View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13955_low_61 (Length: 248)

Name: NF13955_low_61
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13955_low_61
NF13955_low_61
[»] chr2 (32 HSPs)
chr2 (2-241)||(19886483-19886722)
chr2 (1-241)||(11231161-11231404)
chr2 (1-241)||(22513008-22513251)
chr2 (1-241)||(28775630-28775873)
chr2 (1-241)||(24685604-24685847)
chr2 (117-241)||(24826522-24826646)
chr2 (1-190)||(12728582-12728772)
chr2 (1-190)||(16935783-16935973)
chr2 (1-190)||(17006443-17006633)
chr2 (1-148)||(23777963-23778111)
chr2 (1-190)||(34824665-34824855)
chr2 (1-190)||(42177845-42178035)
chr2 (1-153)||(3798516-3798669)
chr2 (10-190)||(8944045-8944226)
chr2 (1-148)||(12641560-12641708)
chr2 (1-190)||(12635744-12635934)
chr2 (45-190)||(23774370-23774516)
chr2 (45-148)||(5888548-5888652)
chr2 (1-102)||(21142085-21142187)
chr2 (1-59)||(25265406-25265464)
chr2 (1-44)||(24341420-24341463)
chr2 (1-59)||(8891431-8891489)
chr2 (1-59)||(19794720-19794778)
chr2 (1-59)||(20627329-20627387)
chr2 (117-190)||(25213372-25213446)
chr2 (1-43)||(43642989-43643031)
chr2 (3-59)||(462929-462985)
chr2 (3-59)||(36982457-36982513)
chr2 (1-59)||(7507860-7507918)
chr2 (1-59)||(14906456-14906514)
chr2 (1-59)||(19689417-19689475)
chr2 (1-59)||(23820260-23820318)
[»] chr5 (39 HSPs)
chr5 (2-241)||(12565-12804)
chr5 (2-241)||(21073417-21073656)
chr5 (2-241)||(18777814-18778053)
chr5 (2-241)||(19500090-19500328)
chr5 (1-241)||(4199807-4200047)
chr5 (2-241)||(22366302-22366542)
chr5 (1-241)||(29188107-29188346)
chr5 (2-241)||(25426819-25427058)
chr5 (1-241)||(43443220-43443457)
chr5 (1-215)||(27010031-27010244)
chr5 (1-241)||(10777793-10778036)
chr5 (1-241)||(21932204-21932447)
chr5 (1-241)||(21938374-21938617)
chr5 (1-241)||(35582226-35582469)
chr5 (1-241)||(22882907-22883150)
chr5 (1-241)||(36989593-36989836)
chr5 (12-215)||(7425525-7425729)
chr5 (1-191)||(11211940-11212131)
chr5 (1-190)||(35790974-35791164)
chr5 (1-241)||(17471411-17471654)
chr5 (1-190)||(23514751-23514941)
chr5 (1-190)||(1219396-1219586)
chr5 (45-190)||(23328791-23328937)
chr5 (45-190)||(24616395-24616541)
chr5 (45-190)||(24712771-24712917)
chr5 (45-190)||(24745789-24745935)
chr5 (117-241)||(11343008-11343134)
chr5 (117-241)||(16105967-16106093)
chr5 (1-59)||(34939466-34939524)
chr5 (1-59)||(18531083-18531141)
chr5 (1-43)||(23507154-23507196)
chr5 (1-59)||(25900422-25900480)
chr5 (1-44)||(27182578-27182621)
chr5 (1-59)||(20623158-20623216)
chr5 (1-59)||(21233544-21233602)
chr5 (1-59)||(22053849-22053907)
chr5 (1-59)||(37052933-37052991)
chr5 (1-59)||(16536386-16536444)
chr5 (1-59)||(32950884-32950942)
[»] chr4 (28 HSPs)
chr4 (1-241)||(10644409-10644648)
chr4 (2-190)||(47357845-47358030)
chr4 (1-241)||(18169160-18169403)
chr4 (12-215)||(15287096-15287300)
chr4 (45-215)||(22351915-22352086)
chr4 (12-215)||(15294205-15294409)
chr4 (1-153)||(17145570-17145723)
chr4 (1-148)||(18248408-18248556)
chr4 (1-190)||(7131941-7132131)
chr4 (1-190)||(20000913-20001103)
chr4 (1-148)||(19020676-19020824)
chr4 (45-190)||(26339253-26339399)
chr4 (37-139)||(8378377-8378480)
chr4 (1-110)||(22738459-22738568)
chr4 (117-215)||(14952085-14952183)
chr4 (74-148)||(9795490-9795564)
chr4 (1-59)||(15675105-15675163)
chr4 (1-44)||(10104281-10104324)
chr4 (1-44)||(31115818-31115861)
chr4 (1-43)||(54118276-54118318)
chr4 (3-44)||(122080-122121)
chr4 (2-59)||(33240890-33240947)
chr4 (1-44)||(13246619-13246662)
chr4 (1-59)||(10488751-10488809)
chr4 (116-190)||(14996444-14996518)
chr4 (1-59)||(16327942-16328000)
chr4 (1-59)||(26680389-26680447)
chr4 (115-148)||(8378491-8378524)
[»] chr7 (34 HSPs)
chr7 (1-241)||(13910846-13911086)
chr7 (1-241)||(16478785-16479024)
chr7 (1-241)||(10989599-10989841)
chr7 (1-241)||(2437647-2437889)
chr7 (4-215)||(13572869-13573079)
chr7 (1-241)||(7822918-7823161)
chr7 (1-241)||(7830229-7830472)
chr7 (1-241)||(27176623-27176866)
chr7 (1-241)||(27101460-27101703)
chr7 (1-241)||(27108808-27109051)
chr7 (1-241)||(38783552-38783795)
chr7 (1-215)||(18979872-18980087)
chr7 (1-215)||(15927758-15927973)
chr7 (1-241)||(15950613-15950857)
chr7 (10-190)||(15759990-15760171)
chr7 (1-148)||(18253761-18253909)
chr7 (1-190)||(13758560-13758750)
chr7 (1-153)||(14250811-14250964)
chr7 (66-148)||(15862174-15862257)
chr7 (45-148)||(16418731-16418835)
chr7 (1-148)||(48622584-48622732)
chr7 (45-148)||(10000288-10000392)
chr7 (1-59)||(13321205-13321263)
chr7 (1-59)||(47481047-47481105)
chr7 (1-59)||(13037030-13037088)
chr7 (3-59)||(16211957-16212013)
chr7 (1-59)||(11580755-11580813)
chr7 (117-191)||(15516719-15516793)
chr7 (1-59)||(11516416-11516474)
chr7 (1-59)||(15441580-15441638)
chr7 (1-59)||(30262145-30262203)
chr7 (1-44)||(36052853-36052896)
chr7 (1-59)||(7293205-7293263)
chr7 (3-59)||(3060157-3060213)
[»] chr6 (28 HSPs)
chr6 (2-241)||(27653805-27654044)
chr6 (1-241)||(16376196-16376439)
chr6 (1-241)||(16383520-16383763)
chr6 (2-215)||(25175754-25175968)
chr6 (1-241)||(10488889-10489132)
chr6 (1-241)||(22251389-22251632)
chr6 (1-241)||(22225561-22225804)
chr6 (1-241)||(14625952-14626192)
chr6 (1-230)||(16555973-16556205)
chr6 (1-230)||(16632529-16632761)
chr6 (1-215)||(16232082-16232297)
chr6 (41-241)||(19299467-19299670)
chr6 (3-137)||(16825678-16825812)
chr6 (1-148)||(1650022-1650167)
chr6 (1-215)||(18086674-18086889)
chr6 (45-215)||(29869627-29869798)
chr6 (1-190)||(1556195-1556385)
chr6 (12-190)||(19610219-19610398)
chr6 (1-190)||(23977959-23978149)
chr6 (132-241)||(16814820-16814930)
chr6 (1-148)||(13620712-13620860)
chr6 (1-144)||(29666063-29666208)
chr6 (1-59)||(15862660-15862718)
chr6 (1-59)||(1657764-1657822)
chr6 (1-59)||(35009455-35009513)
chr6 (1-59)||(23153636-23153694)
chr6 (1-59)||(27751614-27751672)
chr6 (117-190)||(4991396-4991470)
[»] chr8 (26 HSPs)
chr8 (1-241)||(24549171-24549410)
chr8 (1-241)||(21851786-21852027)
chr8 (1-241)||(21844393-21844634)
chr8 (1-241)||(30120912-30121153)
chr8 (1-241)||(6774082-6774320)
chr8 (1-241)||(271183-271426)
chr8 (1-241)||(644494-644737)
chr8 (1-241)||(830229-830472)
chr8 (1-241)||(15318982-15319225)
chr8 (1-241)||(15499351-15499594)
chr8 (1-241)||(22088617-22088860)
chr8 (1-212)||(16674245-16674454)
chr8 (1-190)||(22006134-22006324)
chr8 (1-190)||(13720804-13720994)
chr8 (1-190)||(16195421-16195611)
chr8 (1-190)||(13662141-13662331)
chr8 (1-153)||(16872964-16873117)
chr8 (1-59)||(17345758-17345816)
chr8 (1-59)||(16404991-16405049)
chr8 (1-59)||(16193732-16193790)
chr8 (1-59)||(24928807-24928865)
chr8 (1-59)||(5238276-5238334)
chr8 (1-59)||(22907230-22907288)
chr8 (1-59)||(24661264-24661322)
chr8 (1-59)||(43373484-43373542)
chr8 (1-59)||(43685735-43685793)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-241)||(36283-36523)
scaffold0023 (24-237)||(169736-169951)
scaffold0023 (1-190)||(153883-154073)
scaffold0023 (1-59)||(48787-48845)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-241)||(31497-31737)
scaffold0008 (3-44)||(128200-128241)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-241)||(43187-43427)
scaffold0076 (1-241)||(39293-39536)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-219)||(13171-13387)
[»] chr3 (30 HSPs)
chr3 (1-215)||(41270265-41270478)
chr3 (1-215)||(55316409-55316622)
chr3 (1-241)||(1467562-1467805)
chr3 (1-241)||(49232626-49232869)
chr3 (1-191)||(16821329-16821517)
chr3 (1-241)||(12264614-12264858)
chr3 (1-241)||(12812031-12812274)
chr3 (1-241)||(22275399-22275642)
chr3 (1-190)||(15468216-15468406)
chr3 (3-148)||(15615025-15615168)
chr3 (1-190)||(25058929-25059119)
chr3 (1-190)||(18896920-18897110)
chr3 (1-190)||(18911183-18911373)
chr3 (1-148)||(12902008-12902156)
chr3 (1-148)||(15936553-15936701)
chr3 (1-148)||(15938395-15938543)
chr3 (1-148)||(54651647-54651795)
chr3 (1-190)||(5228503-5228692)
chr3 (1-148)||(44229175-44229323)
chr3 (1-190)||(14842446-14842635)
chr3 (1-59)||(13839083-13839141)
chr3 (1-59)||(15859040-15859098)
chr3 (1-59)||(51158034-51158092)
chr3 (3-59)||(12030163-12030219)
chr3 (1-41)||(17912516-17912556)
chr3 (1-59)||(2449254-2449312)
chr3 (116-190)||(8268609-8268683)
chr3 (116-190)||(8275709-8275783)
chr3 (3-59)||(2050001-2050057)
chr3 (1-59)||(11986182-11986240)
[»] chr1 (23 HSPs)
chr1 (1-241)||(18059581-18059824)
chr1 (1-215)||(5072237-5072450)
chr1 (1-241)||(17004828-17005071)
chr1 (1-241)||(17148757-17149001)
chr1 (1-241)||(38054914-38055157)
chr1 (1-187)||(22227998-22228185)
chr1 (1-187)||(22232695-22232882)
chr1 (41-241)||(19962322-19962525)
chr1 (1-148)||(2116444-2116589)
chr1 (1-148)||(45051612-45051757)
chr1 (1-110)||(18601071-18601180)
chr1 (12-153)||(46523590-46523731)
chr1 (45-190)||(22035681-22035827)
chr1 (45-190)||(7640810-7640956)
chr1 (117-191)||(15861284-15861358)
chr1 (3-59)||(20913221-20913277)
chr1 (3-59)||(20931536-20931592)
chr1 (1-44)||(20893657-20893700)
chr1 (1-43)||(20445868-20445910)
chr1 (1-41)||(37844484-37844524)
chr1 (1-35)||(20531633-20531667)
chr1 (1-59)||(41394411-41394469)
chr1 (1-41)||(51452681-51452721)
[»] scaffold1711 (1 HSPs)
scaffold1711 (1-215)||(1153-1366)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-241)||(20936-21178)
scaffold0139 (1-241)||(13882-14123)
[»] scaffold0213 (2 HSPs)
scaffold0213 (37-206)||(29388-29558)
scaffold0213 (180-241)||(29565-29627)
[»] scaffold0107 (2 HSPs)
scaffold0107 (1-241)||(31499-31742)
scaffold0107 (10-100)||(39845-39935)
[»] scaffold0026 (2 HSPs)
scaffold0026 (16-215)||(64372-64570)
scaffold0026 (1-148)||(107936-108084)
[»] scaffold0215 (2 HSPs)
scaffold0215 (1-148)||(9266-9411)
scaffold0215 (1-148)||(16164-16309)
[»] scaffold0529 (1 HSPs)
scaffold0529 (1-190)||(3152-3341)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-190)||(225-411)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-190)||(5088-5278)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-190)||(3912-4102)
[»] scaffold0183 (1 HSPs)
scaffold0183 (45-215)||(6831-7002)
[»] scaffold0092 (1 HSPs)
scaffold0092 (37-190)||(10624-10778)
[»] scaffold0191 (1 HSPs)
scaffold0191 (1-241)||(7278-7522)
[»] scaffold1500 (1 HSPs)
scaffold1500 (1-190)||(1390-1580)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-190)||(1451-1641)
[»] scaffold0155 (1 HSPs)
scaffold0155 (47-215)||(23600-23769)
[»] scaffold0383 (1 HSPs)
scaffold0383 (12-241)||(2593-2826)
[»] scaffold0028 (2 HSPs)
scaffold0028 (117-241)||(130880-131006)
scaffold0028 (1-59)||(89470-89528)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-148)||(45220-45369)
scaffold0066 (1-148)||(54606-54755)
[»] scaffold0467 (1 HSPs)
scaffold0467 (1-148)||(10257-10405)
[»] scaffold0003 (1 HSPs)
scaffold0003 (45-148)||(7443-7547)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-148)||(54064-54212)
[»] scaffold0516 (1 HSPs)
scaffold0516 (45-148)||(12045-12149)
[»] scaffold0892 (1 HSPs)
scaffold0892 (1-110)||(3603-3712)
[»] scaffold0012 (2 HSPs)
scaffold0012 (1-148)||(34076-34224)
scaffold0012 (1-59)||(247458-247516)
[»] scaffold0013 (1 HSPs)
scaffold0013 (124-215)||(154282-154373)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-59)||(41837-41895)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-59)||(34476-34534)
scaffold0075 (75-148)||(34374-34450)
[»] scaffold0032 (1 HSPs)
scaffold0032 (74-148)||(13268-13342)
[»] scaffold0367 (1 HSPs)
scaffold0367 (117-241)||(17115-17241)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-59)||(12302-12360)
[»] scaffold0162 (2 HSPs)
scaffold0162 (1-59)||(8196-8254)
scaffold0162 (3-59)||(26431-26487)
[»] scaffold0132 (3 HSPs)
scaffold0132 (1-59)||(13695-13753)
scaffold0132 (75-148)||(13779-13855)
scaffold0132 (117-149)||(42677-42709)
[»] scaffold1542 (1 HSPs)
scaffold1542 (1-59)||(550-608)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-59)||(6080-6138)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-59)||(3379-3437)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-59)||(3598-3656)
scaffold0266 (1-59)||(1313-1371)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-59)||(972-1030)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-59)||(9038-9096)
scaffold0025 (3-44)||(148912-148953)
[»] scaffold0195 (2 HSPs)
scaffold0195 (3-59)||(19397-19453)
scaffold0195 (3-59)||(21481-21537)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-59)||(36929-36985)
[»] scaffold0106 (1 HSPs)
scaffold0106 (4-59)||(41921-41976)
[»] scaffold0772 (1 HSPs)
scaffold0772 (1-59)||(5718-5776)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-59)||(48376-48434)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-43)||(123196-123238)
[»] scaffold0498 (1 HSPs)
scaffold0498 (3-43)||(9069-9109)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-59)||(51198-51254)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-44)||(172094-172137)
scaffold0001 (1-44)||(177797-177840)
[»] scaffold0141 (2 HSPs)
scaffold0141 (1-59)||(22729-22787)
scaffold0141 (1-59)||(26984-27042)
[»] scaffold0124 (1 HSPs)
scaffold0124 (1-59)||(1598-1656)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-59)||(56115-56173)
[»] scaffold0078 (1 HSPs)
scaffold0078 (1-59)||(37082-37140)
[»] scaffold0123 (1 HSPs)
scaffold0123 (5-59)||(8202-8257)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-44)||(272214-272257)
[»] scaffold0389 (1 HSPs)
scaffold0389 (5-58)||(10854-10908)
[»] scaffold0218 (1 HSPs)
scaffold0218 (3-44)||(5092-5133)


Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 19886722 - 19886483
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  19886722 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 19886623  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19886622 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccact 19886523  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19886522 tgattcctaaagcttcccttcaaccctcttgttcttctct 19886483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 11231404 - 11231161
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  11231404 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 11231305  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  11231304 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 11231205  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  11231204 aattgattccccaagctttcccttcaacactcttgttcttctct 11231161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22513251 - 22513008
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  22513251 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 22513152  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  22513151 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 22513052  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  22513051 aattgattccccaagctttcccttcaacactcttgttcttctct 22513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 28775873 - 28775630
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  28775873 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 28775774  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  28775773 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 28775674  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  28775673 aattgattccccaagctttcccttcaacactcttgttcttctct 28775630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 24685847 - 24685604
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  24685847 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 24685748  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  24685747 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 24685648  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| || ||||||||||||    
T  24685647 aattgattccccaagctttcccttcaacacttttgttcttctct 24685604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 24826646 - 24826522
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagctt 216  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24826646 atgattatgatgatgactaacccctttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttgattcctaaagctt 24826547  T
Q  217 cccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||| ||||||||    
T  24826546 cccttcaaccctcttgctcttctct 24826522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 12728582 - 12728772
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  12728582 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 12728681  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  12728682 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 12728772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16935783 - 16935973
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||||    
T  16935783 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 16935882  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  ||  |||||||||||||||||    
T  16935883 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctccta 16935973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 17006443 - 17006633
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||||    
T  17006443 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 17006542  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  ||  |||||||||||||||||    
T  17006543 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctccta 17006633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 23778111 - 23777963
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || ||||||||||||||||||  || ||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  23778111 cataccataatcatcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 23778012  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  ||||||||||||| |||||||||||| |||||||    
T  23778011 aaatgcaaaaattgaacatgattatgatgataactaacccctttacctt 23777963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 34824665 - 34824855
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  34824665 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 34824764  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  34824765 aaatgcaaaaattgtacatgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 34824855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 42178035 - 42177845
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  42178035 cataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 42177936  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||| ||  || ||||||||||||| ||||    
T  42177935 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagccccta 42177845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 3798669 - 3798516
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  3798669 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 3798570  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaag 153  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||    
T  3798569 aaatgcaaaaattatacatgattatgataataactaacccccttaccttagaag 3798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 190
Target Start/End: Original strand, 8944045 - 8944226
Alignment:
Q  10 atcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aa 108  Q
    |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  8944045 atcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 8944144  T
Q  109 aattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  8944145 aattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 8944226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12641708 - 12641560
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  12641708 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 12641609  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  12641608 aaatgcaaaaattgtacatgattatgataataactaacccccttacctt 12641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 12635934 - 12635744
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||| ||||||||||||||||||     
T  12635934 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaacatgagg 12635835  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  12635834 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 12635744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 23774370 - 23774516
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa-ttacacatgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||  || ||||||||||||||||||||||||||    
T  23774370 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaacttgattatgataataactaaccccctt 23774469  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  23774470 accttagaagaagattaacccaaactcttgcttcaatttagctccta 23774516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 5888652 - 5888548
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| | ||| |||||||||    
T  5888652 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 5888553  T
Q  144 acctt 148  Q
    |||||    
T  5888552 acctt 5888548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 21142085 - 21142187
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgag 99  Q
    ||||| || ||| |||||||||||| |  || ||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  21142085 cataccataatcctcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgag 21142184  T
Q  100 aaa 102  Q
    |||    
T  21142185 aaa 21142187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25265464 - 25265406
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  25265464 catacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaattt 25265406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24341463 - 24341420
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  24341463 catacaattatcatcaattcatgcatacaaacatatcatcacag 24341420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8891431 - 8891489
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||    
T  8891431 catacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaattt 8891489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19794778 - 19794720
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||   ||||||||||||    
T  19794778 catacaattattatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 19794720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20627387 - 20627329
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||| |||||||||||||| ||||||||   ||||||||||||    
T  20627387 catacaattatcatcaattcgtgcatacaaacatatcatcacagttggagcacgaattt 20627329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 25213372 - 25213446
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgatta-tccttaatcctagcttcaattcagctccta 190  Q
    |||||||||||||  |||||||||||||||||||||| |||||| |||| ||  || ||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctccta 25213446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43643031 - 43642989
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  43643031 catacaattatcatcaattcatgcatacaaacatatcatcaca 43642989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 462929 - 462985
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||    
T  462929 tacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaattt 462985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36982513 - 36982457
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||| ||||||||||| ||||||||   ||||||||||||    
T  36982513 tacaattatcatcaattcatgaatacaaacatatcatcacagttggagcacgaattt 36982457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7507918 - 7507860
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||| |  || ||| ||||||| |||||||||||||||    
T  7507918 catacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaattt 7507860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14906514 - 14906456
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  14906514 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 14906456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19689475 - 19689417
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  19689475 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 19689417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23820260 - 23820318
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  23820260 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 23820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 12565 - 12804
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  12565 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 12664  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12665 aatacaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctaacttcaattcagctcctaggtcacccact 12764  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  12765 tgattcctaaagcttcccttcaaccctcttgttcttctct 12804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 21073656 - 21073417
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  21073656 atacaactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaacatgagaa 21073557  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21073556 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 21073457  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21073456 tgattcctaaagcttcccttcaaccctcttgttcttctct 21073417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 18778053 - 18777814
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18778053 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaacatgagaa 18777954  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||| |||||||||||||||||||||||||||||    
T  18777953 aatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttaattatctctaacccttgcttcaattcagctcctaggtcacccact 18777854  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  18777853 tgattcctcaagcttcccttcaaccctcttgttcttctct 18777814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 19500090 - 19500328
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||    
T  19500090 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaacatgagaa 19500189  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||| ||||||||||    
T  19500190 aatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccact 19500288  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||| ||||||||||||||| |||||||||||||||    
T  19500289 tgattcctcaagcttcccttcaactctcttgttcttctct 19500328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 4200047 - 4199807
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||    
T  4200047 catacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatacaacatgaga 4199948  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  4199947 atatgcaaaattacacatgattatgataatccctaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccac 4199848  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  4199847 ttgattcctaaagcttcccttcaaccctcttgctcttctct 4199807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 22366542 - 22366302
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  22366542 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaacatgagaa 22366443  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccac 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| ||||||||||| ||||||||||| |||||    
T  22366442 aatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcaactcctaggtcaccccac 22366343  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  22366342 ttgattgctaaagcttcccttcaaccctcttgctcttctct 22366302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 29188346 - 29188107
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||||||| |||||||||||||||||||||||    
T  29188346 catacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcgacccattttcatacaacatgaga 29188247  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccca 199  Q
    ||||||||||||  |||||||||| ||||| |||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||| ||||    
T  29188246 aaatgcaaaatt--acatgattataataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccca 29188149  T
Q  200 cttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  29188148 cttgattcctaaagcttcccttcaaccctcttgctcttctct 29188107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 25426819 - 25427058
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25426819 atacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaa 25426918  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatc-cttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |  ||| |||||||||||||||||| || ||||||    
T  25426919 aatgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaaccccttgcttcaattcagctccta-gttacccac 25427017  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||| | |||||||||||||||||||||| ||||||||    
T  25427018 ttgattctttaagcttcccttcaaccctcttgctcttctct 25427058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 43443457 - 43443220
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  43443457 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaatccattttcatataacatgaga 43443358  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  43443357 atatgc--aattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccac 43443260  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||| ||||||||||||||||||| || ||||||||    
T  43443259 ttgattcct-aagcttcccttcaaccctcatgctcttctct 43443220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 27010031 - 27010244
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27010031 catacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagc 27010130  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| |||||||||    
T  27010131 aaatgcaaaaat-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccac 27010229  T
Q  201 ttgattcctaaagct 215  Q
    |||||||||||||||    
T  27010230 ttgattcctaaagct 27010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 10778036 - 10777793
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  10778036 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 10777937  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||||| ||||||  |||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||| |||    
T  10777936 aaatgcaaaaattgtacatgattatgataatcactaccccccttacctttgaagatgattatccttaacccttgcttcaattcagctcctaggtcacccc 10777837  T
Q  199 acttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||    
T  10777836 acttgattcctcaagcttccccttcaactctcttgttcttctct 10777793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 21932447 - 21932204
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  21932447 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 21932348  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  21932347 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 21932248  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  21932247 aattgattcctcaagctttcccttcaacactcttgttcttctct 21932204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 21938617 - 21938374
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  21938617 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 21938518  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  21938517 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 21938418  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  21938417 aattgattcctcaagctttcccttcaacactcttgttcttctct 21938374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 35582226 - 35582469
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  35582226 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 35582325  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  35582326 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 35582425  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  35582426 aattgattccccaagctttcccttcaacactcttgttcttctct 35582469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22883150 - 22882907
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||| ||||| |||  ||||||||| |||||||||||||||||||||||||    
T  22883150 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaacatgaga 22883051  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||     
T  22883050 aaatgcaaagattgtacatgattatgataataactaacccccttatctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcaccca 22882951  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | |||||| |  |||| ||||||||||| |||||||||||||||    
T  22882950 aattgatttcccaagctttcccttcaacactcttgttcttctct 22882907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 36989836 - 36989593
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||| ||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  36989836 cataccataatcatcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 36989737  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    || |||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  36989736 aattgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 36989637  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  36989636 aattgattccccaagctttcccttcaacactcttgttcttctct 36989593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 12 - 215
Target Start/End: Original strand, 7425525 - 7425729
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaa 110  Q
    |||| ||||||||| |  || |||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  7425525 catcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 7425624  T
Q  111 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattccta 210  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| |||||||||||||||||||    
T  7425625 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 7425724  T
Q  211 aagct 215  Q
    |||||    
T  7425725 aagct 7425729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11212131 - 11211940
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  11212131 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 11212032  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctag 191  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || |||||||||||||||||||    
T  11212031 aaatgcaaaaattgaacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctag 11211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 35791164 - 35790974
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || |||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  35791164 cataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 35791065  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  35791064 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 35790974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 17471654 - 17471411
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  17471654 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgaga 17471555  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||| ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||| |   ||  || ||||||||||||||||||| | | |||    
T  17471554 aaatacaaaatttgtacatgattatgataataactaacccccttacctttgaagatgattaactcaaactcttgcttcaattcagctcctagcttacccc 17471455  T
Q  199 acttgattcctaaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| ||||  ||||||||||  | |||||||||||||    
T  17471454 aattgattcctcaagctattcccttcaaatc-cttgttcttctct 17471411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 23514751 - 23514941
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  23514751 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 23514850  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  23514851 aaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 23514941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1219586 - 1219396
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||| ||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  1219586 cataccataatcatcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 1219487  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  1219486 aaatgcaaaaattgtacatgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 1219396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 23328791 - 23328937
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  23328791 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 23328890  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  23328891 accttagaagaagattaacccaaactcttgcttcaatttagctccta 23328937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 24616395 - 24616541
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  24616395 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24616494  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  24616495 accttagaagaagattaacccaaactcttgcttcaatttagctccta 24616541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 24712771 - 24712917
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  24712771 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24712870  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  24712871 accttagaagaagattaacccaaactcttgcttcaatttagctccta 24712917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 24745789 - 24745935
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  24745789 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24745888  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  24745889 accttagaagaagattaacccaaactcttgcttcaatttagctccta 24745935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 11343008 - 11343134
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagc- 214  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| || ||| |   ||||||||||||||||||||||| |||||||||||||| ||||     
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctcctaggtcaccccacttgattcctcaagct 11343107  T
Q  215 ttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||| |||||||||||||||    
T  11343108 ttcccttcaacactcttgttcttctct 11343134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 16105967 - 16106093
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagc- 214  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||| ||| ||  || ||||||||||||||||||| | | |||| ||||||||| ||||     
T  16105967 atgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctcctagcttaccccaattgattcctcaagct 16106066  T
Q  215 ttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||| |||||||||||||||    
T  16106067 ttcccttcaacactcttgttcttctct 16106093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34939466 - 34939524
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  34939466 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 34939524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 18531141 - 18531083
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  18531141 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 18531083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23507154 - 23507196
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  23507154 catacaattatcatcaattcatgcatacaaacatatcatcaca 23507196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25900480 - 25900422
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  25900480 catacaattatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 25900422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27182621 - 27182578
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||||||||||||||| |||||||||||||||||| ||||||||    
T  27182621 catacaattatcatcagttcatgcatacaaacatatcatcacag 27182578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 20623158 - 20623216
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  20623158 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 20623216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21233602 - 21233544
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  21233602 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 21233544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22053907 - 22053849
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||   ||||||||||||    
T  22053907 catacaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaattt 22053849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37052933 - 37052991
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  37052933 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 37052991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 16536386 - 16536444
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| || |||||||||||||||||||| ||||| ||   ||||||||||||    
T  16536386 catacaattattataaattcatgcatacaaacatatcatcaaagttggagcacgaattt 16536444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32950884 - 32950942
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||| |||| || || || ||||||||||||  |||||||||||||    
T  32950884 catacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaattt 32950942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10644409 - 10644648
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10644409 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagc 10644508  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  10644509 aaatgcaaaatt--acatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctaacttcacttcagctcctagatcacccac 10644606  T
Q  201 ttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    ||||||||| |||||| |||| |||| |||||||||||||||    
T  10644607 ttgattcctcaagcttcccctccaacactcttgttcttctct 10644648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 190
Target Start/End: Original strand, 47357845 - 47358030
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |    
T  47357845 atacaactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagga 47357944  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||||||||  |||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  47357945 aatgcaaaatt--acatgattgtgataataactaacccccttaccttagaagaagattaacc-caactcttgcttcaattcagctccta 47358030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 18169160 - 18169403
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  18169160 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 18169259  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||| ||||||  ||||| || |||| || ||||||||||||||||||| | | |||    
T  18169260 aaatgcaaaaattgtacatgattatgataataactaacccccttacc-ttgaagaagattaaccctaattcttgcttcaattcagctcctagcttacccc 18169358  T
Q  199 acttgattcctaaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| ||||  ||| ||||||  | |||||||||||||    
T  18169359 aattgattcctcaagctattctcttcaaaacccttgttcttctct 18169403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 15287300 - 15287096
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| |||||||||||||||||||||||  |   |||||||||||| |||||||||||||||||||||||||||| ||||    
T  15287300 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15287201  T
Q  111 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattccta 210  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| |||||||||||||||||||    
T  15287200 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 15287101  T
Q  211 aagct 215  Q
    |||||    
T  15287100 aagct 15287096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 22352086 - 22351915
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||||||||||||||||    
T  22352086 caagagcatgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22351987  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||||||||||||||||||    
T  22351986 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 22351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 15294409 - 15294205
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| |||||||||||||||||||||||  |   |||||||||||| |||||||||||||||||||||||||||| ||||    
T  15294409 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15294310  T
Q  111 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattccta 210  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||||| |||||||    
T  15294309 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttcattccta 15294210  T
Q  211 aagct 215  Q
    |||||    
T  15294209 aagct 15294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 17145723 - 17145570
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||| | |  || ||| |||||||| |||||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  17145723 cataccataatcatcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatacaacatgaga 17145624  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaag 153  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||    
T  17145623 aaatgcaaaaattgaacatgattatgataataactaacccccttaccttagaag 17145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 18248408 - 18248556
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || ||| |||||||||||| |  || ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  18248408 cataccataatcctcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaacatgaga 18248507  T
Q  101 aaatg-caaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||  ||||||  ||| ||||||||||||||||||||||||||||||    
T  18248508 aaatgtaaaaattgtacaagattatgataataactaacccccttacctt 18248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 7132131 - 7131941
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||| |||||||||    
T  7132131 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataacatgaga 7132032  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  |||||  |  ||  || ||||||||||||||||||    
T  7132031 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaatccaaactcttgcttcaattcagctccta 7131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 20000913 - 20001103
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  20000913 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 20001012  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  20001013 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 20001103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19020676 - 19020824
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| |    
T  19020676 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaca 19020775  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  |||||||||||||  |||||||||||||||||||    
T  19020776 aaatgcaaaaattgaacatgattatgatggtaactaacccccttacctt 19020824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 26339253 - 26339399
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  26339253 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 26339352  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  26339353 accttagaagaagattaacccaaactcttgcttcaatttagctccta 26339399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 8378377 - 8378480
Alignment:
Q  37 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatg-caaaattacacatgattatgataataacta 135  Q
    |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||    
T  8378377 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacatgattatgataataacta 8378476  T
Q  136 accc 139  Q
    ||||    
T  8378477 accc 8378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22738459 - 22738568
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||||||||| ||||||||| |||| |||||||| ||| ||||||||||||||||||||||    
T  22738459 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaacatgaga 22738558  T
Q  101 aaatgcaaaa 110  Q
    ||||||||||    
T  22738559 aaatgcaaaa 22738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 215
Target Start/End: Original strand, 14952085 - 14952183
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 14952183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 9795490 - 9795564
Alignment:
Q  74 atcaacccattttcatacaacatgagaaaatgcaaaa-ttacacatgattatgataataactaacccccttacctt 148  Q
    |||||||||||| ||||||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||||||||    
T  9795490 atcaacccattt-catacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttacctt 9795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15675163 - 15675105
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  15675163 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 15675105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10104324 - 10104281
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  10104324 catacaattatcatcaattcatgcatacaaacatatcatcacag 10104281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31115818 - 31115861
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  31115818 catacaattatcatcaattcatgcatacaaacatatcatcacag 31115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54118318 - 54118276
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  54118318 catacaattatcatcaattcatgcatacaaacatatcatcaca 54118276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 122080 - 122121
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  122080 tacaattatcatcaattcatgcatacaaacatatcatcacag 122121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 33240890 - 33240947
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||| |||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 33240947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13246619 - 13246662
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||||||||||||| |||||||||||||||||||| ||||||||    
T  13246619 catacaattatcattaattcatgcatacaaacatatcatcacag 13246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 10488751 - 10488809
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  10488751 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 10488809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 14996444 - 14996518
Alignment:
Q  116 catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||||||||||||||||||||||||||||||  |||  ||||| ||  ||  || ||||||||||||||||||    
T  14996444 catgattatgataataactaacccccttaccttaaaagaagattaacccaaactcttgcttcaattcagctccta 14996518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16328000 - 16327942
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  16328000 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 16327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26680389 - 26680447
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  26680389 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 26680447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 8378491 - 8378524
Alignment:
Q  115 acatgattatgataataactaacccccttacctt 148  Q
    |||||||||||||||||||||| |||||||||||    
T  8378491 acatgattatgataataactaatccccttacctt 8378524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 13911086 - 13910846
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  13911086 catacaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgaga 13910987  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  13910986 atatgcaaaattacacatgattatgataatcaataacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccac 13910887  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  13910886 ttgattcctaaagcttcccttcaaccctcttgctcttctct 13910846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16479024 - 16478785
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  16479024 catacaattatcatcaattcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaacccattttcatacaacatgaga 16478925  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||||||||||  | |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  16478924 aaatgcaaaatt--aaatgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagctcctaggtcacccac 16478827  T
Q  201 ttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    ||||||||| |||||| |||| |||| |||||||||||||||    
T  16478826 ttgattcctcaagcttcccctccaacactcttgttcttctct 16478785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10989599 - 10989841
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  10989599 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaacccattttcatacaacatgaga 10989698  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacc-ca 199  Q
    | ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||| ||||||||| |||||||| |||||| ||    
T  10989699 atatgcaaaattatacatgattatgataatcactaacccccatacctttgaagttgattatccctaacccttgcttcaattaagctcctatgtcacctca 10989798  T
Q  200 cttgattcctaaagcttcccttc-aaccctcttgttcttctct 241  Q
    |||||||||| ||||| |||||| ||| |||||| ||||||||    
T  10989799 cttgattcctcaagctccccttctaacactcttgatcttctct 10989841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 2437647 - 2437889
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||  || ||||||||||| | ||||||||||||||||||||||    
T  2437647 catacaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattatcccattttcatacaacatgaga 2437746  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccca 199  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||| ||||    
T  2437747 aaatgcaaaattgtacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccca 2437846  T
Q  200 cttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
     ||||||||| |||| ||||||||||| ||| |||||||||||    
T  2437847 attgattcctcaagctttcccttcaacactcctgttcttctct 2437889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 13572869 - 13573079
Alignment:
Q  4 acaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaa 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  13572869 acaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaa 13572968  T
Q  104 tgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttg 203  Q
    ||||||| |  |||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||||||    
T  13572969 tgcaaaaat-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttg 13573067  T
Q  204 attcctaaagct 215  Q
    ||||||||||||    
T  13573068 attcctaaagct 13573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7822918 - 7823161
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  7822918 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 7823017  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  7823018 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 7823117  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  7823118 aattgattcctcaagctttcccttcaacactcttgttcttctct 7823161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 7830229 - 7830472
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  7830229 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 7830328  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  7830329 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 7830428  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  7830429 aattgattcctcaagctttcccttcaacactcttgttcttctct 7830472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 27176623 - 27176866
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  27176623 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 27176722  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  27176723 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 27176822  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  27176823 aattgattcctcaagctttcccttcaacactcttgttcttctct 27176866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 27101703 - 27101460
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  27101703 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 27101604  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  27101603 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 27101504  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  27101503 aattgattccccaagctttcccttcaacactcttgttcttctct 27101460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 27109051 - 27108808
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  27109051 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 27108952  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  27108951 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 27108852  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  27108851 aattgattccccaagctttcccttcaacactcttgttcttctct 27108808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38783795 - 38783552
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  38783795 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 38783696  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  38783695 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 38783596  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  38783595 aattgattccccaagctttcccttcaacactcttgttcttctct 38783552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18980087 - 18979872
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  18980087 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 18979988  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||    
T  18979987 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcaccca 18979888  T
Q  200 cttgattcctaaagct 215  Q
    ||||||||||||||||    
T  18979887 cttgattcctaaagct 18979872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15927758 - 15927973
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  ||||| ||||||| |||||||||||||||||||||    
T  15927758 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaacatgaga 15927857  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||    
T  15927858 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcaccca 15927957  T
Q  200 cttgattcctaaagct 215  Q
    ||||||||||||||||    
T  15927958 cttgattcctaaagct 15927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 15950857 - 15950613
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  15950857 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 15950758  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||||||||  ||||| ||  ||  || ||||||||||||||||||| | | |||    
T  15950757 aaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagaagattaacccaaactcttgcttcaattcagctcctagcttacccc 15950658  T
Q  199 acttgattcctaaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| ||||  || |||||||  | |||||||||||||    
T  15950657 aattgattcctcaagctatttccttcaaaacccttgttcttctct 15950613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 15760171 - 15759990
Alignment:
Q  10 atcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aa 108  Q
    |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  15760171 atcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaa 15760072  T
Q  109 aattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||  ||||||||||||| |||||||||||||||||||| ||||  ||||| |   ||  || ||||||||||||||||||    
T  15760071 aattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactcttgcttcaattcagctccta 15759990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 18253909 - 18253761
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||||    
T  18253909 catacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgaga 18253810  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  |||||||||| || ||||||||||||||||||||    
T  18253809 aaatgcaaaaattgaacatgattataatgataactaacccccttacctt 18253761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 13758560 - 13758750
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  13758560 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 13758659  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  13758660 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 13758750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 14250964 - 14250811
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||| ||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  14250964 cataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 14250865  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaag 153  Q
    |||||| |||| |  ||||||||| ||| |||||||||||||||||||| ||||    
T  14250864 aaatgcaaaaaatgaacatgattacgatgataactaacccccttaccttagaag 14250811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 15862174 - 15862257
Alignment:
Q  66 aattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttacctt 15862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 16418731 - 16418835
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| | ||| |||||||||    
T  16418731 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 16418830  T
Q  144 acctt 148  Q
    |||||    
T  16418831 acctt 16418835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 48622732 - 48622584
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||| ||||||||||||||  ||| |||||||||||||||||||||| || |||||||||    
T  48622732 cataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaacatgaga 48622633  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctt 148  Q
    |||||||||| ||  |  |||||||||| | ||| ||||||||||||||    
T  48622632 aaatgcaaaaatttgaattgattatgatgaaaacaaacccccttacctt 48622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 10000392 - 10000288
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  | | |||||||||| |  || |||||||||    
T  10000392 caagagcacgaatttgacataaattgttcatcaacccatttttatacaacatgagaagatgcaaaatttgaaattgattatgatgaagacaaaccccctt 10000293  T
Q  144 acctt 148  Q
    |||||    
T  10000292 acctt 10000288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13321205 - 13321263
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  13321205 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 13321263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47481105 - 47481047
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  47481105 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 47481047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13037088 - 13037030
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  13037088 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 13037030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 16211957 - 16212013
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  16211957 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 16212013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11580813 - 11580755
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||    
T  11580813 catacaattatcatcaattcatgcatacaaacatattatcacagttggagcacgaattt 11580755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 15516793 - 15516719
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctag 191  Q
    |||||||||||||  |||||||||||||| ||||||| |||||| || |||  || |||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctcctag 15516719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 11516416 - 11516474
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  11516416 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 11516474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15441638 - 15441580
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  15441638 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 15441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30262203 - 30262145
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  30262203 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 30262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36052853 - 36052896
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||| ||||||||||||||||||||||||||| || ||||||||    
T  36052853 catataattatcatcaattcatgcatacaaacgtatcatcacag 36052896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7293205 - 7293263
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| || |||||||||||||||||||| ||||| ||   ||||||||||||    
T  7293205 catacaattattattaattcatgcatacaaacatatcatcaaagttggagcacgaattt 7293263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 3060157 - 3060213
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||| ||||||||||| |||  |||||||   ||||||||||||    
T  3060157 tacaattatcatcaattaatgcatacaaatatattatcacagttggagcacgaattt 3060213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 27654044 - 27653805
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaa 101  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||    
T  27654044 atacaactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaacatgagaa 27653945  T
Q  102 aatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccact 201  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||||    
T  27653944 aatgcaaaattacacatgattatgataatcactaaccccctcacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccact 27653845  T
Q  202 tgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  27653844 tgattcctaaagcttcccttcaaccctcttgctcttctct 27653805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16376439 - 16376196
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  16376439 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 16376340  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  16376339 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 16376240  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  16376239 aattgattcctcaagctttcccttcaacactcttgttcttctct 16376196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 16383763 - 16383520
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  16383763 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 16383664  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  16383663 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 16383564  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  16383563 aattgattcctcaagctttcccttcaacactcttgttcttctct 16383520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 25175754 - 25175968
Alignment:
Q  2 atacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgag-a 100  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |    
T  25175754 atacaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaa 25175853  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatc-cttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| || |  ||| |||||||||||||||||| ||||||||    
T  25175854 aaatgcaaaattatacatgattatggtaatcactaacccccttacctttgaagttgattatctctaaccccttgcttcaattcagctccta-gtcaccca 25175952  T
Q  200 cttgattcctaaagct 215  Q
    ||||||||| ||||||    
T  25175953 cttgattccgaaagct 25175968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10488889 - 10489132
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  10488889 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 10488988  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  10488989 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 10489088  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  10489089 aattgattccccaagctttcccttcaacactcttgttcttctct 10489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22251632 - 22251389
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  22251632 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 22251533  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||     
T  22251532 aaatgcaaagattgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccca 22251433  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| |||| |||||| |||||||||||||||    
T  22251432 aattgattcctcaagctttccattcaacactcttgttcttctct 22251389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22225804 - 22225561
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  22225804 cataccataatcatcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 22225705  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||     
T  22225704 aaatgcaaagattgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccca 22225605  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| |||| |||||| |||||||||||||||    
T  22225604 aattgattcctcaagctttccattcaacactcttgttcttctct 22225561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 14626192 - 14625952
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacat--ga 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||| | ||| | | || || || |||||||  ||    
T  14626192 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaatt-caaacaacatttga 14626094  T
Q  99 gaaaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc 198  Q
    |||  || ||| | | | |||||| |||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||    
T  14626093 gaatttgtaaagtga-agatgattgtgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccc 14625995  T
Q  199 acttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  14625994 acttgattcctcaagcttcccttcaaccctcttgttcttctct 14625952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16556205 - 16555973
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| |||||||||| |||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  16556205 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 16556106  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  16556105 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 16556006  T
Q  199 acttgattcctaaagc-ttcccttcaaccctct 230  Q
    | ||||||||  |||| ||||||||||| ||||    
T  16556005 aattgattccccaagctttcccttcaacactct 16555973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 16632761 - 16632529
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| |||||||||| |||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  16632761 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 16632662  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  16632661 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 16632562  T
Q  199 acttgattcctaaagc-ttcccttcaaccctct 230  Q
    | ||||||||  |||| ||||||||||| ||||    
T  16632561 aattgattccccaagctttcccttcaacactct 16632529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16232082 - 16232297
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  16232082 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 16232181  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||    
T  16232182 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcaccca 16232281  T
Q  200 cttgattcctaaagct 215  Q
    ||||||||||||||||    
T  16232282 cttgattcctaaagct 16232297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 41 - 241
Target Start/End: Original strand, 19299467 - 19299670
Alignment:
Q  41 acagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa-attacacatgattatgataataactaaccc 139  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  19299467 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19299566  T
Q  140 ccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgttctt 237  Q
    |||||||||||||||||||||||  ||| ||| |||||||||||||||||||||| ||| | |||| |||  |||| ||||||||||| |||||||||||    
T  19299567 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgcccaaattgaatccccaagctttcccttcaacactcttgttctt 19299666  T
Q  238 ctct 241  Q
    ||||    
T  19299667 ctct 19299670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 16825812 - 16825678
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaa 102  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16825812 tacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaa 16825713  T
Q  103 atgcaaaattacacatgattatgataataactaac 137  Q
    |||||||||||||||||||||||||||| ||||||    
T  16825712 atgcaaaattacacatgattatgataatcactaac 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 1650167 - 1650022
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  1650167 catacaattatcatcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgaga 1650068  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||||  |||||||||||||||  |||||||||||||||||    
T  1650067 aaatgcaaaatt--acatgattatgataaagactaacccccttacctt 1650022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18086889 - 18086674
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  18086889 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 18086790  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    |||||| ||||||  ||||||||||  |||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||    
T  18086789 aaatgcaaaaattgtacatgattatactaataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcaccca 18086690  T
Q  200 cttgattcctaaagct 215  Q
    ||||||| ||||||||    
T  18086689 cttgatttctaaagct 18086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 29869798 - 29869627
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||||||||||||||||    
T  29869798 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaattttaaattgattatgataataactaaccccctt 29869699  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||||| ||||  ||| | ||  ||  || |||||||||||||||||| ||||||||||||||||||||||||    
T  29869698 accttagaagaagatcaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 29869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 1556195 - 1556385
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  1556195 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 1556294  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||||| ||||  ||||| |   ||  || ||||||||||||||||||    
T  1556295 aaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactcttgcttcaattcagctccta 1556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 19610219 - 19610398
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaa 110  Q
    |||| ||||||||| |  || ||| |||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  19610219 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatcagaaaatgcaaaaa 19610318  T
Q  111 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  19610319 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 19610398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 23977959 - 23978149
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  23977959 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 23978058  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  ||||||||||||||||||||||| |||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  23978059 aaatgcaaaaattgtacatgattatgataataactaacgcccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 23978149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 132 - 241
Target Start/End: Complemental strand, 16814930 - 16814820
Alignment:
Q  132 actaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagcttcccttcaaccctct 230  Q
    |||||||| ||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  16814930 actaaccctcttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccccacttgattgctaaagcttcccttcaaacctct 16814831  T
Q  231 tgttcttctct 241  Q
    || ||||||||    
T  16814830 tgctcttctct 16814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13620860 - 13620712
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  13620860 cataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 13620761  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  ||||||||||||  |  |||||||||||||||||    
T  13620760 aaatgcaaaaattgtacatgattatgaagaagactaacccccttacctt 13620712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29666063 - 29666208
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgag 99  Q
    |||||||||||||||||||||| ||||  || ||||||||||||| ||||||||||||| |||  |||| | ||||| |||||||||||||||| |||||    
T  29666063 catacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcaccccattttcatacaacaatgag 29666162  T
Q  100 aaaatgcaa-aattacacatgattatgataataactaaccccctta 144  Q
    ||| ||||| ||||  ||||||||||||| |  |||||||| ||||    
T  29666163 aaattgcaataattgaacatgattatgatgaagactaacccactta 29666208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 15862660 - 15862718
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  15862660 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 15862718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1657822 - 1657764
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  1657822 catacaattatcatcaattcatgcatccaaacataacatcacagttagagcacgaattt 1657764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35009513 - 35009455
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  35009513 catacaattatcatcaattcatgcatacaaacttaacatcacagttagagcacgaattt 35009455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23153636 - 23153694
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  23153636 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 23153694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27751614 - 27751672
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||| |||||||||||||||||||||||||||||||||   |||||||||||||    
T  27751614 catacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaattt 27751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 4991396 - 4991470
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgatta-tccttaatcctagcttcaattcagctccta 190  Q
    |||||||||||||  |||||||||||||||||||||| |||||| |||| ||  || ||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctccta 4991470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 24549171 - 24549410
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  24549171 catacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgaga 24549270  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  24549271 aaatgcaaaatt--acatgattatgataatcactaacccccttaccttagaagttgattatccttaaccctagcttcacttcagctcctaggtcacccac 24549368  T
Q  201 ttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    ||||||||| |||||| |||| |||| |||||||||||||||    
T  24549369 ttgattcctcaagcttcccctccaacactcttgttcttctct 24549410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 21852027 - 21851786
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  21852027 catacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagc 21851928  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  21851927 aaatgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccac 21851829  T
Q  201 ttgattcctaaagctt--cccttcaaccctcttgttcttctct 241  Q
    ||||||||| ||||||  |||| |||| |||||||||||||||    
T  21851828 ttgattcctcaagcttccccctccaacactcttgttcttctct 21851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 21844634 - 21844393
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  21844634 catacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagc 21844535  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  21844534 aaatgcaaaaat-tacatgattgtgataataactaacccccttaccgttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccac 21844436  T
Q  201 ttgattcctaaagctt--cccttcaaccctcttgttcttctct 241  Q
    ||||||||| ||||||  |||| |||| |||||||||||||||    
T  21844435 ttgattcctcaagcttccccctccaacactcttgttcttctct 21844393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30120912 - 30121153
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  30120912 catacaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgaga 30121011  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
      || ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| |||  ||||||||||||||||||||||||||    
T  30121012 ttatacaaaaattacacatgattatgataatcactaacccccttacctttgaagatgattatctctaacccttacttcaattcagctcctaggtcaccca 30121111  T
Q  200 cttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  30121112 cttgattcctaaagcttcccttcaaccctcttgctcttctct 30121153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 6774320 - 6774082
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||| |||||||||    
T  6774320 catacaattatcatcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatataacatgaga 6774221  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||| |||||||||    
T  6774220 aaatgcaaaatt--acatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccac 6774124  T
Q  201 ttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    ||||||||| |||||| |||| |||| |||||||||||||||    
T  6774123 ttgattcctcaagcttcccctccaacactcttgttcttctct 6774082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 271426 - 271183
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  271426 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 271327  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  271326 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 271227  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  271226 aattgattccccaagctttcccttcaacactcttgttcttctct 271183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 644494 - 644737
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  644494 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 644593  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  644594 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 644693  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  644694 aattgattccccaagctttcccttcaacactcttgttcttctct 644737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 830229 - 830472
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  830229 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 830328  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  830329 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 830428  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  830429 aattgattccccaagctttcccttcaacactcttgttcttctct 830472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 15319225 - 15318982
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || |||  |||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  15319225 cataccataatcatcaattcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 15319126  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  15319125 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 15319026  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| || |||||||| |||||||||||||||    
T  15319025 aattgattccccaagcttttccttcaacactcttgttcttctct 15318982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 15499594 - 15499351
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || |||  |||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  15499594 cataccataatcatcaattcaagcacaagaaaatagtatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 15499495  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  15499494 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 15499395  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| || |||||||| |||||||||||||||    
T  15499394 aattgattccccaagcttttccttcaacactcttgttcttctct 15499351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 22088860 - 22088617
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||| ||||||||||||||||||||    
T  22088860 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaacatgaga 22088761  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  22088760 aaatgcaaagattgtacatgattatgatgataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 22088661  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  22088660 aattgattccccaagctttcccttcaacactcttgttcttctct 22088617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16674454 - 16674245
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||||||||     
T  16674454 catacaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaacccattttcatacaacatgagc 16674355  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| ||||||||||||||||||||||||| ||||  |||||  || ||  || ||||||||||||||| || |||||||||    
T  16674354 aaatgcaaaaat-tacatgattgtgataataactaacccccttaccttagaagaagatta-actcaactcttgcttcaattcagctcataagtcacccac 16674257  T
Q  201 ttgattcctaaa 212  Q
    ||||||||||||    
T  16674256 ttgattcctaaa 16674245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 22006324 - 22006134
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  22006324 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 22006225  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||||||||  ||||| |   ||  || ||||||||||||||||||    
T  22006224 aaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagaagattaactcaaactcttgcttcaattcagctccta 22006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 13720994 - 13720804
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  13720994 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 13720895  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  13720894 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 13720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16195421 - 16195611
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  |||||| |||||||||| ||| ||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  16195421 cataccataatcatcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 16195520  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||| ||||||||||||||| |||| |||||| ||  ||  || ||||||||||| ||||||    
T  16195521 aaatgcaaaaattgtacatgattatgataataattaacccccttaccttagaagatgattaacccaaactcttgcttcaattcaactccta 16195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 13662331 - 13662141
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||  ||||||||| |  || ||| |||||||||||||||||||||||  ||  ||||||| |||||||||||||||||||||||||||    
T  13662331 cataccataatcatncattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaacatgaga 13662232  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  13662231 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 13662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 16873117 - 16872964
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  16873117 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 16873018  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaag 153  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||    
T  16873017 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaag 16872964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17345758 - 17345816
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  17345758 catacaattatcatcaattcatgcatataaacataacatcacagttagagcacgaattt 17345816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16405049 - 16404991
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  16405049 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 16404991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 16193790 - 16193732
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  16193790 catacaattatcatcaattcatgcatacaaacatatcatcatagttggagcacgaattt 16193732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24928865 - 24928807
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||||||||||||  |||||||   ||||||||||||    
T  24928865 catacaattatcatcaattcatgcatacaaacatataatcacagttggagcacgaattt 24928807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5238276 - 5238334
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  5238276 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 5238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22907288 - 22907230
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  22907288 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 22907230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 24661322 - 24661264
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  24661322 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 24661264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43373542 - 43373484
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||| ||||||||||||||||||||||||||| || ||||||||   ||||||||||||    
T  43373542 catataattatcatcaattcatgcatacaaacgtatcatcacagttggagcacgaattt 43373484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43685735 - 43685793
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  43685735 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 43685793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 177; Significance: 2e-95; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 36283 - 36523
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||| |||||||||||||||||||  |||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  36283 catacaactaacatcaattcatacatacaaacataacatcactacaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaacatgaga 36382  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  36383 atatgcaaaattacacatgattatgataatcattaacccccttacctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcacccac 36482  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  36483 ttgattcctaaagctttccttcaaccctcttgctcttctct 36523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 237
Target Start/End: Complemental strand, 169951 - 169736
Alignment:
Q  24 catacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacacatgatta 123  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  169951 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattatacatgatta 169852  T
Q  124 tgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagcttc-cctt 221  Q
    ||||||| |||||||||||||| ||||||| ||||||||  ||| ||| ||||||||||||||| || |||| |||||||||||||| ||||||| ||||    
T  169851 tgataatcactaacccccttacttttgaagatgattatcactaacccttgcttcaattcagctcttatgtcaccccacttgattcctcaagcttcgcctt 169752  T
Q  222 caaccctcttgttctt 237  Q
    |||| |||||||||||    
T  169751 caactctcttgttctt 169736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 154073 - 153883
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  154073 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 153974  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| |   ||  || ||||||||||||||||||    
T  153973 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaactcaaactcttgcttcaattcagctccta 153883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48787 - 48845
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  48787 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 48845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 31737 - 31497
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||| |||||||||||||||  |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  31737 catacaactaacatcaattcatgcattcaaacataacatcaccacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgaga 31638  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  31637 atatgcaaaattacacatgattatgataatcactaacccccttacatttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccac 31538  T
Q  201 ttgattcctaaagcttcccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  31537 ttgattcctaaagcttcccttcaaccctcttgctcttctct 31497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 128241 - 128200
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  128241 tacaattatcatcaattcatgcatacaaacatatcatcacag 128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 43187 - 43427
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgag- 99  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  43187 catacaattatcatcaattcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaacccattttcatacaacatgaga 43286  T
Q  100 aaaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccca 199  Q
    |||||||||||||  ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  43287 aaaatgcaaaatt--acatgtttgtgatagtaactaacccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctagatcaccca 43384  T
Q  200 cttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    |||||||||| |||||| |||| |||| |||||||||||||||    
T  43385 cttgattcctcaagcttcccctccaacactcttgttcttctct 43427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 39293 - 39536
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  39293 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 39392  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  39393 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 39492  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  39493 aattgattccccaagctttcccttcaacactcttgttcttctct 39536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 13387 - 13171
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  13387 catacaattatcatcaattcatgcatacaaacataacatcacactaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgaga 13288  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    ||||| ||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||    
T  13287 aaatgaaaaatt--acatgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagttcctaggtcacccac 13190  T
Q  201 ttgattcctaaagcttccc 219  Q
    ||||||||| |||||||||    
T  13189 ttgattcctcaagcttccc 13171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 41270265 - 41270478
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  41270265 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagt 41270364  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    | |||||||| |  |||||||| ||||||||||||||||||||||||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||    
T  41270365 agatgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccac 41270463  T
Q  201 ttgattcctaaagct 215  Q
    |||||||||||||||    
T  41270464 ttgattcctaaagct 41270478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 55316409 - 55316622
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  55316409 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagc 55316508  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| ||||||||||||||||| ||||||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||    
T  55316509 aaatgcaaaaat-tacatgattgtgataataactaacccctttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccac 55316607  T
Q  201 ttgattcctaaagct 215  Q
    |||||||||||||||    
T  55316608 ttgattcctaaagct 55316622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 1467805 - 1467562
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  1467805 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 1467706  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  1467705 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 1467606  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  1467605 aattgattccccaagctttcccttcaacactcttgttcttctct 1467562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 49232626 - 49232869
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  49232626 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 49232725  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||| ||||||||||     
T  49232726 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcataggtcaccca 49232825  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  49232826 aattgattccccaagctttcccttcaacactcttgttcttctct 49232869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16821329 - 16821517
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||     
T  16821329 catacaattatcatcaatttatgcatacaaacataacatcacagcaagagcacggatttgacataaattgttcatcaacccattttcatacaacatgagc 16821428  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctag 191  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||||||||  ||||| |   ||  || |||||||||||||||||||    
T  16821429 aaatgcaaaatt--acatgattgtgataataactaacccccttacctttgaagaagattaacacaaactcttgcttcaattcagctcctag 16821517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 12264858 - 12264614
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  12264858 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 12264759  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||  |  || | | ||||||||||||||||||||||||||     
T  12264758 aaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctcctaggtcacccc 12264659  T
Q  199 -acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
     | ||||||||| |||| ||||||||||| |||||||||||||||    
T  12264658 aaattgattcctcaagctttcccttcaacactcttgttcttctct 12264614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 12812031 - 12812274
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||| ||||||||||||||||||| |||  |||||| ||||||||||||||||||||| ||||||    
T  12812031 cataccataatcatcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaatatgaga 12812130  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  12812131 aaatgcaaagattgtacatgattatgataataactaacccccttacctttaaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 12812230  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  12812231 aattgattccccaagctttcccttcaacactcttgttcttctct 12812274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 22275399 - 22275642
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||  |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  22275399 cataccataatcatcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 22275498  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||||||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||   | ||||||||||||||||||| | | |||    
T  22275499 aaatgcaaaatttgtacatgattatgataataactaacccccttacctttgaagatgattaaccttaacttttgcttcaattcagctcctagcttacccc 22275598  T
Q  199 acttgattcctaaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| ||||  ||||||||||  | |||||||||||||    
T  22275599 aattgattcctcaagctattcccttcaaatc-cttgttcttctct 22275642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 15468406 - 15468216
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||| |||||||||||||||||  ||  |||||||| ||||||||||||||||||||||||||    
T  15468406 cataccataatcatcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaacatgaga 15468307  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||  ||||| || |||| || ||||||||||||||||||    
T  15468306 aaatgcaaaatttgtacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctccta 15468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 15615025 - 15615168
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaa 102  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||| |  |||||||||||||||||||||||||||||||||||||||||    
T  15615025 tacaattatcatcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaa 15615124  T
Q  103 atgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||  |||||||||||||||  |||||||||||||||||    
T  15615125 atgcaaaatt--acatgattatgataaagactaacccccttacctt 15615168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 25058929 - 25059119
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  25058929 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 25059028  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||   ||||||||||||||||||||||||||||||||||||||  ||||| || ||||  | ||||||||||||||||||    
T  25059029 aaatgcaaaaattgtgcatgattatgataataactaacccccttacctttgaagaagattaaccctaatttttgcttcaattcagctccta 25059119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 18897110 - 18896920
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  18897110 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgaga 18897011  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||| ||||| ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  18897010 aaatacaaaacttgtacatgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctccta 18896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 18911183 - 18911373
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  18911183 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 18911282  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  18911283 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 18911373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 12902156 - 12902008
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || |||||||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||||    
T  12902156 cataccataatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgaga 12902057  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||||||||    
T  12902056 aaatgcaaaaattgaacatgattatgatgataactaacccccttacctt 12902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15936701 - 15936553
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||||    
T  15936701 catacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgaga 15936602  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  |||||||||| || ||||||||||||| ||||||    
T  15936601 aaatgcaaaaattgaacatgattataatgataactaacccccatacctt 15936553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15938543 - 15938395
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||  |||||||||| ||| ||||   ||||||| ||||   |  |||||||||||||||||||||||||||||||||||    
T  15938543 catacaattatcatcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatacaacatgaga 15938444  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  |||||||||| || ||||||||||||||||||||    
T  15938443 aaatgcaaaaattgaacatgattataatgataactaacccccttacctt 15938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 54651647 - 54651795
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||||    
T  54651647 catacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgaga 54651746  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    || ||| ||||||  ||||||||||||| |  || ||||||||||||||    
T  54651747 aattgcaaaaattgaacatgattatgatgaagacaaacccccttacctt 54651795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 5228503 - 5228692
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |   | |||||||||||||||||||||||||||  ||  ||| |||||||||||||||||||||  ||||||||    
T  5228503 cataccataatcatcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaat-gttcatcaacccattttcataacacatgaga 5228601  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  ||||||||||||| |||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  5228602 aaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctccta 5228692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 44229175 - 44229323
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgag 99  Q
    ||||| || |||||||||||||||| |  || ||| ||||||| |||||||||| |||| |||| |||||||||||||||||||||||||||| ||||||    
T  44229175 cataccataatcatcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatacaaccatgag 44229274  T
Q  100 aaaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||    ||||||  |  |||||||||| | ||| ||||||||||||||    
T  44229275 aaatgaaaaaatttgaattgattatgatgaaaacaaacccccttacctt 44229323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 14842635 - 14842446
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaaca--tga 98  Q
    |||||||||||| |||||||||||||||||||||| ||||||||   ||||||||||||  ||  |||| | ||| | | ||  |||||||||||  |||    
T  14842635 catacaattatcttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcaca-attcatacaacatttga 14842537  T
Q  99 gaaaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||  |||||| | | | |||||||||||||  ||||||||||||||||| ||||  ||||| || |||  || ||||||||||||||||||    
T  14842536 gaatttgcaaagtga-agatgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctccta 14842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13839083 - 13839141
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  13839083 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 13839141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 15859098 - 15859040
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  15859098 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 15859040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 51158092 - 51158034
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  51158092 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 51158034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 12030219 - 12030163
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  12030219 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 12030163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17912556 - 17912516
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatca 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  17912556 catacaattatcatcaattcatgcatacaaacatatcatca 17912516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2449312 - 2449254
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  2449312 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 2449254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 8268683 - 8268609
Alignment:
Q  116 catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  8268683 catgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 8268609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 8275783 - 8275709
Alignment:
Q  116 catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  8275783 catgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctccta 8275709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 2050001 - 2050057
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||| ||||||||||||| | ||||||   ||||||||||||    
T  2050001 tacaattatcatcaattcaggcatacaaacatatcgtcacagttggagcacgaattt 2050057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11986240 - 11986182
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||| || ||||||| || || ||||||||||||  |||||||||||||    
T  11986240 catacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaattt 11986182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 18059824 - 18059581
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  18059824 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgaga 18059725  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||| |||    
T  18059724 aaatgcaaagattatacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccc 18059625  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| |||| ||||||||||| |||||||||||||||    
T  18059624 aattgattcctcaagctttcccttcaacactcttgttcttctct 18059581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5072450 - 5072237
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||     
T  5072450 catacaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacttgagt 5072351  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| ||||||||||||||||||||||||||||||  ||||| || ||||| | |||||||||||||||||| |||||||||    
T  5072350 aaatgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatctttgcttcaattcagctcctaagtcacccac 5072252  T
Q  201 ttgattcctaaagct 215  Q
    |||||||||||||||    
T  5072251 ttgattcctaaagct 5072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 17004828 - 17005071
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  17004828 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 17004927  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  17004928 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 17005027  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  17005028 aattgattccccaagctttcccttcaacactcttgttcttctct 17005071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 17148757 - 17149001
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||||||| ||| |||||||||||||||  |   |||||||||||||||||||||||||||||||||||    
T  17148757 cataccataatcatcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgaga 17148856  T
Q  101 aaatgc-aaaattacacatgattatgataataactaa-cccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cc 197  Q
    |||||| ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||  || ||| |||||||||||||||||| |||| ||    
T  17148857 aaatgcaaaaattgtacatgattatgataataactaaccccccttacctttgaagttgattatccccaacccttgcttcaattcagctcctatgtcaccc 17148956  T
Q  198 cacttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  17148957 cacttgattcctcaagctttcccttcaaccctcttgttcttctct 17149001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 38055157 - 38054914
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || |||||||||||| || ||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  38055157 cataccataatcatcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 38055058  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    | ||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  38055057 agatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 38054958  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  38054957 aattgattccccaagctttcccttcaacactcttgttcttctct 38054914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 22227998 - 22228185
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||| |  || |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  22227998 catacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 22228097  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctc 187  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || |||||||||||||||    
T  22228098 aaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctc 22228185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 22232695 - 22232882
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||| |  || |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  22232695 catacaattatcatcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 22232794  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctc 187  Q
    |||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || |||||||||||||||    
T  22232795 aaatgcaaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctc 22232882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 41 - 241
Target Start/End: Complemental strand, 19962525 - 19962322
Alignment:
Q  41 acagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa-attacacatgattatgataataactaaccc 139  Q
    ||||||||||||||||||| |||  |||||| ||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||    
T  19962525 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19962426  T
Q  140 ccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgttctt 237  Q
    |||||||||||||||||||||||  ||| ||| |||||||||||||||||||||| ||| | |||| |||  |||| ||||||||||| |||||||||||    
T  19962425 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgcccaaattgaatccccaagctttcccttcaacactcttgttctt 19962326  T
Q  238 ctct 241  Q
    ||||    
T  19962325 ctct 19962322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2116444 - 2116589
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |  ||||||||||||||||||||||||| |||||||||||||    
T  2116444 catacaattatcatcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaacccatttttatacaacatgaga 2116543  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||||  |||||||||||||||| ||||||||| |||||||    
T  2116544 aaatgcaaaatt--acatgattatgataatcactaacccctttacctt 2116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45051612 - 45051757
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| |  |||||||||||||||||||||||||||||||||||||||    
T  45051612 catacaattatcatcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgaga 45051711  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||||||||  ||||||||||||||||  |||||||||||||||||    
T  45051712 aaatgcaaaat--cacatgattatgataaagactaacccccttacctt 45051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18601180 - 18601071
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||     
T  18601180 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaacccattttcatacaacatgagc 18601081  T
Q  101 aaatgcaaaa 110  Q
    ||||||||||    
T  18601080 aaatgcaaaa 18601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 153
Target Start/End: Original strand, 46523590 - 46523731
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 111  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  46523590 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 46523689  T
Q  112 tacacatgattatgataataactaacccccttacctttgaag 153  Q
       |||||||||||||||||||||||||||||||||| ||||    
T  46523690 ggaacatgattatgataataactaacccccttaccttagaag 46523731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 22035681 - 22035827
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||||||||||||||||    
T  22035681 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22035780  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  22035781 accttagaagaagattaacccaaactcttgcttcaattcagctccta 22035827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 7640956 - 7640810
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||  | | ||||||||||||||||||||||||||    
T  7640956 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 7640857  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||| ||||  ||||| ||  ||  || ||||||||| ||||||||    
T  7640856 accttagaagaagattaacccaaactcttgcttcaatttagctccta 7640810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 15861358 - 15861284
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctag 191  Q
    |||||||||||||  |||||||||||||||||||||| |||||| || |||  || |||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctag 15861284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 20913221 - 20913277
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  20913221 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 20913277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 20931536 - 20931592
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  20931536 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 20931592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20893700 - 20893657
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  20893700 catacaattatcatcaattcatgcatacaaacatatcatcacag 20893657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20445868 - 20445910
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  20445868 catacaattatcatcaattcatgcatacaaacatatcatcaca 20445910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37844524 - 37844484
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatca 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  37844524 catacaattatcatcaattcatgcatacaaacatatcatca 37844484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20531633 - 20531667
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacata 35  Q
    |||||||||||||||||||||||||||||||||||    
T  20531633 catacaattatcatcaattcatgcatacaaacata 20531667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41394411 - 41394469
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||   ||||||||||||    
T  41394411 catacaattatcatcaatttatgcatacaaacatatcatcatagttggagcacgaattt 41394469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51452681 - 51452721
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatca 41  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  51452681 catacaattattatcaattcatgcatacaaacatatcatca 51452721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1366 - 1153
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||     
T  1366 catacaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagt 1267  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccac 200  Q
    |||||||||| |  |||||||| |||||||||||||||||| |||||||||||  ||||| || ||||||| |||||||||||||||||| |||||| ||    
T  1266 aaatgcaaaaat-tacatgattgtgataataactaacccccctacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcaccaac 1168  T
Q  201 ttgattcctaaagct 215  Q
    |||||||||||||||    
T  1167 ttgattcctaaagct 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 21178 - 20936
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  21178 catataattatcatcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 21079  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccca 199  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||  | ||| ||| ||||||||||||||||||| | | ||||    
T  21078 aaatgcaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttacccca 20979  T
Q  200 cttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
     ||||||||| |||| ||||||||||  |||||||||||||||    
T  20978 attgattcctcaagctttcccttcaaaactcttgttcttctct 20936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 14123 - 13882
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||    
T  14123 catataattatcatcaattcatgcatacagacataacatcacagcaagagcacgatttag-caagaattgtgcatcaacccattttcatacaacatgaga 14025  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccca 199  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||  | ||| ||| ||||||||||||||||||| | | ||||    
T  14024 aaatgcaaaattgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttacccca 13925  T
Q  200 cttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
     ||||||||| |||| ||||||||||  |||||||||||||||    
T  13924 attgattcctcaagctttcccttcaaaactcttgttcttctct 13882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 37 - 206
Target Start/End: Original strand, 29388 - 29558
Alignment:
Q  37 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaa-attacacatgattatgataataacta 135  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  29388 catcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 29487  T
Q  136 acccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgatt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29488 acccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctaggtcacccacttgatt 29558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 29565 - 29627
Alignment:
Q  180 ttcagctcctaggtcacccacttgattcctaaagctt-cccttcaaccctcttgttcttctct 241  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||| |||||||||||||||    
T  29565 ttcagctcctaggtcacccacttgattcctcaagcttcccctccaacactcttgttcttctct 29627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31499 - 31742
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||| ||| |  || ||| ||||||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||||    
T  31499 cataccataatcatcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgaga 31598  T
Q  101 aaatgcaaa-attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcaccc- 198  Q
    ||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||     
T  31599 aaatgcaaagattgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccca 31698  T
Q  199 acttgattcctaaagc-ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||  |||| ||||||||||| |||||||||||||||    
T  31699 aattgattccccaagctttcccttcaacactcttgttcttctct 31742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 39845 - 39935
Alignment:
Q  10 atcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||||||||||| |  || |||  ||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  39845 atcatcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 64570 - 64372
Alignment:
Q  16 aattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattaca 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |    
T  64570 aattcatgcatataaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaat-ta 64472  T
Q  116 catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| |||||||||||||||||| |||||    
T  64471 catgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccttaagct 64372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 107936 - 108084
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||   |  |||||||||||||||||||||||||||||||||||    
T  107936 catacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgaga 108035  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  |||||||||| || ||||||||||||||||||||    
T  108036 aaatgcaaaaattgaacatgattataatgataactaacccccttacctt 108084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9411 - 9266
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9411 catacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagc 9312  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||    
T  9311 aaatgcaaaatt--acatgattgtgataataactaacccccttacctt 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16309 - 16164
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  16309 catacaattatcatcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagc 16210  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||    
T  16209 aaatgcaaaatt--acatgattgtgataataactaacccccttacctt 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 3152 - 3341
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  3152 catacaattatcatcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 3251  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    ||||||||||||  |||| ||||||||||||| ||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  3252 aaatgcaaaattgtacataattatgataataattaacccccttaccttagaagaagattaaccgaaactcttgcttcaattcagctccta 3341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 225 - 411
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  225 catacaatcatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatataacatgag- 323  T
Q  101 aaatgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
     |||||||||||  |||||||| ||||||||||||||||||||||||| ||||  |||||  |  ||  || ||||||||||||||||||    
T  324 caatgcaaaatt--acatgattttgataataactaacccccttaccttagaagaagattaatccaaactctcgcttcaattcagctccta 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 5278 - 5088
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||| |  || ||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  5278 catacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttcatacaacgtgaga 5179  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  ||||||||||||||||||||||| ||||||||||||||| |||||| || |||  || ||||||||||||||||||    
T  5178 aaatgcaaaaattgtacatgattatgataataactaactcccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 5088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 3912 - 4102
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||||||||||||||||||||||| |  || ||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  3912 catacaattatcatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgaga 4011  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||| ||||||||||| |||| |||||| || |||  || ||||||||||||||||||    
T  4012 aaatgcaaaaattgtacatgattatgataataactaaaccccttaccttagaagatgattaaccctaactcttgcttcaattcagctccta 4102  T

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Target: scaffold0183 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 215
Target Start/End: Original strand, 6831 - 7002
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | ||||||||||||||||||||||||||    
T  6831 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 6930  T
Q  144 acctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||||| ||||  ||||| ||  ||  || |||||||||||||||||| |||||||||||||||| |||||||    
T  6931 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcgtaaagct 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 190
Target Start/End: Complemental strand, 10778 - 10624
Alignment:
Q  37 catcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgc-aaaattacacatgattatgataataacta 135  Q
    ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||    
T  10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 10679  T
Q  136 acccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||||||||||||||| |||||| || |||  || ||||||||||||||||||    
T  10678 acccccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7522 - 7278
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || ||| |||||||||||| |  || ||| ||||||| |||||||||||||||   |  |||||||||||||||||||||||||||||||||||    
T  7522 cataccataatcttcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaacatgaga 7423  T
Q  101 aaatgcaaaattaca-catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-ccc 198  Q
    |||||||||| |  | ||||||||||||||||||||||||||||||||||||||  ||||| || |||| || ||||||||||||||||||| | | |||    
T  7422 aaatgcaaaaatggaacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctcctagcttacccc 7323  T
Q  199 acttgattcctaaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||||||| ||||  ||| ||||||  | |||||||||||||    
T  7322 aattgattcctcaagctattctcttcaaaacccttgttcttctct 7278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1580 - 1390
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| ||| ||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  1580 cataccataatcatcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 1481  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||| ||  || ||||||||||||||||||    
T  1480 aaatgcaaaaattgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctccta 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 1641 - 1451
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||| |||||| |||  ||  |||||||||||||||||||||||||||||||||||    
T  1641 cataccataatcatcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaacatgaga 1542  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctccta 190  Q
    |||||| ||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  || ||| ||||||||||||||||||    
T  1541 aaatgcaaaaattgaacatgattatgataataactaacccccttaccttagaagaagattaacccaaacccttgcttcaattcagctccta 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 23769 - 23600
Alignment:
Q  47 agagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaacccccttac 145  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||  | | ||| |||||||||||||||||||||||     
T  23769 agagcacgaatttgacatgagttgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgaatatgataataactaacccccttaa 23670  T
Q  146 ctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||| ||||  ||||| ||  ||  || |||||||||||| ||||| ||||||||||||||||||||||||    
T  23669 cttagaagaagattaacccaaactcttgcttcaattcagttcctaagtcacccacttgattcctaaagct 23600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 2593 - 2826
Alignment:
Q  12 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaa- 110  Q
    |||||||||||||| |  || ||| |||||| |||||||||||||||   ||  |||||||||||||||||||||||||||||||||||||||||||||     
T  2593 catcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 2692  T
Q  111 -ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcc 208  Q
     ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||| | | |||| ||||||||    
T  2693 tttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctagcttaccccaattgattcc 2792  T
Q  209 taaagc--ttcccttcaaccctcttgttcttctct 241  Q
    | ||||  ||||||||||  | |||||||||||||    
T  2793 tcaagctattcccttcaaatc-cttgttcttctct 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 117 - 241
Target Start/End: Original strand, 130880 - 131006
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagc- 214  Q
    |||||||||||||  |||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||| |||| ||||||||| ||||     
T  130880 atgattatgataaagactaacccccttacctttgaagatgattatgcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 130979  T
Q  215 ttcccttcaaccctcttgttcttctct 241  Q
    ||||||||||| |||||||||||||||    
T  130980 ttcccttcaacactcttgttcttctct 131006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 89528 - 89470
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||    
T  89528 catacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaattt 89470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 45220 - 45369
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgag 99  Q
    ||||||||||||||||||||||||| |  || ||| ||||||| |||| |||||||||| |||  |||| |||||||||||||||||||||||| |||||    
T  45220 catacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaacccattttcatacaacaatgag 45319  T
Q  100 aaaatgcaa-aattacacatgattatgataataactaacccccttacctt 148  Q
    ||| ||||| ||||  ||||||||||||| |  |||||||||||||||||    
T  45320 aaattgcaataattgaacatgattatgatgaagactaacccccttacctt 45369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 54606 - 54755
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgag 99  Q
    ||||||||||||||||||||||||| |  || ||| ||||||||||||  ||||||||| |||  |||| |||||||||||||||||||||||| |||||    
T  54606 catacaattatcatcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgag 54705  T
Q  100 aaaatgcaa-aattacacatgattatgataataactaacccccttacctt 148  Q
    ||| ||||| ||||  ||||||||||||| |  ||||||| |||||||||    
T  54706 aaattgcaataattgaacatgattatgatgaagactaaccaccttacctt 54755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 10405 - 10257
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || ||| |||||||||||||||||||||||  ||  |||| ||||||||||||||||||||||||||||||    
T  10405 cataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgaga 10306  T
Q  101 aaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    |||||| ||||||  ||||||||||||  |  || ||||||||||||||    
T  10305 aaatgcaaaaattgaacatgattatgaagaagacaaacccccttacctt 10257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 45 - 148
Target Start/End: Original strand, 7443 - 7547
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattacaca-tgattatgataataactaaccccctt 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | | |||||||||| | ||| |||||||||    
T  7443 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 7542  T
Q  144 acctt 148  Q
    |||||    
T  7543 acctt 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 54064 - 54212
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||||| |  || | | |||||||| ||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||    
T  54064 cataccataatcatcaattcatgcacaagaaaacagcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcataaaacatgaga 54163  T
Q  101 aaatgcaaaa-ttacacatgattatgataataactaacccccttacctt 148  Q
    |||||||||| ||  |  |||||||||| | ||| ||||||||||||||    
T  54164 aaatgcaaaaatttgaattgattatgatgaaaacaaacccccttacctt 54212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 12149 - 12045
Alignment:
Q  45 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaa-catgagaaaatgcaaaattacaca-tgattatgataataactaaccccct 142  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| ||||||  | | |||||||||||||||||||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgag-aaatgaaaaatttgaaattgattatgataataactaaccccct 12051  T
Q  143 tacctt 148  Q
    ||||||    
T  12050 tacctt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3603 - 3712
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaga 100  Q
    ||||| || |||||||||||||| | |  || | |||||||||| |||||||| |||||  ||| ||||||||||||||||||||||||| |||||||||    
T  3603 cataccataatcatcaattcatggacaagaaaacaacatcacagtaagagcactaatttagcatcaattgttcatcaacccattttcataaaacatgaga 3702  T
Q  101 aaatgcaaaa 110  Q
    ||||||||||    
T  3703 aaatgcaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34224 - 34076
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaac-atgag 99  Q
    ||||| || |||||||||||||||| |  || ||| | |||||||||||||||||||||  ||  |||| |||||||||||| ||||||||||| |||||    
T  34224 cataccataatcatcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgag 34126  T
Q  100 aaaatgc-aaaattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||| ||||||  ||||||||||||| |  |||||||||||||||||    
T  34125 aaaatgcaaaaattgaacatgattatgatgaagactaacccccttacctt 34076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 247516 - 247458
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||    
T  247516 catacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattt 247458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 154373 - 154282
Alignment:
Q  124 tgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttgattcctaaagct 215  Q
    ||||||||||||||||||||||||| ||||  ||||| ||  ||  || |||||||||||||||||| ||||||||||||||||||||||||    
T  154373 tgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 154282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41837 - 41895
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  41837 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 41895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34534 - 34476
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  34534 catacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaattt 34476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 34450 - 34374
Alignment:
Q  75 tcaacccattttcatacaaca--tgagaaaatgcaa-aattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||| |||||||||||  ||||||| ||||| || |  ||||||||||||||||||||||||| ||||||||    
T  34450 tcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgataataactaaccctcttacctt 34374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 13342 - 13268
Alignment:
Q  74 atcaacccattttcatacaacatgagaaaatgcaaaa-ttacacatgattatgataataactaacccccttacctt 148  Q
    |||||||||||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||    
T  13342 atcaacccattt-catacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacctt 13268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 241
Target Start/End: Complemental strand, 17241 - 17115
Alignment:
Q  117 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtca-cccacttgattcctaaagc- 214  Q
    ||||||||||| |  ||||||||||||||||| |||| | ||||| | ||| ||| ||||||||||||||||||||||| |||| ||||||||| ||||     
T  17241 atgattatgatgaagactaacccccttaccttagaagattattattcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 17142  T
Q  215 ttcccttcaaccctcttgttcttctct 241  Q
    |||| |||||| ||| ||| |||||||    
T  17141 ttcctttcaacactcctgtgcttctct 17115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12302 - 12360
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  12302 catacaattatcatcaattcatgcatacaaacatatcatcacagttagagcacgaattt 12360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8254 - 8196
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  8254 catacaattatcaccaattcatgcatacaaacataacatcacagttagagcacgaattt 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 26487 - 26431
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||   ||||||||||||    
T  26487 tacaattatcatcaattcacgcatacaaacatatcatcaaagttggagcacgaattt 26431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13695 - 13753
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  13695 catacaattatcatcaattcatgcatacaaacataacatcaaagttagagcacgaattt 13753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 13779 - 13855
Alignment:
Q  75 tcaacccattttcatacaaca--tgagaaaatgcaa-aattacacatgattatgataataactaacccccttacctt 148  Q
    ||||||||| |||||||||||  ||||||| ||||| || || ||||||||||||| |  |||||||||||||||||    
T  13779 tcaacccatattcatacaacaaatgagaaattgcaataaataaacatgattatgatgaagactaacccccttacctt 13855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 42677 - 42709
Alignment:
Q  117 atgattatgataataactaacccccttaccttt 149  Q
    ||||||||||||| |||||||||||||||||||    
T  42677 atgattatgataaaaactaacccccttaccttt 42709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 608 - 550
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  608 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6138 - 6080
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  6138 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 6080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3379 - 3437
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||| |||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  3379 catacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaattt 3437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3656 - 3598
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  3656 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 3598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 1313 - 1371
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| |||||||||||||||| |||||| ||||| ||   ||||||||||||    
T  1313 catacaattattatcaattcatgcatactaacatatcatcaaagttggagcacgaattt 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1030 - 972
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  1030 catacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9038 - 9096
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  9038 catacaattatcatcaattcatgcatacaaacatatcatcacagatggagcacgaattt 9096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 148912 - 148953
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  148912 tacaattatcatcaattcatgcatacaaacatatcatcacag 148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 19397 - 19453
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  19397 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 19453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 21481 - 21537
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  21481 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 21537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 36985 - 36929
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  36985 tacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 41921 - 41976
Alignment:
Q  4 acaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  41921 acaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaattt 41976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 5718 - 5776
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    |||||||| |||||||||||||||||||||||||||||||| ||   ||||||||||||    
T  5718 catacaatcatcatcaattcatgcatacaaacataacatcaaagttggagcacgaattt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 48376 - 48434
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||   ||||||||||||    
T  48376 catacaattatcatcaattcatgcatacaaacatatcattacagttggagcacgaattt 48434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 123238 - 123196
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  123238 catacaattatcatcaattcatgcatacaaacatatcatcaca 123196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 9069 - 9109
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcaca 43  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  9069 tacaattatcatcgattcatgcatacaaacataacatcaca 9109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 51254 - 51198
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||||||||||||||| ||| ||||||||   ||||||||||||    
T  51254 tacaattatcatcaattcatgcatacaaatatatcatcacagttggagcacgaattt 51198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 172094 - 172137
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  172094 catacaattatcatcaattcatccatacaaacatatcatcacag 172137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 177797 - 177840
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  177797 catacaattatcatcaattcatccatacaaacatatcatcacag 177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22729 - 22787
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  22729 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 22787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 26984 - 27042
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  26984 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 27042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1656 - 1598
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  1656 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 56173 - 56115
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||||| ||||||| || || ||||||||||||  |||||||||||||    
T  56173 catacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaattt 56115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 37140 - 37082
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||| ||||||||||||||||||||||| ||||| ||   ||||||||||||    
T  37140 catacaattattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt 37082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 8202 - 8257
Alignment:
Q  5 caattatcatcaatt-catgcatacaaacataacatcacagcaagagcacgaattt 59  Q
    ||||||||||||||| |||||||||||||||| ||||| ||  |||||||||||||    
T  8202 caattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 272214 - 272257
Alignment:
Q  1 catacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||    
T  272214 catacaattatcatcaattcattcatacaaacatatcattacag 272257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 10854 - 10908
Alignment:
Q  5 caattatcatcaatt-catgcatacaaacataacatcacagcaagagcacgaatt 58  Q
    ||||||||||||||| |||||||||||||||| ||||| ||  ||||||||||||    
T  10854 caattatcatcaatttcatgcatacaaacatatcatcatagatagagcacgaatt 10908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 5133 - 5092
Alignment:
Q  3 tacaattatcatcaattcatgcatacaaacataacatcacag 44  Q
    ||||||||||||||||||| ||||||||||||| | ||||||    
T  5133 tacaattatcatcaattcacgcatacaaacatatcgtcacag 5092  T

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