View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13961_low_4 (Length: 394)
Name: NF13961_low_4
Description: NF13961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13961_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 26 - 383
Target Start/End: Original strand, 32320753 - 32321111
Alignment:
| Q |
26 |
taacatgatgctctaagcctatcgagactaaaattgtgtttaatttgcaaaatagtaaaataatnnnnnnnncagtatacaatggtacatgatagtcctt |
125 |
Q |
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| T |
32320753 |
taacatgatgctctaagcctatcgagactaaaattgtgtttaatttgcaaaatagtaaaataatgaaaaaaacagtatacaatagtacatgatagtcctt |
32320852 |
T |
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| Q |
126 |
tggacaaaaaattgtcttagtgagagacaaaaatttctatttttgtctaacctcttgctacttatttttgtcccattcttgcaacttgttttgtcaagtc |
225 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32320853 |
tggacaaaaaattgtctcagtgagagacaaaaatttctatttttgtctaacctcttgctacttatttttgtcccattcttgcaacttgttttgtcagttc |
32320952 |
T |
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| Q |
226 |
ccataatccatttctaaatcaaatgaagtac-aaaaaatgttgtgtccaatctgatgtttttaaacaaatcaaacgcccaagaggaaaaccaaaaattat |
324 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32320953 |
ccataatccatttctaaatcaaatgaagtacaaaaaaatgttgtgtccaatctgatgtttttaaacaaatcaaacgcccaagaggaaaaccaaaaattat |
32321052 |
T |
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| Q |
325 |
tatgcgtacaaattcctttaatatttttgtctagttaaactagttttttgaatatgtat |
383 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32321053 |
tatgcgtacaaattcctttaatatttttgtctagttaaactagttttttgaatatgtat |
32321111 |
T |
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