View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13960_high_13 (Length: 271)

Name: NF13960_high_13
Description: NF13960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13960_high_13
NF13960_high_13
[»] chr5 (5 HSPs)
chr5 (1-65)||(42549620-42549684)
chr5 (121-193)||(32389609-32389682)
chr5 (126-180)||(16745108-16745163)
chr5 (148-200)||(8571843-8571895)
chr5 (133-184)||(39147761-39147813)
[»] chr1 (5 HSPs)
chr1 (149-216)||(11333715-11333782)
chr1 (149-216)||(11491736-11491803)
chr1 (148-200)||(50119022-50119074)
chr1 (126-180)||(23233978-23234033)
chr1 (121-180)||(18534023-18534083)
[»] chr3 (8 HSPs)
chr3 (126-195)||(52309083-52309153)
chr3 (148-200)||(46844939-46844991)
chr3 (110-180)||(42496358-42496428)
chr3 (126-180)||(54021323-54021377)
chr3 (110-217)||(11234453-11234562)
chr3 (136-180)||(32429784-32429829)
chr3 (133-180)||(10828504-10828552)
chr3 (110-217)||(44685119-44685227)
[»] chr6 (4 HSPs)
chr6 (126-217)||(22997363-22997456)
chr6 (126-217)||(23790945-23791038)
chr6 (126-217)||(19892226-19892319)
chr6 (103-217)||(26347408-26347524)
[»] chr4 (9 HSPs)
chr4 (151-216)||(29256940-29257005)
chr4 (134-176)||(38433343-38433386)
chr4 (121-219)||(44568168-44568267)
chr4 (126-215)||(52798305-52798395)
chr4 (126-217)||(46998318-46998411)
chr4 (148-216)||(2629629-2629697)
chr4 (148-176)||(40666838-40666866)
chr4 (145-217)||(43905757-43905829)
chr4 (126-166)||(46582342-46582382)
[»] chr7 (3 HSPs)
chr7 (126-180)||(18223705-18223760)
chr7 (126-180)||(31769500-31769555)
chr7 (126-178)||(3392494-3392547)
[»] chr2 (8 HSPs)
chr2 (126-200)||(40363039-40363114)
chr2 (153-217)||(29449503-29449568)
chr2 (148-200)||(3596300-3596352)
chr2 (126-217)||(4659435-4659527)
chr2 (129-180)||(13773430-13773482)
chr2 (126-200)||(30390336-30390412)
chr2 (126-169)||(30392831-30392875)
chr2 (133-180)||(34149668-34149716)
[»] scaffold0445 (1 HSPs)
scaffold0445 (126-217)||(3964-4057)
[»] scaffold0154 (1 HSPs)
scaffold0154 (153-210)||(28779-28836)
[»] chr8 (7 HSPs)
chr8 (153-206)||(5683809-5683862)
chr8 (121-219)||(5332938-5333038)
chr8 (126-217)||(22274562-22274654)
chr8 (126-217)||(24458344-24458436)
chr8 (148-200)||(25824870-25824922)
chr8 (153-193)||(38283179-38283219)
chr8 (126-200)||(42035363-42035439)


Alignment Details
Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 42549620 - 42549684
Alignment:
Q  1 attctgtttatgatggatgatgatttctaactatttgtcattcaacttgaccttgatgttatttt 65  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42549620 attctgtgtatgatggatgatgatttctaactatttgtcattcaacttgaccttgatgttatttt 42549684  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 32389682 - 32389609
Alignment:
Q  121 tagatatattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgcatgtaattgtg 193  Q
    |||| |||||| ||||||||||||||| ||||||||| ||  |||||||||| |||||||| ||| ||||||||    
T  32389682 tagagatattgcatattatatgtaggagtcggagttcaaattccagacaccccacttctcctcatttaattgtg 32389609  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 16745108 - 16745163
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||| ||||||||||||||  ||||||||||||| |||||||||| ||||||||    
T  16745108 atattgcatattatatgtaggggtcggagttcgaactccagacaccccacttctcc 16745163  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 8571843 - 8571895
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||| |||||||||||  ||||||||||||||| ||| |||||||| ||||||    
T  8571843 tcggggttcgaaccccgaacaccctacttctccacatttaattgtgtgagctc 8571895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 39147761 - 39147813
Alignment:
Q  133 atattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcat 184  Q
    ||||||||||| ||| | ||||||||||||||| |||||| ||||||||||||    
T  39147761 atattatatgttggagctggagttcgaaccccaaacaccccacttctccgcat 39147813  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 11333715 - 11333782
Alignment:
Q  149 cggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactact 216  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||| |||||| ||||| |||||||||    
T  11333715 cggagttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagtcactagactact 11333782  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 11491736 - 11491803
Alignment:
Q  149 cggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactact 216  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||| |||||| ||||| |||||||||    
T  11491736 cggagttcgaaccccggacaccccacttctccacatttaattgtgtgagctctagtcactagactact 11491803  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 50119022 - 50119074
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||||||||||||||| ||||||| |||||||| ||| |||||||| ||||||    
T  50119022 tcggagttcgaaccccggacaccccacttctccacatttaattgtgtgagctc 50119074  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23233978 - 23234033
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||| |||||||||| |||  |||| ||||||||||||||||||||||||||||    
T  23233978 atattgcatattatatgcaggggtcggggttcgaaccccagacaccctacttctcc 23234033  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 18534023 - 18534083
Alignment:
Q  121 tagatatattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    |||| |||||| ||||||||||||||| |||| ||||||||||| ||||| | ||||||||    
T  18534023 tagagatattgcatattatatgtaggagtcggggttcgaaccccggacactccacttctcc 18534083  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 195
Target Start/End: Complemental strand, 52309153 - 52309083
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgag 195  Q
    |||||| ||| |||||| |||| |||| ||||||||||||||||||| |||||||| ||| ||||||||||    
T  52309153 atattgcatactatatgcaggagtcggggttcgaaccccagacaccccacttctccacatttaattgtgag 52309083  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 46844991 - 46844939
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||| ||||||    
T  46844991 tcggagttcgaaccccggacaccctacttctccacatttaaatgtgtgagctc 46844939  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 42496428 - 42496358
Alignment:
Q  110 agcttagttaatagatatattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||||||  |||| |||||| ||||||||||||||  |||| |||||||||||| |||||||||||||||    
T  42496428 agcttagttggtagaaatattgcatattatatgtaggggtcgg-gttcgaaccccaaacaccctacttctcc 42496358  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 54021377 - 54021323
Alignment:
Q  126 atattgtatattatatgtaggatcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||| |||||||||| |||  |||||||||||||||||||||||  |||||||    
T  54021377 atattgcatattatatgcagggccggagttcgaaccccagacaccccgcttctcc 54021323  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 11234453 - 11234562
Alignment:
Q  110 agcttagttaatagatatattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcatgtaa-ttgtgagagctcaagtcat 207  Q
    |||| ||||| |||| ||||||||| ||||||| |||| | || ||||||||||||||||  | |||||||| ||  ||| ||||| |||||| || |||    
T  11234453 agctcagttagtagagatattgtattttatatgcaggagctggggttcgaaccccagacaatccacttctccacaaataaattgtgtgagctctagccat 11234552  T
Q  208 tagactactt 217  Q
    ||||||||||    
T  11234553 tagactactt 11234562  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 32429784 - 32429829
Alignment:
Q  136 ttatatgtag-gatcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||    
T  32429784 ttatatgtagaggtcggagttcgaaccccagacaccccacttctcc 32429829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 10828504 - 10828552
Alignment:
Q  133 atattatatgtag-gatcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||||||| || || ||||||||||||||||||||||| ||||||||    
T  10828504 atattatatgcagagaccggagttcgaaccccagacaccccacttctcc 10828552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 44685227 - 44685119
Alignment:
Q  110 agcttagttaatagatatattgtatattatatgtaggatcggag-ttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcatt 208  Q
    |||||||||  |||| |||||| ||||||||| ||||  | ||| ||||||||||| |||||| |||||||| ||  |||||||| ||| || || || |    
T  44685227 agcttagttggtagagatattgcatattatatataggggctgagattcgaaccccaaacaccccacttctccacaattaattgtgtgagttctagccact 44685128  T
Q  209 agactactt 217  Q
    |||||||||    
T  44685127 agactactt 44685119  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 22997363 - 22997456
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||| ||||||||||||||  |||| ||||||||||| |||||||||||||||| | ||  ||||||| |||||| || || ||||||||||    
T  22997363 atattgaatattatatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaaattgtgtgagctctagccactagactactt 22997456  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 23791038 - 23790945
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||| ||||||||||||||  |||| ||||||||||| |||||||||||||||| | ||  ||||||| |||||| || || ||||||||||    
T  23791038 atattgaatattatatgtaggggtcggggttcgaaccccggacaccctacttctccacaattaaattgtgtgagctctagccactagactactt 23790945  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 19892319 - 19892226
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||| ||||||||||||||  |||| ||||||||||| ||||| | |||||||| | || ||||||||||||||| || || ||| ||||||    
T  19892319 atattgcatattatatgtaggggtcggggttcgaaccccggacactccacttctccacaatttaattgtgagagctctagccactaggctactt 19892226  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 26347408 - 26347524
Alignment:
Q  103 tgaactaagcttagttaatagatatattgtatattatatg-taggatcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctc 200  Q
    |||||| |||| ||||  |||| ||||||||||||||||| | || |||  |||| |||||||||||| | |||||||| | || |||||||| ||||||    
T  26347408 tgaacttagctcagttggtagagatattgtatattatatgttgggctcgatgttcaaaccccagacactccacttctccacaatttaattgtgtgagctc 26347507  T
Q  201 aagtcattagactactt 217  Q
     || || ||||||||||    
T  26347508 tagccactagactactt 26347524  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 29257005 - 29256940
Alignment:
Q  151 gagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactact 216  Q
    |||||||||||||||||||||  ||||||| ||| |||||||| ||||||  |||| |||||||||    
T  29257005 gagttcgaaccccagacaccccgcttctccacatttaattgtgtgagctccggtcactagactact 29256940  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 38433343 - 38433386
Alignment:
Q  134 tattatatgtagga-tcggagttcgaaccccagacaccctactt 176  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  38433343 tattatatgtaggagtcggagttcgaaccccagacaccccactt 38433386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 44568267 - 44568168
Alignment:
Q  121 tagatatattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactacttaa 219  Q
    |||| |||||| |||||||||| |||  |||| |||||||| | |||||||  ||||||||  || |||||||| ||||||||| || ||||||||||||    
T  44568267 tagagatattgcatattatatgcaggggtcggggttcgaactcgagacacctcacttctccatatttaattgtgtgagctcaagccactagactacttaa 44568168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 52798305 - 52798395
Alignment:
Q  126 atattgtatattatatgtaggatcggagttcgaaccccagacaccctacttctccgca-tgtaattgtgagagctcaagtcattagactac 215  Q
    |||||| |||||||||| ||  |||| |||||||||||  |||| | |||||||| || | |||||||| |||||| ||||||||||||||    
T  52798305 atattgcatattatatgcagagtcggggttcgaaccccgtacactccacttctccacaatttaattgtgtgagctctagtcattagactac 52798395  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 46998411 - 46998318
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcatgtaa-ttgtgagagctcaagtcattagactactt 217  Q
    ||||||||||||||||| |||| | || ||||||||||| ||||| | |||||||| ||  ||| ||||| |||||| || |||||||||||||    
T  46998411 atattgtatattatatgcaggagccggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccattagactactt 46998318  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 2629629 - 2629697
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactact 216  Q
    |||| |||||||||||  |||||| |||||||| ||| |||||||| |||||| || |||||| |||||    
T  2629629 tcggggttcgaaccccgaacaccccacttctccacatttaattgtgtgagctctagccattaggctact 2629697  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 176
Target Start/End: Complemental strand, 40666866 - 40666838
Alignment:
Q  148 tcggagttcgaaccccagacaccctactt 176  Q
    |||||||||||||||||||||||||||||    
T  40666866 tcggagttcgaaccccagacaccctactt 40666838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 43905757 - 43905829
Alignment:
Q  145 ggatcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactactt 217  Q
    ||||||| ||||||||||| ||||||| |||||||| | | |||||||| |||||| || || ||| ||||||    
T  43905757 ggatcggggttcgaaccccggacaccccacttctccacgtttaattgtgtgagctctagccactaggctactt 43905829  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 46582382 - 46582342
Alignment:
Q  126 atattgtatattatatgtaggatcggagttcgaaccccaga 166  Q
    |||||| ||||||||||||||||||| |||||||| |||||    
T  46582382 atattgcatattatatgtaggatcggggttcgaactccaga 46582342  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 18223760 - 18223705
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctcc 180  Q
    |||||| |||||||||||| |||| |||||||||||||| ||||||| ||||||||    
T  18223760 atattgcatattatatgtaagatccggagttcgaaccccggacaccccacttctcc 18223705  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 31769555 - 31769500
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||| |||||||||| |||| |||| ||||||||||||||||| ||||||||||    
T  31769555 atattgcatattatatgcaggagtcggggttcgaaccccagacactctacttctcc 31769500  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 3392494 - 3392547
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttct 178  Q
    |||||| ||||||||||||||  |||| ||||||||||||||||||| ||||||    
T  3392494 atattgcatattatatgtaggggtcggggttcgaaccccagacaccccacttct 3392547  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000006; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 40363114 - 40363039
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||||| ||||||||||||||  |||| ||||||||||| ||||| ||||||||||  || |||||||| ||||||    
T  40363114 atattgcatattatatgtaggggtcggggttcgaacccccgacactctacttctccatatttaattgtgtgagctc 40363039  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 29449503 - 29449568
Alignment:
Q  153 gttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactt 217  Q
    ||||||||||||||||| |||||||||| | ||  ||||||| |||||| || |||||||||||||    
T  29449503 gttcgaaccccagacactctacttctccacaattaaattgtgtgagctctagccattagactactt 29449568  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 3596300 - 3596352
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||| ||||||||||| ||||||| |||||||| ||| |||||||| ||||||    
T  3596300 tcggggttcgaaccccggacaccccacttctccacatttaattgtgtgagctc 3596352  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 4659435 - 4659527
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||||||||||||| ||||  | || |||||||| || ||||||| |||||||| ||| ||  |||| |||||| || |||||||||||||    
T  4659435 atattgtatattatatataggggctggggttcgaactccggacaccccacttctccacatttatatgtgtgagctctagccattagactactt 4659527  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 180
Target Start/End: Original strand, 13773430 - 13773482
Alignment:
Q  129 ttgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctcc 180  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| | ||||||||    
T  13773430 ttgtatattatatgtaggagtcggggttcgaaccccggacactccacttctcc 13773482  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 30390412 - 30390336
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctc 200  Q
    |||||| |||||||||| |||| | || ||||||||||| |||||||||||||||| | || |||||||| ||||||    
T  30390412 atattgcatattatatgcaggagccggggttcgaaccccggacaccctacttctccacaatttaattgtgtgagctc 30390336  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 30392875 - 30392831
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacac 169  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||    
T  30392875 atattgcatattatatgtaggagtcggggttcgaaccccagacac 30392831  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 34149716 - 34149668
Alignment:
Q  133 atattatatgtag-gatcggagttcgaaccccagacaccctacttctcc 180  Q
    |||||||||| || |||||| ||||||||||| ||||||||||||||||    
T  34149716 atattatatgcagtgatcggggttcgaaccccggacaccctacttctcc 34149668  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 4057 - 3964
Alignment:
Q  126 atattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||| |||||||||| |||| |||| ||||||||||||||||| | |||||||| | || |||||||| |||||| || || ||| ||||||    
T  4057 atattgcatattatatgcaggagtcggggttcgaaccccagacactccacttctccacaatttaattgtgtgagctctagccactaggctactt 3964  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 28836 - 28779
Alignment:
Q  153 gttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattag 210  Q
    ||||||||||| ||||||| |||||||| ||| |||||||| |||||| || ||||||    
T  28836 gttcgaaccccggacaccccacttctccacatttaattgtgtgagctccagccattag 28779  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000009; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 5683809 - 5683862
Alignment:
Q  153 gttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtca 206  Q
    |||||||||||||||||||||||||||| ||| ||  |||| |||||| |||||    
T  5683809 gttcgaaccccagacaccctacttctccacatttatatgtgtgagctctagtca 5683862  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 5332938 - 5333038
Alignment:
Q  121 tagatatattgtatattatatgtagga-tcggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctcaagtcattagactactta 218  Q
    |||| ||||| ||||||||||| |||| |||| ||||||||||| ||||| | |||||||| | ||  ||||||| |||||| || || |||||||||||    
T  5332938 tagagatattatatattatatgcaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctctagccactagactactta 5333037  T
Q  219 a 219  Q
    |    
T  5333038 a 5333038  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 22274654 - 22274562
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactactt 217  Q
    |||||| |||||||||| |||| | || ||||||||||| ||||||| |||||||| ||  |||||||| |||||| || || ||| ||||||    
T  22274654 atattgcatattatatgcaggagccggggttcgaaccccggacaccccacttctccacaattaattgtgtgagctctagccactaggctactt 22274562  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 24458344 - 24458436
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctcaagtcattagactactt 217  Q
    ||||||||||||||||| |||  | || ||||||||||| || || | |||||||| ||| |||||||| |||||| || || ||||||||||    
T  24458344 atattgtatattatatgcaggggccggggttcgaaccccggatactcaacttctccacatttaattgtgtgagctctagccactagactactt 24458436  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 25824922 - 25824870
Alignment:
Q  148 tcggagttcgaaccccagacaccctacttctccgcatgtaattgtgagagctc 200  Q
    |||| ||||||||||||||||||| |||||||  ||| |||||||| ||||||    
T  25824922 tcggggttcgaaccccagacaccccacttctcaacatataattgtgtgagctc 25824870  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 38283179 - 38283219
Alignment:
Q  153 gttcgaaccccagacaccctacttctccgcatgtaattgtg 193  Q
    ||||||||||||||||||| |||||||| ||| ||||||||    
T  38283179 gttcgaaccccagacaccccacttctccacatttaattgtg 38283219  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 42035363 - 42035439
Alignment:
Q  126 atattgtatattatatgtaggatc-ggagttcgaaccccagacaccctacttctccgc-atgtaattgtgagagctc 200  Q
    ||||||||||||||||| |||  | || ||||||||||||||||| |||||||||| | || |||||||| ||||||    
T  42035363 atattgtatattatatgcaggggctggggttcgaaccccagacactctacttctccacaatttaattgtgtgagctc 42035439  T

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