View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13955_low_63 (Length: 243)

Name: NF13955_low_63
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13955_low_63
NF13955_low_63
[»] scaffold0106 (2 HSPs)
scaffold0106 (133-240)||(48764-48871)
scaffold0106 (1-70)||(48934-49003)
[»] chr7 (42 HSPs)
chr7 (1-69)||(19050070-19050138)
chr7 (1-69)||(17816863-17816931)
chr7 (1-70)||(127197-127266)
chr7 (1-69)||(144417-144485)
chr7 (1-69)||(13036505-13036573)
chr7 (1-70)||(3060712-3060781)
chr7 (1-69)||(12247504-12247572)
chr7 (1-69)||(12369226-12369294)
chr7 (1-69)||(13275551-13275619)
chr7 (1-69)||(26069001-26069069)
chr7 (1-69)||(26069659-26069727)
chr7 (1-69)||(26093446-26093514)
chr7 (1-69)||(45451562-45451630)
chr7 (1-70)||(7293760-7293829)
chr7 (1-66)||(14419625-14419690)
chr7 (8-69)||(34240607-34240668)
chr7 (1-69)||(13321781-13321849)
chr7 (13-69)||(32493475-32493531)
chr7 (1-67)||(7283463-7283528)
chr7 (1-63)||(31501942-31502004)
chr7 (3-69)||(49047080-49047146)
chr7 (1-70)||(1936424-1936492)
chr7 (1-70)||(2029701-2029770)
chr7 (13-70)||(12116288-12116345)
chr7 (1-66)||(44866011-44866075)
chr7 (1-69)||(11288212-11288280)
chr7 (1-69)||(12759775-12759843)
chr7 (14-69)||(3895794-3895849)
chr7 (13-67)||(4439542-4439596)
chr7 (13-67)||(4446971-4447025)
chr7 (13-67)||(10331962-10332016)
chr7 (13-67)||(14268310-14268364)
chr7 (41-70)||(13378287-13378316)
chr7 (13-66)||(13862339-13862392)
chr7 (1-66)||(35095601-35095666)
chr7 (13-66)||(36053432-36053485)
chr7 (41-70)||(37941548-37941577)
chr7 (1-69)||(110673-110740)
chr7 (1-69)||(16212532-16212599)
chr7 (13-69)||(16569391-16569447)
chr7 (13-69)||(16596215-16596271)
chr7 (19-67)||(45150326-45150374)
[»] chr4 (33 HSPs)
chr4 (1-69)||(122655-122723)
chr4 (1-70)||(25118588-25118657)
chr4 (1-69)||(13722482-13722550)
chr4 (1-69)||(16732966-16733034)
chr4 (1-69)||(8871858-8871926)
chr4 (1-69)||(53704139-53704207)
chr4 (1-66)||(54117676-54117741)
chr4 (1-69)||(23269319-23269387)
chr4 (1-66)||(34396052-34396117)
chr4 (1-69)||(15045603-15045671)
chr4 (1-69)||(15108753-15108821)
chr4 (1-69)||(18292928-18292996)
chr4 (1-69)||(20812933-20813001)
chr4 (1-69)||(44056710-44056777)
chr4 (5-69)||(44347620-44347684)
chr4 (1-69)||(9296276-9296345)
chr4 (13-66)||(13247219-13247272)
chr4 (1-66)||(45458253-45458318)
chr4 (17-65)||(5681924-5681972)
chr4 (1-69)||(30231907-30231975)
chr4 (13-69)||(53907123-53907179)
chr4 (8-67)||(15012697-15012756)
chr4 (2-69)||(52264920-52264987)
chr4 (6-69)||(55375992-55376055)
chr4 (37-67)||(18277189-18277219)
chr4 (1-69)||(9290405-9290474)
chr4 (13-66)||(12836612-12836665)
chr4 (1-66)||(21958860-21958924)
chr4 (41-70)||(39467752-39467781)
chr4 (1-69)||(13808915-13808983)
chr4 (8-64)||(14902010-14902066)
chr4 (6-66)||(39121005-39121064)
chr4 (41-69)||(41165458-41165486)
[»] chr3 (51 HSPs)
chr3 (1-70)||(19260254-19260323)
chr3 (1-69)||(5240132-5240200)
chr3 (1-69)||(7854744-7854812)
chr3 (1-70)||(2050576-2050645)
chr3 (1-69)||(3578853-3578921)
chr3 (1-69)||(13818304-13818372)
chr3 (1-69)||(16181334-16181402)
chr3 (1-69)||(38528518-38528586)
chr3 (1-69)||(45582395-45582463)
chr3 (1-70)||(3993333-3993402)
chr3 (1-70)||(14527462-14527531)
chr3 (1-66)||(19232551-19232616)
chr3 (8-69)||(47784144-47784205)
chr3 (1-69)||(316895-316963)
chr3 (1-69)||(12348696-12348764)
chr3 (1-69)||(14304839-14304907)
chr3 (1-69)||(17955408-17955476)
chr3 (1-69)||(19570077-19570145)
chr3 (1-69)||(51960534-51960602)
chr3 (1-69)||(55440255-55440323)
chr3 (1-67)||(19947480-19947546)
chr3 (1-70)||(12029596-12029665)
chr3 (1-70)||(33342659-33342728)
chr3 (1-66)||(54037526-54037591)
chr3 (1-69)||(11328368-11328436)
chr3 (1-69)||(13839656-13839723)
chr3 (1-69)||(14296232-14296300)
chr3 (1-69)||(14301859-14301927)
chr3 (1-69)||(16995475-16995543)
chr3 (1-69)||(34438739-34438806)
chr3 (1-69)||(40939921-40939989)
chr3 (1-69)||(48422347-48422415)
chr3 (1-69)||(53897981-53898049)
chr3 (1-70)||(2844972-2845040)
chr3 (1-66)||(22143726-22143791)
chr3 (13-66)||(30153697-30153750)
chr3 (1-69)||(11060391-11060459)
chr3 (1-69)||(15856668-15856736)
chr3 (13-69)||(17102140-17102196)
chr3 (13-69)||(28558940-28558996)
chr3 (2-69)||(6153719-6153785)
chr3 (2-69)||(50111455-50111522)
chr3 (1-63)||(17586343-17586405)
chr3 (8-69)||(12487182-12487243)
chr3 (41-70)||(16743584-16743613)
chr3 (13-66)||(35124505-35124558)
chr3 (1-66)||(54424805-54424870)
chr3 (1-70)||(54684719-54684788)
chr3 (1-69)||(17522272-17522340)
chr3 (1-69)||(39657319-39657387)
chr3 (1-69)||(55193428-55193496)
[»] chr2 (33 HSPs)
chr2 (1-69)||(43642385-43642453)
chr2 (1-69)||(29023989-29024057)
chr2 (5-70)||(9652307-9652372)
chr2 (1-69)||(19794134-19794202)
chr2 (1-69)||(20626755-20626823)
chr2 (4-69)||(8891973-8892038)
chr2 (1-69)||(463483-463551)
chr2 (1-69)||(22863689-22863757)
chr2 (1-69)||(25602824-25602892)
chr2 (1-69)||(31145561-31145629)
chr2 (1-69)||(42535400-42535468)
chr2 (13-70)||(22762750-22762807)
chr2 (1-69)||(23836095-23836163)
chr2 (1-69)||(25875322-25875390)
chr2 (1-69)||(32466643-32466711)
chr2 (1-69)||(36890070-36890138)
chr2 (1-69)||(36981884-36981952)
chr2 (8-67)||(16446530-16446589)
chr2 (3-69)||(17367612-17367677)
chr2 (1-67)||(24086838-24086904)
chr2 (1-67)||(24885437-24885503)
chr2 (8-69)||(68775-68836)
chr2 (1-70)||(723163-723232)
chr2 (1-66)||(23805739-23805803)
chr2 (1-70)||(23821187-23821256)
chr2 (1-70)||(23830266-23830335)
chr2 (1-69)||(19433213-19433281)
chr2 (1-69)||(25264847-25264914)
chr2 (2-69)||(22579285-22579352)
chr2 (1-69)||(4447521-4447589)
chr2 (1-69)||(7322305-7322373)
chr2 (1-69)||(24293917-24293984)
chr2 (1-69)||(27262599-27262666)
[»] chr6 (22 HSPs)
chr6 (1-70)||(35014560-35014629)
chr6 (1-69)||(31628982-31629050)
chr6 (1-69)||(25633121-25633189)
chr6 (1-69)||(35008859-35008927)
chr6 (1-70)||(13620221-13620290)
chr6 (1-69)||(18571076-18571145)
chr6 (1-69)||(18584100-18584168)
chr6 (1-69)||(18777923-18777991)
chr6 (1-68)||(13014108-13014175)
chr6 (13-70)||(15863228-15863285)
chr6 (1-69)||(16086759-16086826)
chr6 (8-70)||(19982697-19982759)
chr6 (1-66)||(15079154-15079219)
chr6 (1-70)||(18001911-18001980)
chr6 (1-66)||(35135420-35135485)
chr6 (1-69)||(18399736-18399804)
chr6 (1-69)||(22441727-22441794)
chr6 (13-69)||(25743875-25743931)
chr6 (1-67)||(18433424-18433489)
chr6 (1-69)||(16107258-16107325)
chr6 (1-69)||(21410456-21410524)
chr6 (1-65)||(23148758-23148821)
[»] scaffold0816 (1 HSPs)
scaffold0816 (1-69)||(2452-2520)
[»] scaffold0597 (1 HSPs)
scaffold0597 (1-69)||(387-455)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-69)||(5350-5418)
scaffold0447 (1-69)||(9964-10032)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-69)||(7959-8027)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-69)||(2098-2166)
[»] scaffold0162 (3 HSPs)
scaffold0162 (1-69)||(12500-12568)
scaffold0162 (3-69)||(25848-25914)
scaffold0162 (13-69)||(7624-7680)
[»] chr1 (25 HSPs)
chr1 (1-69)||(20887233-20887301)
chr1 (1-70)||(20446442-20446511)
chr1 (6-70)||(20532211-20532275)
chr1 (1-69)||(35055542-35055610)
chr1 (1-66)||(13103915-13103980)
chr1 (1-70)||(15860881-15860950)
chr1 (1-69)||(16657438-16657506)
chr1 (1-69)||(20913786-20913854)
chr1 (1-69)||(20932101-20932169)
chr1 (1-69)||(35521730-35521798)
chr1 (1-70)||(21860793-21860862)
chr1 (1-69)||(21719025-21719093)
chr1 (4-66)||(37843889-37843951)
chr1 (1-63)||(44320413-44320475)
chr1 (1-66)||(44034386-44034451)
chr1 (3-67)||(4975096-4975160)
chr1 (1-69)||(20346786-20346854)
chr1 (1-69)||(41212812-41212879)
chr1 (1-67)||(22142748-22142813)
chr1 (36-69)||(41217073-41217106)
chr1 (8-69)||(51627075-51627136)
chr1 (41-69)||(17023761-17023789)
chr1 (41-69)||(20177935-20177963)
chr1 (1-69)||(22402495-22402562)
chr1 (13-69)||(27329174-27329230)
[»] chr8 (31 HSPs)
chr8 (1-67)||(25296936-25297002)
chr8 (1-67)||(25758956-25759022)
chr8 (1-69)||(24716266-24716334)
chr8 (1-70)||(43372904-43372973)
chr8 (1-69)||(37612459-37612527)
chr8 (1-67)||(23158954-23159019)
chr8 (1-66)||(20561014-20561079)
chr8 (1-66)||(20572576-20572641)
chr8 (1-70)||(24385165-24385234)
chr8 (1-66)||(41247449-41247514)
chr8 (1-66)||(41248079-41248144)
chr8 (1-69)||(16193269-16193337)
chr8 (1-69)||(16404418-16404486)
chr8 (1-69)||(20653417-20653485)
chr8 (1-69)||(22221738-22221806)
chr8 (1-69)||(22228080-22228148)
chr8 (7-69)||(9950535-9950597)
chr8 (1-70)||(275225-275294)
chr8 (1-70)||(640555-640624)
chr8 (1-70)||(826361-826430)
chr8 (1-66)||(25710492-25710557)
chr8 (1-69)||(22982065-22982133)
chr8 (1-67)||(23150576-23150641)
chr8 (13-66)||(6999736-6999789)
chr8 (13-66)||(19992473-19992526)
chr8 (1-66)||(24928235-24928300)
chr8 (5-66)||(29760737-29760798)
chr8 (1-65)||(21258924-21258988)
chr8 (41-69)||(23837994-23838022)
chr8 (1-69)||(25123231-25123298)
chr8 (1-69)||(39116059-39116126)
[»] chr5 (25 HSPs)
chr5 (3-69)||(32951451-32951517)
chr5 (1-69)||(24182520-24182588)
chr5 (1-69)||(27181980-27182048)
chr5 (4-69)||(4866028-4866093)
chr5 (1-69)||(1167619-1167687)
chr5 (1-69)||(28902991-28903059)
chr5 (1-69)||(28939386-28939454)
chr5 (1-67)||(23515321-23515387)
chr5 (1-63)||(28262242-28262304)
chr5 (2-66)||(19349811-19349875)
chr5 (7-69)||(11584838-11584900)
chr5 (1-67)||(37984142-37984208)
chr5 (8-69)||(7729225-7729286)
chr5 (3-68)||(23494685-23494750)
chr5 (1-69)||(433229-433297)
chr5 (1-69)||(21205699-21205766)
chr5 (1-69)||(21651472-21651540)
chr5 (5-65)||(23418022-23418082)
chr5 (1-67)||(22662094-22662160)
chr5 (1-70)||(20712869-20712937)
chr5 (8-69)||(23467237-23467298)
chr5 (19-67)||(16834756-16834804)
chr5 (41-69)||(21222071-21222099)
chr5 (1-69)||(21397883-21397950)
chr5 (42-70)||(35790564-35790592)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-70)||(5488-5557)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-70)||(192901-192970)
[»] scaffold1539 (1 HSPs)
scaffold1539 (5-69)||(329-393)
[»] scaffold0876 (1 HSPs)
scaffold0876 (3-67)||(557-621)
[»] scaffold0673 (2 HSPs)
scaffold0673 (1-69)||(6233-6301)
scaffold0673 (1-69)||(222-289)
[»] scaffold0310 (1 HSPs)
scaffold0310 (1-69)||(5806-5874)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-69)||(10954-11022)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-69)||(30877-30945)
[»] scaffold0068 (2 HSPs)
scaffold0068 (1-69)||(48916-48984)
scaffold0068 (1-69)||(62364-62432)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-69)||(16695-16763)
scaffold0021 (1-69)||(26226-26294)
scaffold0021 (1-69)||(131636-131704)
scaffold0021 (1-69)||(12848-12916)
[»] scaffold0218 (1 HSPs)
scaffold0218 (6-69)||(4589-4652)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-68)||(97608-97675)
scaffold0037 (1-69)||(24111-24179)
[»] scaffold0686 (1 HSPs)
scaffold0686 (1-70)||(5280-5349)
[»] scaffold0483 (2 HSPs)
scaffold0483 (1-66)||(299-364)
scaffold0483 (41-69)||(7451-7479)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-70)||(5545-5614)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-66)||(45086-45151)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-66)||(36511-36576)
scaffold0078 (1-66)||(42093-42158)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-70)||(107218-107287)
scaffold0028 (1-70)||(88906-88975)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-66)||(246879-246944)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-66)||(122598-122663)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-69)||(5075-5143)
[»] scaffold0537 (1 HSPs)
scaffold0537 (1-69)||(689-757)
[»] scaffold0498 (1 HSPs)
scaffold0498 (5-69)||(9645-9709)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-69)||(34449-34517)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-69)||(39095-39163)
[»] scaffold0035 (2 HSPs)
scaffold0035 (1-69)||(108850-108918)
scaffold0035 (1-69)||(117351-117419)
[»] scaffold0034 (2 HSPs)
scaffold0034 (1-69)||(41454-41522)
scaffold0034 (1-70)||(80637-80705)
[»] scaffold0008 (2 HSPs)
scaffold0008 (1-69)||(127609-127677)
scaffold0008 (1-67)||(35704-35770)
[»] scaffold0302 (1 HSPs)
scaffold0302 (3-70)||(12878-12945)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-70)||(11920-11987)
[»] scaffold0014 (2 HSPs)
scaffold0014 (3-66)||(86129-86192)
scaffold0014 (1-69)||(160094-160162)
[»] scaffold0480 (2 HSPs)
scaffold0480 (1-67)||(4646-4712)
scaffold0480 (1-69)||(8295-8362)
[»] scaffold0193 (1 HSPs)
scaffold0193 (13-67)||(5332-5386)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-67)||(63277-63343)
[»] scaffold0335 (1 HSPs)
scaffold0335 (13-70)||(6791-6848)
[»] scaffold0243 (1 HSPs)
scaffold0243 (4-69)||(1748-1813)
[»] scaffold0132 (1 HSPs)
scaffold0132 (1-66)||(43131-43196)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-69)||(50620-50686)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-70)||(165667-165736)
scaffold0016 (1-69)||(165004-165072)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-69)||(11094-11162)
[»] scaffold0183 (1 HSPs)
scaffold0183 (1-69)||(5076-5144)
[»] scaffold0160 (1 HSPs)
scaffold0160 (1-69)||(780-847)
[»] scaffold0083 (1 HSPs)
scaffold0083 (13-69)||(15638-15694)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-69)||(36352-36419)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-69)||(71408-71476)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-69)||(92452-92520)
scaffold0023 (13-70)||(280-337)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-69)||(79274-79341)
scaffold0001 (1-69)||(70009-70076)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-68)||(15424-15491)
[»] scaffold0598 (1 HSPs)
scaffold0598 (13-67)||(3969-4023)
[»] scaffold0706 (1 HSPs)
scaffold0706 (13-70)||(5971-6028)
[»] scaffold0190 (1 HSPs)
scaffold0190 (4-69)||(10734-10799)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-66)||(30686-30751)
[»] scaffold1979 (1 HSPs)
scaffold1979 (13-69)||(45-101)
[»] scaffold1867 (1 HSPs)
scaffold1867 (13-69)||(948-1004)
[»] scaffold1164 (1 HSPs)
scaffold1164 (1-69)||(2144-2212)
[»] scaffold0692 (1 HSPs)
scaffold0692 (1-69)||(4507-4574)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-69)||(13064-13132)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-69)||(9781-9849)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-69)||(3015-3083)
[»] scaffold0260 (1 HSPs)
scaffold0260 (1-69)||(9109-9177)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-69)||(22293-22360)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-69)||(102357-102425)
scaffold0022 (4-66)||(111932-111994)
[»] scaffold0122 (1 HSPs)
scaffold0122 (14-69)||(19354-19409)
[»] scaffold0049 (1 HSPs)
scaffold0049 (14-69)||(20965-21020)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-67)||(21798-21864)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-67)||(21812-21878)
[»] scaffold0032 (1 HSPs)
scaffold0032 (3-69)||(56360-56426)
[»] scaffold1272 (1 HSPs)
scaffold1272 (41-69)||(1068-1096)
[»] scaffold0610 (1 HSPs)
scaffold0610 (1-69)||(9495-9561)
[»] scaffold0561 (1 HSPs)
scaffold0561 (19-67)||(2379-2427)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-69)||(9444-9511)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-69)||(89272-89340)


Alignment Details
Target: scaffold0106 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 48871 - 48764
Alignment:
Q  133 cgggttgttacaccgcgcaaactcacaagaaagaaataaatgagacgaagtttcagcttgcttgtaacacagaccgcatatcgaaaccaatgtacaccca 232  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48871 cgggctgttacatcgcgcaaactcacaagaaagaaataaatgagacgaagtttcagcttgcttgtaacacagaccgcatatcgaaaccaatgtacaccca 48772  T
Q  233 cgcctttg 240  Q
    ||||||||    
T  48771 cgcctttg 48764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 49003 - 48934
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49003 acccctaagtctaaaatgactaaaatacccttcccacacaaaaacccatgaaaatgcacccaatgatgat 48934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19050070 - 19050138
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  19050070 acccctaagtctaaaatgactaaaatacccttcccacacgaaaacccatgaaaatgcacccaatgatga 19050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17816931 - 17816863
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  17816931 acccctaagtctaaaatgactaaaatacccttcccacacggaaacccatgaaaatgcacccaatgatga 17816863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 127197 - 127266
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  127197 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 127266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 144417 - 144485
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||| ||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  144417 acccctaagtccaaaacgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 144485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13036573 - 13036505
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  13036573 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 13036505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3060712 - 3060781
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||| ||||||||||||||||||||||||    
T  3060712 acccctaagtccaaaatgactaaaatacccttctaacacggaaactcatgaaaatgcacccaatgatgat 3060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12247572 - 12247504
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  12247572 acccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 12247504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12369294 - 12369226
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||| || |||||||||    
T  12369294 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgaactcaatgatga 12369226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13275551 - 13275619
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  13275551 acccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 13275619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26069069 - 26069001
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  |||| ||||||||||||||||||  |||||||||    
T  26069069 acccctaagtccaaaatgactaaaatacccttctaacacgaaaacccatgaaaatgcagtcaatgatga 26069001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26069727 - 26069659
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  |||| ||||||||||||||||||  |||||||||    
T  26069727 acccctaagtccaaaatgactaaaatacccttctaacacgaaaacccatgaaaatgcagtcaatgatga 26069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26093514 - 26093446
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  |||| ||||||||||||||||||  |||||||||    
T  26093514 acccctaagtccaaaatgactaaaatacccttctaacacgaaaacccatgaaaatgcagtcaatgatga 26093446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45451630 - 45451562
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| |||||||||||||||||||||| ||||  ||||  ||| ||||||||||||||||||||||||    
T  45451630 acccccaagtctaaaatgactaaaatacccttctaacacggaaatccatgaaaatgcacccaatgatga 45451562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7293760 - 7293829
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||| ||| | |||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  7293760 acccctatgtccagaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 7293829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 14419690 - 14419625
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||| |||||||||    
T  14419690 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgaacccaatga 14419625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 34240668 - 34240607
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||||| ||| ||||  |||| ||||||||| |||||||||||||||||||    
T  34240668 agtctaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaatgatga 34240607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13321781 - 13321849
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||||||| ||||  ||| | |||| |||||||||||||||||||||||    
T  13321781 acccttaagtccaaaatgactaaaatacccttctaacatagaaactcatgaaaatgcacccaatgatga 13321849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 32493531 - 32493475
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||| ||||  |||| ||||| |||||||||||||||||||||||    
T  32493531 aaaatgactaaaatacccttctaacacgaaaactcatgaaaatgcacccaatgatga 32493475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7283528 - 7283463
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||| ||||||||||| ||||  | ||  ||||||||||||||||||||||||||    
T  7283528 acccctaagtctaaaa-gactaaaatacccttctaatacggaaacccatgaaaatgcacccaatgat 7283463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31501942 - 31502004
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaa 63  Q
    |||||| ||||||||||||||||| ||| ||||  |||| ||||||||| |||||||||||||    
T  31501942 acccctgagtctaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaa 31502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 49047146 - 49047080
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||| |||||| ||||| ||| ||||  ||||| ||||||||||||||||||||||||||||    
T  49047146 ccctgagtccaaaatggctaaattacccttctaacacagaaacccatgaaaatgcacccaatgatga 49047080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1936492 - 1936424
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||| ||||| ||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  1936492 acccttaagtttaaaa-gactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 1936424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2029701 - 2029770
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||| |||||||||||||||| ||||  ||    |||||||||||||||||||||||||||||    
T  2029701 acccttaagtcgaaaatgactaaaatacccttctaacttggaaacccatgaaaatgcacccaatgatgat 2029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 12116288 - 12116345
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||| |||||||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  12116288 aaaattactaaaatacccttctaatacaaaaaccgatgaaaatgcacccaatgatgat 12116345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44866011 - 44866075
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||||||| ||||  ||||  |||| ||||||||| ||||||||||    
T  44866011 acccctaagtctaaaatgactaaaatacccttctaacac-gaaactcatgaaaatacacccaatga 44866075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 11288212 - 11288280
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| || |||||||||||  ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  11288212 acccctaaatccaaaatgactaagttacccttctaacacggaaacccatgaaaatgcacccaatgatga 11288280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12759775 - 12759843
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||||||  |||  ||||   || ||||||||||||||||||||||||    
T  12759775 acccctaagtccaaaatgactaaaataccattctaacacgggaatccatgaaaatgcacccaatgatga 12759843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 3895794 - 3895849
Alignment:
Q  14 aaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||||||| ||||| ||||   |||||||||||||||||||||||||||    
T  3895794 aaatgaccaaaatacccttccaacacggtaacccatgaaaatgcacccaatgatga 3895849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 4439542 - 4439596
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||| ||||||| ||| || ||| ||||||||| |||||||||||||||||    
T  4439542 aaaatgaccaaaatacccttaccgcactaaaacccataaaaatgcacccaatgat 4439596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 4446971 - 4447025
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||| ||||||| ||| || ||| ||||||||| |||||||||||||||||    
T  4446971 aaaatgaccaaaatacccttaccgcactaaaacccataaaaatgcacccaatgat 4447025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 10332016 - 10331962
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||| |||||| ||| || || ||||||||||||||||||| ||||||||||||    
T  10332016 aaaattactaaattaccctcccaacacaaaaacccatgaaaacgcacccaatgat 10331962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 14268364 - 14268310
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||| ||||||| ||||  |||| ||||||||||||||| |||||||||||    
T  14268364 aaaatgaccaaaatacccttctaacacgaaaacccatgaaaatacacccaatgat 14268310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 13378287 - 13378316
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||||||||||    
T  13378287 aaaacccatgaaaatgcacccaatgatgat 13378316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 13862392 - 13862339
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||| || ||||||    
T  13862392 aaaatgactaaaatacccttccaacacggaaacccatgaaaatgtacacaatga 13862339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35095601 - 35095666
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| || |  |||   ||| |||||||||||||||||||||    
T  35095601 acccctaagtccaaaatgactaaaataccctcctaacaaggaaatccatgaaaatgcacccaatga 35095666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 36053432 - 36053485
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||   |||  |||||||||||||||||||||||||    
T  36053432 aaaatgactaaaatacccttctatcacggaaacccatgaaaatgcacccaatga 36053485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 37941548 - 37941577
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||||||||||    
T  37941548 aaaacccatgaaaatgcacccaatgatgat 37941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 110740 - 110673
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||| ||||||||||| |||   | ||  ||||||||||||||||||||||||||||    
T  110740 acccctaagtccaaaa-gactaaaatacccttttaatacggaaacccatgaaaatgcacccaatgatga 110673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16212532 - 16212599
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||||||||||||||  |||  ||||  ||| ||||||||||||||| ||||||||    
T  16212532 acccttaagtctaaaatgactaaaataccattctaacacggaaa-ccatgaaaatgcacctaatgatga 16212599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 16569447 - 16569391
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||| ||| ||||  |||| |||||||||||||||| ||| ||||||||    
T  16569447 aaaatgactaaattacccttctaacacgaaaacccatgaaaatgtacctaatgatga 16569391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 16596215 - 16596271
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||| ||| ||||  |||| |||||||||||||||| ||| ||||||||    
T  16596215 aaaatgactaaattacccttctaacacgaaaacccatgaaaatgtacctaatgatga 16596271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 45150326 - 45150374
Alignment:
Q  19 actaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| ||| ||||| |||| ||||||||| |||||||||||||||||    
T  45150326 actaaattacccttccaacacgaaaacccattaaaatgcacccaatgat 45150374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 122655 - 122723
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  122655 acccctaagtctaaaatgactaaaataccctttccacacgaaaacccatgaaaatgcacccaatgatga 122723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25118657 - 25118588
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  25118657 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 25118588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13722550 - 13722482
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  13722550 acccctaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatgatga 13722482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16732966 - 16733034
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  16732966 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 16733034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8871926 - 8871858
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  |||||||||||||||||| |||||||||    
T  8871926 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcactcaatgatga 8871858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 53704207 - 53704139
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  |||||||||| |||||||||||||||||    
T  53704207 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgagaatgcacccaatgatga 53704139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54117741 - 54117676
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||||||| ||||  ||||  |||||||||||||||||| ||||||    
T  54117741 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcactcaatga 54117676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23269387 - 23269319
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| || |||||||||||| ||| ||||  ||||| ||||||||||||||||||||||||||||    
T  23269387 acccctaaatccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatga 23269319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34396052 - 34396117
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| |||   |||| |||||||||||||||||||| |||||    
T  34396052 acccctaagtccaaaatgactaaaatacccttttaacacgaaaacccatgaaaatgcaccaaatga 34396117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 15045603 - 15045671
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  15045603 acccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 15045671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15108821 - 15108753
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  15108821 acccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 15108753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 18292996 - 18292928
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||| ||||| ||||  |||   ||||||||||||||||||||||||||||    
T  18292996 acccttaagtctaaaatgactataatacccttctaacaaggaaacccatgaaaatgcacccaatgatga 18292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20813001 - 20812933
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| | |||||||||||||| |||   ||||| ||||||| ||||||||||||||||||||    
T  20813001 acccctaagtccataatgactaaaatacccttttaacacagaaacccacgaaaatgcacccaatgatga 20812933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44056710 - 44056777
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||| ||||||||||||||||||||||||    
T  44056710 acccctaagtccaaaatgactaaaatacccttctaacacggaaa-ccatgaaaatgcacccaatgatga 44056777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 44347620 - 44347684
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| |||||||||||||||| ||||| ||||  |||| ||||||||||||| |||||||||    
T  44347620 ctaagtccaaaatgactaaaatacccttccaacacggaaacacatgaaaatgcactcaatgatga 44347684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9296276 - 9296345
Alignment:
Q  1 acccctaagtctaaaa-tgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||| |||||||||||| ||||  ||||  ||||||||||||||||||||||| ||||    
T  9296276 acccttaagtctaaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaataatga 9296345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 13247219 - 13247272
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  13247219 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 13247272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45458318 - 45458253
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||| ||||||||||||||||| ||||  ||||| |||| || |||||||||| ||||||    
T  45458318 acccctaagtttaaaatgactaaaatacccttctaacacagaaactcacgaaaatgcacgcaatga 45458253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 5681972 - 5681924
Alignment:
Q  17 tgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatg 65  Q
    |||||||||||| ||||  ||||| ||||||||||||||||||||||||    
T  5681972 tgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatg 5681924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30231975 - 30231907
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||| ||  ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  30231975 acccctaagtccaaaatgaccaatttacccttctaacacgcaaacccatgaaaatgcacccaatgatga 30231907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 53907179 - 53907123
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||| ||||  ||||| ||||||||| ||||||||||||||||||    
T  53907179 aaaatgaccaaaatacccttctaacacagaaacccatggaaatgcacccaatgatga 53907123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 15012756 - 15012697
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||||||||| ||| ||||  | || |||| ||||||||||||||||||||||    
T  15012756 agtctaaaatgactaaattacccttctaatacgaaaatccatgaaaatgcacccaatgat 15012697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 52264987 - 52264920
Alignment:
Q  2 cccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| |||||||||||| ||| ||||  ||||  |||||||| ||||||||| |||||||||    
T  52264987 cccctaagtccaaaatgactaaattacccttctaacacggaaacccataaaaatgcactcaatgatga 52264920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 55376055 - 55375992
Alignment:
Q  6 taagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| ||||||| ||||||||  |||  ||||  ||||||||||||||||||||||||||||    
T  55376055 taagtccaaaatgattaaaataccattctaacacggaaacccatgaaaatgcacccaatgatga 55375992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 18277189 - 18277219
Alignment:
Q  37 cacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||||||||||||||    
T  18277189 cacaaaaacccatgaaaatgcacccaatgat 18277219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9290405 - 9290474
Alignment:
Q  1 acccctaagtctaaaa-tgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||| ||||||||||||  |||  ||||  ||||||||||||||||||||||| ||||    
T  9290405 acccttaagtctaaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaataatga 9290474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 12836665 - 12836612
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||| ||||||    
T  12836665 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcactcaatga 12836612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21958924 - 21958860
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||||||| ||||  ||||   ||| ||||||||||||| ||||||    
T  21958924 acccctaagtctaaaatgactaaaatacccttctaacac-ggaactcatgaaaatgcacacaatga 21958860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 39467752 - 39467781
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||||||||||    
T  39467752 aaaacccatgaaaatgcacccaatgatgat 39467781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 13808983 - 13808915
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||| ||| |||   ||||  |||||||||||||| |||||||||||||    
T  13808983 acccataagtccaaaatgactaaattacccttataacacggaaacccatgaaaatacacccaatgatga 13808915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 14902010 - 14902066
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaat 64  Q
    |||| |||||||||||| ||| ||||  |||| |||||||||||||||||| |||||    
T  14902010 agtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcatccaat 14902066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 39121064 - 39121005
Alignment:
Q  6 taagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||| |||||||| ||||  ||||  ||||| |||||||||||||||||||    
T  39121064 taagtctaaaatgattaaaatacccttctaacacggaaacc-atgaaaatgcacccaatga 39121005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 41165486 - 41165458
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  41165486 aaaacccatgaaaatgcacccaatgatga 41165458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19260323 - 19260254
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||    
T  19260323 acccctaagtctaaaatgactaaaataccattcccacacggaaacccatgaaaatgcacccaatgatgat 19260254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5240200 - 5240132
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| ||||||||||||||||| ||||||||||  |||| |||||||||||||||||||||||    
T  5240200 acccctaagtttaaaatgactaaaatacccttcccacacggaaactcatgaaaatgcacccaatgatga 5240132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7854744 - 7854812
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  7854744 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 7854812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2050576 - 2050645
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  2050576 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 2050645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3578853 - 3578921
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||||    
T  3578853 acccctaagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaatgatga 3578921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13818304 - 13818372
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| ||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  13818304 accccaaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 13818372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16181402 - 16181334
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  16181402 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 16181334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38528518 - 38528586
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||    
T  38528518 acccttaagtccaaaatgactaaaatacccttctaacacgaaaacccatgaaaatgcacccaatgatga 38528586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45582395 - 45582463
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| |||   ||||  ||||||||||||||||||||||||||||    
T  45582395 acccctaagtctaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatgatga 45582463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 3993333 - 3993402
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||| ||||||||||    
T  3993333 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacacaatgatgat 3993402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14527531 - 14527462
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||| |||||||||||  ||| ||||  |||| ||||||||||||||||||||||||||||||    
T  14527531 acccctaagtccaaaatgactaatttacccttctaacacgaaaacccatgaaaatgcacccaatgatgat 14527462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19232551 - 19232616
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  19232551 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 19232616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 47784205 - 47784144
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||||    
T  47784205 agtctaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaatgatga 47784144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 316963 - 316895
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| |||   ||||  ||||||||||||||||||||||||||||    
T  316963 acccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatgatga 316895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12348764 - 12348696
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  12348764 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatga 12348696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14304839 - 14304907
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  14304839 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatga 14304907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17955476 - 17955408
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||| |||||||||||||| ||| |||||||||    
T  17955476 acccctaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatacactcaatgatga 17955408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19570145 - 19570077
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||  ||| | ||||  ||||||||||||||||||||||||||||    
T  19570145 acccctaagtccaaaatgactaaaataacctttcaacacggaaacccatgaaaatgcacccaatgatga 19570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51960602 - 51960534
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||  ||||  ||||  ||||||||||||||||||||||||||||    
T  51960602 acccttaagtctaaaatgactaaaatatccttctaacacggaaacccatgaaaatgcacccaatgatga 51960534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55440323 - 55440255
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||||||||||||    
T  55440323 acccttaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatga 55440255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19947480 - 19947546
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||||||| |||||||||||| ||||  ||||  ||||||||||||||||| ||||||||    
T  19947480 acccctaagtctaaattgactaaaatactcttctaacacggaaacccatgaaaatgcatccaatgat 19947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12029665 - 12029596
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||||||||||| |||||||| |||   ||||  |||||||||||||||||||||||||||||    
T  12029665 acccttaagtctaaaatgattaaaatacccttataacacggaaacccatgaaaatgcacccaatgatgat 12029596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33342659 - 33342728
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||| ||||||||||| ||||  ||||  |||| ||||||||||||||||||||||||    
T  33342659 acccttaagtctaaaacgactaaaatacccttctaacacggaaactcatgaaaatgcacccaatgatgat 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 54037591 - 54037526
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| ||| ||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  54037591 acccttaaatctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 54037526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11328436 - 11328368
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  |||| |||||||||||||||||| ||||||||||    
T  11328436 acccctgagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcaaccaatgatga 11328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13839656 - 13839723
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||| ||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  13839656 acccttaagtctaaaa-gactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 13839723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14296232 - 14296300
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||| ||||||||||||  || ||||  |||| |||||||||||||||||||||||||||||    
T  14296232 acccctatgtccaaaatgactaaatcacccttctaacacgaaaacccatgaaaatgcacccaatgatga 14296300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14301859 - 14301927
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||| ||||||||||||  || ||||  |||| |||||||||||||||||||||||||||||    
T  14301859 acccctatgtccaaaatgactaaatcacccttctaacacgaaaacccatgaaaatgcacccaatgatga 14301927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16995543 - 16995475
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||| |||||||||||||||| ||||  ||||  ||||| ||||||||||||||||||||||    
T  16995543 acccctacgtccaaaatgactaaaatacccttctaacacggaaacctatgaaaatgcacccaatgatga 16995475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34438806 - 34438739
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||| |||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||||||    
T  34438806 acccctacgtccaaaatgactaaaatacccttctgacacagaaacc-atgaaaatgcacccaatgatga 34438739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 40939921 - 40939989
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||| ||| ||| | ||||  ||||||||||||||||||||||||||||    
T  40939921 acccttaagtccaaaatgactaaattacccttacaacacggaaacccatgaaaatgcacccaatgatga 40939989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48422347 - 48422415
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  ||||| |||||||||||||||||| |||||||||    
T  48422347 acccctgagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcactcaatgatga 48422415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 53898049 - 53897981
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||| |||||||||||||||||  ||||  |||| |||| ||||||||||||||| ||||||||    
T  53898049 acccctaagcctaaaatgactaaaatatccttctaacacgaaaatccatgaaaatgcaccaaatgatga 53897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2844972 - 2845040
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||| ||||||||||| ||||  ||||  ||||||||||||||||||| |||||||||    
T  2844972 acccttaagtctaaaa-gactaaaatacccttctaacacggaaacccatgaaaatgcaccaaatgatgat 2845040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22143791 - 22143726
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||   |||  ||| |||||||||||||||||||||    
T  22143791 acccctaagtccaaaatgactaaaatacccttctatcacggaaatccatgaaaatgcacccaatga 22143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 30153697 - 30153750
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  30153697 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 30153750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11060459 - 11060391
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||| ||| ||||  || | ||||||||||||||| |||||||||||||    
T  11060459 acccttaagtccaaaatgactaaattactcttctaacgcgaaaacccatgaaaatacacccaatgatga 11060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15856736 - 15856668
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| || |  |||   |||||||||||||||||||||| |||||    
T  15856736 acccctaagtccaaaatgactaaaataccctcctaacatggaaacccatgaaaatgcacccaaagatga 15856668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 17102140 - 17102196
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||| ||||  ||||  |||||||| |||||||||||||||||||    
T  17102140 aaaatgactaaaatacccttctaacacggaaacccattaaaatgcacccaatgatga 17102196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 28558940 - 28558996
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  28558940 aaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 28558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 6153785 - 6153719
Alignment:
Q  2 cccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| |||||||||||||||| ||||  ||||  ||| ||||||||||| ||||||||||||    
T  6153785 cccctaagtccaaaatgactaaaatacccttctaacacggaaa-ccatgaaaatgtacccaatgatga 6153719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 50111522 - 50111455
Alignment:
Q  2 cccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| || ||||||||||||||||  |||  || |  ||||||||||||||||||||||||||||    
T  50111522 cccctaaatccaaaatgactaaaataccattctaactcgtaaacccatgaaaatgcacccaatgatga 50111455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17586405 - 17586343
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaa 63  Q
    |||||| |||| |||||||||||| ||| ||||  |||| ||||||||| |||||||||||||    
T  17586405 acccctgagtccaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaa 17586343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 12487243 - 12487182
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||| ||| ||||  ||||  |||||||||||||| |||||||||||||    
T  12487243 agtccaaaatgactaaattacccttcaaacacggaaacccatgaaaattcacccaatgatga 12487182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 16743613 - 16743584
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||||||||||    
T  16743613 aaaacccatgaaaatgcacccaatgatgat 16743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 35124505 - 35124558
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||  ||||  ||||||| |||||||||||||||||    
T  35124505 aaaatgactaaaatacccttctaacacggaaacccacgaaaatgcacccaatga 35124558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 54424805 - 54424870
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| |||||| |||||||||||||||| ||||  ||||  |||||||  ||||||||||||||||    
T  54424805 acccttaagtccaaaatgactaaaatacccttctaacacggaaacccacaaaaatgcacccaatga 54424870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 54684788 - 54684719
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||| ||||||||||| |||   ||||  |||| ||||||||||||||||| ||||||    
T  54684788 acccttaagtctaaaacgactaaaatacccttataacacggaaactcatgaaaatgcacccaacgatgat 54684719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17522340 - 17522272
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| || |||||||||||| ||| ||||  ||||  ||| ||||||||| ||||||||||||||    
T  17522340 acccctaaatccaaaatgactaaagtacccttctaacacggaaatccatgaaaaggcacccaatgatga 17522272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39657319 - 39657387
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| | ||  ||||  ||| ||||||||||||||||||||||||    
T  39657319 acccctgagtccaaaatgactaaattacccctctaacacggaaatccatgaaaatgcacccaatgatga 39657387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 55193428 - 55193496
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| | | | ||  |||| |||||||||||| ||||| ||||||||||    
T  55193428 acccctaagtccaaaatgactaaatttcccctctaacacgaaaacccatgaatatgcatccaatgatga 55193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43642453 - 43642385
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  43642453 acccctaagtctaaaatgactaaaatacccttctaacacataaacccatgaaaatgcacccaatgatga 43642385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29023989 - 29024057
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||| ||| ||||  ||||||||||| ||||||||||||||||||||||    
T  29023989 acccctaagtctaaaatgactaaattacccttctaacacaaaaacctatgaaaatgcacccaatgatga 29024057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 9652372 - 9652307
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  9652372 ctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 9652307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19794202 - 19794134
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  19794202 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 19794134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20626823 - 20626755
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||| ||||  |||| |||||||||||||||||| ||||||||||    
T  20626823 acccttaagtctaaaatgactaaaatacccttctaacaccaaaacccatgaaaatgcatccaatgatga 20626755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 8891973 - 8892038
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||| ||||||||| ||||  |||| |||||| ||||||||||||||||||||||    
T  8891973 cctaagtctaaaatggctaaaatacccttctaacacgaaaacctatgaaaatgcacccaatgatga 8892038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 463483 - 463551
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||| ||||  ||||  |||||||||||| |||||||||||||||    
T  463483 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaattgcacccaatgatga 463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22863689 - 22863757
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||| ||||| ||||  ||||  ||||||| ||||||||||||||||||||    
T  22863689 acccctaagtctaaaatgactacaatacccttctaacacggaaacccacgaaaatgcacccaatgatga 22863757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25602824 - 25602892
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||| ||||||||||||||| ||||  ||||   |||||||||||||||||||||||||||    
T  25602824 acccctaagtcttaaatgactaaaatacccttctaacacgggaacccatgaaaatgcacccaatgatga 25602892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31145629 - 31145561
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  |||| |||||||||||||||||||| ||||||||    
T  31145629 acccctaagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcaccaaatgatga 31145561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42535400 - 42535468
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||| |||||||||    
T  42535400 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcactcaatgatga 42535468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 22762807 - 22762750
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||| ||| ||||  |||| ||||||||||||||||||||||||||||||    
T  22762807 aaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaatgatgat 22762750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23836163 - 23836095
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||| || ||||  ||||  ||||||||||||||||| ||||||||||    
T  23836163 acccctaagtccaaaatgactaaaacacccttctaacacgtaaacccatgaaaatgcatccaatgatga 23836095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25875390 - 25875322
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||| ||||||||||||||||| |||||    
T  25875390 acccctaagtccaaaatgactaaaatacccttctaacacggaaactcatgaaaatgcacccaacgatga 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32466643 - 32466711
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||| ||||  ||||  ||||| |||||||||||||| |||||||    
T  32466643 acccataagtctaaaatgactaaaatacccttctaacacggaaacctatgaaaatgcaccccatgatga 32466711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36890138 - 36890070
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||  |||   ||||||||||||||||||||||||||||    
T  36890138 acccctaagttcaaaatgactaaaatacccttctaacatggaaacccatgaaaatgcacccaatgatga 36890070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36981952 - 36981884
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||||||||||||||||  |||  ||||  |||||| |||||||||| ||||||||||    
T  36981952 acccctaagtctaaaatgactaaaataccattctaacacggaaacccgtgaaaatgcatccaatgatga 36981884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 16446530 - 16446589
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||||||||| ||| ||||  |||| ||||||||||||||||||| |||||||    
T  16446530 agtctaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacacaatgat 16446589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 17367612 - 17367677
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||| ||||  ||||  ||| ||||||||||| ||||||||||||    
T  17367612 ccctaagtctaaaatgactaaaatacacttctaacacggaaa-ccatgaaaatgtacccaatgatga 17367677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24086904 - 24086838
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| |||| |||||||||||| ||| ||||  | || |||||||||||||||||||||||||||    
T  24086904 acccctgagtccaaaatgactaaattacccttctaatacgaaaacccatgaaaatgcacccaatgat 24086838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24885437 - 24885503
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| |||| |||||||||||| ||| ||||  |||| ||||||||| |||||||||||||||||    
T  24885437 acccctgagtccaaaatgactaaattacccttctaacacgaaaacccattaaaatgcacccaatgat 24885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 68775 - 68836
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||| |||  |||  ||||| ||||||||||||||||||||||||||||    
T  68775 agtccaaaatgactaaattaccattctaacacagaaacccatgaaaatgcacccaatgatga 68836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 723163 - 723232
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  |||||||||||||||||| ||||||||||    
T  723163 acccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcactcaatgatgat 723232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 23805803 - 23805739
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||| ||||||||| | ||||  |||| ||||||||| ||||||||||||||||    
T  23805803 acccctaagtctaaaa-gactaaaatgcccttctaacacgaaaacccataaaaatgcacccaatga 23805739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23821256 - 23821187
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  || ||||||||||||||||||||||||||    
T  23821256 acccctgagtccaaaatgactaaattacccttctaacacggaatcccatgaaaatgcacccaatgatgat 23821187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23830335 - 23830266
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  || ||||||||||||||||||||||||||    
T  23830335 acccctgagtccaaaatgactaaattacccttctaacacggaatcccatgaaaatgcacccaatgatgat 23830266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19433281 - 19433213
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  19433281 acccctgagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcatccaatgatga 19433213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25264914 - 25264847
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  |||| |||| | |||  |||||||||||||||||    
T  25264914 acccctaagtctaaaatgactaaaatacccttctaacacgaaaatctatg-taatgcacccaatgatga 25264847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 22579352 - 22579285
Alignment:
Q  2 cccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| |||||||| ||| ||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  22579352 cccctaagtccaaaatgaccaaattacccttctaacacggaaacccatgaaaatgcatccaatgatga 22579285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4447589 - 4447521
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||||||||  | ||  ||||| ||||||||||| | ||||||||    
T  4447589 acccctaagttcaaaatgactaaaatacgcttctaatacggaaacctatgaaaatgcatcaaatgatga 4447521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7322305 - 7322373
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| |||  ||   || || ||||||||||||||||||||||||||||    
T  7322305 acccctgagtccaaaatgactaaattaccattttaactcagaaacccatgaaaatgcacccaatgatga 7322373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24293984 - 24293917
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  ||||  || |||||||||||||||||||||||||    
T  24293984 acccctgagtccaaaatgactaaattacccttctaacacggaa-cccatgaaaatgcacccaatgatga 24293917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27262599 - 27262666
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||||||  |||  ||||  ||||||| | ||||||||||||||||||    
T  27262599 acccctaagtccaaaatgactaaaataccattctaacacggaaacccacg-aaatgcacccaatgatga 27262666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35014629 - 35014560
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||    
T  35014629 acccataagtctaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatgatgat 35014560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31628982 - 31629050
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||| | ||||  ||||||||||||||||||||||||||||    
T  31628982 acccctaagtctaaaatgactaaaataccctttcaacacggaaacccatgaaaatgcacccaatgatga 31629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25633189 - 25633121
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  25633189 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 25633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35008927 - 35008859
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  35008927 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 35008859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13620290 - 13620221
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||||||| |||   ||||  ||||||||||||||| |||||||||||||    
T  13620290 acccctaagtctaaaatgactaaaatacccttttaacacggaaacccatgaaaatgtacccaatgatgat 13620221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18571076 - 18571145
Alignment:
Q  1 acccctaagtctaaaatgactaaaa-tacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||| ||| ||||| ||||  ||||||||||||||||||||||||||||    
T  18571076 acccctaagtccaaaatgactaaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 18571145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18584100 - 18584168
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||   |||||||||||||||||||||||||||    
T  18584100 acccctaagtccaaaatgactaaaatacccttctaacacgggaacccatgaaaatgcacccaatgatga 18584168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18777923 - 18777991
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||| ||||  ||| ||||||||||||||||||||||||    
T  18777923 acccctaagttcaaaatgactaaaatacccttccaacacggaaatccatgaaaatgcacccaatgatga 18777991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13014175 - 13014108
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatg 68  Q
    ||||||||||| |||||||||||||||| ||||  |||   |||||||||||||||||||||||||||    
T  13014175 acccctaagtccaaaatgactaaaatacccttctaacatggaaacccatgaaaatgcacccaatgatg 13014108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 15863228 - 15863285
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  15863228 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 15863285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16086759 - 16086826
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| | ||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  16086759 acccctaagt-tcaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 16086826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 19982759 - 19982697
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||| ||||||||||| ||||  ||||  |||||||||||||||||| ||||||||||    
T  19982759 agtctaaaacgactaaaatacccttctaacacggaaacccatgaaaatgcactcaatgatgat 19982697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15079219 - 15079154
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||| ||| |||||||||||| ||| ||||  ||||  |||||||||||||||||||||||||    
T  15079219 acccctacgtccaaaatgactaaattacccttcaaacacggaaacccatgaaaatgcacccaatga 15079154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18001980 - 18001911
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||| |||||||||||||||||||||| ||||  ||||  ||| ||||||||||| | |||||||||||    
T  18001980 acccccaagtctaaaatgactaaaatacccttctaacacggaaatccatgaaaatgtatccaatgatgat 18001911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35135485 - 35135420
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||| || |||||||||| | ||| ||||  |||| ||||||||||||||||||||||||||    
T  35135485 acccctaattccaaaatgactatattacccttctaacacgaaaacccatgaaaatgcacccaatga 35135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18399736 - 18399804
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||| ||||||||| | |||||||||    
T  18399736 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccgtgaaaatgctctcaatgatga 18399804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22441727 - 22441794
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||| ||||| ||||||||||||||||||    
T  22441727 acccctaagtccaaaatgactaaaatacccttctaacacggaaatccatg-aaatgcacccaatgatga 22441794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 25743931 - 25743875
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||| ||||  | ||  ||||||||||||||||||||||||||||    
T  25743931 aaaatgactaaaatacccttctaatacggaaacccatgaaaatgcacccaatgatga 25743875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18433424 - 18433489
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||| |||||| |||||||||||||||    
T  18433424 acccctaagtccaaaatgactaaaatacccttctaacacggaaa-ccatgagaatgcacccaatgat 18433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16107258 - 16107325
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| | |||||| |||||||| ||||  ||||  ||||||||||||||||||| ||||||||    
T  16107258 acccctaagt-tcaaatgattaaaatactcttctaacacgtaaacccatgaaaatgcaccaaatgatga 16107325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21410524 - 21410456
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||  ||||  ||||  |||||||| |||||||||||||||||||    
T  21410524 acccctgagtccaaaatgactaaattatccttctaacacggaaacccataaaaatgcacccaatgatga 21410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23148758 - 23148821
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatg 65  Q
    |||||||| ||||||||||||||||||| ||||  ||||   ||||||||||| |||||||||||    
T  23148758 acccctaaatctaaaatgactaaaatacccttctaacac-ggaacccatgaaagtgcacccaatg 23148821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0816 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0816
Description:

Target: scaffold0816; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2520 - 2452
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  2520 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 2452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 455 - 387
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||||||||  |||||||||||||| |||||||||||||    
T  455 acccctaagtccaaaatgactaaaatacccttcccacacggaaacccatgaaaatacacccaatgatga 387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5350 - 5418
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  5350 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9964 - 10032
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  9964 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 10032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7959 - 8027
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  7959 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 8027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2098 - 2166
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||    
T  2098 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgatga 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12500 - 12568
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  12500 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 12568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25914 - 25848
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||| ||||  ||||  ||| ||||||||||||||| ||||||||    
T  25914 ccctaagtctaaaatgactaaaatacccttctaacacggaaatccatgaaaatgcaccaaatgatga 25848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 7680 - 7624
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  7680 aaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 7624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20887301 - 20887233
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  20887301 acccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 20887233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20446442 - 20446511
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  20446442 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 20446511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 20532211 - 20532275
Alignment:
Q  6 taagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  20532211 taagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 20532275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35055542 - 35055610
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||    
T  35055542 acccataagtccaaaatgactaaaatacccttccaacacgaaaacccatgaaaatacacccaatgatga 35055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13103915 - 13103980
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||||||||||||||||||||  |||  ||||  |||||||||||||||||||||||||    
T  13103915 acccctaagtctaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaatga 13103980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15860950 - 15860881
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||  |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  15860950 acccctaagttcaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 15860881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16657438 - 16657506
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||| ||||||||||||    
T  16657438 acccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatga 16657506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20913786 - 20913854
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||| ||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  20913786 acccttaagtttaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 20913854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20932101 - 20932169
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||| ||||||||    
T  20932101 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcaccaaatgatga 20932169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35521798 - 35521730
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||||||  |||  ||||  ||||||||||||||||||||||||||||    
T  35521798 acccctaagtccaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaatgatga 35521730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21860793 - 21860862
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||  ||||  ||||  ||||||||||||||||||| |||||||||    
T  21860793 acccttaagtctaaaatgactaaaataaccttctaacacggaaacccatgaaaatgcaccaaatgatgat 21860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21719025 - 21719093
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| ||||| ||||||||||||||||  |||  ||||  ||||||||||||||||||||||||||||    
T  21719025 acccccaagtccaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaatgatga 21719093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 37843951 - 37843889
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||||||||||||||||| ||||  || |  ||||||||||||||||| |||||||    
T  37843951 cctaagtctaaaatgactaaaatactcttctaacccggaaacccatgaaaatgcatccaatga 37843889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44320413 - 44320475
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaa 63  Q
    ||||||||||  |||||||||||||||| ||||  ||||  ||||||||||||||||||||||    
T  44320413 acccctaagttcaaaatgactaaaatactcttctaacacggaaacccatgaaaatgcacccaa 44320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 44034451 - 44034386
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| |||||| |||||||||||||||| ||||   |||  |||||||||||||||||||||||||    
T  44034451 acccttaagtccaaaatgactaaaatactcttctagcacgtaaacccatgaaaatgcacccaatga 44034386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 4975096 - 4975160
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||| |||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||    
T  4975096 ccctgagtccaaaatgactaaattacacttctaacacggaaacccatgaaaatgcacccaatgat 4975160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20346786 - 20346854
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||||||  |||  |||   |||||||||||||| |||||||||||||    
T  20346786 acccctaagtccaaaatgactaaaataccattctaacatggaaacccatgaaaatacacccaatgatga 20346854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41212812 - 41212879
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| ||||||||||||||||| ||||  ||||   |||||||||||||||| ||||||||||    
T  41212812 acccctaagtttaaaatgactaaaatacccttctaacac-ggaacccatgaaaatgcatccaatgatga 41212879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22142813 - 22142748
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||| ||| ||| ||||  |||| ||||||||| |||||||||| ||||||    
T  22142813 acccctaagtctaaaatgaccaaattacccttctaacacgaaaacccat-aaaatgcacctaatgat 22142748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 41217106 - 41217073
Alignment:
Q  36 acacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||||||||||||||||||||    
T  41217106 acacgaaaacccatgaaaatgcacccaatgatga 41217073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 51627136 - 51627075
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||| ||| ||||  |||| ||||| |||||||||| ||||||||||||    
T  51627136 agtccaaaatgactaaattacccttctaacacgaaaactcatgaaaatgtacccaatgatga 51627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 17023761 - 17023789
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  17023761 aaaacccatgaaaatgcacccaatgatga 17023789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 20177935 - 20177963
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  20177935 aaaacccatgaaaatgcacccaatgatga 20177963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22402562 - 22402495
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||| |||||||||| ||||  ||||  ||| |||||| |||||||||||||||||    
T  22402562 acccctaagtccaaaataactaaaatacccttctaacacggaaa-ccatgagaatgcacccaatgatga 22402495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 27329230 - 27329174
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||| ||||  ||||  |||||||||||||||||| |||||||||    
T  27329230 aaaatgaccaaaatacacttctaacacggaaacccatgaaaatgcacacaatgatga 27329174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25296936 - 25297002
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||    
T  25296936 acccctaagtctaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaatgat 25297002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 25758956 - 25759022
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||||||||||||||    
T  25758956 acccctaagtctaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaatgat 25759022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24716334 - 24716266
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  ||| ||||||||||||||||||||||||    
T  24716334 acccctaagtctaaaatgactaaaatactcttctaacacggaaagccatgaaaatgcacccaatgatga 24716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 43372973 - 43372904
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||||||||||||||||||||  |||  ||||  |||||||||||||||||||||||||||||    
T  43372973 acccttaagtctaaaatgactaaaataccattctaacacggaaacccatgaaaatgcacccaatgatgat 43372904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37612459 - 37612527
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||| |||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  37612459 acccctaagtccaaaatgaataaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 37612527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23158954 - 23159019
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||||||| ||| ||||  |||| ||||||||| |||||||||||||||||    
T  23158954 acccctaagtctaaaatgactaaattacccttctaacacgaaaacccat-aaaatgcacccaatgat 23159019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20561079 - 20561014
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||| |||||||||||||||    
T  20561079 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatga 20561014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20572641 - 20572576
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||| |||||||||||||||    
T  20572641 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatga 20572576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24385234 - 24385165
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||| |||||||||||||||| ||||   |||  |||||||||||||||||||||||||||||    
T  24385234 acccttaagtccaaaatgactaaaatactcttctagcacggaaacccatgaaaatgcacccaatgatgat 24385165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41247449 - 41247514
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| |||   ||||  |||||||||||||||||||||||||    
T  41247449 acccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatga 41247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41248144 - 41248079
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| |||   ||||  |||||||||||||||||||||||||    
T  41248144 acccctaagtccaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatga 41248079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16193337 - 16193269
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||| ||||||||||||||||||| |||   ||||  ||||||||||||||||||||||||||||    
T  16193337 acccttaattctaaaatgactaaaatacccttataacacggaaacccatgaaaatgcacccaatgatga 16193269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 16404486 - 16404418
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||  ||||  ||||||||| ||||||||||||||||||    
T  16404486 acccctaagtgcaaaatgactaaaatacccttctaacacggaaacccatgcaaatgcacccaatgatga 16404418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20653485 - 20653417
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||| ||||||||| ||||||||    
T  20653485 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacctaatgatga 20653417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22221806 - 22221738
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||| ||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  22221806 acccttaagtccaaaacgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 22221738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22228148 - 22228080
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||| ||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  22228148 acccttaagtccaaaacgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 22228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 9950597 - 9950535
Alignment:
Q  7 aagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| |||||||||||||||| ||||  ||||  |||||||||||||| |||||||||||||    
T  9950597 aagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatacacccaatgatga 9950535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 275225 - 275294
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||| ||||||||| ||||  ||||   ||||||||||||||||| ||||||||||    
T  275225 acccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaaaatgcactcaatgatgat 275294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 640624 - 640555
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||| ||||||||| ||||  ||||   ||||||||||||||||| ||||||||||    
T  640624 acccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaaaatgcactcaatgatgat 640555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 826430 - 826361
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||| ||||||||| ||||  ||||   ||||||||||||||||| ||||||||||    
T  826430 acccttaagtctaaaatggctaaaatacccttctaacacgggaacccatgaaaatgcactcaatgatgat 826361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25710557 - 25710492
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||| |||||||||||||||  ||| ||||  | || ||||||||||||||||||||||||||    
T  25710557 acccctatgtctaaaatgactaatttacccttctaatacgaaaacccatgaaaatgcacccaatga 25710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22982065 - 22982133
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| |||  |||  ||||  ||||||||||||||||||| ||||||||    
T  22982065 acccctaagtccaaaatgactaaattacctttctaacacggaaacccatgaaaatgcaccaaatgatga 22982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23150576 - 23150641
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||||||||||||||||||||| ||| ||||  |||| ||||||||| |||  ||||||||||||    
T  23150576 acccctaagtctaaaatgactaaattacccttctaacacgaaaacccat-aaatcgcacccaatgat 23150641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 6999789 - 6999736
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||| ||||||| ||||  ||||  |||||||||||||||||||||||||    
T  6999789 aaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 6999736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 19992526 - 19992473
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||| ||||||| ||||  ||||  |||||||||||||||||||||||||    
T  19992526 aaaatgaccaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 19992473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24928300 - 24928235
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| |||||| |||||||||||||||| ||||   |||  ||||||||||||||||||| |||||    
T  24928300 acccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaaaatgcaccaaatga 24928235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 29760737 - 29760798
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||  ||||  ||||  ||||||||||||||| ||| |||||    
T  29760737 ctaagtctaaaatgactaaaatatccttctaacacggaaacccatgaaaatgaacctaatga 29760798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21258988 - 21258924
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatg 65  Q
    ||||||||||| ||||||||||||  |  ||||  |||| ||| |||||||||||||||||||||    
T  21258988 acccctaagtccaaaatgactaaatcaaccttctaacacgaaagcccatgaaaatgcacccaatg 21258924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 23837994 - 23838022
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  23837994 aaaacccatgaaaatgcacccaatgatga 23838022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25123231 - 25123298
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||||||||||  ||||  ||||  ||| ||||||||||||| ||||||||||    
T  25123231 acccataagtctaaaatgactaaaatatccttcaaacacggaaa-ccatgaaaatgcatccaatgatga 25123298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39116059 - 39116126
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||| ||||||||||| ||||  | ||  ||||| ||||||||||||||||||||||    
T  39116059 acccctaagtccaaaa-gactaaaatacccttctaatacggaaaccaatgaaaatgcacccaatgatga 39116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 32951451 - 32951517
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  32951451 ccctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 32951517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24182588 - 24182520
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||| ||||||||||||||||| ||||||||||    
T  24182588 acccctaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcaaccaatgatga 24182520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 27182048 - 27181980
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  |||   ||||||||||||||||||||||||||||    
T  27182048 acccctaagtctaaaatgactaaaatacccttctaacatggaaacccatgaaaatgcacccaatgatga 27181980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 4866028 - 4866093
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  4866028 cctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 4866093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1167687 - 1167619
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||| ||||||||||||||||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  1167687 acccctaagtttaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatga 1167619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28902991 - 28903059
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||| ||||||||||||    
T  28902991 acccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatga 28903059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28939386 - 28939454
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||| ||||||||||||    
T  28939386 acccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgtacccaatgatga 28939454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23515321 - 23515387
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||| |||||||||||||||||||||    
T  23515321 acccctaagtccaaaatgactaaaatacccttctaacacggaaactcatgaaaatgcacccaatgat 23515387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28262242 - 28262304
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaa 63  Q
    ||||||||||| ||||| |||||||||| ||||| |||| |||||||||| ||||||||||||    
T  28262242 acccctaagtccaaaataactaaaatacccttccaacacgaaaacccatgcaaatgcacccaa 28262304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 19349811 - 19349875
Alignment:
Q  2 cccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||| |||||||||||| ||| ||||  ||||  |||||||||||||||||||||||||    
T  19349811 cccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatga 19349875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 11584838 - 11584900
Alignment:
Q  7 aagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||| ||||  ||||  |||||||||||||||||| | |||||||    
T  11584838 aagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcactcgatgatga 11584900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37984142 - 37984208
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| |||| |||||||||||| ||| ||||  |||| ||||||||| |||||||||||||||||    
T  37984142 acccctgagtccaaaatgactaaattacccttctaacacgaaaacccataaaaatgcacccaatgat 37984208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 7729225 - 7729286
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  7729225 agtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 7729286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 23494685 - 23494750
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatg 68  Q
    |||| |||| |||||||||||| ||| ||||  |||| ||||||||||||||| ||||||||||||    
T  23494685 ccctgagtccaaaatgactaaattactcttctaacacgaaaacccatgaaaatccacccaatgatg 23494750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 433229 - 433297
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| |||  |||  |||| ||||||||||||||||||| |||||||||    
T  433229 acccctgagtccaaaatgactaaattaccattctaacacgaaaacccatgaaaatgcactcaatgatga 433297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21205699 - 21205766
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||| ||||||||||| ||||  | ||  ||||||||||||||||||||||||||||    
T  21205699 acccctaagtccaaaa-gactaaaatacccttctaatacggaaacccatgaaaatgcacccaatgatga 21205766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21651472 - 21651540
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| ||||||||||||||| ||||||| ||||  ||||  ||||||||||| |||||| |||||||||    
T  21651472 acccttaagtctaaaatgacaaaaatacccttctaacacggaaacccatgaagatgcactcaatgatga 21651540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 23418022 - 23418082
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatg 65  Q
    ||||||| ||||||||||||||||  |||| |||| |||||| || |||||||||||||||    
T  23418022 ctaagtccaaaatgactaaaataccattccaacacgaaaaccaattaaaatgcacccaatg 23418082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22662160 - 22662094
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||| |||||||||||||||  ||||  ||||   ||||||||||||||||| |||||||    
T  22662160 acccctaagtccaaaatgactaaaatatccttctaacacgggaacccatgaaaatgcactcaatgat 22662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20712869 - 20712937
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||| | ||||||||||||||| ||||| ||||   ||| ||||||||||||| ||||||||||    
T  20712869 acccctaagt-tcaaatgactaaaatacccttccaacacgggaactcatgaaaatgcactcaatgatgat 20712937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 23467237 - 23467298
Alignment:
Q  8 agtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||| ||| |||   ||||  ||||||||||||||||||||||||||||    
T  23467237 agtccaaaatgactaaattacccttataacacggaaacccatgaaaatgcacccaatgatga 23467298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 16834804 - 16834756
Alignment:
Q  19 actaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| ||| ||||| |||| ||||||||| |||||||||||||||||    
T  16834804 actaaattacccttccaacacgaaaacccataaaaatgcacccaatgat 16834756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 21222099 - 21222071
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  21222099 aaaacccatgaaaatgcacccaatgatga 21222071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21397883 - 21397950
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||  | ||  ||| ||||||||||||||||||||||||    
T  21397883 acccctaagttcaaaatgactaaaatacccttctaatacggaaa-ccatgaaaatgcacccaatgatga 21397950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Complemental strand, 35790592 - 35790564
Alignment:
Q  42 aaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||||||||||||||    
T  35790592 aaacccatgaaaatgcacccaatgatgat 35790564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 5488 - 5557
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  5488 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 5557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 192970 - 192901
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||||||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  192970 acccttaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 192901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 329 - 393
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  329 ctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 557 - 621
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||    
T  557 ccctaagtccaaaatgactaaaatacccttccaacacggaaacccatgaaaatgcacccaatgat 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6301 - 6233
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  6301 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 6233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 289 - 222
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||| ||| |||||||||||||||| ||||  ||||  ||||| ||||||||||||||||||||||    
T  289 acccctacgtccaaaatgactaaaatacccttctaacacggaaacc-atgaaaatgcacccaatgatga 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5874 - 5806
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||||||    
T  5874 acccctaagtccaaaatgactaaaatacccttccaacacggaaacccaggaaaatgcacccaatgatga 5806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11022 - 10954
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  11022 acccctaagttcaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcacccaatgatga 10954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30877 - 30945
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  30877 acccctaaatctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 30945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48916 - 48984
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| || |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  48916 acccctaaatccaaaatgactaaaatacccttcaaacacagaaacccatgaaaatgcacccaatgatga 48984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 62364 - 62432
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| || |||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  62364 acccctaaatccaaaatgactaaaatacccttcaaacacagaaacccatgaaaatgcacccaatgatga 62432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16695 - 16763
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||||||||||||    
T  16695 acccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatga 16763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 26226 - 26294
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||| ||||||||||||||||||||||||||||    
T  26226 acccctaagtccaaaatgactaaattacccttctaacacagaaacccatgaaaatgcacccaatgatga 26294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 131704 - 131636
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||| |  |||  ||||||||||||||||||||||||||||    
T  131704 acccctaagtccaaaatgactaaaatacccttacaccacggaaacccatgaaaatgcacccaatgatga 131636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12848 - 12916
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| ||||| |||||||||||| ||| || |  ||||  ||||||||||||||||||||||||||||    
T  12848 accccaaagtccaaaatgactaaattaccctgctaacacggaaacccatgaaaatgcacccaatgatga 12916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 4652 - 4589
Alignment:
Q  6 taagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  4652 taagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 4589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 97608 - 97675
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatg 68  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||    
T  97608 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatg 97675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24179 - 24111
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  || ||||||||||||| ||||  ||||  ||||||||| ||||||||||||||||||    
T  24179 acccctaagttcaatatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatgatga 24111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5349 - 5280
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||||||||||||| |||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  5349 acccttaagtctaaaatgactgaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 5280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 364 - 299
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||||||| ||||  | ||  |||||||||||||||||||||||||    
T  364 acccctaagtctaaaatgactaaaatacccttcaaatacggaaacccatgaaaatgcacccaatga 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 7451 - 7479
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  7451 aaaacccatgaaaatgcacccaatgatga 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5614 - 5545
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||| |||||||||||||||| ||||  | ||  |||||||||||||||||||||||||||||    
T  5614 acccctaagtcgaaaatgactaaaatacccttctaagacggaaacccatgaaaatgcacccaatgatgat 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45151 - 45086
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||||||||| ||||  | ||  |||||||||||||||||||||||||    
T  45151 acccctaagtctaaaatgactaaaatacccttcaaatacggaaacccatgaaaatgcacccaatga 45086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36576 - 36511
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  36576 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 36511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42093 - 42158
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| |||||| |||||||||||||||| ||||   |||  |||||||||||||||||||||||||    
T  42093 acccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaaaatgcacccaatga 42158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 107287 - 107218
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||| ||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  107287 acccttaagtttaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 107218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 88975 - 88906
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| ||||| ||||||||||||||||| ||||  ||||  |||||||| |||||||||||||| |||||    
T  88975 acccttaagtttaaaatgactaaaatacccttctaacacggaaacccataaaaatgcacccaataatgat 88906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 246944 - 246879
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||| ||||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  246944 acccctaagtataaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 246879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 122663 - 122598
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||    
T  122663 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatga 122598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5075 - 5143
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||| | |||||||||||||||| ||||  ||||  ||||||||||||||||||||||||||||    
T  5075 acccctaagcccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatga 5143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0537 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0537
Description:

Target: scaffold0537; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 689 - 757
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||||||||||||||| ||||  ||||  ||||||||| ||||||||||||||||||    
T  689 acccctaaatctaaaatgactaaaatacccttctaacacggaaacccatggaaatgcacccaatgatga 757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 9645 - 9709
Alignment:
Q  5 ctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||| ||||  ||||  ||||||||||||||||||||||| ||||    
T  9645 ctaagtctaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaattatga 9709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34449 - 34517
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| ||||| |||||||||||||||| ||||  ||||| ||||| ||||||||||||||||||||||    
T  34449 acccccaagtccaaaatgactaaaatacccttctaacacagaaacctatgaaaatgcacccaatgatga 34517  T

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Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39095 - 39163
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||| |||||||||||||||||||||    
T  39095 acccctaagtccaaaatgactaaaatacccttctaacacgtaaacccttgaaaatgcacccaatgatga 39163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 108918 - 108850
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  108918 acccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 108850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 117419 - 117351
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||| ||| ||||  ||||  ||||||||||||||||||||||||||||    
T  117419 acccctaagtccaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatgatga 117351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 41454 - 41522
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  || |||||||||||||||||||||||||    
T  41454 acccctaagtccaaaatgactaaaatacccttctaacacggaatcccatgaaaatgcacccaatgatga 41522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 80637 - 80705
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||||||||  |||| ||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  80637 acccctaagttcaaaa-gactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 80705  T

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Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 127677 - 127609
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  | ||  ||||||||||||||||| ||||||||||    
T  127677 acccctaagtctaaaatgactaaaatacccttctaatacggaaacccatgaaaatgcatccaatgatga 127609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35704 - 35770
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||| ||  |||||||||||||||||    
T  35704 acccctaagtcaaaaatgactaaaatacccttctaacacggaaactcacaaaaatgcacccaatgat 35770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 12878 - 12945
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||| |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  12878 ccctgagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 12945  T

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Target: scaffold0039 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 11987 - 11920
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||||| ||||||  ||||  ||||  |||||||||||||||||||||||||||||    
T  11987 ccctaagtctaaaatgaccaaaatatccttctaacacggaaacccatgaaaatgcacccaatgatgat 11920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 86129 - 86192
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||||||    
T  86129 ccctaagtctaaaatgactaaattacccttctaacacggaaacccatgaaaatgcacccaatga 86192  T

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Target: scaffold0014; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 160094 - 160162
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||| ||||| |||||||||||| ||| ||||  |||| ||||||||||||||||||||||| |||||    
T  160094 acccccaagtccaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcacccaacgatga 160162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4712 - 4646
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||||||||||||||||||| |||||    
T  4712 acccctaagtccaaaatgactaaaatacacttcaaacacggaaacccatgaaaatgcacccgatgat 4646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8362 - 8295
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||| |||| ||| ||||  |||| ||| |||||| ||||||||||||||||||    
T  8362 acccctaagtccaaaatgattaaattacccttctaacacgaaatcccatg-aaatgcacccaatgatga 8295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 5332 - 5386
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  5332 aaaattactaaattactcttccaacacaaaaacccatgaaaatgcacccaatgat 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 63343 - 63277
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||| |||||| |||||||||||||||| ||||  ||||| ||||||||||||||||||| ||||||    
T  63343 acccgtaagtccaaaatgactaaaatacccttctaacacagaaacccatgaaaatgcaccaaatgat 63277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 6791 - 6848
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||    
T  6791 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcacccaatgatgat 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1813 - 1748
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| |||||||||||| ||| ||||  |||| ||||||||||||||||||| |||||||||    
T  1813 cctaagtcgaaaatgactaaattacccttctaacacgaaaacccatgaaaatgcactcaatgatga 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43131 - 43196
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| ||||||||||||||||||||||| ||||   |||  |||||||||||||||||||||||||    
T  43131 acccttaagtctaaaatgactaaaatacccttctagcacggaaacccatgaaaatgcacccaatga 43196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 50686 - 50620
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||| ||||  ||||  ||  ||||||||||||||||||||||||    
T  50686 acccctaagtctaaaatgactaaaatacccttctaacacggaa--ccatgaaaatgcacccaatgatga 50620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 165736 - 165667
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||| |||||||||||||||| |||||| ||||  ||||  ||||||| |||||||||||||||||||||    
T  165736 acccttaagtctaaaatgacttaaatacccttctaacacggaaacccacgaaaatgcacccaatgatgat 165667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 165004 - 165072
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||||||| ||||| ||||  |||||||| ||||||||  |||||||||    
T  165004 acccctaagttcaaaatgactaaaatacccttccaacacggaaacccattaaaatgcattcaatgatga 165072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11162 - 11094
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| || ||||||||| |||  |||  |||| |||||||||||||||||||||||||||||    
T  11162 acccctaagtccaagatgactaaattaccattctaacacgaaaacccatgaaaatgcacccaatgatga 11094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5144 - 5076
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| | |||||||||||||| ||||  ||||  ||||||||||||||||||| ||||||||    
T  5144 acccctaagtccataatgactaaaatacccttctaacacggaaacccatgaaaatgcacctaatgatga 5076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 780 - 847
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||| ||||||||||||||||||    
T  780 acccctaagtccaaaatgactaaaatacccttctaacacggaaacccatg-aaatgcacccaatgatga 847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 15638 - 15694
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| ||||||| ||||  ||||| ||||||||||||||||||||||||||||    
T  15638 aaaatgaccaaaatacccttctaacacagaaacccatgaaaatgcacccaatgatga 15694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 36419 - 36352
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||||||||||||||||||||||| ||||    
T  36419 acccctaagtccaaaatgactaaaatacccttctaacac-gaaacccatgaaaatgcacccaataatga 36352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 71408 - 71476
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||||| |||||| ||| ||||  ||||||||| || ||||||||| |||||||||||    
T  71408 acccctaagtctaaaattactaaattacccttctaacacaaaaatccttgaaaatgcgcccaatgatga 71476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 92452 - 92520
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||| ||||||||||  |||  ||||  ||||||||||||||||||||||||||||    
T  92452 acccctaagtccaaaataactaaaataccattctaacacggaaacccatgaaaatgcacccaatgatga 92520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 337 - 280
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    ||||| |||||| ||| ||||  | |||||||||||||||||||||||||||||||||    
T  337 aaaattactaaattacccttctaatacaaaaacccatgaaaatgcacccaatgatgat 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 79341 - 79274
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||| ||| ||||||||||||| ||||||||||    
T  79341 acccctaagtccaaaatgactaaaatacccttctaacacataaa-ccatgaaaatgcatccaatgatga 79274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 70076 - 70009
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  ||| |||||||||| |||||||||||||    
T  70076 acccctaagtccaaaatgactaaaatacccttctaacacggaaa-ccatgaaaatacacccaatgatga 70009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15491 - 15424
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatg 68  Q
    |||| |||||| |||||||||||||||| ||||  ||||  ||||||||||||||||| |||||||||    
T  15491 acccgtaagtccaaaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatg 15424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 3969 - 4023
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    ||||| || ||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  3969 aaaattacgaaattacccttccaacacaaaaacccatgaaaatgcacccaatgat 4023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 6028 - 5971
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatgat 70  Q
    |||||||| ||||||| ||||  |||| |||||||||||||||| |||||||||||||    
T  6028 aaaatgaccaaaatacccttctaacacgaaaacccatgaaaatgtacccaatgatgat 5971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 10734 - 10799
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||  |||||||||||||||| ||||  |||   ||||||||||||||||||||||||||||    
T  10734 cctaagttcaaaatgactaaaatacccttctaacagggaaacccatgaaaatgcacccaatgatga 10799  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30751 - 30686
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||| |||||| |||||||||||||||| ||||   |||  |||||||||||||||||||||||||    
T  30751 acccttaagtccaaaatgactaaaatacccttctagcacggaaacccatgaaaatgcacccaatga 30686  T

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Target: scaffold1979 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1979
Description:

Target: scaffold1979; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 45 - 101
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||| ||||   |||  ||||||||||||||||||||||||||||    
T  45 aaaatgactaaaatacccttctagcacggaaacccatgaaaatgcacccaatgatga 101  T

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Target: scaffold1867 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 948 - 1004
Alignment:
Q  13 aaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||| ||||  ||||  ||||||||||||||||||| ||||||||    
T  948 aaaatgactaaaatacccttctaacacggaaacccatgaaaatgcaccaaatgatga 1004  T

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Target: scaffold1164 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2144 - 2212
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||  ||||||||||||||| ||||  ||||  ||||||||| |||||||| |||||||||    
T  2144 acccctaagtccgaaatgactaaaatacccttctaacacggaaacccatggaaatgcactcaatgatga 2212  T

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Target: scaffold0692 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4574 - 4507
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  | ||  ||| ||||||||||||||||||||||||    
T  4574 acccctaagtccaaaatgactaaaatactcttctaatacggaaa-ccatgaaaatgcacccaatgatga 4507  T

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Target: scaffold0342 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13064 - 13132
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||  |||||||||||| ||| |||   |||| ||||||||||||||||||| |||||||||    
T  13064 acccctaagttcaaaatgactaaattacccttataacacgaaaacccatgaaaatgcactcaatgatga 13132  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9781 - 9849
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  || |  ||||||||| ||||||||||||| ||||    
T  9781 acccctaagtccaaaatgactaaaatacccttctaacgcggaaacccatggaaatgcacccaattatga 9849  T

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Target: scaffold0266 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3083 - 3015
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||||||| ||||  | ||  ||||||||||||||||||||||| ||||    
T  3083 acccttaagtccaaaatgactaaaatacccttctaatacggaaacccatgaaaatgcacccaattatga 3015  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 9109 - 9177
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| ||||||||||||||||  |||  |||   |||||||||||||| |||||||||||||    
T  9109 acccctaagtccaaaatgactaaaataccattctaacatggaaacccatgaaaatacacccaatgatga 9177  T

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Target: scaffold0120 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22293 - 22360
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||| |||||||||||||||| ||||  ||||  |||  |||||||||||||||||||||||    
T  22293 acccctaagtccaaaatgactaaaatacccttctaacacggaaa-tcatgaaaatgcacccaatgatga 22360  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 102425 - 102357
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||| |||||||||||| |||  |||  ||| ||||||||| ||||||||||||||||||||    
T  102425 acccgtaagtccaaaatgactaaactaccattctaacataaaaacccacgaaaatgcacccaatgatga 102357  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 111994 - 111932
Alignment:
Q  4 cctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatga 66  Q
    |||||||| |||||||||||||||| ||||  ||||   |||||||| |||||||||||||||    
T  111994 cctaagtccaaaatgactaaaatacccttctaacacgggaacccatggaaatgcacccaatga 111932  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 19409 - 19354
Alignment:
Q  14 aaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||| ||||  ||||  ||||||||||||||| ||||||||||||    
T  19409 aaatgactaaaatacccttctaacacggaaacccatgaaaatgtacccaatgatga 19354  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 20965 - 21020
Alignment:
Q  14 aaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||||||||| ||||  ||||  ||||||||||||||||| ||||||||||    
T  20965 aaatgactaaaatacccttctaacacggaaacccatgaaaatgcatccaatgatga 21020  T

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Target: scaffold0151 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21864 - 21798
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| |||| |||||||||||| ||| ||||  |||| ||||||||| ||||||||||| |||||    
T  21864 acccctgagtccaaaatgactaaattacccttctaacacgaaaacccatcaaaatgcaccccatgat 21798  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21878 - 21812
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||| |||||| |||| ||||||| ||| ||||  |||| ||||||||| |||||||||||||||||    
T  21878 acccataagtccaaaacgactaaattacccttctaacacgaaaacccattaaaatgcacccaatgat 21812  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 56360 - 56426
Alignment:
Q  3 ccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    ||||||||| ||||||||||||||||  ||   ||||  |||||||| |||||||||||||||||||    
T  56360 ccctaagtccaaaatgactaaaatacctttataacacggaaacccataaaaatgcacccaatgatga 56426  T

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Target: scaffold1272 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 1068 - 1096
Alignment:
Q  41 aaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||||||||||||||||||||||||    
T  1068 aaaacccatgaaaatgcacccaatgatga 1096  T

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Target: scaffold0610 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9561 - 9495
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||||| |||||||| |||||| ||| ||||  |||| ||| |||||||||||||||||||||||||    
T  9561 acccctaa-tctaaaattactaaattacccttctaacacgaaa-cccatgaaaatgcacccaatgatga 9495  T

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Target: scaffold0561 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 2427 - 2379
Alignment:
Q  19 actaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgat 67  Q
    |||||| ||| ||||| |||| ||||||||| |||||||||||||||||    
T  2427 actaaattacccttccaacacgaaaacccataaaaatgcacccaatgat 2379  T

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Target: scaffold0465 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 9511 - 9444
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||| |||||||||||||| |||||||| ||||  ||||  || | |||||||||||||||||||||||    
T  9511 acccttaagtctaaaatgattaaaatacccttctaacacggaa-ctcatgaaaatgcacccaatgatga 9444  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 89340 - 89272
Alignment:
Q  1 acccctaagtctaaaatgactaaaatacgcttcccacacaaaaacccatgaaaatgcacccaatgatga 69  Q
    |||||| |||| |||||||||||| ||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  89340 acccctgagtccaaaatgactaaattacccttctaacacgaaaactcataaaaatgcactcaatgatga 89272  T

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