View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13961_low_7 (Length: 270)
Name: NF13961_low_7
Description: NF13961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13961_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 253
Target Start/End: Original strand, 37717061 - 37717304
Alignment:
| Q |
10 |
ataatactcctctttgaagtataaattaagaagatataaattacctatatctgaactattgactaggatcgaaaaatcacgaccatcatcttgctcctct |
109 |
Q |
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| T |
37717061 |
ataatactcctctttgaagtataaattaagaagatataaattacctatatctgaactattgactaggatcgaaaaatcacgaccatcatcttgctcctct |
37717160 |
T |
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| Q |
110 |
tgaagtgtaggtaattgtcgtgtccatatccaacaagaaaagtaactacgatcattatatgtagctttatatgaataagcattgcacgaacacttgttaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37717161 |
tgaagtgtaggtaattgtcgtgtccatatccaacaagaaaagtaactacgatcattatatgtagctttatatgaataagcattgcacgaacacttgttaa |
37717260 |
T |
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| Q |
210 |
ggcataaagattgacaatctgcttttgtttcagatgagaatcct |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37717261 |
ggcataaagattgacaatctgcttttgtttcagatgagaatcct |
37717304 |
T |
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