View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13955_low_73 (Length: 205)

Name: NF13955_low_73
Description: NF13955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13955_low_73
NF13955_low_73
[»] scaffold0025 (3 HSPs)
scaffold0025 (1-155)||(146876-147030)
scaffold0025 (25-131)||(9154-9261)
scaffold0025 (1-67)||(149014-149081)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-156)||(172179-172334)
scaffold0001 (1-156)||(177882-178037)
scaffold0001 (51-125)||(164829-164903)
[»] chr4 (36 HSPs)
chr4 (1-155)||(122164-122318)
chr4 (19-155)||(13246707-13246844)
chr4 (21-125)||(15135836-15135939)
chr4 (21-125)||(15272140-15272243)
chr4 (25-131)||(15674940-15675047)
chr4 (25-131)||(10104101-10104208)
chr4 (25-131)||(33241005-33241112)
chr4 (19-124)||(55376420-55376525)
chr4 (25-131)||(31132619-31132726)
chr4 (48-125)||(16608968-16609045)
chr4 (48-125)||(26680517-26680594)
chr4 (1-125)||(40885368-40885491)
chr4 (51-125)||(32460561-32460635)
chr4 (48-125)||(16327795-16327872)
chr4 (93-155)||(54118168-54118230)
chr4 (55-125)||(14500074-14500144)
chr4 (48-125)||(10488879-10488956)
chr4 (50-125)||(14952085-14952160)
chr4 (51-125)||(8045272-8045346)
chr4 (48-118)||(13048090-13048160)
chr4 (48-125)||(20001030-20001107)
chr4 (51-124)||(22738577-22738650)
chr4 (48-124)||(26339327-26339403)
chr4 (23-125)||(7131914-7132014)
chr4 (51-123)||(18248527-18248599)
chr4 (50-125)||(15287119-15287194)
chr4 (50-125)||(15294228-15294303)
chr4 (50-124)||(22351938-22352012)
chr4 (39-125)||(47357958-47358043)
chr4 (23-125)||(14996445-14996545)
chr4 (23-125)||(17145506-17145606)
chr4 (51-125)||(8378493-8378567)
chr4 (55-125)||(16523146-16523216)
chr4 (51-125)||(19697236-19697310)
chr4 (51-125)||(19707821-19707895)
chr4 (1-125)||(52265312-52265435)
[»] chr3 (46 HSPs)
chr3 (1-155)||(2050085-2050239)
chr3 (1-155)||(19260657-19260811)
chr3 (1-155)||(12029980-12030135)
chr3 (1-125)||(17912306-17912430)
chr3 (1-125)||(38168237-38168362)
chr3 (1-125)||(30153265-30153389)
chr3 (38-155)||(13839169-13839287)
chr3 (21-125)||(53771365-53771468)
chr3 (1-96)||(5240537-5240632)
chr3 (21-125)||(16261777-16261880)
chr3 (25-125)||(33342204-33342305)
chr3 (21-125)||(11986009-11986112)
chr3 (52-125)||(28558494-28558567)
chr3 (25-125)||(54685132-54685233)
chr3 (39-155)||(14842433-14842549)
chr3 (48-125)||(2449107-2449184)
chr3 (45-125)||(13954756-13954836)
chr3 (45-125)||(45861122-45861202)
chr3 (51-125)||(14285289-14285363)
chr3 (48-125)||(15615137-15615214)
chr3 (21-125)||(54651764-54651867)
chr3 (93-155)||(19232058-19232121)
chr3 (93-155)||(16744041-16744103)
chr3 (48-125)||(23492696-23492773)
chr3 (52-125)||(51960990-51961063)
chr3 (51-125)||(19947026-19947100)
chr3 (51-125)||(11477053-11477127)
chr3 (48-125)||(8268605-8268682)
chr3 (48-125)||(8275705-8275782)
chr3 (51-125)||(16933827-16933901)
chr3 (23-125)||(18896893-18896993)
chr3 (23-125)||(18911300-18911400)
chr3 (23-125)||(25059046-25059146)
chr3 (1-124)||(8632111-8632231)
chr3 (52-125)||(12264668-12264741)
chr3 (1-34)||(54037930-54037963)
chr3 (93-125)||(17955884-17955916)
chr3 (23-125)||(5228619-5228719)
chr3 (23-125)||(15468189-15468289)
chr3 (93-128)||(15857163-15857198)
chr3 (1-125)||(40939446-40939570)
chr3 (51-124)||(44229293-44229366)
chr3 (93-125)||(2844514-2844546)
chr3 (93-125)||(3992873-3992905)
chr3 (93-125)||(54038024-54038056)
chr3 (93-125)||(55513193-55513225)
[»] scaffold0266 (2 HSPs)
scaffold0266 (1-155)||(1399-1554)
scaffold0266 (1-155)||(3416-3570)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-156)||(272299-272454)
[»] chr7 (38 HSPs)
chr7 (4-155)||(36052941-36053092)
chr7 (1-155)||(16212041-16212195)
chr7 (19-155)||(13036863-13037000)
chr7 (19-155)||(11580586-11580724)
chr7 (1-125)||(3049905-3050030)
chr7 (1-125)||(25124450-25124574)
chr7 (1-96)||(17817268-17817363)
chr7 (1-96)||(19049638-19049733)
chr7 (21-125)||(42056117-42056220)
chr7 (39-125)||(2029244-2029330)
chr7 (21-125)||(2190014-2190117)
chr7 (21-125)||(13321334-13321437)
chr7 (25-131)||(15709463-15709570)
chr7 (1-125)||(15516669-15516793)
chr7 (25-131)||(36024446-36024554)
chr7 (48-125)||(7293333-7293410)
chr7 (48-125)||(11516544-11516621)
chr7 (48-125)||(15441433-15441510)
chr7 (48-125)||(30261998-30262075)
chr7 (51-125)||(47480902-47480976)
chr7 (94-151)||(3060245-3060302)
chr7 (48-125)||(14113858-14113935)
chr7 (48-124)||(25292207-25292283)
chr7 (48-125)||(14423509-14423585)
chr7 (51-124)||(10000245-10000318)
chr7 (48-125)||(13758677-13758754)
chr7 (51-125)||(371417-371491)
chr7 (51-124)||(48622541-48622614)
chr7 (50-125)||(15927875-15927950)
chr7 (50-125)||(18979895-18979970)
chr7 (51-134)||(295849-295932)
chr7 (50-125)||(13572981-13573056)
chr7 (23-125)||(15759963-15760063)
chr7 (52-125)||(15950667-15950740)
chr7 (51-124)||(16418805-16418878)
chr7 (1-34)||(32493852-32493885)
chr7 (93-125)||(126738-126770)
chr7 (93-125)||(32493946-32493978)
[»] chr8 (25 HSPs)
chr8 (1-155)||(43373300-43373454)
chr8 (1-155)||(24928624-24928779)
chr8 (2-155)||(16193552-16193704)
chr8 (1-125)||(24385560-24385684)
chr8 (19-125)||(41506634-41506741)
chr8 (19-124)||(7000445-7000551)
chr8 (48-125)||(5238404-5238481)
chr8 (48-125)||(22907083-22907160)
chr8 (48-125)||(24661117-24661194)
chr8 (48-125)||(43685863-43685940)
chr8 (51-125)||(21494314-21494388)
chr8 (51-125)||(22886654-22886728)
chr8 (93-155)||(16404900-16404961)
chr8 (51-125)||(3431134-3431208)
chr8 (51-125)||(2545265-2545339)
chr8 (39-125)||(17345887-17345973)
chr8 (48-125)||(16872923-16873000)
chr8 (23-125)||(13662114-13662214)
chr8 (23-125)||(13720777-13720877)
chr8 (93-125)||(24716762-24716794)
chr8 (23-125)||(22006107-22006207)
chr8 (51-125)||(16038744-16038818)
chr8 (93-125)||(274766-274798)
chr8 (93-125)||(641051-641083)
chr8 (93-125)||(826857-826889)
[»] scaffold0498 (1 HSPs)
scaffold0498 (1-154)||(9154-9307)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-155)||(36742-36899)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-155)||(128007-128157)
[»] chr1 (19 HSPs)
chr1 (1-155)||(20913305-20913459)
chr1 (1-155)||(20931620-20931774)
chr1 (19-155)||(20893476-20893612)
chr1 (38-155)||(37844319-37844436)
chr1 (38-155)||(20445956-20446074)
chr1 (38-155)||(20531721-20531838)
chr1 (93-155)||(41394497-41394559)
chr1 (48-125)||(45051726-45051803)
chr1 (48-125)||(51452809-51452886)
chr1 (48-124)||(7640806-7640882)
chr1 (48-125)||(2116558-2116635)
chr1 (48-124)||(22035755-22035831)
chr1 (1-124)||(9783870-9783990)
chr1 (52-125)||(15861285-15861358)
chr1 (48-125)||(46523695-46523772)
chr1 (25-125)||(22228115-22228213)
chr1 (50-110)||(18598849-18598908)
chr1 (93-125)||(21860334-21860366)
chr1 (93-125)||(44034871-44034903)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-155)||(48873-49027)
scaffold0023 (23-125)||(153856-153956)
scaffold0023 (92-125)||(61121-61154)
[»] chr5 (32 HSPs)
chr5 (19-155)||(27182396-27182533)
chr5 (1-125)||(21205249-21205372)
chr5 (25-155)||(18530919-18531053)
chr5 (48-155)||(23507240-23507347)
chr5 (25-125)||(21651018-21651119)
chr5 (21-125)||(108657-108760)
chr5 (19-130)||(23981330-23981442)
chr5 (19-123)||(2032135-2032240)
chr5 (25-131)||(22053684-22053791)
chr5 (25-125)||(25005137-25005238)
chr5 (21-121)||(32951016-32951115)
chr5 (48-125)||(20623286-20623363)
chr5 (48-125)||(21233397-21233474)
chr5 (48-125)||(37053061-37053138)
chr5 (48-125)||(16536514-16536591)
chr5 (48-125)||(25900275-25900352)
chr5 (54-125)||(7529228-7529299)
chr5 (48-125)||(1219392-1219469)
chr5 (21-125)||(35790945-35791047)
chr5 (48-124)||(23328865-23328941)
chr5 (48-124)||(24616469-24616545)
chr5 (48-124)||(24712845-24712921)
chr5 (48-124)||(24745863-24745939)
chr5 (51-125)||(9730236-9730310)
chr5 (51-125)||(17909823-17909897)
chr5 (52-125)||(16105967-16106040)
chr5 (50-125)||(7425631-7425706)
chr5 (23-125)||(11211913-11212014)
chr5 (39-125)||(23514868-23514954)
chr5 (52-125)||(11343008-11343081)
chr5 (50-125)||(27010146-27010221)
chr5 (51-125)||(34939595-34939669)
[»] chr6 (26 HSPs)
chr6 (20-155)||(23148273-23148409)
chr6 (20-155)||(23153724-23153860)
chr6 (21-125)||(23995247-23995350)
chr6 (19-125)||(27751742-27751849)
chr6 (12-125)||(26090059-26090172)
chr6 (21-125)||(29666181-29666284)
chr6 (51-123)||(15742078-15742150)
chr6 (51-125)||(32276617-32276691)
chr6 (48-125)||(1649976-1650053)
chr6 (25-125)||(35009283-35009384)
chr6 (51-113)||(16299844-16299906)
chr6 (51-125)||(18002353-18002427)
chr6 (51-125)||(18823241-18823315)
chr6 (51-125)||(18839096-18839170)
chr6 (21-125)||(19610325-19610427)
chr6 (23-125)||(1657593-1657693)
chr6 (23-125)||(15862789-15862889)
chr6 (48-125)||(23978076-23978153)
chr6 (50-125)||(16232199-16232274)
chr6 (51-125)||(13620669-13620743)
chr6 (23-125)||(1556312-1556412)
chr6 (94-125)||(4991396-4991427)
chr6 (50-124)||(29869650-29869724)
chr6 (50-110)||(18086697-18086757)
chr6 (93-125)||(19983192-19983224)
chr6 (93-125)||(35015057-35015089)
[»] scaffold0028 (3 HSPs)
scaffold0028 (19-155)||(107633-107770)
scaffold0028 (19-151)||(89303-89436)
scaffold0028 (94-125)||(130880-130911)
[»] chr2 (39 HSPs)
chr2 (19-155)||(22863205-22863342)
chr2 (1-155)||(463013-463156)
chr2 (38-155)||(8891519-8891636)
chr2 (38-155)||(36982309-36982427)
chr2 (25-125)||(9652727-9652828)
chr2 (21-125)||(21273878-21273980)
chr2 (25-131)||(24341240-24341347)
chr2 (21-125)||(25265232-25265335)
chr2 (48-125)||(14906309-14906386)
chr2 (48-125)||(23820388-23820465)
chr2 (19-124)||(32466177-32466281)
chr2 (48-125)||(19689270-19689347)
chr2 (45-125)||(17396519-17396599)
chr2 (50-125)||(20015328-20015403)
chr2 (51-125)||(33128372-33128446)
chr2 (93-155)||(43642881-43642943)
chr2 (93-155)||(20627238-20627301)
chr2 (93-155)||(19794629-19794690)
chr2 (51-125)||(28031092-28031166)
chr2 (48-125)||(12641514-12641591)
chr2 (48-125)||(8944153-8944230)
chr2 (48-125)||(12635740-12635817)
chr2 (48-125)||(12728699-12728776)
chr2 (48-125)||(34824782-34824859)
chr2 (48-124)||(23774444-23774520)
chr2 (51-125)||(17204659-17204733)
chr2 (48-125)||(3798475-3798552)
chr2 (51-124)||(21142203-21142276)
chr2 (23-125)||(16935900-16936000)
chr2 (23-125)||(17006560-17006660)
chr2 (25-124)||(22579689-22579789)
chr2 (51-124)||(5888505-5888578)
chr2 (1-34)||(22275138-22275171)
chr2 (93-125)||(22284278-22284310)
chr2 (94-125)||(25213372-25213403)
chr2 (92-125)||(7507756-7507789)
chr2 (1-34)||(22284371-22284404)
chr2 (93-125)||(22275045-22275077)
chr2 (81-125)||(42177874-42177918)
[»] scaffold0706 (1 HSPs)
scaffold0706 (5-125)||(6355-6475)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-155)||(51018-51170)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-125)||(12326-12450)
[»] scaffold0012 (2 HSPs)
scaffold0012 (47-155)||(247320-247428)
scaffold0012 (23-125)||(34007-34107)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-125)||(193305-193429)
[»] scaffold0302 (1 HSPs)
scaffold0302 (1-155)||(12389-12543)
[»] scaffold0162 (3 HSPs)
scaffold0162 (25-155)||(26271-26402)
scaffold0162 (21-125)||(12063-12166)
scaffold0162 (52-125)||(8051-8125)
[»] scaffold0106 (1 HSPs)
scaffold0106 (1-155)||(42004-42156)
[»] scaffold0011 (1 HSPs)
scaffold0011 (25-155)||(123018-123150)
[»] scaffold0251 (1 HSPs)
scaffold0251 (21-125)||(13214-13317)
[»] scaffold0032 (2 HSPs)
scaffold0032 (25-125)||(55904-56005)
scaffold0032 (39-125)||(108021-108107)
[»] scaffold0058 (1 HSPs)
scaffold0058 (21-125)||(57321-57424)
[»] scaffold0597 (1 HSPs)
scaffold0597 (25-125)||(809-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (25-125)||(9813-9914)
[»] scaffold0234 (1 HSPs)
scaffold0234 (25-125)||(17235-17336)
[»] scaffold0160 (1 HSPs)
scaffold0160 (20-124)||(339-444)
[»] scaffold0158 (1 HSPs)
scaffold0158 (19-124)||(25532-25637)
[»] scaffold0413 (1 HSPs)
scaffold0413 (23-155)||(5922-6052)
[»] scaffold0084 (1 HSPs)
scaffold0084 (21-125)||(55942-56045)
[»] scaffold0118 (1 HSPs)
scaffold0118 (51-125)||(34266-34340)
[»] scaffold0066 (2 HSPs)
scaffold0066 (47-125)||(45338-45416)
scaffold0066 (47-125)||(54724-54802)
[»] scaffold0207 (1 HSPs)
scaffold0207 (51-136)||(18015-18100)
[»] scaffold0175 (2 HSPs)
scaffold0175 (23-155)||(814-944)
scaffold0175 (25-84)||(15238-15298)
[»] scaffold0141 (2 HSPs)
scaffold0141 (48-125)||(22857-22934)
scaffold0141 (48-125)||(27112-27189)
[»] scaffold0124 (1 HSPs)
scaffold0124 (48-125)||(1451-1528)
[»] scaffold0078 (1 HSPs)
scaffold0078 (48-125)||(36935-37012)
[»] scaffold0125 (1 HSPs)
scaffold0125 (51-125)||(41965-42039)
[»] scaffold0772 (1 HSPs)
scaffold0772 (48-125)||(5846-5923)
[»] scaffold0335 (1 HSPs)
scaffold0335 (51-125)||(5434-5508)
[»] scaffold0173 (1 HSPs)
scaffold0173 (51-125)||(5549-5623)
[»] scaffold0132 (1 HSPs)
scaffold0132 (59-125)||(13824-13890)
[»] scaffold0029 (1 HSPs)
scaffold0029 (51-125)||(49710-49784)
[»] scaffold0218 (1 HSPs)
scaffold0218 (103-155)||(4996-5048)
[»] scaffold0467 (1 HSPs)
scaffold0467 (23-125)||(10188-10288)
[»] scaffold0303 (1 HSPs)
scaffold0303 (51-125)||(4304-4378)
[»] scaffold0037 (1 HSPs)
scaffold0037 (51-125)||(95298-95372)
[»] scaffold0195 (1 HSPs)
scaffold0195 (96-155)||(19483-19543)
[»] scaffold0116 (1 HSPs)
scaffold0116 (19-125)||(338-442)
[»] scaffold0215 (2 HSPs)
scaffold0215 (51-125)||(9223-9297)
scaffold0215 (51-125)||(16121-16195)
[»] scaffold0516 (1 HSPs)
scaffold0516 (51-124)||(12002-12075)
[»] scaffold0761 (1 HSPs)
scaffold0761 (23-125)||(1424-1524)
[»] scaffold0615 (1 HSPs)
scaffold0615 (51-125)||(6068-6142)
[»] scaffold0574 (1 HSPs)
scaffold0574 (51-125)||(9370-9444)
[»] scaffold0361 (1 HSPs)
scaffold0361 (51-125)||(3505-3578)
[»] scaffold0183 (1 HSPs)
scaffold0183 (50-124)||(6905-6979)
[»] scaffold0383 (1 HSPs)
scaffold0383 (52-125)||(2700-2773)
[»] scaffold0017 (1 HSPs)
scaffold0017 (51-124)||(54182-54255)
[»] scaffold0529 (1 HSPs)
scaffold0529 (23-122)||(3271-3368)
[»] scaffold0034 (1 HSPs)
scaffold0034 (93-125)||(80187-80219)
[»] scaffold1500 (1 HSPs)
scaffold1500 (23-125)||(1363-1463)
[»] scaffold0369 (1 HSPs)
scaffold0369 (23-125)||(4029-4129)
[»] scaffold0026 (1 HSPs)
scaffold0026 (50-125)||(64395-64470)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-125)||(5061-5161)
[»] scaffold0387 (1 HSPs)
scaffold0387 (51-125)||(7053-7127)
[»] scaffold0367 (1 HSPs)
scaffold0367 (91-125)||(17207-17241)
[»] scaffold0049 (1 HSPs)
scaffold0049 (51-125)||(48504-48578)
[»] scaffold0003 (1 HSPs)
scaffold0003 (51-124)||(7517-7590)
[»] scaffold0892 (1 HSPs)
scaffold0892 (51-107)||(3743-3799)
[»] scaffold0013 (1 HSPs)
scaffold0013 (50-110)||(154305-154365)


Alignment Details
Target: scaffold0025 (Bit Score: 155; Significance: 2e-82; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 147030 - 146876
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  147030 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 146931  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146930 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 146876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 9261 - 9154
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||| | ||||||||| |||||||||    
T  9261 cttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagtgtgttagtcttcatcataatc 9162  T
Q  124 atcatcat 131  Q
    ||||||||    
T  9161 atcatcat 9154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 149081 - 149014
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaa-tcaagattggagtgagcttaggagctaaattgaa 67  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  149081 aagggttagagagaagagggagagcttgaagaactaaagattggagtgagcttaggagctaaagtgaa 149014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 148; Significance: 3e-78; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 172334 - 172179
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  172334 aagggttagagagaaaagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 172235  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtata 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172234 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtata 172179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 178037 - 177882
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  178037 aagggttagagagaaaagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 177938  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtata 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  177937 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtata 177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 164829 - 164903
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| ||| || | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  164829 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 164903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 122318 - 122164
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  122318 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaagagctaaattgaagtctaagttgggattaatctttatctaaggtaa 122219  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  122218 ggggattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 122164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 13246844 - 13246707
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246844 ggagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 13246745  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13246744 ataatcatcatcattttgtaaattttcaaatgttgtat 13246707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 15135836 - 15135939
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15135836 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 15135934  T
Q  121 atcat 125  Q
    |||||    
T  15135935 atcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 15272140 - 15272243
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15272140 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 15272238  T
Q  121 atcat 125  Q
    |||||    
T  15272239 atcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 15674940 - 15675047
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||    
T  15674940 cttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 15675039  T
Q  124 atcatcat 131  Q
    ||||||||    
T  15675040 atcatcat 15675047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 10104101 - 10104208
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||    
T  10104101 cttgaagaatcaagaattggagtgagcttaggagctaaagtaaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 10104200  T
Q  124 atcatcat 131  Q
    ||||||||    
T  10104201 atcatcat 10104208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 33241112 - 33241005
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| |||||||||||||||||| ||||  ||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||    
T  33241112 cttgaagaatcaagaattggagtgagcttaggagttaaagcgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 33241013  T
Q  124 atcatcat 131  Q
    ||||||||    
T  33241012 atcatcat 33241005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 55376420 - 55376525
Alignment:
Q  19 ggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    ||||| ||||||||| ||||| | | |||||||||||||||||||||||||||||||| || || ||| |||||||||||||||||||||||||| ||||    
T  55376420 ggagaacttgaagaaccaagaattgggtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaagggggttagtcttcatca 55376519  T
Q  119 taatca 124  Q
    ||||||    
T  55376520 taatca 55376525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 31132726 - 31132619
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||| |||||||||| ||||||||||||||||||||||| || ||||||||||| | |||||| | |||||||||||||||||||||||| ||||||||     
T  31132726 cttgtagaatcaagaattggagtgagcttaggagctaaagtggagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatt 31132627  T
Q  124 atcatcat 131  Q
    ||||||||    
T  31132626 atcatcat 31132619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 16608968 - 16609045
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  16608968 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 26680594 - 26680517
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  26680594 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 40885368 - 40885491
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaaga--ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggt 98  Q
    ||||||||||||||||||| |   ||||||||||||||   |||||||||   ||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  40885368 aagggttagagagaagaggaa---cttgaagaatcaaggatttggagtgaatctaggagctaaagtgaagcctaagtttggattaatcattatctaaggt 40885464  T
Q  99 aagggggttagtctttatcataatcat 125  Q
    |||||||||||  || |||||||||||    
T  40885465 aagggggttagaattcatcataatcat 40885491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 32460561 - 32460635
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  32460561 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 32460635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 16327795 - 16327872
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  16327795 agcttaggagctaaattgaagcctaggtttggcctaatcttcatataaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 54118168 - 54118230
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  54118168 taaggtaagggggttagtcttcatcataatcatcattattttgtgaattttcaaatgttgtat 54118230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 14500074 - 14500144
Alignment:
Q  55 gagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||| |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  14500074 gagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttaggcttcatcataatcat 14500144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 10488956 - 10488879
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||| |||| ||||||||| |||||||    
T  10488956 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaaggtggttggtctttatcttaatcat 10488879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 14952160 - 14952085
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  |||||||||||||||||||||||||||||||||||    
T  14952160 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 8045346 - 8045272
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||| ||||||| | ||||||| | | |||||||||||||||||||||| |||||||||||    
T  8045346 ttaggagctaaagtgaagtctaagtttgaattaatcataacctaaggtaagggggttagtcttcatcataatcat 8045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 13048090 - 13048160
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    |||||||||| |||||||||||||| ||| ||  ||||||| ||||||| |||||||||||||||||||||    
T  13048090 agcttaggagttaaattgaagcctaggtttggtctaatcttcatctaagttaagggggttagtctttatca 13048160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 20001107 - 20001030
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  20001107 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 20001030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 22738650 - 22738577
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||| ||||| ||||||||||    
T  22738650 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 22738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 26339403 - 26339327
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  26339403 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 26339327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 7131914 - 7132014
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   |||| |||||||||||  ||||||||||||||||||||  ||||||||||    
T  7131914 agcttgaggaatcaa--ttggggtaagattaggagctgaattgaagcaagagtttggattaatcttcttctaaggtaagggggttagttattatcataat 7132011  T
Q  123 cat 125  Q
    |||    
T  7132012 cat 7132014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 123
Target Start/End: Complemental strand, 18248599 - 18248527
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||| |||| |||||| ||||||  |||||||| | |||||||||||||||||||||  |||||||||||    
T  18248599 ttaggagttaaagtgaagcttaagttaagattaatcatcatctaaggtaagggggttagttattatcataatc 18248527  T

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Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 15287119 - 15287194
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  15287119 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15287194  T

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Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 15294228 - 15294303
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  15294228 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15294303  T

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Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 22351938 - 22352012
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  22351938 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 22352012  T

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Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 47358043 - 47357958
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||| || |||||||||||| |||||||||   ||||||| ||||||||  ||||||||||||||||||||  |||||| ||||||    
T  47358043 attggggtaagcttaggagctgaattgaagcaagagttggg-ttaatcttcttctaaggtaagggggttagttattatcacaatcat 47357958  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 14996545 - 14996445
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   |||| || ||||||||  | ||||||||||||||||||  ||||||||||    
T  14996545 agcttgaggaatcaa--ttggggtaagtttaggagctgaattgaagcaagagtttgggttaatcttcttttaaggtaagggggttagttattatcataat 14996448  T
Q  123 cat 125  Q
    |||    
T  14996447 cat 14996445  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 17145506 - 17145606
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||||    |||| |  ||||||||  ||||||||||||||||||||  ||||||||||    
T  17145506 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagtaagagtttgtgttaatcttcttctaaggtaagggggttagttattatcataat 17145603  T
Q  123 cat 125  Q
    |||    
T  17145604 cat 17145606  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 8378567 - 8378493
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| |||||| ||||||  |||||| | | ||||||||||||||| |||||  |||||||||||||    
T  8378567 ttaggagttaaagtgaagcttaagttaagattaaacatcatctaaggtaaggggattagttattatcataatcat 8378493  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 16523216 - 16523146
Alignment:
Q  55 gagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  16523216 gagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 16523146  T

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Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 19697236 - 19697310
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  19697236 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 19697310  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 19707821 - 19707895
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  19707821 ttaggaggtaaagtgaagcctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 19707895  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 52265312 - 52265435
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaa-gattgga-gtgagcttaggagctaaattgaagcctaagtt---gggattaatctttatctaa 95  Q
    ||||||||||||||||||| |   ||||||||||||| ||||||| | ||||| |||||||||||||||||||||| |   | ||||||||  |  ||||    
T  52265312 aagggttagagagaagaggaa---cttgaagaatcaaagattggaagagagct-aggagctaaattgaagcctaagctagggagattaatc--tgactaa 52265405  T
Q  96 ggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||  || |||||||||||    
T  52265406 ggtaagggggttagaattcatcataatcat 52265435  T

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Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 2050239 - 2050085
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2050239 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagtttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 2050140  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2050139 gggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtat 2050085  T

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Target: chr3; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 19260657 - 19260811
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19260657 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagattaagagctaaattgaagtctaagttgggattaatctttatctaaggtaa 19260756  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19260757 gggggttagtctttatcataatcatcatcattttgtaagttttcaaatgttgtat 19260811  T

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Target: chr3; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 12029980 - 12030135
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12029980 aagggttagagagaagagggagagcttgaagaactaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 12030079  T
Q  100 agggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||| || |||||||||||||||||||||||| || |||||||||||||||    
T  12030080 agggggttaatcattatcataatcatcatcattttgtgaaatttcaaatgttgtat 12030135  T

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Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17912306 - 17912430
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  17912306 aagggttaaagagaagagggagagcttgaagaatcaaggttggagtgagcttaggagctaaattgaagcctgaggtgggattaatctttatctaaggtaa 17912405  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||    
T  17912406 gggggttagtctttatcataatcat 17912430  T

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Target: chr3; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 38168362 - 38168237
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38168362 aagggttagagagaagagggagagcttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggta 38168263  T
Q  100 agggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||||    
T  38168262 agggggttagtctttatcataatcat 38168237  T

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Target: chr3; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30153389 - 30153265
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||    
T  30153389 aagggttagagagaagagggagagcttgaagaatcaagattggggtgagcttaggagctaaagagaagtctaagttgggattaatcttcatctaaggtaa 30153290  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||| ||||||||||||||    
T  30153289 gggggttagtttttatcataatcat 30153265  T

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Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 13839287 - 13839169
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt- 136  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||     
T  13839287 gattggagtgagcttaggagctaaattgaagcctaagtagggattactcttcatctaaggtaagggggttagtcttcatcataatcatcatcattttgtg 13839188  T
Q  137 aaattttcaaatgttgtat 155  Q
    |||||||||||||||||||    
T  13839187 aaattttcaaatgttgtat 13839169  T

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Target: chr3; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 53771468 - 53771365
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53771468 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 53771370  T
Q  121 atcat 125  Q
    |||||    
T  53771369 atcat 53771365  T

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Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 5240537 - 5240632
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaag 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  5240537 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 5240632  T

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Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 16261880 - 16261777
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16261880 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcata 16261782  T
Q  121 atcat 125  Q
    |||||    
T  16261781 atcat 16261777  T

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Target: chr3; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 33342305 - 33342204
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  33342305 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagagggttagtctttatcataatc 33342206  T
Q  124 at 125  Q
    ||    
T  33342205 at 33342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 11986009 - 11986112
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  11986009 agagtttgaagaatcaa-attggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcata 11986107  T
Q  121 atcat 125  Q
    |||||    
T  11986108 atcat 11986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 28558567 - 28558494
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  28558567 taggagcaaaattgaagcctaagttgggattaatctttatctaaggtaagagggttagtttttatcataatcat 28558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 54685132 - 54685233
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| ||||||||||  |||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||    
T  54685132 cttgaagaattaaggattggagtgaaattaggagctaaattgaagtctaagttgggattaatcttcatccaaggtaagtgggttagtctttatgataatc 54685231  T
Q  124 at 125  Q
    ||    
T  54685232 at 54685233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 14842433 - 14842549
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtaa 138  Q
    ||||| || |||||||||||| |||||||||   |||| || ||||||||  |||||||||||||||||||||||||||||||||||| ||| |||| ||    
T  14842433 attggggtaagcttaggagctgaattgaagcaagagttagggttaatcttcttctaaggtaagggggttagtctttatcataatcatcttcactttgcaa 14842532  T
Q  139 attttcaaatgttgtat 155  Q
    ||| |||||||||||||    
T  14842533 attctcaaatgttgtat 14842549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 2449107 - 2449184
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  2449107 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 2449184  T

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Target: chr3; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 13954756 - 13954836
Alignment:
Q  45 gtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||| |||||||||    
T  13954756 gtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcat 13954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 45861202 - 45861122
Alignment:
Q  45 gtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||| |||||||||    
T  45861202 gtgagcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcat 45861122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 14285363 - 14285289
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  14285363 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 15615214 - 15615137
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  15615214 agcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 15615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 54651867 - 54651764
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||| ||||| ||||||||||||||| |||||||||  ||||| || |||||| | |||||||||||||||||| ||||| ||||||    
T  54651867 agagcttgatgaatcaa-attggggtgagcttaggagcttaattgaagcaaaagtttgggttaatcatcatctaaggtaagggggtttgtcttcatcata 54651769  T
Q  121 atcat 125  Q
    |||||    
T  54651768 atcat 54651764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 19232121 - 19232058
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  19232121 taaggtaagggggttagtctttatcttaatcatcatcattttgtgaaattttcaaatgttgtat 19232058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 16744041 - 16744103
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16744041 taaggtaacgaggttagtctttaccataatcatcatcattttgtaaattttcaaatgttgtat 16744103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 23492773 - 23492696
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||||||   |||| || |||||||| ||||||||||||||||||||||||||||||||||||    
T  23492773 agcttaggagctgaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtctttatcataatcat 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 51960990 - 51961063
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||| |||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  51960990 taggaggtaaagtgaagtctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 19947100 - 19947026
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  19947100 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 11477053 - 11477127
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||| | ||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  11477053 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcttcataatcat 11477127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 8268605 - 8268682
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  8268605 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8268682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 8275705 - 8275782
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  8275705 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8275782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 16933827 - 16933901
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | ||||||||||||||||||||||||||||||||||    
T  16933827 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 18896893 - 18896993
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| || ||||||||  || |||||||||||||||||  ||||||||||    
T  18896893 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttccaaggtaagggggttagttattatcataat 18896990  T
Q  123 cat 125  Q
    |||    
T  18896991 cat 18896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 18911400 - 18911300
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  18911400 agcttgaggaatcaa--ttggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataat 18911303  T
Q  123 cat 125  Q
    |||    
T  18911302 cat 18911300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 25059146 - 25059046
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||  || || || ||||||||  || |||||||||||||||||  ||||||||||    
T  25059146 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaaaaattagggttaatcttcttcaaaggtaagggggttagttattatcataat 25059049  T
Q  123 cat 125  Q
    |||    
T  25059048 cat 25059046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 8632231 - 8632111
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attgga-gtgagcttaggagctaaattgaagcctaagtt-gggattaatctttatctaagg 97  Q
    ||||||||||||||||||| |   |||||||||||||| |||||  | ||||| |||||| ||||||||||||||| | ||||||| |||  ||||||||    
T  8632231 aagggttagagagaagaggaa---cttgaagaatcaaggattgggtgagagct-aggagcaaaattgaagcctaagctagggattactct--atctaagg 8632138  T
Q  98 taagggggttagtctttatcataatca 124  Q
    ||||||||||||  || ||||||||||    
T  8632137 taagggggttaggattcatcataatca 8632111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 12264668 - 12264741
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||  | ||||||||||||| |  || |||||||||||||||||  |||||||||||||    
T  12264668 taggagctgaattgaagcaaaggttgggattaatcatcttcaaaggtaagggggttagttattatcataatcat 12264741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 54037930 - 54037963
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  54037930 aagggttagagagaagagggagagcttgaagaat 54037963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 17955884 - 17955916
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||||||||    
T  17955884 taaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 5228719 - 5228619
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||| |   |||| || ||||||||  ||||||||||||||||||||  | ||||||||    
T  5228719 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataat 5228622  T
Q  123 cat 125  Q
    |||    
T  5228621 cat 5228619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 15468189 - 15468289
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   | || || ||||||||  || |||||||||||||||||  ||||||||||    
T  15468189 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataat 15468286  T
Q  123 cat 125  Q
    |||    
T  15468287 cat 15468289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 15857163 - 15857198
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcat 128  Q
    ||||||||||||||||||||| ||||||||||||||    
T  15857163 taaggtaagggggttagtcttcatcataatcatcat 15857198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 40939570 - 40939446
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attgg-agtgagcttaggagctaaattgaagcctaagtt---gggattaatctttatctaa 95  Q
    ||||||||||||||||  ||||| |||||||||||||| ||||| || ||||| |||||| ||||||||||||||| |   | ||||||  | || ||||    
T  40939570 aagggttagagagaag--ggagaacttgaagaatcaaggattgggagagagct-aggagcaaaattgaagcctaagctagggagattaa--tataactaa 40939476  T
Q  96 ggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||  || |||||||||||    
T  40939475 ggtaagggggttagaattcatcataatcat 40939446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 44229366 - 44229293
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||| |||| |||| ||||||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  44229366 ttaggagataaagtgaaacctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 44229293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 2844546 - 2844514
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  2844546 taaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 3992905 - 3992873
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  3992905 taaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 54038024 - 54038056
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  54038024 taaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 55513225 - 55513193
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  55513225 taaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 1554 - 1399
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  1554 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgtgattaatctttatctaaggtaa 1455  T
Q  101 gggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1454 gggggttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtat 1399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 3416 - 3570
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3416 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 3515  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||    
T  3516 gggggttagtctttgtcataatcatcttcattttgtaaattttcaaaagttgtat 3570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 272454 - 272299
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  272454 aagggttagagagaagagggagagcttaaagaatcaagattggagtgagctcaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 272355  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtata 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  272354 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatattgtata 272299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 36053092 - 36052941
Alignment:
Q  4 ggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaaggg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36053092 ggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaaggg 36052993  T
Q  104 ggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  36052992 ggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtat 36052941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 16212195 - 16212041
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16212195 aagggttagagagaagagggagagtttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaa 16212096  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  16212095 gggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtat 16212041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 13036863 - 13037000
Alignment:
Q  19 ggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  13036863 ggagaacttgaagaatcaaggattggagtaagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcacc 13036962  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13036963 ataatcatcatcattttgtaaattttcaaatgttgtat 13037000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 11580586 - 11580724
Alignment:
Q  19 ggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11580586 ggagaacttgaagaatcaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatcttaatctaaggtaaggggattagtctttatc 11580685  T
Q  118 ataatcatcatca-ttttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  11580686 ataatcatcatcatttttgtaaattttcaaatgttgtat 11580724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 3050030 - 3049905
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3050030 aagggttagagagaagagggagagcttgaagaattaaggattggagtgaacttaagagctaaattgaagcctaagttgggattaatctttatctaaggta 3049931  T
Q  100 agggggttagtctttatcataatcat 125  Q
    ||||||||||| ||||||||||||||    
T  3049930 agggggttagtttttatcataatcat 3049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25124574 - 25124450
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||    
T  25124574 aaggattagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagtttagattaatcattatctaaggtaa 25124475  T
Q  101 gggggttagtctttatcataatcat 125  Q
    ||||||||||||| |||||||||||    
T  25124474 gggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 17817268 - 17817363
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaag 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  17817268 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 17817363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19049733 - 19049638
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaag 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  19049733 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttacgagctaaattgaagcctaagttgggattaatcttcatctaag 19049638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 42056117 - 42056220
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    |||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42056117 agagcttgagtaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 42056215  T
Q  121 atcat 125  Q
    |||||    
T  42056216 atcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 2029330 - 2029244
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2029330 attggagtgaacttaggagctaaattgaagcctaagttggaattaatctttatctaaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 2190014 - 2190117
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2190014 agagcttgaggaatcaagattgg-gtgagcttaggagttaaagtgaagcctaagttgggattaatctttatctaaggtaaggcggttagtttttatcata 2190112  T
Q  121 atcat 125  Q
    |||||    
T  2190113 atcat 2190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 13321437 - 13321334
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||||||||||| ||||| || ||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  13321437 agagcttgaagaatcaa-attggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaaggtaagggggttagtcttcatcata 13321339  T
Q  121 atcat 125  Q
    |||||    
T  13321338 atcat 13321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 15709570 - 15709463
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||| || |||||||| |||||||||    
T  15709570 cttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagaggattagtcttcatcataatc 15709471  T
Q  124 atcatcat 131  Q
    ||||||||    
T  15709470 atcatcat 15709463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15516669 - 15516793
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||| |||||||||   |||| || |||||| |  || || ||||    
T  15516669 aagggttagagagaagagggagagcttgaagaatcaagattggggtaagtctaggagctgaattgaagcaagagttagggttaatcatcttcaaatgtaa 15516768  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||    
T  15516769 gggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 36024554 - 36024446
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaag-ggggttagtctttatcataat 122  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||| | |||||| | |||||||||||| |||||||||||| ||||||||    
T  36024554 cttgaagaatcaagaattggagtgagcttatgagctaaagtgaagcctaagttgaggttaatcataatctaaggtaaggggggttagtcttcatcataat 36024455  T
Q  123 catcatcat 131  Q
    |||||||||    
T  36024454 catcatcat 36024446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 7293410 - 7293333
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  7293410 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 11516621 - 11516544
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  11516621 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 15441433 - 15441510
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  15441433 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 30261998 - 30262075
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  30261998 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 47480902 - 47480976
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  47480902 ttaggaggtaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 47480976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 3060302 - 3060245
Alignment:
Q  94 aaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgtt 151  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3060302 aaggtaagggggtaagtctttatcataatcatcatcattttgtaaattttcaaatgtt 3060245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 14113858 - 14113935
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  14113858 agcttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 25292207 - 25292283
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||| |||||||||||||||||||||||||||    
T  25292207 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatcataatca 25292283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 14423509 - 14423585
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||| |||||||||||||    
T  14423509 agcttagaagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtc-ttatcataatcat 14423585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 10000245 - 10000318
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||| ||||| ||||||||||    
T  10000245 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgtcttcatcataatca 10000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 13758754 - 13758677
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  13758754 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 13758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 371491 - 371417
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  371491 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 48622541 - 48622614
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  48622541 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 48622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 15927950 - 15927875
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  15927950 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 15927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 18979895 - 18979970
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  18979895 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 18979970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 295849 - 295932
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatcta-aggtaagggggttagtctttatcataatcatcatcatttt 134  Q
    ||||||||||||||||||   ||||||||||||||||||  ||| ||||||||||||| ||||| | ||||||  ||||||||||    
T  295849 ttaggagctaaattgaagtacaagttgggattaatcttt-gctagaggtaagggggtttgtcttcaacataattctcatcatttt 295932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 13573056 - 13572981
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||| ||||||    
T  13573056 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 13572981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 15759963 - 15760063
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| |  ||||||||  ||||||||||||||||||||  | ||||||||    
T  15759963 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataat 15760060  T
Q  123 cat 125  Q
    |||    
T  15760061 cat 15760063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 15950667 - 15950740
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||   |||| || ||||||||  || |||||||||||||||||  |||||||||||||    
T  15950667 taggagctgaattgaagcaagagtttgggttaatcttcttcaaaggtaagggggttagttattatcataatcat 15950740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 16418878 - 16418805
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||| | ||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  16418878 ttaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 16418805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32493852 - 32493885
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaat 34  Q
    |||||||||||||||||| |||||||||||||||    
T  32493852 aagggttagagagaagagtgagagcttgaagaat 32493885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 126770 - 126738
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  126770 taaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 32493946 - 32493978
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  32493946 taaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 43373300 - 43373454
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43373300 aagggttaaagagaagaaggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 43373399  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  43373400 gggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtat 43373454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 24928624 - 24928779
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24928624 aagggttagagagaagagggagatcttgaagaatcaagattggagtgagcttaggagctaaattgaagtctaagttgggattaatctttatctaaggtaa 24928723  T
Q  101 gggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtat 155  Q
     ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  24928724 tggggttagtctttatcataatcatcgtcattttgtgaaattttcaaatgttgtat 24928779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 16193552 - 16193704
Alignment:
Q  2 agggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaag 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  16193552 agggttagagagaagagggagagcttaaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattcatctttatctaaggtaa- 16193650  T
Q  102 ggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  16193651 ggggttagtctttatcataatcatcatcatttggtaaattttcaaatattgtat 16193704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 24385560 - 24385684
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  24385560 aagggttggagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatcttcatctaaggtaa 24385659  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||    
T  24385660 gggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 41506634 - 41506741
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||||||| || |||    
T  41506634 ggagaacttgaagaatcaagaattggggtgagcttaagagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatc 41506733  T
Q  118 ataatcat 125  Q
    ||||||||    
T  41506734 ataatcat 41506741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 7000445 - 7000551
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||| || |||||| |||||||| |||||||||||||| || |||    
T  7000445 ggagaacttgtagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaagtaagggggttagttttcatc 7000544  T
Q  118 ataatca 124  Q
    |||||||    
T  7000545 ataatca 7000551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 5238481 - 5238404
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  5238481 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 5238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 22907083 - 22907160
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  22907083 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 22907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 24661117 - 24661194
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  24661117 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 24661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 43685940 - 43685863
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  43685940 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 21494314 - 21494388
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  21494314 ttaggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 21494388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 22886728 - 22886654
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| |||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  22886728 ttaggagctaaagtgaagcttaagtttggattaatcattacctaaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 16404900 - 16404961
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  16404900 taaggtaagggggttagtcttcatcataatcatcatta-tttgtaaattttcaaatgttgtat 16404961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 3431134 - 3431208
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| ||||| ||| | | |||||||||||||||||||||| |||||||||||    
T  3431134 ttaggagctaaagtgaagcccaagtttggattgatcataacctaaggtaagggggttagtcttcatcataatcat 3431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 2545339 - 2545265
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| ||| || | ||||||| | | |||||||||||||||||||||| |||||||||||    
T  2545339 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtcttcatcataatcat 2545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 17345973 - 17345887
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||| || |||||||||||| |||||||||   |||| || ||||||||  ||| ||||||||||||||||||| |||||||||||    
T  17345973 attggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttcttaggtaagggggttagtcttcatcataatcat 17345887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 16872923 - 16873000
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| |  ||||||||  ||||||||||||||||||||  |||||||||||||    
T  16872923 agcttaggagctaaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatcat 16873000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 13662114 - 13662214
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  13662114 agcttgaggaatcaa--ttggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataat 13662211  T
Q  123 cat 125  Q
    |||    
T  13662212 cat 13662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 13720777 - 13720877
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  13720777 agcttgaggaatcaa--ttggggtaagattaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataat 13720874  T
Q  123 cat 125  Q
    |||    
T  13720875 cat 13720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 24716762 - 24716794
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||||||||    
T  24716762 taaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 22006107 - 22006207
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| |  ||||||||  || |||||||||||||||||  ||||||||||    
T  22006107 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgagttaatcttcttcaaaggtaagggggttagttattatcataat 22006204  T
Q  123 cat 125  Q
    |||    
T  22006205 cat 22006207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 16038744 - 16038818
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||  ||||| | ||| ||| | | |||||||||||||||| ||||| |||||||||||    
T  16038744 ttaggagctaaagtgaagctcaagtttgaattgatcataacctaaggtaagggggtttgtcttcatcataatcat 16038818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 274798 - 274766
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  274798 taaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 641051 - 641083
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  641051 taaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 826857 - 826889
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  826857 taaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9307 - 9154
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9307 aagggttagagagaatagggagagcttgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 9208  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgta 154  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||    
T  9207 gggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgta 9154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 36742 - 36899
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaat---tgaagcctaagttgggattaatctttatctaagg 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||    
T  36742 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaagaagtgaagcctaagttgggattaatctttatttaagg 36841  T
Q  98 taagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  36842 taagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtat 36899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 128007 - 128157
Alignment:
Q  5 gttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  128007 gttagagagaagagggagagcttgaagaatcaagattggagtgagattaggagataaaatgaagcctaagttgggattaatctttatctaaggtaagggg 128106  T
Q  105 gttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  128107 gttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtat 128157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 9e-66; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 20913459 - 20913305
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20913459 aagggttagagagaagagggagaaattgaagaatcaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 20913360  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||    
T  20913359 gggggttagtctttatcgtaatcatcctcattttgcaaattttcaattgttgtat 20913305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 20931774 - 20931620
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  20931774 aagggttagagagaagagggagagcttgaataatcaagattggagtgagcttagcagctaaagtgaagcctaagttgggattaatctttatctaaggtaa 20931675  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||| ||||||||    
T  20931674 gggggttagcctttatcataatcatcctcattttgcaaattttcaattgttgtat 20931620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 20893476 - 20893612
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  20893476 ggagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatc 20893575  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  20893576 ataatcatcatcattttgt-aattttcaaatgttgtat 20893612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 37844319 - 37844436
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgta 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37844319 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatttttatctaaggtaagggggttagtctttatcataatcatcatcattttgtg 37844418  T
Q  138 aattttcaaatgttgtat 155  Q
    ||||||||||||||||||    
T  37844419 aattttcaaatgttgtat 37844436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 20446074 - 20445956
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt- 136  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  20446074 gattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggagttagtctttatcataatcatcatcattttgtg 20445975  T
Q  137 aaattttcaaatgttgtat 155  Q
    |||||||||||||||||||    
T  20445974 aaattttcaaatgttgtat 20445956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 20531838 - 20531721
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgta 137  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||     
T  20531838 gattggagtgagcttaggagataaattgaagcctaagttgggattaatctttatctaaggtaaggaaattagtctttatcataatcatcatcattttgtg 20531739  T
Q  138 aattttcaaatgttgtat 155  Q
    ||||||||||||||||||    
T  20531738 aattttcaaatgttgtat 20531721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 41394559 - 41394497
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41394559 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 41394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 45051803 - 45051726
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  45051803 agcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 45051726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 51452886 - 51452809
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||| |||||||    
T  51452886 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcttaatcat 51452809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Original strand, 7640806 - 7640882
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  7640806 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 7640882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 2116635 - 2116558
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||| |||||||||||||||||| ||| ||  ||||||| || |||||||| |||||||||  |||||||||||||    
T  2116635 agcttatgagctaaattgaagcctaggtttggtctaatcttcatttaaggtaaaggggttagtgattatcataatcat 2116558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 22035831 - 22035755
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  22035831 agcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 22035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9783870 - 9783990
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attgga-gtgagcttaggagctaaattgaagcctaagtt-gggattaatctttatctaagg 97  Q
    ||||||||||||||||||| |   |||||||||||||| |||||  | ||||| |||||| ||||||||||||||| | ||||||| |||  ||||||||    
T  9783870 aagggttagagagaagaggaa---cttgaagaatcaaggattgggtgagagct-aggagcaaaattgaagcctaagctagggattactct--atctaagg 9783963  T
Q  98 taagggggttagtctttatcataatca 124  Q
    ||||||||||||  || ||||||||||    
T  9783964 taagggggttagaattcatcataatca 9783990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 15861285 - 15861358
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||   |||| || |||||| |  || ||||||||||||||||||||||||||||||||    
T  15861285 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 46523772 - 46523695
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||| ||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  46523772 agcttaggagataaattaaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 46523695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 22228213 - 22228115
Alignment:
Q  25 cttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||||  |||| || |||||| ||||| |||||||||   |||| || |||||| |  || |||||||||||||||||  ||||||||||||    
T  22228213 cttgaagaatcaa--ttggggtaagcttaagagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatca 22228116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 18598849 - 18598908
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagt 110  Q
    |||||||||| |||||||||   ||||||| ||||||||  ||||||||||||||||||||    
T  18598849 cttaggagctgaattgaagcaagagttggg-ttaatcttcttctaaggtaagggggttagt 18598908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 21860366 - 21860334
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  21860366 taaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 44034871 - 44034903
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  44034871 taaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 119; Significance: 5e-61; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 49027 - 48873
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||  |||| | | ||| |||||||||    
T  49027 aagggttagagagaagagggagagattgaagaatcaagattggagtgagcttaggagctaaagtaaagcctaagtttagattgagcattacctaaggtaa 48928  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48927 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 48873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 153856 - 153956
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| |  ||||||||  ||||||||||||||||||||  ||||||||||    
T  153856 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataat 153953  T
Q  123 cat 125  Q
    |||    
T  153954 cat 153956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 61121 - 61154
Alignment:
Q  92 ctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||| |||||||||||    
T  61121 ctaaggtaagggggttagtcttcatcataatcat 61154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 2e-60; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 27182396 - 27182533
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  27182396 ggagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatc 27182495  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27182496 ataatcatcatcattttgtaaattttcaaatgttgtat 27182533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21205372 - 21205249
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||    
T  21205372 aagggttagagagaagtgggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttggaattaatcttcatctaagataa 21205273  T
Q  101 gggggttagtctttatcataatcat 125  Q
     ||| ||||||||||||||||||||    
T  21205272 -gggattagtctttatcataatcat 21205249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 18530919 - 18531053
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataa-- 121  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||      
T  18530919 cttgaagaatcaagaattggagtgagcttaggagctaaagtgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 18531018  T
Q  122 -tcatcatcattttgtaaattttcaaatgttgtat 155  Q
     |||||||||||||| || ||||||||||| ||||    
T  18531019 gtcatcatcattttgcaatttttcaaatgtggtat 18531053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 23507347 - 23507240
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaa 147  Q
    |||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||    
T  23507347 agcttaggagttaaagtgaagcataagttggaattaatctttatctaaggtaagggggttagtctttatcataatcatctccattttgtaagatttcaaa 23507248  T
Q  148 tgttgtat 155  Q
    ||||||||    
T  23507247 tgttgtat 23507240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 21651119 - 21651018
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  21651119 cttgaagaattaaggattggagtgagcttaggagctaaattgaagtctaagttgggattaatcttcatctaaggtaagggggttaatatttatcataatc 21651020  T
Q  124 at 125  Q
    ||    
T  21651019 at 21651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 108657 - 108760
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    |||||| || ||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  108657 agagctcgaggaatcaagatttg-gtgagcttaggaggtaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatcata 108755  T
Q  121 atcat 125  Q
    |||||    
T  108756 atcat 108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 23981330 - 23981442
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||    
T  23981330 ggagatcttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttggattaatcttcatcttaggtaagggggttagtcttcatc 23981429  T
Q  118 ataatcatcatca 130  Q
    | |||||| ||||    
T  23981430 aaaatcataatca 23981442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 2032240 - 2032135
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||| || |||    
T  2032240 ggagaacttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagttttcatc 2032141  T
Q  118 ataatc 123  Q
    ||||||    
T  2032140 ataatc 2032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 22053684 - 22053791
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||| |||||||| | |||||| | |||||||||||||||||||||||| |||||||||    
T  22053684 cttgaagaatcaagaattgaagtgagcttaggagctaaagtgaagtctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 22053783  T
Q  124 atcatcat 131  Q
    ||||||||    
T  22053784 atcatcat 22053791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 25005238 - 25005137
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| |||||||||   ||||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||||    
T  25005238 cttgaagaatcaagaattggagtgaatctaggagctaaagtgaagcctaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatc 25005139  T
Q  124 at 125  Q
    ||    
T  25005138 at 25005137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 32951115 - 32951016
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||| ||||||| | ||||||| |||| ||||||||||||||||||||| ||||||    
T  32951115 agagcttgaagaatcaa-attggggtaagcttaggagctaaattgaagtctaagtttgaattaatcattatttaaggtaagggggttagtcttcatcata 32951017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 20623363 - 20623286
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  20623363 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 21233397 - 21233474
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  21233397 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 37053138 - 37053061
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  37053138 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 16536591 - 16536514
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||| ||||||||||||||||||||||||||||    
T  16536591 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaagataagggggttagtctttatcataatcat 16536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 25900275 - 25900352
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||| ||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  25900275 agcttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 7529299 - 7529228
Alignment:
Q  54 ggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  7529299 ggagctaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcttcataatcat 7529228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 1219392 - 1219469
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  1219392 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcat 1219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 35790945 - 35791047
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| |||||||  |||| || |||||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||    
T  35790945 agagcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcata 35791042  T
Q  121 atcat 125  Q
    |||||    
T  35791043 atcat 35791047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 23328941 - 23328865
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  23328941 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 23328865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 24616545 - 24616469
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  24616545 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 24616469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 24712921 - 24712845
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  24712921 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 24712845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 24745939 - 24745863
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  24745939 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 24745863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 9730236 - 9730310
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| |||||||||||    
T  9730236 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcatcataatcat 9730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 17909897 - 17909823
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||| ||||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  17909897 ttaggagttaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtgttcttcataatcat 17909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 16106040 - 16105967
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||   ||||  | ||||||||  |||||||||||||||||||||||||||||||||||    
T  16106040 taggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 7425706 - 7425631
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  7425706 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 7425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 11211913 - 11212014
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||||||||||| ||||| || |||| ||||||| |||||||||   |||| || |||||| |  || |||||||||||||||||  ||||||||||    
T  11211913 agcttgaagaatcaaaattggggtaagct-aggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataat 11212011  T
Q  123 cat 125  Q
    |||    
T  11212012 cat 11212014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 23514954 - 23514868
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||| || |||||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  | |||||||||||    
T  23514954 attggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcat 23514868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 11343081 - 11343008
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||  | ||| || ||||||||  || ||||||||||||||||| ||||||||||||||    
T  11343081 taggagctgaattgaagcagaggttagggttaatcttcttcaaaggtaagggggttagtttttatcataatcat 11343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 27010221 - 27010146
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||| ||||||    
T  27010221 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 27010146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 34939669 - 34939595
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||| ||||||  | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  34939669 ttaggagctaaagtgaagtctaagtgtgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 34939595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 8e-60; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 23148409 - 23148273
Alignment:
Q  20 gagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23148409 gagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatca 23148310  T
Q  119 taatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||    
T  23148309 taatcatcatcattttgtaaattttcaaatgttgtat 23148273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 23153860 - 23153724
Alignment:
Q  20 gagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23153860 gagaacttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcatca 23153761  T
Q  119 taatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||    
T  23153760 taatcatcatcattttgtaaattttcaaatgttgtat 23153724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 23995350 - 23995247
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23995350 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 23995252  T
Q  121 atcat 125  Q
    |||||    
T  23995251 atcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 27751849 - 27751742
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  27751849 ggagaacttgaagaatcaagaattggggtgagcttaggagctaaattgaagcctaagtttggattaatctttatctaaggtaagggggttagtcttcatc 27751750  T
Q  118 ataatcat 125  Q
    ||||||||    
T  27751749 ataatcat 27751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 26090172 - 26090059
Alignment:
Q  12 agaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtc 111  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  |||| | | ||| ||||||||||||||||||||    
T  26090172 agaagagggagagcttgaagaatcaagattggagtgaggttaggagctaaagtgaagcctaagtttagattgagcattacctaaggtaagggggttagtc 26090073  T
Q  112 tttatcataatcat 125  Q
    ||||||||||||||    
T  26090072 tttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 29666284 - 29666181
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||  |||| ||||||||||| ||||||    
T  29666284 agagcttgaagaatcaa-attggggtgagcttaggagctaaattgaagcctaagtttggattaatcattatctaacataagtgggttagtcttcatcata 29666186  T
Q  121 atcat 125  Q
    |||||    
T  29666185 atcat 29666181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 15742078 - 15742150
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  15742078 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 32276617 - 32276691
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  32276617 ttaggagctaaagtgaagcttaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 1649976 - 1650053
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  1649976 agcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 1650053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 35009283 - 35009384
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| |||| ||||   || |||||||| ||||||| ||||| ||||||||| |||||||| ||||||||||||||||| |||||||||    
T  35009283 cttgaagaatcaagaattggggtgaatctaagagctaaagtgaagccaaagtttggattaatcattatctaaagtaagggggttagtcttcatcataatc 35009382  T
Q  124 at 125  Q
    ||    
T  35009383 at 35009384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 16299844 - 16299906
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctt 113  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  16299844 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtctt 16299906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 18002353 - 18002427
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||| |||||||  |||||||| | | ||||||||||||||||||||||||||||||||||    
T  18002353 ttaggagctaaagtgaaggctaagtttagattaatcataacctaaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 18823241 - 18823315
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||  |||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  18823241 ttaggagctaaagtgaagtttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 18823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 18839096 - 18839170
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||| ||||||| |||||| |||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  18839096 ttagaagctaaagtgaagcttaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 18839170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 19610427 - 19610325
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| |||||||  |||| || |||||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||    
T  19610427 agagcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcata 19610330  T
Q  121 atcat 125  Q
    |||||    
T  19610329 atcat 19610325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 1657593 - 1657693
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||| |   |||| || ||||||||  ||||||||||||||||||||||| ||||||||    
T  1657593 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataat 1657690  T
Q  123 cat 125  Q
    |||    
T  1657691 cat 1657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 15862889 - 15862789
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||| | |||||||||   |||| || ||||||||  ||||||||||||||||||||||| ||||||||    
T  15862889 agcttgaggaatcaa--ttggggtaagcttaggaggtgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtcttcatcataat 15862792  T
Q  123 cat 125  Q
    |||    
T  15862791 cat 15862789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 23978153 - 23978076
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||| ||||||  |||||||||||||    
T  23978153 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggcgttagttattatcataatcat 23978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 16232274 - 16232199
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  16232274 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 16232199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 13620669 - 13620743
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||||| |||| | ||| ||| | | ||||||||||||||||||||||  ||||||||||    
T  13620669 ttaggagctaaagtgaagcctgagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 13620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 1556412 - 1556312
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| |  ||||||||  ||||||||||||||||||||  | ||||||||    
T  1556412 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataat 1556315  T
Q  123 cat 125  Q
    |||    
T  1556314 cat 1556312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 4991427 - 4991396
Alignment:
Q  94 aaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 29869650 - 29869724
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||| |||||||||   |||| || || |||||  ||||||||||||||||||||  ||||||||||||    
T  29869650 cttaggagctgaattgaagcaagagtttgggttgatcttcttctaaggtaagggggttagttattatcataatca 29869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 18086697 - 18086757
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagt 110  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||    
T  18086697 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagt 18086757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 19983192 - 19983224
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  19983192 taaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Original strand, 35015057 - 35015089
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||| ||||||||||||||    
T  35015057 taaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 114; Significance: 5e-58; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 107633 - 107770
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  107633 ggagaacttgaagaatcaagaattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatc 107732  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    || |||||||||||||||||||||||||||||||||||    
T  107733 atgatcatcatcattttgtaaattttcaaatgttgtat 107770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 89303 - 89436
Alignment:
Q  19 ggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  89303 ggagaacttgaagaatcaagaattggagtgagcttaggagttaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtcttcatc 89402  T
Q  118 ataatcatcatcattttgtaaattttcaaatgtt 151  Q
    || |||||||||||||||||||||||||||||||    
T  89403 atgatcatcatcattttgtaaattttcaaatgtt 89436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 130911 - 130880
Alignment:
Q  94 aaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 5e-58; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 22863342 - 22863205
Alignment:
Q  19 ggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 117  Q
    ||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22863342 ggagaacttgaagaatcaaggattggggtgagcttaggagctaaattgcagcctaagttgggattaatctttatctaaggtaagggggttagtctttatc 22863243  T
Q  118 ataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  22863242 ataatcatcatcattttgtaaattttcaattgttgtat 22863205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 463156 - 463013
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    ||||||||||||| ||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  463156 aagggttagagaggagagggagagcttgaagaat-----------tgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 463068  T
Q  101 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  463067 gggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 463013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 38 - 155
Target Start/End: Complemental strand, 8891636 - 8891519
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgta 137  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8891636 gattggagtgagcttaggaactaaattgaagcctaagttgggattaatctttatctaaggtaaaggggttagtctttatcataatcatcatcattttgta 8891537  T
Q  138 aattttcaaatgttgtat 155  Q
    ||||||||||||||||||    
T  8891536 aattttcaaatgttgtat 8891519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 36982309 - 36982427
Alignment:
Q  38 gattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatca-ttttgt 136  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36982309 gattggagtgagctgaggagctaaattgaagcctaagttggtattagtctttatctaaggtaagggggttagtctttatcataatcatcatcatttttgt 36982408  T
Q  137 aaattttcaaatgttgtat 155  Q
    |||||||||||||||||||    
T  36982409 aaattttcaaatgttgtat 36982427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 9652727 - 9652828
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9652727 cttgaagaattaaggattggagtgaacttaggagctaaattgaaacctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 9652826  T
Q  124 at 125  Q
    ||    
T  9652827 at 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 21273878 - 21273980
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21273878 agagcttgaggaatcaagattgg-gtgagcttatgagctaaagtgaagcctaagttgggattaatctttatctaaggtaa-ggggttagtctttatcata 21273975  T
Q  121 atcat 125  Q
    |||||    
T  21273976 atcat 21273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 24341240 - 24341347
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||    
T  24341240 cttgaagcatcaagaattggagtgagcttaggagctaaaatgaagcctaagttgaggttaatcataatctaaggtaagggggttagtcttcatcataatc 24341339  T
Q  124 atcatcat 131  Q
    ||||||||    
T  24341340 atcatcat 24341347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 25265232 - 25265335
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||||||||||| ||||| || ||||||||||||||| ||||||||| ||| ||||||||| |||||||| ||||||||||||||||| ||||||    
T  25265232 agagcttgaagaatcaa-attggggtaagcttaggagctaaagtgaagcctaggtttggattaatcattatctaatgtaagggggttagtcttcatcata 25265330  T
Q  121 atcat 125  Q
    |||||    
T  25265331 atcat 25265335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 14906309 - 14906386
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  14906309 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 23820465 - 23820388
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  23820465 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 32466281 - 32466177
Alignment:
Q  19 ggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    ||||| ||||||||| ||||| | | |||||||||||||||||||||||||||||||| || || ||| ||||||||||||| |||||||||||| ||||    
T  32466281 ggagaacttgaagaaccaagaattgggtgagcttaggagctaaattgaagcctaagtttgggttgatccttatctaaggtaa-ggggttagtcttcatca 32466183  T
Q  119 taatca 124  Q
    ||||||    
T  32466182 taatca 32466177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 19689270 - 19689347
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| || |||||||||||||||||||||||||||||||||    
T  19689270 agcttaggagctaaattgaagcctaggtttggtctaatcttcatttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 17396519 - 17396599
Alignment:
Q  45 gtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||| ||||||| ||| ||  ||||||| |||||||||||||||||||||||||| |||||||||    
T  17396519 gtgagcttaggagctaaattaaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcat 17396599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 20015403 - 20015328
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||||||| |||||    
T  20015403 cttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcatgatcat 20015328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 33128446 - 33128372
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| | | |||||||||||||||||||||| |||||||||||    
T  33128446 ttaggagctaaagtgaagcctaagtttggattaatcataacctaaggtaagggggttagtcttcatcataatcat 33128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 43642881 - 43642943
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43642881 taagggaaggaggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtat 43642943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 20627238 - 20627301
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgt-aaattttcaaatgttgtat 155  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20627238 taaggtaacggggttagtctttatcataatcatcatcattttgtaaaattttcaaatattgtat 20627301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 19794629 - 19794690
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  19794629 taaggtaagggggttagtcttcatcataatcatcattattttgtaaa-tttcaaatgttgtat 19794690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 28031092 - 28031166
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||| |||||||||||    
T  28031092 ttaggagttaaagtgaagcctaagtttgaattaatcattacctaaggtaagggggttagtcttcatcataatcat 28031166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 12641514 - 12641591
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || |||||||| |||||||||||||||||||||  |||||||||||||    
T  12641514 agcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagttattatcataatcat 12641591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 8944230 - 8944153
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  8944230 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 8944153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 12635740 - 12635817
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  12635740 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 12635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 12728776 - 12728699
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  12728776 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 12728699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 34824859 - 34824782
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  34824859 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcat 34824782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 124
Target Start/End: Complemental strand, 23774520 - 23774444
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    ||||||||||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  23774520 agcttaggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 23774444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 17204733 - 17204659
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||| |||| ||||| ||||||| ||||||||| | | |||| ||||||||||||||||| |||||||||||    
T  17204733 ttaggagttaaagtgaagtctaagtttggattaatcataacctaaagtaagggggttagtcttcatcataatcat 17204659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 3798475 - 3798552
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||| |||||||||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  3798475 agcttatgagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 3798552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 21142276 - 21142203
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  21142276 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 21142203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 16936000 - 16935900
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||||    |||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  16936000 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataat 16935903  T
Q  123 cat 125  Q
    |||    
T  16935902 cat 16935900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 17006660 - 17006560
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||||    |||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  17006660 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataat 17006563  T
Q  123 cat 125  Q
    |||    
T  17006562 cat 17006560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 22579689 - 22579789
Alignment:
Q  25 cttgaagaatcaagattgga-gtgagcttaggagctaaattgaagcctaagtt---gggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    |||||||||||||||||||| | ||||| |||||||||||||||||||||| |   | ||||||  |||| ||||||||||||||||||  || ||||||    
T  22579689 cttgaagaatcaagattggaagagagct-aggagctaaattgaagcctaagctagggagattaa--tttaactaaggtaagggggttagaattcatcata 22579785  T
Q  121 atca 124  Q
    ||||    
T  22579786 atca 22579789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 5888505 - 5888578
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||| ||||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  5888505 ttaggagctaaagtgaagcttaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 5888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22275171 - 22275138
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaat 34  Q
    ||||||||||||||||||||||||||||||||||    
T  22275171 aagggttagagagaagagggagagcttgaagaat 22275138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 22284310 - 22284278
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||||||||    
T  22284310 taaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 125
Target Start/End: Complemental strand, 25213403 - 25213372
Alignment:
Q  94 aaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 7507756 - 7507789
Alignment:
Q  92 ctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||| |||||||||||    
T  7507756 ctaaggtaagggggttagtcttcatcataatcat 7507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22284404 - 22284371
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaat 34  Q
    |||||||||||||||||| |||||||||||||||    
T  22284404 aagggttagagagaagagagagagcttgaagaat 22284371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 22275077 - 22275045
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||| |||||||||||||||    
T  22275077 taaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 42177874 - 42177918
Alignment:
Q  81 ttaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||  ||||||||||||||||||||  |||||||||||||    
T  42177874 ttaatcttcttctaaggtaagggggttagttattatcataatcat 42177918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 6355 - 6475
Alignment:
Q  5 gttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggg 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  6355 gttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattattccttatctaaggtaagggg 6454  T
Q  105 gttagtctttatcataatcat 125  Q
    |||||||||||||||||||||    
T  6455 gttagtctttatcataatcat 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 51018 - 51170
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    ||||||||||||||||   |||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51018 aagggttagagagaag---gagaacttgaagaactaaggattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatcttaggta 51114  T
Q  100 agggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51115 aggagattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 51170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12326 - 12450
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12326 aagggttagagagaagagggagagcttgaagaatcaagattggattgagcttaggagctaaattgaagtctaagttgggatgaatctttatctaaggtaa 12425  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||| ||||||||||||||    
T  12426 gggggttagtttttatcataatcat 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 247320 - 247428
Alignment:
Q  47 gagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247320 gagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaa 247419  T
Q  147 atgttgtat 155  Q
    |||||||||    
T  247420 atgttgtat 247428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 34007 - 34107
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || ||||||||||||||||||||||   |||| || |||||||| |||||||||||||||||||||||| ||||||||    
T  34007 agcttgaggaatcaa--ttggcgtaagcttaggagctaaattgaagcaagagtttgggttaatcttcatctaaggtaagggggttagtcttcatcataat 34104  T
Q  123 cat 125  Q
    |||    
T  34105 cat 34107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 193305 - 193429
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaa 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  193305 aagggttagagagaagagggagagcttgaagaattaagattggagtgagcttaggagctaaagtgaagcctaagttgggattaatcttcatttaaggtaa 193404  T
Q  101 gggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||    
T  193405 gggggttagtctttatcataatcat 193429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 12543 - 12389
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  12543 aagggttagagagaagagggagagcttgaagaatcaaaaattggagtgagcttaggagctaaagtgaagcctaagttaggattaatctctatctaaggta 12444  T
Q  100 agggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||||||| | ||||||| || ||||||||| |||||    
T  12443 agggggttagtctttatcataatcatcttaattttgt-aactttcaaatgctgtat 12389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 26271 - 26402
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26271 cttgaagaattaaggattggagtgagcttaggagctaaattgaagcctaagatgggattaatcttcatctaaggtaagggggttagtctttatcataatc 26370  T
Q  124 atcatcattttgtaaattttcaaatgttgtat 155  Q
    || |||||||||||||||||||||||||||||    
T  26371 atgatcattttgtaaattttcaaatgttgtat 26402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 12166 - 12063
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||    
T  12166 agagcgtgaagaatcaa-attggggtaagcttaggagctaaattgaagccaaagtttggattaatcattatctaagataagggggttagtcttcatcata 12068  T
Q  121 atcat 125  Q
    |||||    
T  12067 atcat 12063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 8051 - 8125
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaa-gggggttagtctttatcataatcat 125  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  8051 taggagctaaaatgaagcctaagtttggattaatcattatctaaggtaaggggggttagtcttcatcataatcat 8125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 42156 - 42004
Alignment:
Q  1 aagggttagagagaagagggagagcttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggta 99  Q
    ||||||||||||||||   |||| |||||||||  ||| |||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  42156 aagggttagagagaag---gagaacttgaagaactaaggattggactgagcttaggaggtaaattgaagtctaagttgggattaatatttatctaaggta 42060  T
Q  100 agggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42059 agggggttggtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 42004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 123018 - 123150
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  123018 cttgaagaatcaagaattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttacctaaggtaagggggttagtcttcaccataatc 123117  T
Q  124 atcatca-ttttgtaaattttcaaatgttgtat 155  Q
    ||||| | |||||||||||| ||||||||||||    
T  123118 atcataatttttgtaaatttgcaaatgttgtat 123150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 13214 - 13317
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13214 agagcttgaggaatcaagattgg-gtgagcttaggagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 13312  T
Q  121 atcat 125  Q
    |||||    
T  13313 atcat 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 56005 - 55904
Alignment:
Q  25 cttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  56005 cttgaagaatcaagaattggagagagcttaggagctaaattgaagcctaaattgggattaatctttatctaaggtaagggggttagtctttatcataatc 55906  T
Q  124 at 125  Q
    ||    
T  55905 at 55904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 108021 - 108107
Alignment:
Q  39 attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||| || |||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  108021 attggggtaagcttaggagctgaattgaagcctaagttggaattaatcttcatctaaggtaagggggttagtctttatcataatcat 108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 57321 - 57424
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  57321 agagcttgaggaatcaagattgg-gtgagcttagtagctaaagtgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 57419  T
Q  121 atcat 125  Q
    |||||    
T  57420 atcat 57424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 809 - 910
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  809 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 908  T
Q  124 at 125  Q
    ||    
T  909 at 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 9813 - 9914
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9813 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatcttcatctaaggtaagggggttagtctttatcataatc 9912  T
Q  124 at 125  Q
    ||    
T  9913 at 9914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 17235 - 17336
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatc 123  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  17235 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaatctccatctaaggtaagcgggttagtctttatcataatc 17334  T
Q  124 at 125  Q
    ||    
T  17335 at 17336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 444 - 339
Alignment:
Q  20 gagagcttgaagaatcaaga-ttggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    |||| ||||||||||||||| |||| |||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  444 gagaacttgaagaatcaagaattggggtggtcttaggagctaaattgaagcctaagtttggattaatccttatctaaggtaagggggttagtcttcatca 345  T
Q  119 taatca 124  Q
    ||||||    
T  344 taatca 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 25637 - 25532
Alignment:
Q  19 ggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    ||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||    
T  25637 ggagaacttgaagaatcaagaattaggtgagcttaggagctaaattgaagcctaagtttgggttaatccttatctaaggtaagggggttagtcttcatca 25538  T
Q  119 taatca 124  Q
    ||||||    
T  25537 taatca 25532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 5922 - 6052
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  || |||| |||||||||||| |||||||||   |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5922 agcttgaggaatcaa--ttagagtaagcttaggagctgaattgaagcaagagttaggattaatctctatctaaggtaagggggttagtctttatcataat 6019  T
Q  123 catcatcattttgtaaattttcaaatgttgtat 155  Q
    |||  ||| |||| ||||| |||||||||||||    
T  6020 cattttcactttgcaaattctcaaatgttgtat 6052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 55942 - 56045
Alignment:
Q  21 agagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcata 120  Q
    ||||||||||||||||| ||||| |||| |||||||| |||||| ||||||||||| ||||||||| ||||||| ||| |||||||||||||| ||||||    
T  55942 agagcttgaagaatcaa-attggggtgaacttaggagataaattaaagcctaagtttggattaatcattatctacggtcagggggttagtcttcatcata 56040  T
Q  121 atcat 125  Q
    |||||    
T  56041 atcat 56045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 34266 - 34340
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34266 ttaggagctaaaatgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 34340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 45416 - 45338
Alignment:
Q  47 gagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||||||    
T  45416 gagcttaggagcttaattgaagcctaagtttggattaaccattatctaaggtaagggggttagtcttcatcataatcat 45338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 54802 - 54724
Alignment:
Q  47 gagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||| ||||||||| |||||| ||||||| | ||||||||||||||| |||||||||| |||||||||||    
T  54802 gagcttaggagcttaattgaagcttaagtttggattaaccattatctaaggtaaggtggttagtcttcatcataatcat 54724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 136
Target Start/End: Complemental strand, 18100 - 18015
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcatcatcattttgt 136  Q
    ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| || |||||||    
T  18100 ttaggagttaaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcataattattttgt 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 814 - 944
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| ||||||| |   ||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  814 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaatcaagagttggggttaatcttcttctaaggtaagggggttagtctttatcataat 911  T
Q  123 catcatcattttgtaaattttcaaatgttgtat 155  Q
    |||| ||| |||  ||||| |||||||||||||    
T  912 catcttcactttacaaattctcaaatgttgtat 944  T

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Target: scaffold0175; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 15298 - 15238
Alignment:
Q  25 cttgaagaatcaag-attggagtgagcttaggagctaaattgaagcctaagttgggattaa 84  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  15298 cttgaagaattaaggattggagtgaacttaggagctaaattgaagcctaagttgggattaa 15238  T

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Target: scaffold0141 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 22934 - 22857
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  22934 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 22857  T

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Target: scaffold0141; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 27189 - 27112
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  27189 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 27112  T

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Target: scaffold0124 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 1451 - 1528
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  1451 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 1528  T

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Target: scaffold0078 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 36935 - 37012
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  36935 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttatcataatcat 37012  T

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Target: scaffold0125 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 42039 - 41965
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  42039 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcat 41965  T

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Target: scaffold0772 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 5923 - 5846
Alignment:
Q  48 agcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||||| ||| ||  ||||||| |||||||||||||||||||||||||| |||||||||    
T  5923 agcttaggagctaaattgaagcctaggtttggtctaatcttcatctaaggtaagggggttagtctttaccataatcat 5846  T

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Target: scaffold0335 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 5434 - 5508
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||| | ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  5434 ttaggagctaaagtgaagcctaagattggattaatcattacctaaggtaagggggttagtcttcatcataatcat 5508  T

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Target: scaffold0173 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 5623 - 5549
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  5623 ttaggagctaaaatgaagcccaagtttggattaatcattacctaaggtaagggggttagtcttcatcataatcat 5549  T

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Target: scaffold0132 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 13890 - 13824
Alignment:
Q  59 taaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  13890 taaagtgaagcctaagtttggattaatcattatctaaggtaagggggttagtcttcatcataatcat 13824  T

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Target: scaffold0029 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 49710 - 49784
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  49710 ttaggagctaaagtgaagcctaagtttggattaatcattacctaaggtaagggggttagtcttcttcataatcat 49784  T

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Target: scaffold0218 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 4996 - 5048
Alignment:
Q  103 gggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtat 155  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4996 gggttagtctttatcataatcattatcattttgtaaattttcaaatgttgtat 5048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 10188 - 10288
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||| |||||||| |||||||||||||||| |||||| | |||||||||||||||||| |||||  |||||||    
T  10188 agcttgaggaatcaa--ttggggtaagcttatgagctaaagtgaagcctaagttggggttaatcatcatctaaggtaagggggtttgtcttcttcataat 10285  T
Q  123 cat 125  Q
    |||    
T  10286 cat 10288  T

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Target: scaffold0303 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 4304 - 4378
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||  ||||| ||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  4304 ttaggagctaaagtgaagcaaaagtttggattaatcattacctaaggtaagggggttagactttatcataatcat 4378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 95372 - 95298
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||| ||| ||||||||| ||| ||||||||||||||||||||||  ||||||||||    
T  95372 ttaggagctaaagtgaagcctaggtttggattaatcattacctaaggtaagggggttagtcttcttcataatcat 95298  T

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Target: scaffold0195 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 19543 - 19483
Alignment:
Q  96 ggtaagggggttagtctttatcataatcatcatca-ttttgtaaattttcaaatgttgtat 155  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  19543 ggtaagggggttagtcttcatcataatcatcataatttttgtaaattttcaaatgttgtat 19483  T

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Target: scaffold0116 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 442 - 338
Alignment:
Q  19 ggagagcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatca 118  Q
    ||||||||||| |||||||  |||| || |||||||||||| |||||||||   |||| |||||||||||  ||||||||||||||||||||  ||||||    
T  442 ggagagcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcgagagtttggattaatcttcttctaaggtaagggggttagttattatca 345  T
Q  119 taatcat 125  Q
     ||||||    
T  344 aaatcat 338  T

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Target: scaffold0215 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 9223 - 9297
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||||||  |||||| ||||||    
T  9223 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcat 9297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 16121 - 16195
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||||||||||  |||||| | | |||||||||||||||||||||  |||||| ||||||    
T  16121 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaagggggttagttattatcacaatcat 16195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 12002 - 12075
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||||||||||   ||||| | | |||||||||||||||||||||  ||||||||||||    
T  12002 ttaggagctaaagtgaagcctaagttaaaattaaacatcatctaaggtaagggggttagttattatcataatca 12075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 1424 - 1524
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||    ||| || ||||||||  ||||||||||||||||||||  ||||||||||    
T  1424 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagggtttgggttaatcttcttctaaggtaagggggttagttattatcataat 1521  T
Q  123 cat 125  Q
    |||    
T  1522 cat 1524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 6068 - 6142
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | |||||||||||||||||||||| | |||||||||    
T  6068 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttaaacataatcat 6142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 9370 - 9444
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| ||||| | ||| ||| | | ||||||||||||||||||||||  ||||||||||    
T  9370 ttaggagctaaagtgaagcccaagtttgaattgatcataacctaaggtaagggggttagtcttcttcataatcat 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 3578 - 3505
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||||||||| | ||||||| | ||||||||||| ||||||| ||||  ||||||||||    
T  3578 ttaggagctaaagtgaagcctaagtttgaattaatcatcatctaaggtaa-ggggttattcttcctcataatcat 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 6979 - 6905
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  ||||||||||||    
T  6979 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatca 6905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 2773 - 2700
Alignment:
Q  52 taggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||||||||||    
T  2773 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 2700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 54255 - 54182
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||| | |||||||||||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  54255 ttaggagctatagtgaagcctaagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 54182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 3368 - 3271
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    |||||||||||||||  |||| || |||||||||||| |||||||||   ||||  | ||||||||  |||||||||||||||||| |  ||||||||||    
T  3368 agcttgaagaatcaa--ttggggtaagcttaggagctgaattgaagcaagagtttcggttaatcttcttctaaggtaagggggttaattattatcataat 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 80219 - 80187
Alignment:
Q  93 taaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||||||||||||||||||||||||    
T  80219 taaggtaagggggttagtctttatcataatcat 80187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 1363 - 1463
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || || ||||||||| |||||||||   ||||  | ||||||||  ||||||||||||||||||||  ||||||||||    
T  1363 agcttgaggaatcaa--ttggggtaagattaggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataat 1460  T
Q  123 cat 125  Q
    |||    
T  1461 cat 1463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 4129 - 4029
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    ||||||| |||||||  |||| || |||||||||||| |||||||||   |||| || |||||| |  |||||||||||||| |||||  ||||||||||    
T  4129 agcttgaggaatcaa--ttggggtaagcttaggagctgaattgaagcaagagttagggttaatcatcttctaaggtaaggggtttagttattatcataat 4032  T
Q  123 cat 125  Q
    |||    
T  4031 cat 4029  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 64395 - 64470
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||  |||||| ||||||    
T  64395 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcat 64470  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 5061 - 5161
Alignment:
Q  23 agcttgaagaatcaagattggagtgagcttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataat 122  Q
    |||||||||||||||  |||| || |||||||||||| |||||||||   |||| || |||||| |  || |||||||||| ||||||  ||||||||||    
T  5061 agcttgaagaatcaa--ttggggtaagcttaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggagttagttattatcataat 5158  T
Q  123 cat 125  Q
    |||    
T  5159 cat 5161  T

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Target: scaffold0387 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 7053 - 7127
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| |||||| ||| || | ||||||| | | ||||||||||||||||||| ||  ||||||||||    
T  7053 ttaggagctaaagtgaagcttaaatttgaattaatcataacctaaggtaagggggttagtgttcttcataatcat 7127  T

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Target: scaffold0367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 125
Target Start/End: Original strand, 17207 - 17241
Alignment:
Q  91 tctaaggtaagggggttagtctttatcataatcat 125  Q
    ||||||||||||||||||||||| |||||||||||    
T  17207 tctaaggtaagggggttagtcttcatcataatcat 17241  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 48578 - 48504
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatcat 125  Q
    |||||||||||| ||||||| || || | ||||||| | | |||| |||||||||||||||||  ||||||||||    
T  48578 ttaggagctaaagtgaagcccaaatttgaattaatcataacctaatgtaagggggttagtcttcttcataatcat 48504  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 7590 - 7517
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagtctttatcataatca 124  Q
    |||||||||||| |||||| | ||||  |||||| | | |||||||||||||||||| || || ||||||||||    
T  7590 ttaggagctaaagtgaagctttagttaagattaaacatcatctaaggtaagggggtttgttttcatcataatca 7517  T

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Target: scaffold0892 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 3799 - 3743
Alignment:
Q  51 ttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggtt 107  Q
    |||||||||||| |||||||||||||  |||||| | | ||||||||||| ||||||    
T  3799 ttaggagctaaagtgaagcctaagttaagattaaacatcatctaaggtaatggggtt 3743  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 154305 - 154365
Alignment:
Q  50 cttaggagctaaattgaagcctaagttgggattaatctttatctaaggtaagggggttagt 110  Q
    |||||||||| |||||||||   |||| || ||||||||  ||||||||||||||||||||    
T  154305 cttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagt 154365  T

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