaaattgtgtaattaatttata 19011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 29210531 - 29210577
Alignment:
Q  162 ttttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  29210531 ttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 29210577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 28481906 - 28481954
Alignment:
Q  91 taatacattgaaattgtgtaattaatttataataaaatcaaaaacagttt 140  Q
    |||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  28481906 taatgcattaaaattgtgtaattaatttataataaaat-aaaaacagttt 28481954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 52702332 - 52702291
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  52702332 gggaaatgctaaccggtgctcccggggcactggttaaggata 52702291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15227737 - 15227781
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||    
T  15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatat 15227781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 28725977 - 28725901
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||| ||||| | |||| ||||||| || ||||||    
T  28725977 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccggggacaccggttagcaagacccataa 28725901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 29210412 - 29210451
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  29210412 agggaaatgctaaccggtgcctccggggcactggttaagg 29210451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 32092376 - 32092415
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    |||||||| ||||| |||||||||||||||||||||||||    
T  32092376 gggaaatgttaaccaatgcccccggggcactggttaagga 32092415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 39081855 - 39081933
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||| ||||||||  ||||||||| | |||||||||||||| || || |||| ||||||| ||||||| ||||||||    
T  39081855 ttatatactagttaatgtattgaaattttataattaatttataa-aatattaaaagcagtttcattttatgataataatt 39081933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 39912411 - 39912368
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataa 122  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||    
T  39912411 ttatatactagttaatgcattgaaattgtgtgattaatttataa 39912368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 10679629 - 10679695
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||  ||||||||| |||||| |||||||    
T  10679629 ttccttttatggtaaaaatttcttttttttgtatgcttaacaggtgtcccgggggcaccggttagca 10679695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 17333467 - 17333426
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  17333467 gggaaatgctaaccggtgccccc-gggcactggttaaggatat 17333426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 30664239 - 30664173
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||| ||||  |||||| |||||||    
T  30664239 ttccttttatggtaagaatttcttttttttgtatgcttaaccagtgccccgtgggcaccggttagca 30664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 38595824 - 38595758
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| ||||   |||| | | |||||||||||||| |||||||||||| |||||||    
T  38595824 ttccttttatggtaagaattttctttttttgcatgcttaaccagtgccccggaggcaccggttagca 38595758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 30657605 - 30657650
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  30657605 aaagggaaatgctaaccggtgctcccggggcactagttaagcatat 30657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 48383294 - 48383257
Alignment:
Q  25 aaatgctaaccgatgcccccggggcactggttaaggat 62  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  48383294 aaatgctaaccggtgctcccggggcactggttaaggat 48383257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 9266916 - 9266872
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||| |||||| || ||||| ||||||||||||||||||    
T  9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatat 9266872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 14350465 - 14350421
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||    
T  14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtat 14350421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 19940719 - 19940683
Alignment:
Q  25 aaatgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  19940719 aaatgttaaccggtgcccccggggcactggttaagga 19940683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 23473648 - 23473608
Alignment:
Q  24 gaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||| |||||||| |||||| |||||||||||||    
T  23473648 gaaatgctaactgatgcccctggggcattggttaaggatat 23473608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 26228300 - 26228332
Alignment:
Q  147 atggtaataattccattttatggtatgcttaac 179  Q
    |||||||||||||| ||||||||||||||||||    
T  26228300 atggtaataattcccttttatggtatgcttaac 26228332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 38702117 - 38702077
Alignment:
Q  24 gaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||| ||| ||||||||||||||||||| |||    
T  38702117 gaaatgctaaccggtgctcccggggcactggttaagggtat 38702077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43286720 - 43286764
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||| ||||||||||||||| ||| ||| ||||||||||||||||    
T  43286720 aaggaaaatgctaaccgatgtccctgggacactggttaaggatat 43286764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 8787393 - 8787522
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8787393 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatatcaaaaacagtttccttttatgataataattccattttatggtatgcttaa 8787492  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| ||||| |||||| ||||||||||    
T  8787493 cctgtgccccgggggcaccggttagcagga 8787522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 34650965 - 34650836
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34650965 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 34650866  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||||| ||||||||||    
T  34650865 ccagtgccccgggggcaccggttagcagga 34650836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 13661805 - 13661991
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||              |||||||||||||||| ||||||||||||||||||||||     
T  13661805 aaagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattg 13661901  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||| ||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  13661902 ataataaagtcagaaacagtttccttttatggtaataattctcttttatggtatgcttaacccgtgccccggaggcaccggttagcagga 13661991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 208
Target Start/End: Original strand, 35132519 - 35132704
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||    
T  35132519 aaagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaa---ttatatagtagttaatacattgaaattgtgtaattaattt 35132615  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||| ||||||||||||| | ||||||||||||||||  |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  35132616 ataataaagtcaaaaacagttttc-tttatggtaataattctcttttatggtatgcttaaccaatgccccgggggcaccggttagcagga 35132704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 11958099 - 11957970
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11958099 ttatatagtagttaatgcaatgaaattgtgtaattaattgataataaagtcaaaaacagtttccttttatggtaataattcccttttatggcatgcttaa 11958000  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||| | |||||| ||||||||||    
T  11957999 ccagtgccccaggggcaccggttagcagga 11957970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 35504372 - 35504244
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||    
T  35504372 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagttcccttttatggcaataattcccttttatggtatgcttaa 35504273  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || |||| |||| |||||| ||||||||||    
T  35504272 cccgtgt-ccgggggcaccggttagcagga 35504244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 214
Target Start/End: Complemental strand, 21547526 - 21547391
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||   ||||||||||||||||    
T  21547526 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcattttaagttaataattctcatttatggtatgcttaa 21547427  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||  ||||||| |||| |||||||||| |||||    
T  21547426 ccagtaccccggagacaccggttagcaggacccata 21547391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 11846126 - 11846231
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||| |||||| ||||||||||    
T  11846126 ttatatagtagttaatacattgaaattgtgtaattaatttataataaagtcaaaagtagtttccttttatggtaataaatcccttttatagtatgcttaa 11846225  T
Q  179 ccagtg 184  Q
    ||||||    
T  11846226 ccagtg 11846231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 214
Target Start/End: Complemental strand, 10054540 - 10054350
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||              ||||||| || ||||| ||||||||||||||||||||||||    
T  10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatataataattaatgcattgaaattgtgtaattaattta 10054444  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccata 214  Q
    ||||||  |||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||| || ||| |||||||||| |||||    
T  10054443 taataatgtcaaaa-cagtttccttttatggtaataattcctttttatggtatgtttaacccgtgccccgggggtaccggttagcaggacccata 10054350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 12506350 - 12506455
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||| ||||||||    
T  12506350 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatagtaataattctcttttatggaatgcttaa 12506449  T
Q  179 ccagtg 184  Q
    ||||||    
T  12506450 ccagtg 12506455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 6283616 - 6283751
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||  |||||||||||||||||    
T  6283616 ttatataataattaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcatttttatggtatgcttaa 6283715  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||| ||  | |||||| ||||||| || |||||    
T  6283716 ccagtgccctaggggcaccggttagcatgaaccata 6283751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 40564536 - 40564434
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||||||||  |||||||||||||||||    
T  40564536 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttttttttatggtaataattctcttttatggtatgcttaa 40564437  T
Q  179 cca 181  Q
    |||    
T  40564436 cca 40564434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 20175281 - 20175386
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||| ||||||  |||||||||    
T  20175281 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatgataataattcccttttataatatgcttaa 20175380  T
Q  179 ccagtg 184  Q
    | ||||    
T  20175381 ctagtg 20175386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 4268620 - 4268739
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||   |||| |||||||||||||| |    
T  4268620 atagtagttaatgcattaaaattgtgtaattaatttataa-aaaataaaaaacagtttccttttatggtaataattttcttttttggtatgcttaacccg 4268718  T
Q  183 tgtcccggaggcaccagttag 203  Q
    ||||| || |||||| |||||    
T  4268719 tgtccagggggcaccggttag 4268739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 40057361 - 40057497
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||| | ||||||||| || ||||||||||||||||||||||||| |||||| ||||||| |||||| |||| ||||||| | || ||||    
T  40057361 ttatatagtagttagtgcattgaaatagtataattaatttataataaaatcaaaagcagttttcttttatagtaatatttcccttttatgatgtgtttaa 40057460  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    |||||| ||  |||||||| |||||||||| ||||||    
T  40057461 ccagtgacctcgaggcaccggttagcaggacccataa 40057497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 9721739 - 9721640
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  9721739 ttatatagtaattaatgcattgaaattgtttaattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgtttaa 9721640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 10956006 - 10956109
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||| | ||||||| |||||||||    
T  10956006 ttataaagtagttaatgcattgaaattgt-taattaatttataacaaagtcaaaaacaatttccttttatggtaataatttccttttatgatatgcttaa 10956104  T
Q  179 ccagt 183  Q
    |||||    
T  10956105 ccagt 10956109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 31909685 - 31909793
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||     || ||||||||   |||||||||||||||||    
T  31909685 ttatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaacagtttcc-----tgataataattttcttttatggtatgcttaa 31909779  T
Q  179 ccagtgtcccggag 192  Q
    ||||| ||||||||    
T  31909780 ccagtatcccggag 31909793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 13470207 - 13470283
Alignment:
Q  81 atatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataat 157  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13470207 atatagtagtcaatgcattgaaattgtataattaatttataataaagtcaaaaacagtttccttttatggtaataat 13470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 152
Target Start/End: Original strand, 10069969 - 10070095
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||||||||||||||||||||||||              |||||||||||||||| |||||||||||||||||||| | |||    
T  10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaa-tgata 10070064  T
Q  122 ataaaatcaaaaacagtttccttttatggta 152  Q
    ||||| |||||||||||||| ||||||||||    
T  10070065 ataaagtcaaaaacagtttctttttatggta 10070095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 39067059 - 39066973
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatg 173  Q
    ||||||||| ||||||||| |||||||||||||||||||| ||||||||| | ||||||||||||||||||||  ||||||| ||||    
T  39067059 tagttaatatattgaaattatgtaattaatttataataaagtcaaaaacaatatccttttatggtaataattctcttttatgttatg 39066973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 19647790 - 19647717
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||    
T  19647790 ttatatagtagttaatgcattgaaattgtataattaattgataataaagtcataaacagtttccttttatggta 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 4837311 - 4837369
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacag 137  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  4837311 ttatatagtaattaatgcattgaaattgtgtaattaatttataataaagtcaaatacag 4837369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 19436968 - 19436864
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||| |||||  |||||||||||| ||||||||||||| |||| | ||||| |||||  |||||||||||||||||  |||||||||||| || |    
T  19436968 ttatatagtggttaaagcattgaaattgtataattaatttata-taaagttaaaaatagtttt-ttttatggtaataattctcttttatggtatgtttca 19436871  T
Q  179 ccagtgt 185  Q
    |||||||    
T  19436870 ccagtgt 19436864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 10956009 - 10955957
Alignment:
Q  153 ataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    |||||||| ||||||||||||||||||||||| |||||||||| |||||||||    
T  10956009 ataattcccttttatggtatgcttaaccagtgccccggaggcaacagttagca 10955957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 16972174 - 16972217
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  16972174 aagggaaatgctaaccgatgcccccggagcactggttaaggata 16972217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 39069434 - 39069527
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaa-tcaaaaacagtttccttttatggtaataattccattttatggtatgc 174  Q
    |||||||||||||||| |||| ||||||||||||||   ||||||||   | ||||||| ||||||||||||||||||||||  ||||||| |||||    
T  39069434 ttatatagtagttaatgcattaaaattgtgtaatta---tataataattgtgaaaaacaatttccttttatggtaataattctcttttatgatatgc 39069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 21945050 - 21945006
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  21945050 aaagggaaatgctaaccggtgcctccggggcactggttaaggata 21945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 2619689 - 2619642
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaa 126  Q
    |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  2619689 ttatttagtagttaatgtattgaaattgtgtaattaatttataataaa 2619642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 14214121 - 14214055
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||| ||||||||| |||||| |||||||    
T  14214121 ttccttttatggtaagaatttcctttttttgtatgcttaaccggtgtcccgggggcaccggttagca 14214055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 1383346 - 1383279
Alignment:
Q  139 ttccttttatggtaataatt-ccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| || |||| | |||||||||||| ||||||| |||||||| |||||||    
T  1383346 ttccttttatggtaagaatttccttttttttgtatgcttaacccgtgtcccagaggcaccggttagca 1383279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 11958153 - 11958111
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| |||||||||||||| |||||| |||||    
T  11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatat 11958111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 35504426 - 35504384
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| |||||||||| |||||||||||| |||    
T  35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtat 35504384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 1919653 - 1919620
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| ||||||||||||||||||||||||    
T  1919653 tgctaaccggtgcccccggggcactggttaagga 1919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 13470148 - 13470193
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||    
T  13470148 aaagggaaatgctaaccggtgcctatggggcactggttaaggatat 13470193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 32188176 - 32188139
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaag 59  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  32188176 gggaaatgctaaccgatgcctccgaggcactggttaag 32188139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 40608722 - 40608681
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| ||| |||||| |||||||||||||||    
T  40608722 gggaaatgctaaccggtgctcccgggacactggttaaggata 40608681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 8787337 - 8787377
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  8787337 aagggaaatgctaaccggtgtccccggggcattggttaagg 8787377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 392096 - 392279
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| ||||||||||||||||||||||||||    
T  392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaatttata 392192  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  392193 ataatgtcaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 392279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 32929702 - 32929511
Alignment:
Q  14 tactgaaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaatt 113  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||||| |||              ||||||| || ||||| ||||||||||||||||||    
T  32929702 tacttaaagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaa---ttatatattaattaatgcattgaaattgtgtaatt 32929606  T
Q  114 aatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  32929605 aatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 32929511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 12145249 - 12145112
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| | |||||| ||||||||||    
T  12145249 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataatttccttttatagtatgcttaa 12145150  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataat 216  Q
    ||||||  ||||||||||| |||||||||| |||||||    
T  12145149 ccagtgctccggaggcaccggttagcaggacccataat 12145112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 79 - 206
Target Start/End: Complemental strand, 32985325 - 32985198
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  32985325 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaa 32985226  T
Q  179 ccagtgtcccggaggcaccagttagcag 206  Q
    |||||| ||||| |||||| ||||||||    
T  32985225 ccagtgccccgggggcaccggttagcag 32985198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 26467256 - 26467130
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||  |||    
T  26467256 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatggtatgtctaa 26467157  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||| |||||||||||| |||||||    
T  26467156 ccagtgccccggaggcaccggttagca 26467130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 23402192 - 23402321
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  23402192 ttatatagtaattaatgcattgaaattgtgaaattaatttataataaagtcaaaaacagtttccttttatggtaataattaccttttatggtatgcttaa 23402291  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || ||| |||||||||||| ||||||||||    
T  23402292 cccgtgccccggaggcaccggttagcagga 23402321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 3515763 - 3515955
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||              |||||||||||||||| |||||||||||||||||||||||    
T  3515763 aaagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 3515859  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||| | |||||| |||||||||| |||||    
T  3515860 ataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgtttaacctgtgccccaggggcaccggttagcaggacccata 3515955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 4215749 - 4215878
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  4215749 ttatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaa 4215848  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||| | ||||||||||    
T  4215849 ccagtgccccgggggcatcggttagcagga 4215878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 2350706 - 2350832
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  2350706 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggtaataattcccttttatgatatgcttaa 2350805  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||  ||||||| |||| |||||||    
T  2350806 ccagtaccccggagacaccggttagca 2350832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 7851347 - 7851191
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||              |||||||||| ||||| |||| |||||||||||||||||||    
T  7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaa---ttatatagtaattaatgcattaaaattgtgtaattaattta 7851251  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7851250 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 7851191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 1391310 - 1391204
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||||||||    
T  1391310 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacagttttcttttatgataataattcccttttatggtatgcttaa 1391211  T
Q  179 ccagtgt 185  Q
    |||||||    
T  1391210 ccagtgt 1391204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 18276747 - 18276615
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatgg---tatgct 175  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||   ||||||    
T  18276747 ttatatagtagttaatgcattgaatttgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataatttccttttatggtattatgct 18276648  T
Q  176 taaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||| ||| | |||||| ||||||||||    
T  18276647 taaccagtgcccctggggcaccggttagcagga 18276615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 2581006 - 2581135
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  2581006 ttatatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaataatttccttttatggtaataattcccttttatggtatgcttaa 2581105  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||| |  |||||  ||||| ||||||||||    
T  2581106 ccaataccccgggagcaccggttagcagga 2581135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 35043944 - 35044054
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  35043944 ttatatagtagttaattcattgaaattgtgta-ttaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaa 35044042  T
Q  179 ccagtgtcccgg 190  Q
    |||||| |||||    
T  35044043 ccagtgccccgg 35044054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 205
Target Start/End: Original strand, 27433491 - 27433672
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| |||| ||||||||||||||||||||    
T  27433491 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattaaaattgtgtaattaatttat 27433587  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
     ||||  ||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||  ||||| |||||| |||||||    
T  27433588 cataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 27433672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 29451247 - 29451146
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  29451247 ttatatagtagttaatgcattgaaattgtgtaattaaattataataaagtcaaacacagtttccttttatgataataattcccttttatggtatgcttaa 29451148  T
Q  179 cc 180  Q
    ||    
T  29451147 cc 29451146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 3026141 - 3026013
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| |||||||||| |||||||||||| |||||||||||||||||  ||||||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  3026141 ttatacagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacagttttcttttatcgtaataattctcttttatggtatgcttaa 3026042  T
Q  179 ccagtgtcccggaggcaccagttagcagg 207  Q
     ||||||||||  |||||| |||||||||    
T  3026041 tcagtgtcccgagggcaccggttagcagg 3026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 12525773 - 12525878
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||||| |||||||||||||||||| ||||||| |||||||||    
T  12525773 ttatatagtagttaatacattgaaaatgtgtaattaatttataataatgtcaaacacagtttcattttatggtaataattcccttttatgatatgcttaa 12525872  T
Q  179 ccagtg 184  Q
    | ||||    
T  12525873 ctagtg 12525878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 25165545 - 25165416
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||  ||||| | |||||||||    
T  25165545 ttatatagtagttaatatattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatgataataattctcttttacgatatgcttaa 25165446  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||| || || ||  ||||| ||||||||||    
T  25165445 ccaatgccctgggagcaccggttagcagga 25165416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 28225274 - 28225391
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  28225274 ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaa 28225373  T
Q  179 ccagtgtcccggaggcac 196  Q
     ||||| |||| ||||||    
T  28225374 acagtgacccgaaggcac 28225391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 11115227 - 11115118
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||||||||||| ||||||| |||| ||||    
T  11115227 ttatataatagttaatacattgaaattgtgtaattaatttataat--aatcaaaaatagttttcttttatggtaataattcccttttatgatatgtttaa 11115130  T
Q  179 ccagtgtcccgg 190  Q
    |||||| |||||    
T  11115129 ccagtgccccgg 11115118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 31280375 - 31280505
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||  |||||||| |||||||||||| ||||||||||     ||||||||||||||    
T  31280375 ttatatagtagttaatgcattgaaattgtataattaatttataataatgtcaaaaacggtttccttttatagtaataattc-----tatggtatgcttaa 31280469  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    | |||| |||||||||||| |||||||||| ||||||    
T  31280470 cgagtg-cccggaggcaccggttagcaggacccataa 31280505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 5323454 - 5323572
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||  |||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| |||    
T  5323454 ttatatagtaattaaagcattaaaattatgtaattaatttataataaagtcaaaaacaatttccttttatggtaataattcccttttatggtatgcgtaa 5323553  T
Q  179 ccagtgtcccggaggcacc 197  Q
    || ||| || |||||||||    
T  5323554 ccggtgccctggaggcacc 5323572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 34851981 - 34851852
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| | ||||||||||| ||||||||||  ||||||  |||||||||    
T  34851981 ttatatagtagttaatgcattgaaattgtgtaattgatttataataaagtcaaaaataatttccttttatagtaataattctcttttataatatgcttaa 34851882  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| |||| | ||||  |||||||||    
T  34851881 ccagtgttccggtgacaccgattagcagga 34851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 13417094 - 13416967
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaa---tcaaaaacagtttccttttatggtaataattccattttatggtatgct 175  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||| |   ||||||||||||| ||||||||||||||||||  ||||||  ||||||    
T  13417094 ttatatattagttaatgtattgaaattgtgtaattaatttataataataaagtcaaaaacagttttcttttatggtaataattctcttttataatatgct 13416995  T
Q  176 taaccagtgtcccggaggcaccagttagc 204  Q
    ||||||||| |||||||||||| ||||||    
T  13416994 taaccagtg-cccggaggcaccggttagc 13416967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 961063 - 961164
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| ||| ||||| |||||||||||| |||||||||  |||||||||||||||||    
T  961063 ttatatagtagttaatgcattaaaattgtgtaattaattgataataaagtcagaaacaatttccttttatgataataattctcttttatggtatgcttaa 961162  T
Q  179 cc 180  Q
    ||    
T  961163 cc 961164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 1840379 - 1840274
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || |||||  ||| |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||| |||| ||||    
T  1840379 ttatataataattaatgtattaaaattgtgtaattaatttataataaagttaaaaacagtttcctttcatggtaataattcccttttatgatatgtttaa 1840280  T
Q  179 ccagtg 184  Q
    ||||||    
T  1840279 ccagtg 1840274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 20897946 - 20898075
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||              |||||||||||||||| |||||||||||||||||||||| |    
T  20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattga 20898042  T
Q  120 taataaaatcaaaaacagtttccttttatggta 152  Q
    ||||||| ||| |||||||||||||||||||||    
T  20898043 taataaagtcagaaacagtttccttttatggta 20898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 21878479 - 21878398
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattcc 160  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  21878479 ttatatagtagttaatgcattgaaattatttaattaatttataataaagtcaaaaacagtttctttttatggtaataattcc 21878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 29978286 - 29978389
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| |||||  ||||||||| ||||||  |||||||||||| |||||||||||||  |||||||||||||||||| ||||||| |||||||||    
T  29978286 ttatatagtatttaatgtattgaaattatgtaatatatttataataaagtcaaaaacagtttaattttatggtaataattcccttttatgatatgcttaa 29978385  T
Q  179 ccag 182  Q
    ||||    
T  29978386 ccag 29978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 34477682 - 34477609
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  34477682 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 34477609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 167
Target Start/End: Original strand, 9661048 - 9661128
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttat 167  Q
    |||||||| |||||||||||| ||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||    
T  9661048 tagttaatgcattgaaattgtataattaatttaaaataaagttaaaagcagtttccttttatggtaataattccattttat 9661128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 34396659 - 34396596
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttcc 142  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  34396659 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttcc 34396596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 23629708 - 23629607
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||  |||||||   ||||||| ||| |||||    
T  23629708 ttatatagtagttaatgtattgaaattgtgtaattactttataataaagtcaaaaacaatttccttttatgacaataattttcttttatgttatacttaa 23629609  T
Q  179 cc 180  Q
    ||    
T  23629608 cc 23629607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Original strand, 13529509 - 13529554
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataata 124  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  13529509 ttatatagtagttaatgcattgaaattgtgtaattaatttataata 13529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 22417303 - 22417358
Alignment:
Q  135 cagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccgg 190  Q
    ||||||||||||||| |||||||||  ||||||||||||||||| ||||| |||||    
T  22417303 cagtttccttttatgctaataattctcttttatggtatgcttaatcagtgccccgg 22417358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 34706835 - 34706901
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||| ||||| |||||| |||||||    
T  34706835 ttccttttatggtaagaatttccttttttcgtatgcttaaccagtgccccgggggcaccggttagca 34706901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 34712312 - 34712271
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||| |||| |||||||||||||||||||||    
T  34712312 gggaaatgctaaccggtgcctccggggcactggttaaggata 34712271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 2350654 - 2350694
Alignment:
Q  24 gaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  2350654 gaaatgctaaccggtgctcccggggcactggttaaggatat 2350694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 23402136 - 23402180
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||    
T  23402136 aagggaaatgctaactggtgcctccggggcactggttaaggatat 23402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 34706717 - 34706761
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||    
T  34706717 aaagggaaatgctaaccggtgccccgggggcaccggttaaggata 34706761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 4215693 - 4215732
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaag 59  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  4215693 aagggaaatgttaaccggtgcccccggggcactggttaag 4215732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 59
Target Start/End: Complemental strand, 4215875 - 4215844
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaag 59  Q
    ||||||||||||||||||||||||||||||||    
T  4215875 tgctaaccgatgcccccggggcactggttaag 4215844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 28564322 - 28564388
Alignment:
Q  111 attaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||| | | |||| |||||| |||||    
T  28564322 attaatttataa-aatctcaaaaacagtttccttttatggtaataaattccttttttggtatccttaa 28564388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 22021735 - 22021844
Alignment:
Q  96 cattgaaa-ttgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggc 194  Q
    |||||||| |||||||||||||| ||||  || |||| || | ||||||||||||| ||||| | | |||| | ||||| ||||| |||| || ||||||    
T  22021735 cattgaaacttgtgtaattaattcataaataagtcaacaaaa-tttccttttatggaaataaattcctttttttgtatgattaactagtgccctggaggc 22021833  T
Q  195 accagttagca 205  Q
    |||||||||||    
T  22021834 accagttagca 22021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 10431790 - 10431827
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaat 116  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  10431790 ttatataatagttattacattgaaattgtgtaattaat 10431827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 12525716 - 12525757
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  12525716 aaagggaaatgctaaccggtgcctccggggtactggttaagg 12525757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 34396715 - 34396671
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||| ||||||| || ||| ||||||||||||    
T  34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatat 34396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 20552931 - 20553114
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||| ||||||||||||||||||||              |||||||||| ||||| |||||||||||||||||||||| |||    
T  20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaa---ttatatagtaattaatgcattgaaattgtgtaattaattgata 20553027  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  20553028 ataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 20553114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 44587902 - 44588085
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| |||||||||||||| ||||||||||||              |||||||||||||||||||||||||||||||||||||||||||    
T  44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaa---ttatatagtagttaatacattgaaattgtgtaattaatttata 44587998  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||| || ||| ||||||||||    
T  44587999 ataaagtaaaaaacagtttccttttatggtaataattcccttttatggtatgcttaacaagtgccccgggggtaccggttagcagga 44588085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 4381849 - 4381978
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4381849 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 4381948  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| |||||  ||||  ||||||||||    
T  4381949 ccagtgccccgggagcactggttagcagga 4381978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 30486208 - 30486393
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||| | |||||||||||||||||||||||||||              ||||||||||||||||  |||||||||||||||||||  ||    
T  30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgtattgaaattgtgtaattaaacta 30486304  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  30486305 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccggttagcagga 30486393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 22 - 208
Target Start/End: Original strand, 31438646 - 31438829
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttata 121  Q
    ||||||||||||||| ||| |||||||||||||||||||||||              ||||| |||||||||| ||||||||||||||||||||||||||    
T  31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaa---ttatacagtagttaatgcattgaaattgtgtaattaatttata 31438742  T
Q  122 ataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| | |||| ||||||||||    
T  31438743 ataaagtcaaaaacagtttccttttatgataataattcccttttatggtatgcttaaccagtgccccggggacaccggttagcagga 31438829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 208
Target Start/End: Complemental strand, 561707 - 561521
Alignment:
Q  19 aaagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattt 118  Q
    |||||||||||||||||| |||||||||||||||||||||||||||              |||||||||||||||| |||||||||||||||||||||||    
T  561707 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaa---ttatatagtagttaatgcattgaaattgtgtaattaattt 561611  T
Q  119 ataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||||| |||||| ||||||||||||||  |||||||||  ||||||||||||||||| ||||  |||||||||||| ||||||||||    
T  561610 ataataaagtcaaaatcagtttccttttataataataattctcttttatggtatgcttaatcagtaccccggaggcaccggttagcagga 561521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 34442664 - 34442536
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34442664 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaa 34442565  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||| | ||||||||||    
T  34442564 ccagtg-cccgggggcatcggttagcagga 34442536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 27856528 - 27856399
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  27856528 ttatataatagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatggtatgcttaa 27856429  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||| |||| | ||||||||||    
T  27856428 ccagtgccccgggggcatcggttagcagga 27856399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 79 - 215
Target Start/End: Original strand, 31390066 - 31390202
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31390066 ttatatagtagttaatgtattgaaattatgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 31390165  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    || |||  |||| ||||||  ||||||||| ||||||    
T  31390166 cccgtgctccgggggcaccgattagcaggacccataa 31390202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 225
Target Start/End: Original strand, 2898125 - 2898270
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||  |||||||||  |||||||||||| ||||    
T  2898125 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagttttcttctatcataataattctcttttatggtatgtttaa 2898224  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataatgaaagtatt 225  Q
     |||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  2898225 tcagtgtcccggaggcaccggttagcagga-ccataattaaattatt 2898270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 190
Target Start/End: Original strand, 6580244 - 6580354
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6580244 tatatagtagttaatgcattgaaattatgtaattaatttataataatgtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaac 6580343  T
Q  180 cagtgtcccgg 190  Q
    ||||| |||||    
T  6580344 cagtgccccgg 6580354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 22068507 - 22068323
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    |||||||||||||||   |||||||||||||||||||||||||||              ||||||||||||| || |||||||||||| ||||||||| |    
T  22068507 aagggaaatgctaacaagtgcccccggggcactggttaaggatat---gaaaaagggaattatatagtagtt-atgcattgaaattgtataattaattga 22068412  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  22068411 taataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccagtgccccgggggcaccgattagcagga 22068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 22887749 - 22887922
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    ||||||||||||||||||||| |||||||| |||||||||||||              |||||||||||||||| |||||||||| ||||||||||||||    
T  22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaa---ttatatagtagttaatgcattgaaattatgtaattaatttat 22887845  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcacc 197  Q
    |||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||| ||||||    
T  22887846 aataaagttaaaaacagtttccttttatggtaataattctcttttatggtatgcttaaccagtgctccgggggcacc 22887922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 26387196 - 26387091
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||||||    
T  26387196 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatgcttaa 26387097  T
Q  179 ccagtg 184  Q
    ||||||    
T  26387096 ccagtg 26387091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 32361056 - 32360872
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| ||||||||||||||||||||||||| |              ||||||| |||||||| |||||||||  | ||||||||| ||    
T  32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaa---ttatataatagttaatgcattgaaataatataattaattgat 32360960  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  32360959 aataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaaccaatgccccgggggcaccggttagcagga 32360872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 32860156 - 32860266
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  32860156 ttatatagtatttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttat-gtaataattctcttttatggtatgcttaa 32860254  T
Q  179 ccagtgtcccgg 190  Q
    ||||||||||||    
T  32860255 ccagtgtcccgg 32860266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 3668245 - 3668119
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||| ||||| ||||    
T  3668245 ttatatagtagttaatgcattgaaattgtgtaattaatttataataatgtcaaaaacagtttccttttatggtaataatttccttttatagtatgtttaa 3668146  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    |||||| ||||  |||||| |||||||    
T  3668145 ccagtgccccgagggcaccggttagca 3668119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 79 - 206
Target Start/End: Complemental strand, 8969539 - 8969412
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| | |||||| ||||||||||    
T  8969539 ttatatagtagttaatgcattgaaatagtgtaattaatttataataaagtcaaaagcagtttccttttatggtaataatttccttttatagtatgcttaa 8969440  T
Q  179 ccagtgtcccggaggcaccagttagcag 206  Q
    | |||| ||| | |||||| ||||||||    
T  8969439 ctagtgcccctggggcaccggttagcag 8969412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 1859219 - 1859321
Alignment:
Q  82 tatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacca 181  Q
    ||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  1859219 tatagtagttaatgcattgaaattatgtaattaatttataataaagtcaaaaacagttttcttttatggtaataattctcttttatggtatgcttaacca 1859318  T
Q  182 gtg 184  Q
    |||    
T  1859319 gtg 1859321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 4022607 - 4022482
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |||||||| | ||||||| |||| ||||||||    
T  4022607 atagtagttaatgtattgaaattctgtaattaatttataataaagtcagaaacagtttccttttatgataataatttccttttatgatatgtttaaccag 4022508  T
Q  183 tgtcccggaggcaccagttagcagga 208  Q
    |||||||| |||||| ||||||||||    
T  4022507 tgtcccgggggcaccggttagcagga 4022482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 22567656 - 22567785
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||  |||||||||||||||||    
T  22567656 ttatatagtagttaatgtattgaaattgtgtaattaatttataataaagtcaaaaataatttccttttatggtaataattctcttttatggtatgcttaa 22567755  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    || |||  || | |||||| ||||||||||    
T  22567756 cccgtgctccaggggcaccggttagcagga 22567785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 208
Target Start/End: Original strand, 27584792 - 27584920
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || ||||||| |||||    
T  27584792 ttatatagtagttaaagcattgaaattgtgtaattaatttataataaaatcaaaagcagtttccttttatggtaataattctcattcatggtatacttaa 27584891  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    |||||| |||||| ||| | ||||||||||    
T  27584892 ccagtg-cccggaagcagcggttagcagga 27584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 25782957 - 25782854
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtc 186  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  25782957 tagttaatgcattgaaattgtgtaattattttataataaagtcaaaaacaattttcttttatgataataattcccttttatggtatgcttaaccagtgtc 25782858  T
Q  187 ccgg 190  Q
    ||||    
T  25782857 ccgg 25782854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 38591006 - 38590904
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| ||||||||||  ||| ||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  38591006 ttatacagtagttaatgtattaaaattgtgtaattaattgataataaagtcaaaaacagttttcttttatggtaataattcccttttatggtatgcttaa 38590907  T
Q  179 cca 181  Q
    |||    
T  38590906 cca 38590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 11021354 - 11021259
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgc 174  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  11021354 ttatatggtagttaatgcattgaaattgtgtaattaatatataataaagtcaaaaacagttttcttttgtggtaataattcccttttatggtatgc 11021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 13574143 - 13574060
Alignment:
Q  97 attgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaacc 180  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  13574143 attgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataatttccttttatggtatgcttaacc 13574060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 38296231 - 38296310
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  38296231 ttatatagtaattaatacattgaaattgtgtaattaatttataataaagtcaaaaacagtttctttttatggtaataatt 38296310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 35851883 - 35851781
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||||||||  ||||||||||| |||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  35851883 ttatataatagttaatgcattgaaataatgtaattaattgataataaagtcaaaaacagtttcattttatggtaataattctcttttatggtatgcttaa 35851784  T
Q  179 cca 181  Q
    |||    
T  35851783 cca 35851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 43637218 - 43637343
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| | |||||  ||||| ||||    
T  43637218 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacaatttctttttatggtaataatttccttttacagtatgtttaa 43637317  T
Q  179 ccagtgtcccggaggcaccagttagca 205  Q
    || |||  |||| |||||| |||||||    
T  43637318 cccgtgctccgg-ggcaccggttagca 43637343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 83 - 208
Target Start/End: Complemental strand, 5093667 - 5093543
Alignment:
Q  83 atagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccag 182  Q
    |||||||||||| |||| |||||||||||||||||||||||||| |||||| || |||||||||||| |||||||| | |||||||||||| ||||| ||    
T  5093667 atagtagttaatgcattaaaattgtgtaattaatttataataaagtcaaaagcaatttccttttatgataataatttccttttatggtatgtttaactag 5093568  T
Q  183 tgtcccggaggcaccagttagcagga 208  Q
    || ||||| |||||| |||| |||||    
T  5093567 tgccccgg-ggcaccggttaacagga 5093543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 28601021 - 28601125
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||| |||||||| | |||||||||||| ||||||||| |||||||| | |||||||||||| |||||||||||||||||  |||||||||||||||||    
T  28601021 ttataaagtagtta-tgcattgaaattgtataattaattgataataaagttaaaaacagtttctttttatggtaataattctcttttatggtatgcttaa 28601119  T
Q  179 ccagtg 184  Q
    ||||||    
T  28601120 ccagtg 28601125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 39531878 - 39532011
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||| | | |||||| |||||| |||||||||||||| || | ||||  | |||||||||    
T  39531878 ttatatagtagttaatgcattgaaattgtgtaattaatttataa-agagtcaaaaccagttttcttttatggtaatattttc-tttttcgatatgcttaa 39531975  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||||| | |||||||| ||||||| || |||||    
T  39531976 ccagtgtctcagaggcaccggttagcatgacccata 39532011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 26891795 - 26891722
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26891795 ttatatattagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaatagtttccttttatggta 26891722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 29102415 - 29102306
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||  ||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||| |||||||||   ||||||| |||| ||||    
T  29102415 ttatatagcggttaatacattgaaattttataattaatttataataaagtcaaaaacagttttcttttatagtaataattatcttttatgatatgtttaa 29102316  T
Q  179 ccagtgtccc 188  Q
    ||| ||||||    
T  29102315 ccaatgtccc 29102306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 5881292 - 5881374
Alignment:
Q  96 cattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||||||| ||||||||   |||||||||||||||||    
T  5881292 cattgaaattgtgtaattaattgataataaagtcaaaaagagtttccttttatgataataattatcttttatggtatgcttaa 5881374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 25772176 - 25772269
Alignment:
Q  90 ttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagt 183  Q
    ||||| || |||||||||||||||||||||||||||| ||||||| | ||||| |||||| |||||||||| ||||||||||| ||||| ||||    
T  25772176 ttaatgcaatgaaattgtgtaattaatttataataaagtcaaaaataatttccctttatgataataattcccttttatggtatacttaatcagt 25772269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 15079090 - 15079012
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||    
T  15079090 ttatatagtagttaatgtattgaaattgtgtaattaatttataa-aaagtcaaaaacaatttccttttatgataataatt 15079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 15146686 - 15146789
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||| | |||||||||||| ||||||||    ||| ||||||| ||||    
T  15146686 ttatataatagttaatacattgaaattgtataattaatttataa-aaagtcaaaaataatttccttttatgataataattttcctttttggtatgtttaa 15146784  T
Q  179 ccagt 183  Q
    |||||    
T  15146785 ccagt 15146789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 34123156 - 34123078
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||| |||||||| | ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  34123156 ttatataatagttaatgctttgaatttgtgtaattaatttataa-aaagtcaaaaacagtttccttttatggtcataatt 34123078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 10820546 - 10820615
Alignment:
Q  87 tagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||||||||||| ||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  10820546 tagttaatacattgagattgt-taattaatttataa-aaagttaaaaacagtttccttttatggtaataatt 10820615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 29771417 - 29771457
Alignment:
Q  23 ggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29771417 ggaaatgctaaccgatgcccccggggcactggttaaggata 29771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 35851957 - 35851917
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaagg 60  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  35851957 aagggaaatgctaaccggtgcccccggggcactggttaagg 35851917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 45262024 - 45262100
Alignment:
Q  139 ttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcaggatccataa 215  Q
    |||||||||||||||||||| | |||| | ||||||||||||  |||||||| |||||| ||||||| || ||||||    
T  45262024 ttccttttatggtaataatttcttttttttgtatgcttaacctttgtcccgggggcaccggttagcatgacccataa 45262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 26891850 - 26891807
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||    
T  26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatat 26891807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 27856402 - 27856433
Alignment:
Q  28 tgctaaccgatgcccccggggcactggttaag 59  Q
    ||||||||||||||||||||||||||||||||    
T  27856402 tgctaaccgatgcccccggggcactggttaag 27856433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 27856584 - 27856545
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaag 59  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  27856584 aagggaaatgttaaccggtgcccccggggcactggttaag 27856545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 44854528 - 44854485
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggata 63  Q
    ||||||||||||||||| | | ||||||||||||||||||||||    
T  44854528 aagggaaatgctaaccggtactcccggggcactggttaaggata 44854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 44331843 - 44331952
Alignment:
Q  96 cattgaaa-ttgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggc 194  Q
    |||||||| |||||||||||||| ||||  || |||| || | ||||||||||||| ||||| | | |||| | ||||| ||||| |||| || ||||||    
T  44331843 cattgaaacttgtgtaattaattcataaataagtcaacaaaa-tttccttttatggaaataaattcctttttttgtatgattaactagtgccctggaggc 44331941  T
Q  195 accagttagca 205  Q
    |||||||||||    
T  44331942 accagttagca 44331952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 5443489 - 5443526
Alignment:
Q  25 aaatgctaaccgatgcccccggggcactggttaaggat 62  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  5443489 aaatgttaaccaatgcccccggggcactggttaaggat 5443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 31390010 - 31390054
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| | |||| |||||||||| |||||||||||    
T  31390010 aagggaaatgctaactggtgcctccggggcactagttaaggatat 31390054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 32860100 - 32860144
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||| |||||| |||||| ||||||| ||||||||||||    
T  32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggatat 32860144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 35470407 - 35470367
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaagga 61  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  35470407 agggaaatgttaaccggtgcctccggggcactggttaagga 35470367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 38591062 - 38591018
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||||| || ||| ||||||||||||||| ||||    
T  38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatat 38591018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 43993204 - 43993252
Alignment:
Q  100 gaaattgtgtaattaatttataataaaatcaaaaacagtttccttttat 148  Q
    |||||| | ||||||||| |||||||||||||||| | |||||||||||    
T  43993204 gaaattatataattaattgataataaaatcaaaaatattttccttttat 43993252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45261901 - 45261945
Alignment:
Q  20 aagggaaatgctaaccgatg-cccccggggcactggttaaggata 63  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||    
T  45261901 aagggaaatgctaaccggtgccccccagggcactggttaaggata 45261945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 14950 - 15085
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14950 ttatatagtagttaatgcactgaaattgtgtagttaatttataataaagtcaaaaacagtttccttttatggtaataattcccttttatggtatgcttaa 15049  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccata 214  Q
    |||||| |||||||||||  |||| ||||| |||||    
T  15050 ccagtgccccggaggcactggttaacaggacccata 15085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 14896 - 14938
Alignment:
Q  22 gggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    ||||||||||||||| || |||||||||||||||||| |||||    
T  14896 gggaaatgctaaccggtgtccccggggcactggttaaagatat 14938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 10771 - 10898
Alignment:
Q  86 gtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgt 185  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||     
T  10771 gtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaaacagtttccttttatggtaataattcccatttatggtatgcttaaccagtgc 10870  T
Q  186 cccggaggcaccagttagcaggatccat 213  Q
    | ||| |||| | |||||||||| ||||    
T  10871 ctcgggggcagcggttagcaggacccat 10898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 22959 - 23120
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||              |||||||||| ||||||||||||||||||||||||||||||    
T  22959 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaa---ttatatagtaattaatacattgaaattgtgtaattaattta 23055  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtg 184  Q
    ||||||| |||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||    
T  23056 taataaagtcaaaaacagtttccttttatgttaataattctcttttatggtatgtttaaccagtg 23120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 208
Target Start/End: Complemental strand, 6241 - 6113
Alignment:
Q  80 tatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaac 179  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  6241 tatatagtagttaatgcattggaattgtgtaattaaattataataaagtcaaaaacagtttccttttatggtaataatccccttttatggtatgtttaac 6142  T
Q  180 cagtgtcccggaggcaccagttagcagga 208  Q
    | ||| ||||| |||||| ||||||||||    
T  6141 ccgtgccccgggggcaccggttagcagga 6113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 6295 - 6254
Alignment:
Q  23 ggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  6295 ggaaatgctaaccggtgcccctggggcactggttaaggatat 6254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 213
Target Start/End: Original strand, 40973 - 41107
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||| | ||||||| |||||||||    
T  40973 ttatataatagttaatgcattgaaattatgtaattaatttataatgaagtcaaaaacagtttccttttatgataataatttccttttatgatatgcttaa 41072  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccat 213  Q
    |||||||||||||| |||| ||| |||||| ||||    
T  41073 ccagtgtcccggagacaccggttggcaggacccat 41107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 879 - 984
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||||  |||||||||||||||||    
T  879 ttatatagtagttaatgcattgaaattgtgtaattaatttataataaagtcaaaatcaatttccttttatagtaataattctcttttatggtatgcttaa 978  T
Q  179 ccagtg 184  Q
    ||||||    
T  979 ccagtg 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 68478 - 68293
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaattta 119  Q
    ||||||||||||||| | |||||||||||||||||||||||||||              |||||||||||||||| |||| ||||||||||| ||| |||    
T  68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaa---ttatatagtagttaatgcattaaaattgtgtaaataaatta 68382  T
Q  120 taataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||  |||| ||||| | ||||||||||    
T  68381 taataaagttaaaatcagtttccttttaaggtaataattcccttttatggtatgcttaaccagtaccccgaaggcatcggttagcagga 68293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 53872 - 53691
Alignment:
Q  21 agggaaatgctaaccgatgcccccggggcactggttaaggatatnnnnnnnnnnnnnnttatatagtagttaatacattgaaattgtgtaattaatttat 120  Q
    |||||||||||||||| ||||||||||||||||||||||| |||              |||||||||||||||| |||| ||||||||||||||||||||    
T  53872 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaa---ttatatagtagttaatgcattaaaattgtgtaattaatttat 53776  T
Q  121 aataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccggaggcaccagttagca 205  Q
     ||||  ||||||| ||||||||||||||||||||||||| |||||||||||| |||||| ||  ||||| |||||| |||||||    
T  53775 cataatgtcaaaaatagtttccttttatggtaataattcccttttatggtatgtttaacccgttccccgggggcaccggttagca 53691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 25772 - 25889
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  25772 ttatatagtaattaatgtattgaaattgtgtaattaatttataataaagtcaaaaacaattttcttttatggtaataattcccttttatggtatccttaa 25871  T
Q  179 ccagtgtcccggaggcac 196  Q
     ||||| |||| ||||||    
T  25872 acagtgacccgaaggcac 25889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 116258 - 116359
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||| |||||||||| |||||||||||| ||||    
T  116258 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatgataataattcccttttatggtatgtttaa 116357  T
Q  179 cc 180  Q
    ||    
T  116358 cc 116359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 116202 - 116246
Alignment:
Q  20 aagggaaatgctaaccgatgcccccggggcactggttaaggatat 64  Q
    |||| |||||||||||| |||||||||||||| |||||| |||||    
T  116202 aaggaaaatgctaaccggtgcccccggggcacaggttaaagatat 116246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 179
Target Start/End: Original strand, 732 - 832
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||| |||||||  |||||||||||||||||    
T  732 ttatatagtagttaatccattgaaattgtgtaattaatttataataaagtcaaaaactgttttcttttatggtgataattctcttttatggtatgcttaa 831  T
Q  179 c 179  Q
    |    
T  832 c 832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 147037 - 146933
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||| |||||||||| | |||||||||||||||||    
T  147037 ttatatagtagttaatacattgaaattgtgtaattaattgataataaagtcaaaaacagttttctattacggtaataatttctttttatggtatgcttaa 146938  T
Q  179 ccagt 183  Q
     ||||    
T  146937 tcagt 146933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 17602 - 17494
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  17602 ttatatagtagctaatgcattgaaattgtg-aattaatttataataaagtcaaaaacagttttcttttatgataataattcctttttatggtatgtttaa 17504  T
Q  179 ccagtgtccc 188  Q
    || |||||||    
T  17503 ccggtgtccc 17494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 19717 - 19580
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||| |||  ||||||| |||| ||||    
T  19717 ttatataataattaatgcattgaaattgtgtaatgaatttataataaagtcaaaaacagtttccttttacgataatagttctcttttatgatatgattaa 19618  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataat 216  Q
     ||||||||||||  | || |||||||||| |||||||    
T  19617 tcagtgtcccggaaactccggttagcaggacccataat 19580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 69280 - 69384
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||  ||||| |||||||||| | |||||||||||||||||    
T  69280 ttatatagtagttaatacattaaaattatgtaattaatttataataaagtcaaaagcagtttttttttaaggtaataatttc-ttttatggtatgcttaa 69378  T
Q  179 ccagtg 184  Q
    ||||||    
T  69379 ccagtg 69384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 33813 - 33735
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||| |||||||||||||||||||||||||||||||||||| || || ||||| ||||| |||||||| ||||||||    
T  33813 ttatataatagttaatacattgaaattgtgtaattaatttataa-aagataaaaaatagttttcttttatgctaataatt 33735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 208
Target Start/End: Original strand, 233918 - 234036
Alignment:
Q  90 ttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaaccagtgtcccg 189  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| | |||||||||||| |||||| ||   |||    
T  233918 ttaattcattgaaattgtgtaattaatttataataaagtcaaaagcagtttccttttatgaaaataatttccttttatggtatgtttaaccggtactccg 234017  T
Q  190 gaggcaccagttagcagga 208  Q
    | |||||| ||||||||||    
T  234018 ggggcaccggttagcagga 234036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 346 - 483
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||||||  ||||||| |||| ||||    
T  346 ttatataatagttaatgcattgaaattgtgtaataaatttataataaagtcaaaaacagtttccttctacggtaataattctcttttatgatatgattaa 445  T
Q  179 ccagtgtcccggaggcaccagttagcaggatccataat 216  Q
     |||| ||| |||  | |  |||||||||| |||||||    
T  446 tcagtatcctggaaactctggttagcaggacccataat 483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 8029 - 7956
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  8029 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 7342 - 7415
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  7342 ttatatagtagttaatgcattgaaattgtgtaattaattgataataaagtcagaaacagtttccttttatggta 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 7406 - 7452
Alignment:
Q  162 ttttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||||||||||||| ||| |||||||| ||| ||||||||||    
T  7406 ttttatggtatgcttaacccgtgccccggaggtaccggttagcagga 7452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 95716 - 95616
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||| || |||||  ||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||||| ||||    
T  95716 ttatataataattaatgaattgaaattatgtaattaatttataataaagtcaaaa-cagttttcttttatggtaataattcccttttatggtatgtttaa 95618  T
Q  179 cc 180  Q
    ||    
T  95617 cc 95616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 50602 - 50725
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    ||||||||||||||||   |||||||||| |||||||||||||||||| |||||| || ||| |||||||| |||||||||  |||||| ||||| ||||    
T  50602 ttatatagtagttaatgttttgaaattgtataattaatttataataaagtcaaaatcaattttcttttatgataataattctcttttatagtatgtttaa 50701  T
Q  179 ccagtgtcccggaggcaccagtta 202  Q
    ||||||  |||| ||||| |||||    
T  50702 ccagtgctccgggggcactagtta 50725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 79 - 208
Target Start/End: Complemental strand, 53478 - 53360
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataattccattttatggtatgcttaa 178  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| ||           |||||||||  |||||||||||||||||    
T  53478 ttatatagtagttaatgcattgaaattgtataattaatttataataaagtcaaaaacaatt-----------taataattctcttttatggtatgcttaa 53390  T
Q  179 ccagtgtcccggaggcaccagttagcagga 208  Q
    | |||| |||||||||||| ||||||||||    
T  53389 ctagtgccccggaggcaccggttagcagga 53360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 11102 - 11029
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggta 152  Q
    ||||||| |||||||| ||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  11102 ttatatattagttaatgcattgaaattgtgtaattaaactataataaagtcaaaaacagtttcattttatggta 11029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 11040 - 10993
Alignment:
Q  160 cattttatggtatgcttaaccagtgtcccggaggcaccagttagcagga 208  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||||||||    
T  11040 cattttatggtatgcttaactggtg-cccgggggcaccagttagcagga 10993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 5093 - 5136
Alignment:
Q  79 ttatatagtagttaatacattgaaattgtgtaattaatttataa 122  Q
    ||||||||||||||||  ||||||||||||||||||||||||||    
T  5093 ttatatagtagttaatttattgaaattgtgtaattaatttataa 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 74585 - 74526
Alignment:
Q  99 tgaaattgtgtaattaatttataataaaatcaaaaacagtttccttttatggtaataatt 158  Q
    ||||||||| ||||||||| |||||||| | |||||||  || |||||||||||||||||    
T  74585 tgaaattgtataattaattgataataaattaaaaaacaaatttcttttatggtaataatt 74526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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