View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1395_low_15 (Length: 315)

Name: NF1395_low_15
Description: NF1395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1395_low_15
NF1395_low_15
[»] scaffold0021 (3 HSPs)
scaffold0021 (87-253)||(21871-22037)
scaffold0021 (87-253)||(31447-31613)
scaffold0021 (145-253)||(7330-7438)
[»] chr7 (9 HSPs)
chr7 (87-253)||(17925724-17925890)
chr7 (87-253)||(7825974-7826140)
chr7 (87-253)||(27105804-27105970)
chr7 (87-253)||(27172355-27172521)
chr7 (87-243)||(13378969-13379123)
chr7 (87-253)||(4442002-4442168)
chr7 (95-253)||(13458109-13458267)
chr7 (100-242)||(15716946-15717088)
chr7 (135-233)||(17143354-17143452)
[»] chr6 (9 HSPs)
chr6 (87-253)||(1646980-1647146)
chr6 (87-253)||(23998197-23998363)
chr6 (87-253)||(16380539-16380705)
chr6 (87-253)||(16648135-16648301)
chr6 (87-253)||(14130418-14130584)
chr6 (87-253)||(16099958-16100130)
chr6 (87-182)||(23025912-23026007)
chr6 (208-253)||(23026012-23026057)
chr6 (98-233)||(14643664-14643796)
[»] chr2 (7 HSPs)
chr2 (87-253)||(25130325-25130491)
chr2 (87-253)||(24829749-24829915)
chr2 (87-253)||(24568229-24568395)
chr2 (87-253)||(22760130-22760296)
chr2 (114-253)||(22279821-22279960)
chr2 (121-233)||(10037927-10038039)
chr2 (121-233)||(10098312-10098424)
[»] chr1 (7 HSPs)
chr1 (87-245)||(41215949-41216107)
chr1 (87-253)||(20927154-20927320)
chr1 (87-253)||(20829485-20829651)
chr1 (95-253)||(20527153-20527311)
chr1 (93-201)||(22133855-22133963)
chr1 (108-238)||(21200993-21201123)
chr1 (87-156)||(35930918-35930987)
[»] scaffold0561 (1 HSPs)
scaffold0561 (87-253)||(7029-7195)
[»] scaffold0170 (1 HSPs)
scaffold0170 (87-253)||(34201-34367)
[»] chr8 (8 HSPs)
chr8 (87-253)||(22436454-22436620)
chr8 (90-245)||(23902323-23902478)
chr8 (87-253)||(16875559-16875725)
chr8 (87-253)||(23155506-23155670)
chr8 (87-253)||(21848801-21848967)
chr8 (87-245)||(20650819-20650977)
chr8 (87-253)||(21195004-21195169)
chr8 (87-193)||(16414302-16414408)
[»] chr3 (8 HSPs)
chr3 (87-253)||(15611817-15611983)
chr3 (87-253)||(13965612-13965778)
chr3 (87-253)||(15948730-15948896)
chr3 (87-253)||(8272659-8272825)
chr3 (87-253)||(30139520-30139686)
chr3 (87-253)||(30149071-30149237)
chr3 (87-253)||(6151113-6151279)
chr3 (87-253)||(25768032-25768198)
[»] scaffold1488 (1 HSPs)
scaffold1488 (87-253)||(827-993)
[»] scaffold0610 (1 HSPs)
scaffold0610 (87-245)||(6953-7111)
[»] scaffold0302 (2 HSPs)
scaffold0302 (87-253)||(7269-7435)
scaffold0302 (95-253)||(327-485)
[»] scaffold0225 (1 HSPs)
scaffold0225 (87-253)||(25510-25676)
[»] scaffold0162 (2 HSPs)
scaffold0162 (87-253)||(15024-15190)
scaffold0162 (87-253)||(11198-11364)
[»] scaffold0076 (1 HSPs)
scaffold0076 (87-253)||(42374-42540)
[»] chr5 (4 HSPs)
chr5 (87-253)||(23507683-23507849)
chr5 (87-253)||(24583209-24583375)
chr5 (87-253)||(21935391-21935557)
chr5 (99-233)||(20250499-20250633)
[»] scaffold0218 (2 HSPs)
scaffold0218 (98-253)||(26443-26598)
scaffold0218 (87-253)||(1976-2142)
[»] scaffold0876 (1 HSPs)
scaffold0876 (87-245)||(970-1128)
[»] scaffold0387 (1 HSPs)
scaffold0387 (87-253)||(16174-16340)
[»] scaffold0266 (1 HSPs)
scaffold0266 (87-245)||(7885-8043)
[»] scaffold0120 (1 HSPs)
scaffold0120 (87-253)||(24292-24458)
[»] scaffold0077 (1 HSPs)
scaffold0077 (87-253)||(26290-26456)
[»] scaffold0692 (1 HSPs)
scaffold0692 (87-253)||(1908-2074)
[»] chr4 (2 HSPs)
chr4 (87-253)||(15291179-15291345)
chr4 (113-252)||(12340912-12341051)
[»] scaffold0022 (1 HSPs)
scaffold0022 (87-250)||(8850-9013)
[»] scaffold0467 (1 HSPs)
scaffold0467 (87-253)||(1645-1811)
[»] scaffold0008 (2 HSPs)
scaffold0008 (87-253)||(132513-132679)
scaffold0008 (95-198)||(25938-26041)
[»] scaffold0092 (1 HSPs)
scaffold0092 (98-253)||(223-378)
[»] scaffold0124 (1 HSPs)
scaffold0124 (87-253)||(5830-5998)
[»] scaffold0369 (1 HSPs)
scaffold0369 (87-225)||(6888-7026)
[»] scaffold0462 (1 HSPs)
scaffold0462 (87-191)||(2117-2221)
[»] scaffold0719 (1 HSPs)
scaffold0719 (106-159)||(4797-4850)
[»] scaffold0635 (1 HSPs)
scaffold0635 (121-233)||(9031-9143)
[»] scaffold0465 (1 HSPs)
scaffold0465 (87-145)||(13649-13707)
[»] scaffold0029 (1 HSPs)
scaffold0029 (185-229)||(114699-114743)


Alignment Details
Target: scaffold0021 (Bit Score: 127; Significance: 1e-65; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 21871 - 22037
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  21871 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 21970  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||    
T  21971 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtg 22037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 31447 - 31613
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  31447 atcatcatattagagtgaaggcggaagatatattcaaaaccgcgttccgaacgaggtatggacactatgagtattatgtgatgccatttaaagtatccaa 31546  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||    
T  31547 tgcaccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggactgttttgtggtg 31613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 145 - 253
Target Start/End: Complemental strand, 7438 - 7330
Alignment:
Q  145 tggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgt 244  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||||||||| |||| |||||    
T  7438 tggacactatgagtattatgtgatgccatttggagtatctaatgcgccaggtgtcttcatggagtatatgaatataatatttcatccttatctgaaccgt 7339  T
Q  245 tctgtggtg 253  Q
    | |||||||    
T  7338 tttgtggtg 7330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 17925890 - 17925724
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  17925890 atcatcagattagagtgaagacggaagatatatccaaaaccgcgtttcgaatgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 17925791  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  17925790 tgcgccaggtgtcttcatggaatatatgaatagaatatttcatccttttctagaccgttttgtggtg 17925724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 7826140 - 7825974
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  7826140 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7826041  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  7826040 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 7825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 27105804 - 27105970
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  27105804 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27105903  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  27105904 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 27105970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 27172521 - 27172355
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  27172521 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 27172422  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  27172421 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 27172355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 13379123 - 13378969
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  13379123 atcatcagatcagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagtatccaa 13379026  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccg 243  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  13379025 tgcgccaggtgtcttcatgaaatatatgaatagaatatttcatccttatctggaccg 13378969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 4442168 - 4442002
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||||  ||||||||| |||||| ||||| | |||||||||||| |||||||||||    
T  4442168 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccggtcgaggtatgaacactaagagtattctgtgatgccattcggagtatccaa 4442069  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||    
T  4442068 tgcgccaggtgtcttcatggaatatatgaatataatattccatccttttctggaccgttttgtggtg 4442002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 253
Target Start/End: Complemental strand, 13458267 - 13458109
Alignment:
Q  95 attagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccag 194  Q
    ||||||||||||| | ||||||||||| |||||| ||||||||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  13458267 attagagtgaaggcgaaagatatatccgaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgtcatttggagtatccaatgcgccag 13458168  T
Q  195 gtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||| |||||||||||||| ||| |||||||||| ||| |||| |||||||    
T  13458167 gtgtcttcatggaatatatgaatagaacattccatccttttcaggatcgttttgtggtg 13458109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 100 - 242
Target Start/End: Original strand, 15716946 - 15717088
Alignment:
Q  100 agtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtc 199  Q
    |||||||| ||| |||||||||||||| ||||||||||| || ||||| |||||||| || | ||| |||||||||||  || | |||| |||  |||||    
T  15716946 agtgaaggcggaggatatatccaaaactgcgttccgaactagatatggtcactatgaatattctgtaatgccatttggtctaactaatgtgcctagtgtc 15717045  T
Q  200 ttcatgggatatatgaatagaatatttcatccttttctggacc 242  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  15717046 ttcatggaatatatgaatagaatattccatccttttctggacc 15717088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 17143354 - 17143452
Alignment:
Q  135 gaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatatgaatagaatatttcatcctt 233  Q
    |||||||||||||||||||||| || | || |||| ||||||| ||  | ||| |||| ||||||||||||| ||||||||||||||| || |||||||    
T  17143354 gaacgaggtatggacactatgaatattctgcgatgtcatttggtgtgactaatacgcccggtgtcttcatggaatatatgaatagaatcttccatcctt 17143452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1646980 - 1647146
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  1646980 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 1647079  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  1647080 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtg 1647146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 23998363 - 23998197
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  23998363 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23998264  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  23998263 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 23998197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 16380539 - 16380705
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  16380539 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16380638  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  16380639 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 16380705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 16648135 - 16648301
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  16648135 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16648234  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  16648235 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 16648301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 14130584 - 14130418
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||||| |||||||| |||||||    
T  14130584 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggatactatgagtattatgtgatgtcatttggattatccaa 14130485  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    || || |||||||||||||| |||||||||||||| ||||||||||| | ||||||||| |||||||    
T  14130484 tgtgctaggtgtcttcatggaatatatgaatagaacatttcatccttatttggaccgttttgtggtg 14130418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 16100130 - 16099958
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||| |||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||| |||||||||||||| || ||    
T  16100130 atcatcagattatagtgaaggcggaagatatatccaaaacatcgttacgaacgaggtatggacactatgagtattatgtaatgccatttggagtgtctaa 16100031  T
Q  187 tgcgccaggtg------tcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    || ||||||||      |||| ||||  ||||||||||||||||||||||| | | ||||||||| |||||||    
T  16100030 tgtgccaggtgtctttatctttatggagtatatgaatagaatatttcatccatatttggaccgttttgtggtg 16099958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 23025912 - 23026007
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtat 182  Q
    ||||||| ||||||||||||| ||||||||||||||||||  |||  |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  23025912 atcatcagattagagtgaaggcggaagatatatccaaaactacgtctcgaacgaggtatggacactatgagtattctgtgatgccatttggagtat 23026007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 23026012 - 23026057
Alignment:
Q  208 atatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||||||||||||||||||| || |||||| |||||||    
T  23026012 atatatgaatagaatatttcatccttttatgaaccgttttgtggtg 23026057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 233
Target Start/End: Original strand, 14643664 - 14643796
Alignment:
Q  98 agagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtg 197  Q
    |||||||||  ||| ||||| ||||| || || |||||||| || ||||||||||  || || | ||||||||||||||| ||  |  ||||||  ||||    
T  14643664 agagtgaagacggaggatatttccaagactgcattccgaactagatatggacact--ga-tattctgtgatgccatttggtgttactgatgcgcatggtg 14643760  T
Q  198 tcttcatgggatatatgaatagaatatttcatcctt 233  Q
    ||||||||| ||||||||||||||| || |||||||    
T  14643761 tcttcatggaatatatgaatagaatcttccatcctt 14643796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 25130491 - 25130325
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  25130491 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctatgatgccatttggagtatccaa 25130392  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| | |||||||    
T  25130391 tgcgccaggtgtcttcctggaatatatgaatagaatatttcatcctttcctggaccgctttgtggtg 25130325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 24829749 - 24829915
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  24829749 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24829848  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  24829849 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 24829915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 24568229 - 24568395
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||| | ||||||||||||||||||||| ||    
T  24568229 atcatcatattagagtgaaggcggaagatatatccaaaaccacgttccaaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24568328  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||  |||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  24568329 tgcatcaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtg 24568395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 22760130 - 22760296
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||||||||||| | |||||||||||||||||||||| |    
T  22760130 atcatcatattagagtgaaggcggaagatatatccaaaaccgtgttcaaaacaaggtatggacactatgagtattctgtgatgccatttggagtatccga 22760229  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||  |||||||||| |||||||    
T  22760230 tgcgctaggtgtcttcatggagtatatgaatagaatatttcatccttacctggaccgttttgtggtg 22760296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 114 - 253
Target Start/End: Complemental strand, 22279960 - 22279821
Alignment:
Q  114 atatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatat 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| |||| ||| ||    
T  22279960 atatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccatgtgtctttatggaatacat 22279861  T
Q  214 gaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||| |||||| ||||||||||| |||||||    
T  22279860 gaatagaatattttatccttatctggaccgttttgtggtg 22279821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 10037927 - 10038039
Alignment:
Q  121 caaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatatgaataga 220  Q
    |||||| || || |||||||||||||| |||||||| |||| ||||||| ||||||| ||  | |||||||  ||||||||||||| ||| |||||||||    
T  10037927 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10038026  T
Q  221 atatttcatcctt 233  Q
    || || |||||||    
T  10038027 atcttccatcctt 10038039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 10098312 - 10098424
Alignment:
Q  121 caaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatatgaataga 220  Q
    |||||| || || |||||||||||||| |||||||| |||| ||||||| ||||||| ||  | |||||||  ||||||||||||| ||| |||||||||    
T  10098312 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 10098411  T
Q  221 atatttcatcctt 233  Q
    || || |||||||    
T  10098412 atcttccatcctt 10098424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 41215949 - 41216107
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  41215949 atcatcagattagagtgaaggtgtaagatatatccaaaaccgcgttccgaacgaggtatggaaactatgagtattctgtgatgccatttggagtatccaa 41216048  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  41216049 tgcgccaggtgttttcatgcaatatatgaatagaatatttcatccttttctggaccgtt 41216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 20927320 - 20927154
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  20927320 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20927221  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||| ||| |||||||    
T  20927220 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggacagttttgtggtg 20927154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 20829485 - 20829651
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  20829485 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20829584  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  20829585 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 20829651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 95 - 253
Target Start/End: Complemental strand, 20527311 - 20527153
Alignment:
Q  95 attagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccag 194  Q
    |||||||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| ||||    
T  20527311 attagagtgaaggcagaagataaatccaaaaccgcattccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcaccag 20527212  T
Q  195 gtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||| || | ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  20527211 gtgtctttatagaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 20527153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 93 - 201
Target Start/End: Original strand, 22133855 - 22133963
Alignment:
Q  93 atattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgcc 192  Q
    |||||||||| |||| ||||||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  22133855 atattagagtaaaggcggaagatatatccaagaccgcgttatgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaatgcgcc 22133954  T
Q  193 aggtgtctt 201  Q
    |||||||||    
T  22133955 aggtgtctt 22133963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 21200993 - 21201123
Alignment:
Q  108 tggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatggg 207  Q
    |||| |||||||||||||| |||||||||||||| ||||| |||||||| || | ||||||||||||| | ||  | ||| ||||  ||||||||||||     
T  21200993 tggaggatatatccaaaactgcgttccgaacgagatatggtcactatgaatattctgtgatgccatttagtgtgactaatacgccgagtgtcttcatgga 21201092  T
Q  208 atatatgaatagaatatttcatccttttctg 238  Q
    |||||||||||||||||||||||||| ||||    
T  21201093 atatatgaatagaatatttcatccttatctg 21201123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 35930918 - 35930987
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatga 156  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35930918 atcatcagattagagtgaaggcggaagatatatccaaaaccacgttccgaacgaggtatggacactatga 35930987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 7029 - 7195
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  7029 atcatcatattagagtgaaggcggaagatatatccaaaacagcgttccaaacgaggtatggacactatgggtattctgtgatgccatttggagtatccaa 7128  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||    
T  7129 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatatggaccgttttgtggtg 7195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 34367 - 34201
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34367 atcatcagattagagtaaaggcggaagatatacccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 34268  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  34267 tgcgccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggaccgttttgtggtg 34201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 22436620 - 22436454
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||||||||||||||||||||    
T  22436620 atcatcatattagagtgaaagcggaagatatatccaaaaccgcgttccgaacaaggtatggacagtatgagtattctgtgatgccatttggagtatccaa 22436521  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  22436520 tgcgccaggtgtcttaatggaataaatgaatagaatatttcatccttatctggaccgttttgtggtg 22436454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 23902478 - 23902323
Alignment:
Q  90 atcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgc 189  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  23902478 atcatattttagtaaaggtggaagatatatccaaaaccgcgttccaaacgaggcatggacactatgagtattctgtgatgccatttggagtatccaatgc 23902379  T
Q  190 gccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
     | |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23902378 actaggtgtcttcatggaatatatgaatagaatatttcatccttttctggaccgtt 23902323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 16875559 - 16875725
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  16875559 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 16875658  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  16875659 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 16875725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 23155506 - 23155670
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||| | ||||    
T  23155506 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacact--gagtattctgtgatgccatttggagcacccaa 23155603  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||||||    
T  23155604 tgcgctaggtgtcttcatggaatatatgaatagaatatttcatccttatttggaccgttttgtggtg 23155670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 21848801 - 21848967
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| | |||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||    
T  21848801 atcatcagattagagtaaaggcgaaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21848900  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  21848901 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 21848967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 20650819 - 20650977
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  20650819 atcatcaaattagagtaaaggcagaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 20650918  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
    |||||||||||||||||| |  |||||||||||||||||| |||||| |||||||||||    
T  20650919 tgcgccaggtgtcttcatagagtatatgaatagaatattttatccttatctggaccgtt 20650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 21195004 - 21195169
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||| | |||||||| |||||||||||  ||    
T  21195004 atcatcataatagagtgaaggcggaagatatatccaaaaccgtgttccgaacaaggtatggacactatgagtattttgtgatgcaatttggagtatataa 21195103  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    || |||||||  |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  21195104 tgtgccaggt-acttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtg 21195169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 16414408 - 16414302
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||||| |||||  ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||||||||||| |||||||    
T  16414408 atcatcatactagaggaaaggtagaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctgtgatgccatttggaatatccaa 16414309  T
Q  187 tgcgcca 193  Q
    |||||||    
T  16414308 tgcgcca 16414302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 15611983 - 15611817
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  15611983 atcatcagattagagtgaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15611884  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  15611883 tgcaccaggtgtctttatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtg 15611817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 13965612 - 13965778
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| || ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  13965612 atcatcagattagagtaaaggcggtagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 13965711  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  13965712 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 13965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 15948730 - 15948896
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  15948730 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattccgtgatgccatttggagtatccaa 15948829  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||| | |||||||    
T  15948830 tgcgccaggtgtctttatggaatatatgaatagaatatttcatccttatttggaccgatttgtggtg 15948896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 8272659 - 8272825
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  8272659 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8272758  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  8272759 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 8272825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 30139686 - 30139520
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  30139686 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30139587  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  30139586 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 30139520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 30149237 - 30149071
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  30149237 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 30149138  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  30149137 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 30149071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 6151113 - 6151279
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  6151113 atcatcagattagagtgaaggcagaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 6151212  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| ||||  |||||||||| |||||||||||||| ||| ||||||| |||||||    
T  6151213 tgcgccaggtgtctttatggagtatatgaataaaatatttcatccttatctagaccgttttgtggtg 6151279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 25768198 - 25768032
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||| |  || |||||||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||| |||||||| ||    
T  25768198 atcatcagattagagtgaaagcagatgatatatccaaaaccgcgttccaaacaaggtatggacactatgagtattctgtgatgccattcggagtatctaa 25768099  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  25768098 ttcgccaggtgtcttcatggaatatatgaatagaatatttcatccttatctggaccgttttgtggtg 25768032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1488 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 827 - 993
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  827 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatgaacactatgagtattctgtgatgccatttggagtatccaa 926  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| | |||||| || |||||||    
T  927 tgcgccagttgtcttcatggaatatatgaatagaatatttcatccttatttggaccattttgtggtg 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 6953 - 7111
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6953 atcatcagattagagtgaaggcggaagatatatccaaaacagcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatccaa 7052  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
    ||| |||||||||||||| |  |||||||||| |||||||||||||| |||||||||||    
T  7053 tgcaccaggtgtcttcattgagtatatgaataaaatatttcatccttatctggaccgtt 7111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 7435 - 7269
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||    
T  7435 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaa 7336  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||| || |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  7335 tgcgccaggtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 7269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 95 - 253
Target Start/End: Complemental strand, 485 - 327
Alignment:
Q  95 attagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccag 194  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  485 attagagtaaaggcggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgtcatttggagtatctaatgcgccag 386  T
Q  195 gtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||| || |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  385 gtgtttttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 25676 - 25510
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  25676 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 25577  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  25576 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 25510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 15190 - 15024
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  15190 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15091  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  15090 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 15024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 11198 - 11364
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| | | |||||||||||||||| || ||    
T  11198 atcatcagattagagtgaaggcggaagatatatccaaaaccgcattccgaacaaggtatggacactatgagtattctttgatgccatttggagtgtctaa 11297  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  11298 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 11364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 42540 - 42374
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  42540 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 42441  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||| ||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  42440 tgcgctaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 42374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 23507849 - 23507683
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  23507849 atcatcagattagagtaaaggcggaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 23507750  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  23507749 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 23507683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 24583375 - 24583209
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||   |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  24583375 atcatcagattagagtaaaggcaaaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 24583276  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  24583275 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 24583209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 21935391 - 21935557
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||    
T  21935391 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaa 21935490  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  21935491 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 21935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 233
Target Start/End: Original strand, 20250499 - 20250633
Alignment:
Q  99 gagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgt 198  Q
    |||||||  |||||||||| || || || ||||| ||||| ||||||||||| |||||||| | | | ||||||||||| ||| | || | | |||||      
T  20250499 gagtgaaaatggaagatatttctaagactgcgtttcgaacaaggtatggacattatgagtattttattatgccatttggtgtaactaacgtgtcaggtaa 20250598  T
Q  199 cttcatgggatatatgaatagaatatttcatcctt 233  Q
    ||| |||| |||||||||||| || || |||||||    
T  20250599 ctttatggaatatatgaataggattttccatcctt 20250633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 98 - 253
Target Start/End: Complemental strand, 26598 - 26443
Alignment:
Q  98 agagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtg 197  Q
    |||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||| | ||||||| ||||| ||||||| |||||||||||||    
T  26598 agagtgaaggcggaagatatatccaataccgctttccgaacaaggtatggacactatgagtattctgtgatgtcatttagagtatctaatgcgccaggtg 26499  T
Q  198 tcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  26498 tcttcatggaatatatgaatagaatatttcatccttttctggaccgttttgtggtg 26443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1976 - 2142
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| | ||||||||||||||||||||| ||    
T  1976 atcatcaaattagagtgaaggcggaagatatatccaaaaccgcattccgaacgaggtatagacactatgagtattctgtgatgccatttggagtatctaa 2075  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| |||||||| || |||||||    
T  2076 tgcaccaggtgtctttatggaataaatgaatagaatatttcatccttatctggaccattttgtggtg 2142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 970 - 1128
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||| | ||||||  |||||||||||||||||||||||||||||| | |||||||||||||| |||||||||    
T  970 atcatcagattagagtgaaggcggaagatatacctaaaaccatgttccgaacgaggtatggacactatgagtattctgtgatgccatttgcagtatccaa 1069  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1070 tgcgccaggtatcttcatggaatatatgaatagaatatttcatccttatctggaccgtt 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 16340 - 16174
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  16340 atcatcaaattagaatgaatgcggaagatatatctaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccattttgagtatccaa 16241  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||| ||||||||||| |||||||    
T  16240 tgcgtcaggtgtcttcatggaatacatgaatagaatatttcaaccttatctggaccgttttgtggtg 16174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 7885 - 8043
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  7885 atcatcagattagagtaaaggcgaaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 7984  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgtt 245  Q
    ||| ||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||    
T  7985 tgcaccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgtt 8043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 24458 - 24292
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||||||||||||||||||| ||    
T  24458 atcatcagattagagtgaaggcggaagatatatccaaaaccgcgttccgaacaaggtatggacactatgagtatgctgtgatgccatttggagtatcgaa 24359  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||| |||||||||  |||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  24358 tgcgctaggtgtctttgtggagtatatgaatagaatatttcatccttatctggaccgttttgtggtg 24292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 26290 - 26456
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  26290 atcatcagattagagtgaaggcggaagagatatccaaaaccgcgttccgaacgaggtatggacactatgagtattttgtgatgccatttggagtatctaa 26389  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||||||||||||  ||| ||  ||||||||| |||||||||||| ||||||||||| |||||||    
T  26390 tgcgccaggtgtctttctggaatgcatgaatagagtatttcatccttatctggaccgttttgtggtg 26456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1908 - 2074
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||| |  |||||||||||||||||||| ||    
T  1908 atcatcagattagagtaaaggcggaagatatatccaaaaccgcgttctgatcgaggtatggacactatgagtattcggtgatgccatttggagtatctaa 2007  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||| ||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||| |||||||    
T  2008 tgcaccaggtgtcttcatggagtatatgaatagaatatttcatccttatctggactgttttgtggtg 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 15291179 - 15291345
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  15291179 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 15291278  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| ||||||| |||||||||||||| |||||||| || |||||||    
T  15291279 tgcgccaggtgtctttatggaatacatgaataaaatatttcatccttatctggaccattttgtggtg 15291345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 113 - 252
Target Start/End: Original strand, 12340912 - 12341051
Alignment:
Q  113 gatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatata 212  Q
    ||||||||||||||||||||||||||  || |||||||||||||||| | ||||||||||||||||||  | |||||||||||||||||||||| |||||    
T  12340912 gatatatccaaaaccgcgttccgaacagggaatggacactatgagtattctgtgatgccatttggagtgactaatgcgccaggtgtcttcatggaatata 12341011  T
Q  213 tgaatagaatatttcatccttttctggaccgttctgtggt 252  Q
    ||||||| ||||| ||||||||||||||| ||| ||||||    
T  12341012 tgaataggatattccatccttttctggactgttttgtggt 12341051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 8850 - 9013
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| || || || |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  8850 atcatcagataagggtaaaggcggaagatatatccaaaaccgcgtttcgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 8949  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtg 250  Q
    ||| ||||||||||| |||||||| |||||||||||||||||||||| |||||| |||| ||||    
T  8950 tgcaccaggtgtctttatgggatacatgaatagaatatttcatccttatctggatcgttttgtg 9013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 1645 - 1811
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||||||||  |||||| |||||||||||||||||||||| ||||||||| |||||||||| |  || |||||||||||||| |||||    
T  1645 atcatcagattagagtgaaggcagaagatgtatccaaaaccgcgttccgaacaaggtatggaaactatgagtattccgtaatgccatttggagtttccaa 1744  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| |||||||    
T  1745 tgcgccaggtgtctttatggaatacatgaatagaatatttcatccttatctggaccgttttgtggtg 1811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 103; Significance: 3e-51; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 132513 - 132679
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  |||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||    
T  132513 atcatcagattagagtaaaggctgaagatatatcccaaaccgcgttccgaacgagatatggacactatgagtactctgtgatgccatttggagtatctaa 132612  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    |||||| |||||||| |||| ||| ||||||||||||||| |||||| ||||||| ||| |||||||    
T  132613 tgcgcccggtgtctttatggaatacatgaatagaatattttatccttatctggactgttttgtggtg 132679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 95 - 198
Target Start/End: Complemental strand, 26041 - 25938
Alignment:
Q  95 attagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccag 194  Q
    ||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||| | ||||||||||||| |||||| |||||||||||    
T  26041 attagagtgaaggcggaagatatatccataaccgcgttccaaacgaagtatggacactatgagtattctgtgatgccatttagagtatgcaatgcgccag 25942  T
Q  195 gtgt 198  Q
    ||||    
T  25941 gtgt 25938  T

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Target: scaffold0092 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 98 - 253
Target Start/End: Complemental strand, 378 - 223
Alignment:
Q  98 agagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtg 197  Q
    |||||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  378 agagtgaaggcggaatatatatccaaaatcgcgttccgaacaaggtatggacactatgagtattctgtgatgccatttggagtatctaatgcgccaggtg 279  T
Q  198 tcttcatgggatatatgaatagaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||| |  ||||||||||||||||||||||||| |||| || ||| |||||||    
T  278 tcttcatagagtatatgaatagaatatttcatccttatctgtactgttttgtggtg 223  T

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Target: scaffold0124 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 253
Target Start/End: Original strand, 5830 - 5998
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| ||||  ||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  5830 atcatcagattagagtaaaggcagaagatatatccaaaactgcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 5929  T
Q  187 tgcgccaggtgtcttca-tgggatatatgaat-agaatatttcatccttttctggaccgttctgtggtg 253  Q
    ||||||||||||||| | ||  ||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  5930 tgcgccaggtgtctttattgaaatacatgaataagaatatttcatccttatctggaccgttttgtggtg 5998  T

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Target: scaffold0369 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 225
Target Start/End: Complemental strand, 7026 - 6888
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| |||||||| |||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  7026 atcatcagattagagtaaaggcggaagatatattcaaaacttcgttccgaacgaggtatggacactatgagtattctgtgatgccatttggagtatctaa 6927  T
Q  187 tgcgccaggtgtcttcatgggatatatgaatagaatatt 225  Q
    ||| ||||||||||| |||| ||| ||||||||||||||    
T  6926 tgcaccaggtgtctttatggaatacatgaatagaatatt 6888  T

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Target: scaffold0462 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 2221 - 2117
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaa 186  Q
    ||||||| ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  2221 atcatcagattagagtgaaggcggaagatatatccaaaactgtgttccgaacgaggtatggacactatgagtattatgtgatgccatttggagtatctaa 2122  T
Q  187 tgcgc 191  Q
    |||||    
T  2121 tgcgc 2117  T

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Target: scaffold0719 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 4850 - 4797
Alignment:
Q  106 ggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagta 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4850 ggtggaagatatatccaaaaccgcgttccgaacgaggtatggacactatgagta 4797  T

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Target: scaffold0635 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 9143 - 9031
Alignment:
Q  121 caaaaccgcgttccgaacgaggtatggacactatgagtactatgtgatgccatttggagtatccaatgcgccaggtgtcttcatgggatatatgaataga 220  Q
    |||||| || || |||||||||||||| |||||||| |||| ||||||| ||||||| ||  | |||||||  ||||||||||||| ||| |||||||||    
T  9143 caaaactgcatttcgaacgaggtatgggcactatgaatactttgtgatgtcatttggtgtgactaatgcgcttggtgtcttcatggaatacatgaataga 9044  T
Q  221 atatttcatcctt 233  Q
    || || |||||||    
T  9043 atcttccatcctt 9031  T

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Target: scaffold0465 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 13649 - 13707
Alignment:
Q  87 atcatcatattagagtgaaggtggaagatatatccaaaaccgcgttccgaacgaggtat 145  Q
    ||||||| |||| ||||||||   |||||||||||||||||||||||||||||||||||    
T  13649 atcatcagattacagtgaaggcaaaagatatatccaaaaccgcgttccgaacgaggtat 13707  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 114743 - 114699
Alignment:
Q  185 aatgcgccaggtgtcttcatgggatatatgaatagaatatttcat 229  Q
    |||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  114743 aatgcgcctggtgtgttcatggaatatatgaatagaatttttcat 114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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